Chy4G074600 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G074600
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Plant transposase
Location	chrH04: 9226847 .. 9228071 (-)
RNA-Seq Expression	Chy4G074600
Synteny	Chy4G074600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTTGAAATGAAAGTAAATGTAAAGTACAACAAATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTTCTGGGTACGCTAGTTAGAGAAGTGGTGCTAGTGAATGTTGAAACTTGGAAGAAACTTTCTACTCGACAAAAAGAAATATTGTGGCATTCTATTTAAGTATGTAATTTATAATTATATATTTATATAATGAGTATAATTTGAGCTTTCTTATATGATCACTACCTAAATGATTTTATTCTTTAGGCACGATATAATGTTGATGAATGCCAAAAGAAACATTTATTCCAAAAGATGGGTGGATTGTGGAGAACAAGCAAATCTCGCCTAGTGAGTAAGATTGGGGAAGCTTCAAATGACAATGAGTTGAATAAACTCAAGCCAGATAACATTTCTTCAATGCATGATTGGAATGACTTCGTCAAACATAAAACCAGTGCAGCATTCGAGGTATGTTTGTAGTATGAAAGTTTGTGGCATTTATTTATTTGGTTCAAGGTATGGAAACAAGTTTAGTGTTAACCTTTATTGATATCTCATTGAGTATGATTTTCAAGCAAAAAGCAAGAAATTTAAAGATATGAAAAAAAAAGCAACTTCCTCACACATCTAGTCATAGAGGCTATACTCGACTAGCTGAAGATTTGGTATAATTTTATGTAATTAGTGACATTATTATATTTAGCACATATAGCTAATATATAACTAACTATTGTGTTTCAATGTAGAAAAACTCTTCTTTAACCCCGATTACCCGAGTAAGTGTTTGGACCAAGGCACATGTGAAGAAAGATGGAAAACCTATCAACTCGCAAGTGGCCGATACTCTTGTTGGTTTATCTTTTGTATTTTTTGTTTTTGTTTTTATTTTTGTATAGTTGCTGCCATTTGAGTACTGAACTGCCATTTGAATATAGTTGCTGCCATTTGAATATAGTTGCTGCAATGTTGTGACTTTATAGTTGTTGCCCAGAAGAGTGCCTTGTGTGGTATTCGAGTAGCTTTGTTGAGTGAGTTAAGAGGTTCCAAAGCAGTAGTGACAGCGGAGGATTTAGGAAGTCTCTTAGCTCTATTTCAGGTCCGGTCTTGTCTAGTAGCTGAGATTGTGAGAAGACAGTCAGAAGACAGTAATTTACAAAAAAAGCTTGGAAAATCCAAGAAAGGCATGGAGTTGGAGTTTGAACCGAGAACATATGGAGCCATT

mRNA sequence

ATGGATCTTGAAATGAAAGTAAATGTAAAGTACAACAAATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTTCTGGGTACGCTAGTTAGAGAAGTGGTGCTAGCACGATATAATGTTGATGAATGCCAAAAGAAACATTTATTCCAAAAGATGGGTGGATTGTGGAGAACAAGCAAATCTCGCCTAGTGAGTAAGATTGGGGAAGCTTCAAATGACAATGAGTTGAATAAACTCAAGCCAGATAACATTTCTTCAATGCATGATTGGAATGACTTCGTCAAACATAAAACCAGTGCAGCATTCGAGAAAAACTCTTCTTTAACCCCGATTACCCGAGTAAGTGTTTGGACCAAGGCACATGTGAAGAAAGATGGAAAACCTATCAACTCGCAAGTGGCCGATACTCTTGTTGGTTTATCTTTTGTCCGGTCTTGTCTAGTAGCTGAGATTGTGAGAAGACAGTCAGAAGACAGTAATTTACAAAAAAAGCTTGGAAAATCCAAGAAAGGCATGGAGTTGGAGTTTGAACCGAGAACATATGGAGCCATT

Coding sequence (CDS)

