Chy4G073130 (gene) Cucumber (hystrix) v1

Overview
NameChy4G073130
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH04: 6535777 .. 6537251 (-)
RNA-Seq ExpressionChy4G073130
SyntenyChy4G073130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATAAAGTCAATGTCCCAACTAAAAGAGATTGGAAACAAATGGGACATGAAGAGGCAACTGTAGCTGTTCGTGAAGAAATGAAACGAGTGCAACAGTTTCCTTCTAACAGTACCTATGCTACTCATCGTTTGCGGGTTTTAAACAAAATTCTGCAGCTTTTATCAATTCAGGTTTGTATCATGAAACAGAAGCAATCATTTGGTCAGTTTGTGTTAATAATTGATGTAGTAGAAGTAGGGTAATGTGGGGTTTCTTGTTCAAATATTGAGATTAGGATTAGATTCCACAAATACGACAGGACACAGCACAATGCACAATGTTATTTTTTTAAAAAAAAATATTTAGGACATAGACATGACAAAAATACACAAGAATGTCAAAAAATATATATATTTTTAAAAATATCACTTTTATACCAGAAAGAAATTCAAAGTCAGTGAATCAAAGTTTATTATCTTTTCTCATGTGTCTATTTAGTATATTTAACTAGTGTTTGATACGTTGGACCTACTTTGATTTTCTACAACTAGTGTCTAGCACACCTATGACACTAACATGTCCTCAAGTGTAGGAGTATCTAAATTTCACATTCATTTTAAAGCTTGTACTGTTTTGAATTCTTTGTAGTGCAGTGGTATTATTTTATGCTAATAAATTTGCAATTTGTTAATAAGTACATCTTTTGTGGGGAGGGGTGTTGGTTTGGGTGAGAGGAACAACAAAACTTTTCAAGGCTCGGGAGATCTACAGGTGAAGTTTGGTCCTCTGTAAGATTCAACGTGTCCATATGTTTCAGTTACAAAGCCCTTTTAAGTACCCGTTAGGCTTTATTTTTCTAGAAGTGGTTCTTTTTATAGTTTGCCACCCTTTTTGTTAGCTTATTTTTGTATGCCATTGAATTTTCGTTTGTTCTCAAACTGGGTTATCCATTAAAAAAAAAAAAAAAGATGAGTGAAGCACAGCTTTTCATACTTTTATCCAAGTTTTCAGAGATTTAGAAGCTTTTCATACATTTATCTAAGTTTTCAGAGATTTAGAATTTGACTGTACAGTTGCTTGTGACTAACTTGCTGGAGATTATGCTAAGTTTATGGATCACCTATTCATCTTAAGTTTCTCTTCAATGAAGAATGGATTGCTAATGATGATCCCATTGCTATGCAATTGCTATACGTTTACTCCACATAAAGCTTCAAAATCAATTTAACGATTTTCTCTCGGTCCATTTTCAGTTCATGCAGTGCTGAATTCATCACCAAAACAATCTTAGTTTAGTTTGTTCCTAAGAGTATATACACCACAATCTTAATGTGTGCTGTTGTTCTCGTAGTTGCTTGAATTGCAAAATTTGATGAACATTGCTATATGATTTCTGATATATTGTGTTTGTTTGCTCGTTTTCTTTTGTCAGAGAACTGTATCTCAGGAAGAGGAACTGGAGTTGCTGTTTTCTGGGCTTTCCTTGTGA

mRNA sequence

ATGGAAGATAAAGTCAATGTCCCAACTAAAAGAGATTGGAAACAAATGGGACATGAAGAGGCAACTGTAGCTGTTCGTGAAGAAATGAAACGAGTGCAACAGTTTCCTTCTAACAGTACCTATGCTACTCATCGTTTGCGGGTTTTAAACAAAATTCTGCAGCTTTTATCAATTCAGAGAACTGTATCTCAGGAAGAGGAACTGGAGTTGCTGTTTTCTGGGCTTTCCTTGTGA

Coding sequence (CDS)

ATGGAAGATAAAGTCAATGTCCCAACTAAAAGAGATTGGAAACAAATGGGACATGAAGAGGCAACTGTAGCTGTTCGTGAAGAAATGAAACGAGTGCAACAGTTTCCTTCTAACAGTACCTATGCTACTCATCGTTTGCGGGTTTTAAACAAAATTCTGCAGCTTTTATCAATTCAGAGAACTGTATCTCAGGAAGAGGAACTGGAGTTGCTGTTTTCTGGGCTTTCCTTGTGA

