Chy4G073220 (gene) Cucumber (hystrix) v1

Overview
NameChy4G073220
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH04: 6705364 .. 6705594 (+)
RNA-Seq ExpressionChy4G073220
SyntenyChy4G073220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGTTGGTTTGTGCTAGTGATATGTCTGTTAAACTTGGTATTATGGGGGAAATTGGGAGCTATTATGTGTACTTCGGTTTGGATACTGTGTTTGTACCGACGAAGGATGGGATTGAAGAAAGGGAGTGCGGTGGGGATGAGTTCGGGGGAATATTACAAGAGAAGAATCGGGATGGAAGGATTTTTGAAGAGAGAGCGTTCAGGCGCTCAGAATTCAATCTTACGCATTGA

mRNA sequence

CGGTTGGTTTGTGCTAGTGATATGTCTGTTAAACTTGGTATTATGGGGGAAATTGGGAGCTATTATGTGTACTTCGGTTTGGATACTGTGTTTGTACCGACGAAGGATGGGATTGAAGAAAGGGAGTGCGGTGGGGATGAGTTCGGGGGAATATTACAAGAGAAGAATCGGGATGGAAGGATTTTTGAAGAGAGAGCGTTCAGGCGCTCAGAATTCAATCTTACGCATTGA

Coding sequence (CDS)

CGGTTGGTTTGTGCTAGTGATATGTCTGTTAAACTTGGTATTATGGGGGAAATTGGGAGCTATTATGTGTACTTCGGTTTGGATACTGTGTTTGTACCGACGAAGGATGGGATTGAAGAAAGGGAGTGCGGTGGGGATGAGTTCGGGGGAATATTACAAGAGAAGAATCGGGATGGAAGGATTTTTGAAGAGAGAGCGTTCAGGCGCTCAGAATTCAATCTTACGCATTGA

Protein sequence

RLVCASDMSVKLGIMGEIGSYYVYFGLDTVFVPTKDGIEERECGGDEFGGILQEKNRDGRIFEERAFRRSEFNLTH*
Homology
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BLAST of Chy4G073220 vs. ExPASy TrEMBL
Match: A0A0A0LIJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851180 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.3e-27
Identity = 60/69 (86.96%), Postives = 66/69 (95.65%), Query Frame = 0 

Query: 8   MSVKLGIMGEIGSYYVYFGLDTVFVPTKDGIEERECGGDEFGGILQEKNRDGRIFEERAF 67
           MSVKLG MG+IGSY VYFGLDTVFVPT+DGIEERECGGDEFGG+ QEKNRDGRIFEER+F
Sbjct: 175 MSVKLGTMGKIGSYNVYFGLDTVFVPTEDGIEERECGGDEFGGVFQEKNRDGRIFEERSF 234

Query: 68  RRSEFNLTH 77
           +RSEFN+TH
Sbjct: 235 KRSEFNVTH 243

The following BLAST results are available for this feature:
BLAST of Chy4G073220 vs.
Match NameE-valueIdentityDescription
BLAST of Chy4G073220 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIJ91.3e-2786.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851180 PE=4 SV=1[more]
BLAST of Chy4G073220 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of Chy4G073220 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G073220.1Chy4G073220.1mRNA