ATGGATCTTGAAATGAAAGTAAATGTAAAGTACAACAAATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTTCTGGGTACGCTAGTTAGAGAAGTGGTGCTAGCACGATATAATGTTGATGAATGCCAAAAGAAACATTTATTCCAAAAGATGGGTGGATTGTGGAGAACAAGCAAATCTCGCCTAGTGAGTAAGATTGGGGAAGCTTCAAATGACAATGAGTTGAATAAACTCAAGCCAGATAACATTTCTTCAATGCATGATTGGAATGACTTCGTCAAACATAAAACCAGTGCAGCATTCGAGAAAAACTCTTCTTTAACCCCGATTACCCGAGTAAGTGTTTGGACCAAGGCACATGTGAAGAAAGATGGAAAACCTATCAACTCGCAAGTGGCCGATACTCTTGTTGGTTTATCTTTTGTCCGGTCTTGTCTAGTAGCTGAGATTGTGAGAAGACAGTCAGAAGACAGTAATTTACAAAAAAAGCTTGGAAAATCCAAGAAAGGCATGGAGTTGGAGTTTGAACCGAGAACATATGGAGCCATT

Protein sequence

MDLEMKVNVKYNKYGQPIGETSVGLSSFLGTLVREVVLARYNVDECQKKHLFQKMGGLWRTSKSRLVSKIGEASNDNELNKLKPDNISSMHDWNDFVKHKTSAAFEKNSSLTPITRVSVWTKAHVKKDGKPINSQVADTLVGLSFVRSCLVAEIVRRQSEDSNLQKKLGKSKKGMELEFEPRTYGAI

Homology

[Close]

BLAST of Chy4G074600 vs. ExPASy TrEMBL
Match: A0A5A7SRN7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00120 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 4.3e-53
Identity = 120/192 (62.50%), Postives = 128/192 (66.67%), Query Frame = 0


Query: 1   MDLEMKVNVKYNKYGQPIGETSVGLSSFLGTLVREVV----------------------L 60
           M+ EMK++++YN YGQPIGETSVGLSSFLGTLVREVV                       
Sbjct: 119 MEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

Query: 61  ARYNVDECQKKHLFQKMGGLWRTSKSRLVSKIGEASNDNELNKLKPDNISSMHDWNDFVK 120
           ARYNVDE QKK LFQKMGGLWR SKSRLVSKIGEASND ELNKLKPDNISSMHDWNDF+K
Sbjct: 179 ARYNVDEWQKKFLFQKMGGLWRASKSRLVSKIGEASNDEELNKLKPDNISSMHDWNDFIK 238

Query: 121 HKTSAAFE------------------------------KNSSLTPITRVSVWTKAHVKKD 141
           HKTSA F+                              K SS TPITRV VWTKAHVKKD
Sbjct: 239 HKTSATFKAKSKKFKDMKQKQLPHTCSRRGYARLAEDLKKSSSTPITRVDVWTKAHVKKD 298

[Close]

BLAST of Chy4G074600 vs. ExPASy TrEMBL
Match: A0A5A7UBP2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G00210 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.8e-52
Identity = 118/192 (61.46%), Postives = 128/192 (66.67%), Query Frame = 0


Query: 1   MDLEMKVNVKYNKYGQPIGETSVGLSSFLGTLVREVV----------------------L 60
           M+ EMK++++YN YGQPIGETSVGLSSFLGTLVREVV                       
Sbjct: 119 MEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

Query: 61  ARYNVDECQKKHLFQKMGGLWRTSKSRLVSKIGEASNDNELNKLKPDNISSMHDWNDFVK 120
           A+YNVDE QKK LFQKMGGLWR SKSRLVSKIGEASND EL+KLKPDNISSMHDWNDF+K
Sbjct: 179 AQYNVDEWQKKFLFQKMGGLWRASKSRLVSKIGEASNDEELSKLKPDNISSMHDWNDFIK 238