Protein sequence

MEDKVNVPTKRDWKQMGHEEATVAVREEMKRVQQFPSNSTYATHRLRVLNKILQLLSIQRTVSQEEELELLFSGLSL*
Homology
[Close]
BLAST of Chy4G073130 vs. ExPASy TrEMBL
Match: A0A0A0LFX0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851790 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.4e-31
Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0 

Query: 1  MEDKVNVPTKRDWKQMGHEEATVAVREEMKRVQQFPSNSTYATHRLRVLNKILQLLSIQR 60
          MEDKVNVPTKRDWKQMGHE ATVAV EEMKRVQQFPSNSTYATHRLR+LNKILQLLSIQR
Sbjct: 1  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQR 60

Query: 61 TVSQEEELELLFSGLSL 78
          T+SQEEELELLFSGLSL
Sbjct: 61 TLSQEEELELLFSGLSL 77

[Close]
BLAST of Chy4G073130 vs. ExPASy TrEMBL
Match: A0A5A7SZV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001550 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.8e-30
Identity = 73/77 (94.81%), Postives = 74/77 (96.10%), Query Frame = 0 

Query: 1  MEDKVNVPTKRDWKQMGHEEATVAVREEMKRVQQFPSNSTYATHRLRVLNKILQLLSIQR 60
          MEDKV VP KRDWKQMGHEEATVAV EEMKRVQ+FPSNSTYATHRLRVLNKILQLLSIQR
Sbjct: 1  MEDKVTVPPKRDWKQMGHEEATVAVHEEMKRVQKFPSNSTYATHRLRVLNKILQLLSIQR 60

Query: 61 TVSQEEELELLFSGLSL 78
          TVSQEEELELLFSGLSL
Sbjct: 61 TVSQEEELELLFSGLSL 77

[Close]
BLAST of Chy4G073130 vs. ExPASy TrEMBL
Match: A0A6J1CCW1 (uncharacterized protein LOC111010342 OS=Momordica charantia OX=3673 GN=LOC111010342 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.0e-24
Identity = 62/77 (80.52%), Postives = 66/77 (85.71%), Query Frame = 0 

Query: 1  MEDKVNVPTKRDWKQMGHEEATVAVREEMKRVQQFPSNSTYATHRLRVLNKILQLLSIQR 60
          ME KV+ P K +WKQMGHEE TV V +EMKRVQQ PSNS YATHR RVLNKILQLLSIQR
Sbjct: 1  MESKVSAPPKNNWKQMGHEETTVTVHQEMKRVQQLPSNSAYATHRFRVLNKILQLLSIQR 60

Query: 61 TVSQEEELELLFSGLSL 78
          T SQEEELELLF+GLSL
Sbjct: 61 TASQEEELELLFAGLSL 77

[Close]
BLAST of Chy4G073130 vs. ExPASy TrEMBL
Match: A0A6J1IHD5 (uncharacterized protein LOC111476958 OS=Cucurbita maxima OX=3661 GN=LOC111476958 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-23
Identity = 63/77 (81.82%), Postives = 68/77 (88.31%), Query Frame = 0 

Query: 1  MEDKVNVPTKRDWKQMGHEEATVAVREEMKRVQQFPSNSTYATHRLRVLNKILQLLSIQR 60
          ME KV+V  K + KQMGH+EA V V+EEMKRVQQ PSNSTYATHRLRVLNKILQLLSIQR
Sbjct: 1  MEGKVSVSPKNNGKQMGHQEAKVVVQEEMKRVQQLPSNSTYATHRLRVLNKILQLLSIQR 60

Query: 61 TVSQEEELELLFSGLSL 78
          T SQEEELELLF+GLSL
Sbjct: 61 TASQEEELELLFAGLSL 77

[Close]
BLAST of Chy4G073130 vs. ExPASy TrEMBL
Match: A0A6J1F6C2 (uncharacterized protein LOC111442587 OS=Cucurbita moschata OX=3662 GN=LOC111442587 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-23
Identity = 63/77 (81.82%), Postives = 68/77 (88.31%), Query Frame = 0 

