Chy4G074110 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGTTCTTCAAGAGCACCAAAACACACATAGATTAAAAGAGGAAGAAGCAAAACTGGTTGAGTGCTTGGTGGAATTGGTTTCATCTGGTGGATGGTGATCGGATAATGGGACATTTCGACCTGGGTACTTGGCCCAATTACAACGGATGATGGCAAAGAAGTTGCCCGACACTAGTATCAAGGATTGTCATGTGAAATCCTTTAAAAAAACCTACCAAGCAATTGCAAAAATGAGGGGACCATCGTGTAGTGGCTTTGGATGGAACGAAGAATATCAATGCATCATTGCAGAACGACAGTTGTTTGATAGTTGGGTCAAGGTATTAATTTCACAGTACAATTTTATGTACTTTTATAATCCCAATCATCAACTAATCTATCTGAATTATGTTTGTACAGAGTCATCCTGCAGCCAAAGGCCTTCTACATAAATCATTTTCATGTTATGCTAAACGTTTAGAGACCTTTGCTGATGTCTGATCTAATGTGCATTACAATTTTAATGATGGTGTTTCCCTCGGTGATTCACATGATCAAGACATCCCGACGATGTATAGCCAAGGACTGCATATGTCACCAGTTGAGATGATAGGAACACGTGAAGGTCGATCAGGTGAAGGAAGAAATTGTTCAAGTGGAAGAGAAAATGGGGTGGCAAACATTATGAGGAGATAGATGTGATCAGTAATGCAATGGAAGTTAGAAATGATCAATTAAAGACAATTTCAAATTGGCCGAAAGAAAAGCGTGCAATAGACATCGAATTATGTGTTGAAGGTGGGAAACAGTTGCAAGATATCCCTGAACTACAGAGCCGAGACAGGGTAAAGCTTATGCAAATCATATTCCATAGGGTGGATGACATAGAGGGATTCTTGTCGTGTCCAATAGAACTTAAATTGGAGTATTGCAAGGTTCTCTTGGAAGATAATGTTTGA ATGGCAAGTTCTTCAAGAGCACCAAAACACACATAGATTAAAAGAGGAAGAAGCAAAACTGGTTGAGTGCTTGGTGGAATTGGTTTCATCTGGTGGATGGTGATCGGATAATGGGACATTTCGACCTGGGTACTTGGCCCAATTACAACGGATGATGGCAAAGAAGTTGCCCGACACTAGTATCAAGGATTGTCATGTGAAATCCTTTAAAAAAACCTACCAAGCAATTGCAAAAATGAGGGGACCATCGTGTAGTGGCTTTGGATGGAACGAAGAATATCAATGCATCATTGCAGAACGACAGTTGTTTGATAGTTGGGTCAAGAGTCATCCTGCAGCCAAAGGCCTTCTACATAAATCATTTTCATGTTATGCTAAACGTTTAGAGACCTTTGCTGATGTCTGATCTAATGTGCATGATCAAGACATCCCGACGATGTATAGCCAAGGACTGCATATGTCACCAGTTGAGATGATAGGAACACGTGAAGGTCGATCAGGTGAAGGAAGAAATTGTTCAAGTGGAAGAGAAAATGGGGTGGCAAACATTATGAGGAGATAGATGTGATCAGTAATGCAATGGAAGTTAGAAATGATCAATTAAAGACAATTTCAAATTGGCCGAAAGAAAAGCGTGCAATAGACATCGAATTATGTGTTGAAGGTGGGAAACAGTTGCAAGATATCCCTGAACTACAGAGCCGAGACAGGGTAAAGCTTATGCAAATCATATTCCATAGGGTGGATGACATAGAGGGATTCTTGTCGTGTCCAATAGAACTTAAATTGGAGTATTGCAAGGTTCTCTTGGAAGATAATGTTTGA ATGGCAAGTTCTTCAAGAGCACCAAAACACACATAGATTAAAAGAGGAAGAAGCAAAACTGGTTGAGTGCTTGGTGGAATTGGTTTCATCTGGTGGATGGTGATCGGATAATGGGACATTTCGACCTGGGTACTTGGCCCAATTACAACGGATGATGGCAAAGAAGTTGCCCGACACTAGTATCAAGGATTGTCATGTGAAATCCTTTAAAAAAACCTACCAAGCAATTGCAAAAATGAGGGGACCATCGTGTAGTGGCTTTGGATGGAACGAAGAATATCAATGCATCATTGCAGAACGACAGTTGTTTGATAGTTGGGTCAAGAGTCATCCTGCAGCCAAAGGCCTTCTACATAAATCATTTTCATGTTATGCTAAACGTTTAGAGACCTTTGCTGATGTCTGATCTAATGTGCATGATCAAGACATCCCGACGATGTATAGCCAAGGACTGCATATGTCACCAGTTGAGATGATAGGAACACGTGAAGGTCGATCAGGTGAAGGAAGAAATTGTTCAAGTGGAAGAGAAAATGGGGTGGCAAACATTATGAGGAGATAGATGTGATCAGTAATGCAATGGAAGTTAGAAATGATCAATTAAAGACAATTTCAAATTGGCCGAAAGAAAAGCGTGCAATAGACATCGAATTATGTGTTGAAGGTGGGAAACAGTTGCAAGATATCCCTGAACTACAGAGCCGAGACAGGGTAAAGCTTATGCAAATCATATTCCATAGGGTGGATGACATAGAGGGATTCTTGTCGTGTCCAATAGAACTTAAATTGGAGTATTGCAAGGTTCTCTTGGAAGATAATGTTTGA MASSSRAPKHT*IKRGRSKTG*VLGGIGFIWWMVIG*WDISTWVLGPITTDDGKEVARH*YQGLSCEIL*KNLPSNCKNEGTIV*WLWMERRISMHHCRTTVV**LGQESSCSQRPST*IIFMLC*TFRDLC*CLI*CA*SRHPDDV*PRTAYVTS*DDRNT*RSIR*RKKLFKWKRKWGGKHYEEIDVISNAMEVRNDQLKTISNWPKEKRAIDIELCVEGGKQLQDIPELQSRDRVKLMQIIFHRVDDIEGFLSCPIELKLEYCKVLLEDNV* Homology