Query: 121 HKTSAAFE------------------------------KNSSLTPITRVSVWTKAHVKKD 141
           HKTSA F+                              K SS TPITRV VWTKAHVKKD
Sbjct: 239 HKTSATFKAKSKKFKDMKQKQLPHTCSHRGYARLAEDLKKSSSTPITRVDVWTKAHVKKD 298

[Close]

BLAST of Chy4G074600 vs. ExPASy TrEMBL
Match: A0A5A7UVF2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003770 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.1e-51
Identity = 118/192 (61.46%), Postives = 126/192 (65.62%), Query Frame = 0


Query: 1   MDLEMKVNVKYNKYGQPIGETSVGLSSFLGTLVREVV----------------------L 60
           M+ EMK++++YN YGQPIGETSVGLSSFLGTLVREVV                       
Sbjct: 119 MEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETLKKISTRQKEILWHSIQ 178

Query: 61  ARYNVDECQKKHLFQKMGGLWRTSKSRLVSKIGEASNDNELNKLKPDNISSMHDWNDFVK 120
           ARYNVDE QKK LFQKMGGLWR SKSRLVSKIGEASND E NKLKPDNISSMHDWNDF+K
Sbjct: 179 ARYNVDEWQKKFLFQKMGGLWRASKSRLVSKIGEASNDEEFNKLKPDNISSMHDWNDFIK 238

Query: 121 HKTSAAFE------------------------------KNSSLTPITRVSVWTKAHVKKD 141
           HKTSA F+                              K SS T ITRV VWTKAHVKKD
Sbjct: 239 HKTSATFKAKSKKFKDMKQKQLPHTCSRRGYARLAEDLKKSSSTSITRVDVWTKAHVKKD 298

[Close]

BLAST of Chy4G074600 vs. ExPASy TrEMBL
Match: A0A5A7TLJ2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003690 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.8e-51
Identity = 118/192 (61.46%), Postives = 127/192 (66.15%), Query Frame = 0


Query: 1   MDLEMKVNVKYNKYGQPIGETSVGLSSFLGTLVREVV----------------------L 60
           M+ EMK++++YN YGQPIGETSVGLSSFLGTLVREVV                       
Sbjct: 119 MEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

Query: 61  ARYNVDECQKKHLFQKMGGLWRTSKSRLVSKIGEASNDNELNKLKPDNISSMHDWNDFVK 120
           ARYNVDE QKK LFQKMGGLWR SKSRLVSKIG+ASND ELNKLKPDNISSMHDWNDF+K
Sbjct: 179 ARYNVDEWQKKFLFQKMGGLWRASKSRLVSKIGKASNDEELNKLKPDNISSMHDWNDFIK 238

Query: 121 HKTSAAFE------------------------------KNSSLTPITRVSVWTKAHVKKD 141
           HKTSA F+                              K SS T ITRV VWTKAHVKKD
Sbjct: 239 HKTSATFKAKSKTFKDMKQKQLPHTCSRRGYARLAEDLKKSSSTLITRVDVWTKAHVKKD 298

[Close]

BLAST of Chy4G074600 vs. ExPASy TrEMBL
Match: A0A5A7T4T7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00670 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.7e-49
Identity = 106/148 (71.62%), Postives = 118/148 (79.73%), Query Frame = 0


Query: 1   MDLEMKVNVKYNKYGQPIGETSVGLSSFLGTLVREVVLARYNVDECQKKHLFQK------ 60
           M+ EMK++++YN YGQPIGETSVGLSSF GTLVRE+V    NV+  +K    QK      
Sbjct: 119 MEPEMKLDIRYNGYGQPIGETSVGLSSFWGTLVREMV--PVNVETWKKISTRQKEILWHS 178

Query: 61  --MGGLWRTSKSRLVSKIGEASNDNELNKLKPDNISSMHDWNDFVKHKTSAAFEKNSSLT 120
             MGGLWR  KSRLVSKIGEASND ELNKLKPDNISSMHDWNDF+KHKTSA F+KNSS T
Sbjct: 179 IQMGGLWRARKSRLVSKIGEASNDEELNKLKPDNISSMHDWNDFIKHKTSATFKKNSSST 238

