Chy4G072520 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G072520
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	SAP30_Sin3_bdg domain-containing protein
Location	chrH04: 5325133 .. 5327095 (+)
RNA-Seq Expression	Chy4G072520
Synteny	Chy4G072520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGAAGCTGTGGAGAGCTCCGTCAATGGCGCCTTCTCCCACCTCCACAGTAGTGGTGACAGTAGTGAGGAGGAGCTTTCTGTTCTCCCTCGCCATACCAAAGTCGTTGTCACCGGAAACAATCGTACCAAATCGGTGCTCGTTGGACTTCAAGGCGTTGTTAAGAAGGCTGTTGGTTTGGGTGGATGGCATTGGCTGGTATGTCGCTTTCTTTAATTCACTTGTTATTTTTTTTTATTTCTTTTATTTTTTTGAATGAGTCTAGGCTACATTCAGTCTTGATTGAATCAATTTTGAGTATTGATTAGGTTTTCCCCAATTCCCAATTCCCAATTCTGTTTTTTTGGAATTTAAAAAAAAAAATTAATCATTTTTGTTGTGGTTTCAACTTATGATTTCATGCTTAATTTGTTTATTGCATCCATTTCGATTTTTGAATTTCTCTAGAAAAAATCTCAGCTATGAATTGCATGTTCAATTTGACCTCTGGATCTGGTGATTATTGATATGGAAGTTTCTTTCACAATGTAAAATTCATTTATTGTAATTGAATTCGGGAAATTTTATTGAATTTGTGAGTTCATAATTTCTCGAATATTTATAGATTCTTGTTCTGTTTCCTTTGGATATTCCTCCTACCAAGTGTAAAATTTATTTCCATGTTTATCTAGATGTTGTGTTCCTTGATGTTCGACTTAGAACAGTGTGATTCTTCTTTTGAAACTTGCAGGTCACCGTGATTATAAATATAATATAGGTTCAGCATTTAATTTTGAAATTAAAAAATCCTCAGGTTCTCACAAATGGCATTGAAGTTAAGCTACAGAGAAACGCCCTCAGTGTAATTGAAGCACCAACCGGCAATGAGGATGATGAAGATCTCGAATTCGAGAACTTACACTGGAATGGATCCGATATGGGTAAGTTTGGAATCGCTTTTATTCTTGTTCACTGGATTGAATAAACAACATTGGATTGTTGATTCTTCAAATGGATTATATTGGTGAATTTCGTAAGCTGGCATCAATTAAACATAGTAAAAAGGCATAAAGAAAGCTAGTTGTCCTCACTTTCCTTTCGATTCTGATTAGGGCATTCATAATTAAAACGCTTGCTTGTTTTGGGTAATTGTTTCATTGGTCCTCTGTAGTTGTTGTGGAATGATATACTTTTTAGGAATAGTGGTTGAGTTTGGTACTTTGGATTCTTTGCTCATTCACCTTTTGCTTTATTTGAAATCTTGTTGTGTCATTTATTCTTTTTCTCCTGGCCCCTCCCATGTTTTCTTTTCATAATGCTTTTGGTATTTTGATTTTCCAGCATCTGATGACACTCTAAAGTCCCATAGACCGAGACAAAGGACACACAAATCGTCGGGATCATCCCTCAAAACAATCAGCCGATCGTTCTCATATGAATCACAGTCCAAGGGATCTATTTCCACCCCCCGTGGGTCCATGGTACATAAGAAACCGACTGATCGTTTTTTGTTGCATTTCTAGAAATAAAACGGTTTTGTGCTCATAATCTAAGTTGGGCCTTAATTATTGATGTTCCCTGTTCAGAAAGTCGACCTCGGTAAACTTGAGATGTCTGCCTTGTGGAGATATTGGCGACACTTCAATCTTGTAAGTTACTGTTTATTTGATAGGCATTCTATAGTTTGCTTAAGCTGCATGACTGAGAGAATTCTATATCTTATAGGTGGATGCCTTTCCTAACCCATCAAAAGAACAGTTAGTGGATGTTGTTCGAAGGCATTTCATGTCCCAGGTACTCAGATTTCTTGATCTAAATGTTGTTTATTTTTCAATCAATCGATGCTTGTGCCTATACGGGTGCTGTAATACTACATCCCATAACATGTTTGTTTACAATGCTTGTGCAGCAACTAGACGAGTTACAGGTGATTGTTGGGTTTGTCCACGCTGCAAAGAGACTCAAGACTGTCTGCAAATGA

mRNA sequence

ATGCTTGAAGCTGTGGAGAGCTCCGTCAATGGCGCCTTCTCCCACCTCCACAGTAGTGGTGACAGTAGTGAGGAGGAGCTTTCTGTTCTCCCTCGCCATACCAAAGTCGTTGTCACCGGAAACAATCGTACCAAATCGGTGCTCGTTGGACTTCAAGGCGTTGTTAAGAAGGCTGTTGGTTTGGGTGGATGGCATTGGCTGGTTCTCACAAATGGCATTGAAGTTAAGCTACAGAGAAACGCCCTCAGTGTAATTGAAGCACCAACCGGCAATGAGGATGATGAAGATCTCGAATTCGAGAACTTACACTGGAATGGATCCGATATGGCATCTGATGACACTCTAAAGTCCCATAGACCGAGACAAAGGACACACAAATCGTCGGGATCATCCCTCAAAACAATCAGCCGATCGTTCTCATATGAATCACAGTCCAAGGGATCTATTTCCACCCCCCGTGGGTCCATGAAAGTCGACCTCGGTAAACTTGAGATGTCTGCCTTGTGGAGATATTGGCGACACTTCAATCTTGTGGATGCCTTTCCTAACCCATCAAAAGAACAGTTAGTGGATGTTGTTCGAAGGCATTTCATGTCCCAGCAACTAGACGAGTTACAGGTGATTGTTGGGTTTGTCCACGCTGCAAAGAGACTCAAGACTGTCTGCAAATGA

