Chy4G072910 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGAGTAGCATTTCGAGTATGGAATGCAGCAATGGGGGGTCATCGTCCACGTGTTCTTCGTCGCACCTCGACGACGTTCTCGAGTCGTTGCCCGAGATTAAAGACGGGTTCTTCAGGTTGCCTAGAGTTAATTCTCTTCTAACTTTACAGCAAGATCATGAGAATCTCAAGTTTCAGAATCATCTCATGGGGTCCACTAATTTCGACTGGGCTTCGGCCGCCGCTGCAACCTCCTTTGAAGGCTACAACTCGGTCGCCGAACTCGCTCCTCTTGCTCAGTCTCAGGCTCCGTCAGGGCTTATTAGTTCCGACATGTATATTCCGGCCGGTCAACCGCCGAGGAGCACGGCGGAGCAGGAAGTACAGAGTGGATTTCAACGGTTTCATAACTTTGGTTGGTTGCAGCAGAATTTCTCCAACTCCGGCGACGGTTTTGGGTTTTGAAAAATGTCTGGTGACCGGTTTGGCCAGAGTGGGTGCGGTTTTAGGGGAACGTGTTGGAAGAGTCTTTGTGTAG ATGACGAGTAGCATTTCGAGTATGGAATGCAGCAATGGGGGGTCATCGTCCACGTGTTCTTCGTCGCACCTCGACGACGTTCTCGAGTCGTTGCCCGAGATTAAAGACGGGTTCTTCAGGTTGCCTAGAGTTAATTCTCTTCTAACTTTACAGCAAGATCATGAGAATCTCAAGTTTCAGAATCATCTCATGGGGTCCACTAATTTCGACTGGGCTTCGGCCGCCGCTGCAACCTCCTTTGAAGGCTACAACTCGGTCGCCGAACTCGCTCCTCTTGCTCAGTCTCAGGCTCCGTCAGGGCTTATTAGTTCCGACATCAGAATTTCTCCAACTCCGGCGACGGTTTTGGGTTTTGAAAAATGTCTGGTGACCGGTTTGGCCAGAGTGGGTGCGGTTTTAGGGGAACGTGTTGGAAGAGTCTTTGTGTAG ATGACGAGTAGCATTTCGAGTATGGAATGCAGCAATGGGGGGTCATCGTCCACGTGTTCTTCGTCGCACCTCGACGACGTTCTCGAGTCGTTGCCCGAGATTAAAGACGGGTTCTTCAGGTTGCCTAGAGTTAATTCTCTTCTAACTTTACAGCAAGATCATGAGAATCTCAAGTTTCAGAATCATCTCATGGGGTCCACTAATTTCGACTGGGCTTCGGCCGCCGCTGCAACCTCCTTTGAAGGCTACAACTCGGTCGCCGAACTCGCTCCTCTTGCTCAGTCTCAGGCTCCGTCAGGGCTTATTAGTTCCGACATCAGAATTTCTCCAACTCCGGCGACGGTTTTGGGTTTTGAAAAATGTCTGGTGACCGGTTTGGCCAGAGTGGGTGCGGTTTTAGGGGAACGTGTTGGAAGAGTCTTTGTGTAG MTSSISSMECSNGGSSSTCSSSHLDDVLESLPEIKDGFFRLPRVNSLLTLQQDHENLKFQNHLMGSTNFDWASAAAATSFEGYNSVAELAPLAQSQAPSGLISSDIRISPTPATVLGFEKCLVTGLARVGAVLGERVGRVFV* Homology
BLAST of Chy4G072910 vs. ExPASy Swiss-Prot
Match: A0A3Q7HH64 (NAC domain-containing protein JA2L OS=Solanum lycopersicum OX=4081 GN=JA2L PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.1e-08 Identity = 37/78 (47.44%), Postives = 47/78 (60.26%), Query Frame = 0
BLAST of Chy4G072910 vs. ExPASy Swiss-Prot
Match: Q93VY3 (NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.6e-07 Identity = 41/83 (49.40%), Postives = 47/83 (56.63%), Query Frame = 0
BLAST of Chy4G072910 vs. ExPASy Swiss-Prot
Match: Q9SQL0 (NAC domain-containing protein JA2 OS=Solanum lycopersicum OX=4081 GN=JA2 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.9e-06 Identity = 43/100 (43.00%), Postives = 52/100 (52.00%), Query Frame = 0
BLAST of Chy4G072910 vs. ExPASy Swiss-Prot
Match: Q9C932 (NAC domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=NAC019 PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.6e-04 Identity = 35/81 (43.21%), Postives = 47/81 (58.02%), Query Frame = 0
BLAST of Chy4G072910 vs. ExPASy TrEMBL
Match: A0A0A0LDN6 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G852470 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 5.5e-48 Identity = 104/108 (96.30%), Postives = 106/108 (98.15%), Query Frame = 0
BLAST of Chy4G072910 vs. ExPASy TrEMBL
Match: A0A5A7UR91 (NAC domain-containing protein 72-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold741G00250 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.3e-46 Identity = 102/108 (94.44%), Postives = 103/108 (95.37%), Query Frame = 0