Query: 1  MEDKVNVPTKRDWKQMGHEEATVAVREEMKRVQQFPSNSTYATHRLRVLNKILQLLSIQR 60
          ME KV+V  K + KQMGH+EA V V+EEMKRVQQ PSNSTYATHRLRVLNKILQLLSIQR
Sbjct: 1  MEGKVSVSPKNNGKQMGHQEAKVVVQEEMKRVQQLPSNSTYATHRLRVLNKILQLLSIQR 60

Query: 61 TVSQEEELELLFSGLSL 78
          T SQEEELELLF+GLSL
Sbjct: 61 TASQEEELELLFAGLSL 77

[Close]
BLAST of Chy4G073130 vs. NCBI nr
Match: XP_004150100.1 (uncharacterized protein LOC101214758 [Cucumis sativus] >XP_004150101.1 uncharacterized protein LOC101214758 [Cucumis sativus] >KGN59879.1 hypothetical protein Csa_002033 [Cucumis sativus])

HSP 1 Score: 139 bits (349), Expect = 5.24e-41
Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0 

Query: 1  MEDKVNVPTKRDWKQMGHEEATVAVREEMKRVQQFPSNSTYATHRLRVLNKILQLLSIQR 60
          MEDKVNVPTKRDWKQMGHE ATVAV EEMKRVQQFPSNSTYATHRLR+LNKILQLLSIQR
Sbjct: 1  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQR 60

Query: 61 TVSQEEELELLFSGLSL 77
          T+SQEEELELLFSGLSL
Sbjct: 61 TLSQEEELELLFSGLSL 77

[Close]
BLAST of Chy4G073130 vs. NCBI nr
Match: KAA0036794.1 (uncharacterized protein E6C27_scaffold20G00830 [Cucumis melo var. makuwa] >TYJ95861.1 uncharacterized protein E5676_scaffold110G001550 [Cucumis melo var. makuwa])

HSP 1 Score: 137 bits (344), Expect = 3.13e-40
Identity = 73/77 (94.81%), Postives = 74/77 (96.10%), Query Frame = 0 

Query: 1  MEDKVNVPTKRDWKQMGHEEATVAVREEMKRVQQFPSNSTYATHRLRVLNKILQLLSIQR 60
          MEDKV VP KRDWKQMGHEEATVAV EEMKRVQ+FPSNSTYATHRLRVLNKILQLLSIQR
Sbjct: 1  MEDKVTVPPKRDWKQMGHEEATVAVHEEMKRVQKFPSNSTYATHRLRVLNKILQLLSIQR 60

Query: 61 TVSQEEELELLFSGLSL 77
          TVSQEEELELLFSGLSL
Sbjct: 61 TVSQEEELELLFSGLSL 77

[Close]
BLAST of Chy4G073130 vs. NCBI nr
Match: XP_022139403.1 (uncharacterized protein LOC111010342 [Momordica charantia] >XP_022139404.1 uncharacterized protein LOC111010342 [Momordica charantia])

HSP 1 Score: 118 bits (296), Expect = 6.40e-33
Identity = 62/77 (80.52%), Postives = 66/77 (85.71%), Query Frame = 0 

Query: 1  MEDKVNVPTKRDWKQMGHEEATVAVREEMKRVQQFPSNSTYATHRLRVLNKILQLLSIQR 60
          ME KV+ P K +WKQMGHEE TV V +EMKRVQQ PSNS YATHR RVLNKILQLLSIQR
Sbjct: 1  MESKVSAPPKNNWKQMGHEETTVTVHQEMKRVQQLPSNSAYATHRFRVLNKILQLLSIQR 60

Query: 61 TVSQEEELELLFSGLSL 77
          T SQEEELELLF+GLSL
Sbjct: 61 TASQEEELELLFAGLSL 77

[Close]
BLAST of Chy4G073130 vs. NCBI nr
Match: XP_038898294.1 (uncharacterized protein LOC120085994 [Benincasa hispida] >XP_038898295.1 uncharacterized protein LOC120085994 [Benincasa hispida])

HSP 1 Score: 115 bits (289), Expect = 7.48e-32
Identity = 64/77 (83.12%), Postives = 67/77 (87.01%), Query Frame = 0 