Query: 121 PITRVSVWTKAHVKKDGKPINSQVADTL 141
           PITRV +W K HVKKDG P+NSQVADTL
Sbjct: 239 PITRVDIWIKIHVKKDGTPMNSQVADTL 264

[Close]

BLAST of Chy4G074600 vs. NCBI nr
Match: KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (549), Expect = 4.07e-64
Identity = 120/192 (62.50%), Postives = 128/192 (66.67%), Query Frame = 0


Query: 1   MDLEMKVNVKYNKYGQPIGETSVGLSSFLGTLVREVV----------------------L 60
           M+ EMK++++YN YGQPIGETSVGLSSFLGTLVREVV                       
Sbjct: 119 MEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

Query: 61  ARYNVDECQKKHLFQKMGGLWRTSKSRLVSKIGEASNDNELNKLKPDNISSMHDWNDFVK 120
           ARYNVDE QKK LFQKMGGLWR SKSRLVSKIGEASND ELNKLKPDNISSMHDWNDF+K
Sbjct: 179 ARYNVDEWQKKFLFQKMGGLWRASKSRLVSKIGEASNDEELNKLKPDNISSMHDWNDFIK 238

Query: 121 HKTSAAFE------------------------------KNSSLTPITRVSVWTKAHVKKD 140
           HKTSA F+                              K SS TPITRV VWTKAHVKKD
Sbjct: 239 HKTSATFKAKSKKFKDMKQKQLPHTCSRRGYARLAEDLKKSSSTPITRVDVWTKAHVKKD 298

[Close]

BLAST of Chy4G074600 vs. NCBI nr
Match: KAA0051001.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 213 bits (541), Expect = 2.90e-63
Identity = 120/207 (57.97%), Postives = 133/207 (64.25%), Query Frame = 0


Query: 1   MDLEMKVNVKYNKYGQPIGETSVGLSSFLGTLVREVV----------------------L 60
           M+ EMK++++YN YGQPIGETSVGLSSFLGTLVREVV                       
Sbjct: 119 MEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

Query: 61  ARYNVDECQKKHLFQKMGGLWRTSKSRLVSKIGEASNDNELNKLKPDNISSMHDWNDFVK 120
           A+YNVDE QKK LFQKMGGLWR SKSRLVSKIGEASND EL+KLKPDNISSMHDWNDF+K
Sbjct: 179 AQYNVDEWQKKFLFQKMGGLWRASKSRLVSKIGEASNDEELSKLKPDNISSMHDWNDFIK 238

Query: 121 HKTSAAFE------------------------------KNSSLTPITRVSVWTKAHVKKD 155
           HKTSA F+                              K SS TPITRV VWTKAHVKKD
Sbjct: 239 HKTSATFKAKSKKFKDMKQKQLPHTCSHRGYARLAEDLKKSSSTPITRVDVWTKAHVKKD 298

[Close]

BLAST of Chy4G074600 vs. NCBI nr
Match: KAA0057491.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 211 bits (537), Expect = 2.46e-62
Identity = 118/192 (61.46%), Postives = 126/192 (65.62%), Query Frame = 0


Query: 1   MDLEMKVNVKYNKYGQPIGETSVGLSSFLGTLVREVV----------------------L 60
           M+ EMK++++YN YGQPIGETSVGLSSFLGTLVREVV                       
Sbjct: 119 MEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETLKKISTRQKEILWHSIQ 178

Query: 61  ARYNVDECQKKHLFQKMGGLWRTSKSRLVSKIGEASNDNELNKLKPDNISSMHDWNDFVK 120
           ARYNVDE QKK LFQKMGGLWR SKSRLVSKIGEASND E NKLKPDNISSMHDWNDF+K
Sbjct: 179 ARYNVDEWQKKFLFQKMGGLWRASKSRLVSKIGEASNDEEFNKLKPDNISSMHDWNDFIK 238