BLAST of Chy4G074110 vs. ExPASy TrEMBL
Match: A0A0A0KFW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G116150 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 1.9e-36 Identity = 78/99 (78.79%), Postives = 87/99 (87.88%), Query Frame = 0
BLAST of Chy4G074110 vs. ExPASy TrEMBL
Match: A0A5D3BZU3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00280 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 2.9e-29 Identity = 66/99 (66.67%), Postives = 81/99 (81.82%), Query Frame = 0
BLAST of Chy4G074110 vs. ExPASy TrEMBL
Match: A0A5D3CT52 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00400 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 1.9e-28 Identity = 65/97 (67.01%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of Chy4G074110 vs. ExPASy TrEMBL
Match: A0A5A7SQU2 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00070 PE=3 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 2.4e-28 Identity = 64/97 (65.98%), Postives = 77/97 (79.38%), Query Frame = 0
BLAST of Chy4G074110 vs. ExPASy TrEMBL
Match: A0A5A7V8C5 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00690 PE=3 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.3e-26 Identity = 61/91 (67.03%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of Chy4G074110 vs. NCBI nr
Match: KAE8646815.1 (hypothetical protein Csa_005367, partial [Cucumis sativus]) HSP 1 Score: 162 bits (410), Expect = 1.56e-46 Identity = 77/98 (78.57%), Postives = 86/98 (87.76%), Query Frame = 0
BLAST of Chy4G074110 vs. NCBI nr
Match: KAA0066604.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK14214.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 137 bits (344), Expect = 1.34e-36 Identity = 65/97 (67.01%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of Chy4G074110 vs. NCBI nr
Match: KAA0031678.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK04432.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 140 bits (352), Expect = 3.97e-36 Identity = 66/99 (66.67%), Postives = 81/99 (81.82%), Query Frame = 0
BLAST of Chy4G074110 vs. NCBI nr
Match: KAA0033290.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK14818.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 136 bits (343), Expect = 6.61e-33 Identity = 64/97 (65.98%), Postives = 77/97 (79.38%), Query Frame = 0
BLAST of Chy4G074110 vs. NCBI nr
Match: KAA0042340.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15465.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 128 bits (322), Expect = 2.56e-32 Identity = 61/97 (62.89%), Postives = 77/97 (79.38%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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