Query: 1  MEDKVNVPTKRDWKQMGHEEATVAVREEMKRVQQFPSNSTYATHRLRVLNKILQLLSIQR 60
          ME K  V  KR WKQM H+EAT AV EEMKRVQ+ PSNSTYATHRLRVLNKILQLLSIQR
Sbjct: 1  MEGKFTVSPKRGWKQMEHKEATGAVHEEMKRVQRLPSNSTYATHRLRVLNKILQLLSIQR 60

Query: 61 TVSQEEELELLFSGLSL 77
          TVSQEEELELLF+GLSL
Sbjct: 61 TVSQEEELELLFAGLSL 77

[Close]
BLAST of Chy4G073130 vs. NCBI nr
Match: KAG7024864.1 (hypothetical protein SDJN02_13683 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 115 bits (288), Expect = 1.06e-31
Identity = 63/77 (81.82%), Postives = 68/77 (88.31%), Query Frame = 0 

Query: 1  MEDKVNVPTKRDWKQMGHEEATVAVREEMKRVQQFPSNSTYATHRLRVLNKILQLLSIQR 60
          ME KV+V  K D KQMGH+EA V V+EEMKRVQQ PSNSTYATHR+RVLNKILQLLSIQR
Sbjct: 1  MESKVSVLPKNDGKQMGHQEAKVVVQEEMKRVQQLPSNSTYATHRMRVLNKILQLLSIQR 60

Query: 61 TVSQEEELELLFSGLSL 77
          T SQEEELELLF+GLSL
Sbjct: 61 TASQEEELELLFAGLSL 77

[Close]
BLAST of Chy4G073130 vs. TAIR 10
Match: AT3G13677.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 79.3 bits (194), Expect = 1.5e-15
Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 0 

Query: 13 WKQMGHEEATVAVREEMKRVQQFPSNSTYATHRLRVLNKILQLLSIQRTVSQEEELELLF 72
          W +M  +E +  ++EE+KRV + PSNS YA HRL+VLNKI  LLS+QRT+SQE+ELELLF
Sbjct: 12 WNEMDCDEKSSVIQEEIKRVCKLPSNSVYAVHRLKVLNKINDLLSVQRTLSQEKELELLF 71

Query: 73 SGLSL 78
          + LSL
Sbjct: 72 TQLSL 76

[Close]
BLAST of Chy4G073130 vs. TAIR 10
Match: AT3G13677.1 (unknown protein; Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 1.2e-09
Identity = 29/53 (54.72%), Postives = 39/53 (73.58%), Query Frame = 0 

Query: 13 WKQMGHEEATVAVREEMKRVQQFPSNSTYATHRLRVLNKILQLLSIQRTVSQE 66
          W +M  +E +  ++EE+KRV + PSNS YA HRL+VLNKI  LLS+Q  VS+E
Sbjct: 12 WNEMDCDEKSSVIQEEIKRVCKLPSNSVYAVHRLKVLNKINDLLSVQNIVSRE 64

The following BLAST results are available for this feature:
BLAST of Chy4G073130 vs.
Match NameE-valueIdentityDescription
BLAST of Chy4G073130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFX07.4e-3194.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851790 PE=4 SV=1[more]
A0A5A7SZV02.8e-3094.81Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1CCW11.0e-2480.52uncharacterized protein LOC111010342 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A6J1IHD51.5e-2381.82uncharacterized protein LOC111476958 OS=Cucurbita maxima OX=3661 GN=LOC111476958... [more]
A0A6J1F6C21.5e-2381.82uncharacterized protein LOC111442587 OS=Cucurbita moschata OX=3662 GN=LOC1114425... [more]
BLAST of Chy4G073130 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150100.15.24e-4194.81uncharacterized protein LOC101214758 [Cucumis sativus] >XP_004150101.1 uncharact... [more]
KAA0036794.13.13e-4094.81uncharacterized protein E6C27_scaffold20G00830 [Cucumis melo var. makuwa] >TYJ95... [more]
XP_022139403.16.40e-3380.52uncharacterized protein LOC111010342 [Momordica charantia] >XP_022139404.1 uncha... [more]
XP_038898294.17.48e-3283.12uncharacterized protein LOC120085994 [Benincasa hispida] >XP_038898295.1 unchara... [more]
KAG7024864.11.06e-3181.82hypothetical protein SDJN02_13683 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Chy4G073130 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13677.21.5e-1561.54unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G13677.11.2e-0954.72unknown protein; Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bac... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G073130.1Chy4G073130.1mRNA