Chy4G074820 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCTCATTTGTATACAATTCCACCAAGGTCCACTTGACATGTACAGATCAACATATACTTGAAAAAAATAAATAAATATAGTTGAAGATTGAAAATTAGAATATTTGAAAACAATTTAATTAATTTATTATTAGGAAATAAGTTAAAATAGAGTTCTATACATAAACATTAATATTAAAATCAAAATGAACTTTTTCAACTCTATTTTATGGAGTTACATTACATCAAAGCTGGCTCTTAGCATATATATATTGAAGGGCATATATGATAATCTAATTATTAATGTATGTTATTATCTATATAATATGTTAATACAAACAACAGTGTTTATACACACATAATTTGTGCCTAATTCTAGTTCTCTTCTCATCAGCTTCTTCTCTCTATTTCTATACCTTAGTTGCACAAAAACTGAAAACACAATGGCTGGAAGCTATGAGGATCATCAGGAAGAACTAGGGCGCTGTGGGATTCAGTTTCGGAGGCGGCGAAGAATGGCAGTGGCACGACTTGGGGGGAAGAGATCGGGACGGATCGTGGCGTGGGGGAGGATAGTGAGGAAGATAAGACTGAAATGGGTGAAGATGAAATGCATAGAGATGGTGAAGAAGATGAAAAAATACTACAAAGAGTTGATGAAGGATATAATGGAAGCAGGAGCTTATGGATATGCTGACTCATATCAACATAGGCTTCTTTTGGAGACTTCTTTTGCTATTCCAATTCTGGGTGTCTCTCTTTCTACTCATTCTAGTATTCATGCTGCTAGAGCTGCTACTTCATAA ATGGCTCCTCATTTGTATACAATTCCACCAAGTTGCACAAAAACTGAAAACACAATGGCTGGAAGCTATGAGGATCATCAGGAAGAACTAGGGCGCTGTGGGATTCAGTTTCGGAGGCGGCGAAGAATGGCAGTGGCACGACTTGGGGGGAAGAGATCGGGACGGATCGTGGCGTGGGGGAGGATAGTGAGGAAGATAAGACTGAAATGGGTGAAGATGAAATGCATAGAGATGGTGAAGAAGATGAAAAAATACTACAAAGAGTTGATGAAGGATATAATGGAAGCAGGAGCTTATGGATATGCTGACTCATATCAACATAGGCTTCTTTTGGAGACTTCTTTTGCTATTCCAATTCTGGGTGTCTCTCTTTCTACTCATTCTAGTATTCATGCTGCTAGAGCTGCTACTTCATAA ATGGCTCCTCATTTGTATACAATTCCACCAAGTTGCACAAAAACTGAAAACACAATGGCTGGAAGCTATGAGGATCATCAGGAAGAACTAGGGCGCTGTGGGATTCAGTTTCGGAGGCGGCGAAGAATGGCAGTGGCACGACTTGGGGGGAAGAGATCGGGACGGATCGTGGCGTGGGGGAGGATAGTGAGGAAGATAAGACTGAAATGGGTGAAGATGAAATGCATAGAGATGGTGAAGAAGATGAAAAAATACTACAAAGAGTTGATGAAGGATATAATGGAAGCAGGAGCTTATGGATATGCTGACTCATATCAACATAGGCTTCTTTTGGAGACTTCTTTTGCTATTCCAATTCTGGGTGTCTCTCTTTCTACTCATTCTAGTATTCATGCTGCTAGAGCTGCTACTTCATAA MAPHLYTIPPSCTKTENTMAGSYEDHQEELGRCGIQFRRRRRMAVARLGGKRSGRIVAWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIHAARAATS* Homology
BLAST of Chy4G074820 vs. ExPASy TrEMBL
Match: A0A0A0LBW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G644780 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 6.9e-56 Identity = 117/120 (97.50%), Postives = 117/120 (97.50%), Query Frame = 0
BLAST of Chy4G074820 vs. ExPASy TrEMBL
Match: A0A5D3DCV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45855G00010 PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 3.3e-50 Identity = 111/121 (91.74%), Postives = 115/121 (95.04%), Query Frame = 0
BLAST of Chy4G074820 vs. ExPASy TrEMBL
Match: A0A6J1GAR0 (uncharacterized protein LOC111452314 OS=Cucurbita moschata OX=3662 GN=LOC111452314 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.8e-33 Identity = 85/105 (80.95%), Postives = 93/105 (88.57%), Query Frame = 0
BLAST of Chy4G074820 vs. ExPASy TrEMBL
Match: A0A6J1GVZ8 (uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC111458050 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 8.3e-33 Identity = 82/102 (80.39%), Postives = 92/102 (90.20%), Query Frame = 0
BLAST of Chy4G074820 vs. ExPASy TrEMBL
Match: A0A6J1D3L4 (uncharacterized protein LOC111016963 OS=Momordica charantia OX=3673 GN=LOC111016963 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22 Identity = 68/118 (57.63%), Postives = 86/118 (72.88%), Query Frame = 0
BLAST of Chy4G074820 vs. NCBI nr
Match: XP_011652825.1 (uncharacterized protein LOC105435118 [Cucumis sativus] >KGN58439.1 hypothetical protein Csa_000856 [Cucumis sativus]) HSP 1 Score: 224 bits (572), Expect = 2.34e-73 Identity = 117/120 (97.50%), Postives = 117/120 (97.50%), Query Frame = 0
BLAST of Chy4G074820 vs. NCBI nr
Match: KAA0053479.1 (uncharacterized protein E6C27_scaffold190G00270 [Cucumis melo var. makuwa] >TYK21501.1 uncharacterized protein E5676_scaffold45855G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 206 bits (523), Expect = 7.12e-66 Identity = 111/121 (91.74%), Postives = 115/121 (95.04%), Query Frame = 0
BLAST of Chy4G074820 vs. NCBI nr
Match: XP_038891072.1 (uncharacterized protein LOC120080455 [Benincasa hispida]) HSP 1 Score: 159 bits (402), Expect = 2.10e-47 Identity = 93/120 (77.50%), Postives = 100/120 (83.33%), Query Frame = 0
BLAST of Chy4G074820 vs. NCBI nr
Match: XP_022948735.1 (uncharacterized protein LOC111452314 [Cucurbita moschata] >XP_023523769.1 uncharacterized protein LOC111787905 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 150 bits (378), Expect = 8.84e-44 Identity = 90/129 (69.77%), Postives = 101/129 (78.29%), Query Frame = 0
BLAST of Chy4G074820 vs. NCBI nr
Match: KAG7018218.1 (hypothetical protein SDJN02_20086, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 149 bits (376), Expect = 1.53e-43 Identity = 85/118 (72.03%), Postives = 98/118 (83.05%), Query Frame = 0
BLAST of Chy4G074820 vs. TAIR 10
Match: AT1G54120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14060.1); Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.1 bits (144), Expect = 1.7e-09 Identity = 40/102 (39.22%), Postives = 67/102 (65.69%), Query Frame = 0
BLAST of Chy4G074820 vs. TAIR 10
Match: AT3G14060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 56.2 bits (134), Expect = 2.4e-08 Identity = 36/90 (40.00%), Postives = 59/90 (65.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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