BLAST of Chy4G072910 vs. ExPASy TrEMBL
Match: A0A5D3DU21 (NAC domain-containing protein 72-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1920G00200 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.3e-46 Identity = 102/108 (94.44%), Postives = 103/108 (95.37%), Query Frame = 0
BLAST of Chy4G072910 vs. ExPASy TrEMBL
Match: A0A1S3C0D5 (NAC domain-containing protein 72-like OS=Cucumis melo OX=3656 GN=LOC103495020 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.3e-46 Identity = 102/108 (94.44%), Postives = 103/108 (95.37%), Query Frame = 0
BLAST of Chy4G072910 vs. ExPASy TrEMBL
Match: A0A6J1FMB8 (NAC domain-containing protein 72-like OS=Cucurbita moschata OX=3662 GN=LOC111446700 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 7.2e-24 Identity = 73/126 (57.94%), Postives = 92/126 (73.02%), Query Frame = 0
BLAST of Chy4G072910 vs. NCBI nr
Match: TYK27143.1 (NAC domain-containing protein 72-like [Cucumis melo var. makuwa]) HSP 1 Score: 195 bits (495), Expect = 3.70e-61 Identity = 102/108 (94.44%), Postives = 103/108 (95.37%), Query Frame = 0
BLAST of Chy4G072910 vs. NCBI nr
Match: XP_004147806.1 (NAC domain-containing protein 72 isoform X2 [Cucumis sativus] >KGN59898.1 hypothetical protein Csa_002477 [Cucumis sativus]) HSP 1 Score: 200 bits (508), Expect = 7.61e-61 Identity = 110/131 (83.97%), Postives = 116/131 (88.55%), Query Frame = 0
BLAST of Chy4G072910 vs. NCBI nr
Match: XP_011652388.1 (NAC domain-containing protein 72 isoform X1 [Cucumis sativus]) HSP 1 Score: 200 bits (508), Expect = 1.90e-60 Identity = 110/131 (83.97%), Postives = 116/131 (88.55%), Query Frame = 0
BLAST of Chy4G072910 vs. NCBI nr
Match: KAA0057157.1 (NAC domain-containing protein 72-like [Cucumis melo var. makuwa]) HSP 1 Score: 195 bits (495), Expect = 5.11e-59 Identity = 102/108 (94.44%), Postives = 103/108 (95.37%), Query Frame = 0
BLAST of Chy4G072910 vs. NCBI nr
Match: XP_008454666.1 (PREDICTED: NAC domain-containing protein 72-like [Cucumis melo]) HSP 1 Score: 195 bits (495), Expect = 6.96e-59 Identity = 102/108 (94.44%), Postives = 103/108 (95.37%), Query Frame = 0
BLAST of Chy4G072910 vs. TAIR 10
Match: AT4G27410.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-08 Identity = 41/83 (49.40%), Postives = 47/83 (56.63%), Query Frame = 0
BLAST of Chy4G072910 vs. TAIR 10
Match: AT4G27410.2 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-08 Identity = 41/83 (49.40%), Postives = 47/83 (56.63%), Query Frame = 0
BLAST of Chy4G072910 vs. TAIR 10
Match: AT4G27410.3 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-08 Identity = 41/83 (49.40%), Postives = 47/83 (56.63%), Query Frame = 0
BLAST of Chy4G072910 vs. TAIR 10
Match: AT1G52890.1 (NAC domain containing protein 19 ) HSP 1 Score: 46.2 bits (108), Expect = 2.5e-05 Identity = 35/81 (43.21%), Postives = 47/81 (58.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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