Query: 121 HKTSAAFE------------------------------KNSSLTPITRVSVWTKAHVKKD 140
           HKTSA F+                              K SS T ITRV VWTKAHVKKD
Sbjct: 239 HKTSATFKAKSKKFKDMKQKQLPHTCSRRGYARLAEDLKKSSSTSITRVDVWTKAHVKKD 298

[Close]

BLAST of Chy4G074600 vs. NCBI nr
Match: KAA0042856.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 210 bits (535), Expect = 2.63e-61
Identity = 118/192 (61.46%), Postives = 127/192 (66.15%), Query Frame = 0


Query: 1   MDLEMKVNVKYNKYGQPIGETSVGLSSFLGTLVREVV----------------------L 60
           M+ EMK++++YN YGQPIGETSVGLSSFLGTLVREVV                       
Sbjct: 119 MEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

Query: 61  ARYNVDECQKKHLFQKMGGLWRTSKSRLVSKIGEASNDNELNKLKPDNISSMHDWNDFVK 120
           ARYNVDE QKK LFQKMGGLWR SKSRLVSKIG+ASND ELNKLKPDNISSMHDWNDF+K
Sbjct: 179 ARYNVDEWQKKFLFQKMGGLWRASKSRLVSKIGKASNDEELNKLKPDNISSMHDWNDFIK 238

Query: 121 HKTSAAFE------------------------------KNSSLTPITRVSVWTKAHVKKD 140
           HKTSA F+                              K SS T ITRV VWTKAHVKKD
Sbjct: 239 HKTSATFKAKSKTFKDMKQKQLPHTCSRRGYARLAEDLKKSSSTLITRVDVWTKAHVKKD 298

[Close]

BLAST of Chy4G074600 vs. NCBI nr
Match: KAA0036561.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 204 bits (518), Expect = 7.83e-61
Identity = 106/148 (71.62%), Postives = 118/148 (79.73%), Query Frame = 0


Query: 1   MDLEMKVNVKYNKYGQPIGETSVGLSSFLGTLVREVVLARYNVDECQKKHLFQK------ 60
           M+ EMK++++YN YGQPIGETSVGLSSF GTLVRE+V    NV+  +K    QK      
Sbjct: 119 MEPEMKLDIRYNGYGQPIGETSVGLSSFWGTLVREMVPV--NVETWKKISTRQKEILWHS 178

Query: 61  --MGGLWRTSKSRLVSKIGEASNDNELNKLKPDNISSMHDWNDFVKHKTSAAFEKNSSLT 120
             MGGLWR  KSRLVSKIGEASND ELNKLKPDNISSMHDWNDF+KHKTSA F+KNSS T
Sbjct: 179 IQMGGLWRARKSRLVSKIGEASNDEELNKLKPDNISSMHDWNDFIKHKTSATFKKNSSST 238

Query: 121 PITRVSVWTKAHVKKDGKPINSQVADTL 140
           PITRV +W K HVKKDG P+NSQVADTL
Sbjct: 239 PITRVDIWIKIHVKKDGTPMNSQVADTL 264

The following BLAST results are available for this feature:

BLAST of Chy4G074600 vs.


Match Name	E-value	Identity	Description

BLAST of Chy4G074600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SRN7	4.3e-53	62.50	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00...	[more]
A0A5A7UBP2	4.8e-52	61.46	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G0...	[more]
A0A5A7UVF2	1.1e-51	61.46	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G00...	[more]
A0A5A7TLJ2	1.8e-51	61.46	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003...	[more]
A0A5A7T4T7	1.7e-49	71.62	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00...	[more]

BLAST of Chy4G074600 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032201.1	4.07e-64	62.50	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0051001.1	2.90e-63	57.97	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0057491.1	2.46e-62	61.46	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0042856.1	2.63e-61	61.46	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0036561.1	7.83e-61	71.62	Plant transposase [Cucumis melo var. makuwa]	[more]

BLAST of Chy4G074600 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33144:SF27	SUBFAMILY NOT NAMED	coord: 6..106
None	No IPR available	PANTHER	PTHR33144	OS10G0409366 PROTEIN-RELATED	coord: 6..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G074600.1	Chy4G074600.1	mRNA