Coding sequence (CDS)

ATGCTTGAAGCTGTGGAGAGCTCCGTCAATGGCGCCTTCTCCCACCTCCACAGTAGTGGTGACAGTAGTGAGGAGGAGCTTTCTGTTCTCCCTCGCCATACCAAAGTCGTTGTCACCGGAAACAATCGTACCAAATCGGTGCTCGTTGGACTTCAAGGCGTTGTTAAGAAGGCTGTTGGTTTGGGTGGATGGCATTGGCTGGTTCTCACAAATGGCATTGAAGTTAAGCTACAGAGAAACGCCCTCAGTGTAATTGAAGCACCAACCGGCAATGAGGATGATGAAGATCTCGAATTCGAGAACTTACACTGGAATGGATCCGATATGGCATCTGATGACACTCTAAAGTCCCATAGACCGAGACAAAGGACACACAAATCGTCGGGATCATCCCTCAAAACAATCAGCCGATCGTTCTCATATGAATCACAGTCCAAGGGATCTATTTCCACCCCCCGTGGGTCCATGAAAGTCGACCTCGGTAAACTTGAGATGTCTGCCTTGTGGAGATATTGGCGACACTTCAATCTTGTGGATGCCTTTCCTAACCCATCAAAAGAACAGTTAGTGGATGTTGTTCGAAGGCATTTCATGTCCCAGCAACTAGACGAGTTACAGGTGATTGTTGGGTTTGTCCACGCTGCAAAGAGACTCAAGACTGTCTGCAAATGA

Protein sequence

MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDEDLEFENLHWNGSDMASDDTLKSHRPRQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDAFPNPSKEQLVDVVRRHFMSQQLDELQVIVGFVHAAKRLKTVCK*

Homology

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BLAST of Chy4G072520 vs. ExPASy TrEMBL
Match: A0A5A7UBV0 (SAP30_Sin3_bdg domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00490 PE=3 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 4.6e-118
Identity = 219/223 (98.21%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDEDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDD+DLEFENLHWNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQR HK SGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVRRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
           FPNPSKEQLVDVV+RHFMSQQLDELQVIVGFVHAAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 223

[Close]

BLAST of Chy4G072520 vs. ExPASy TrEMBL
Match: A0A1S3CRQ8 (uncharacterized protein LOC103503976 OS=Cucumis melo OX=3656 GN=LOC103503976 PE=3 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 4.6e-118
Identity = 219/223 (98.21%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDEDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDD+DLEFENLHWNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQR HK SGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVRRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
           FPNPSKEQLVDVV+RHFMSQQLDELQVIVGFVHAAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 223

[Close]

BLAST of Chy4G072520 vs. ExPASy TrEMBL
Match: A0A0A0LDS8 (SAP30_Sin3_bdg domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G855270 PE=3 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 6.0e-118
Identity = 221/224 (98.66%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDEDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDD+DLEFENLHWNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVRRHFMSQQLDELQVIVGFVHAAKRLK-TVCK 224
           FPNPSKEQLVDVV+RHFMSQQLDELQVIVGFVHAAKRLK TVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 224

[Close]

BLAST of Chy4G072520 vs. ExPASy TrEMBL
Match: A0A5D3BHH5 (SAP30_Sin3_bdg domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00320 PE=3 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.3e-117
Identity = 219/223 (98.21%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDEDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDD DLEFENLHWNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDGDLEFENLHWNGSDMASDDTLKSHRP 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQR HK SGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVRRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
           FPNPSKEQLVDVV+RHFMSQQLDELQVIVGFVHAAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 223

[Close]

BLAST of Chy4G072520 vs. ExPASy TrEMBL
Match: A0A6J1CR00 (uncharacterized protein LOC111013658 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013658 PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 9.0e-114
Identity = 213/223 (95.52%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNG FS L SSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGGFSQLQSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDEDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTG+EDD+DLEFENL WNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGHEDDDDLEFENLQWNGSDMASDDTLKSHRP 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           R RTHKSSGSS KTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RHRTHKSSGSSHKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVRRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
           FPNPSKEQLVD+V+RHFMSQQLDELQVIVGFVHAAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDLVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 223

[Close]

BLAST of Chy4G072520 vs. NCBI nr
Match: XP_008466608.1 (PREDICTED: uncharacterized protein LOC103503976 [Cucumis melo] >KAA0051676.1 SAP30_Sin3_bdg domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 432 bits (1112), Expect = 1.22e-152
Identity = 219/223 (98.21%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDEDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDD+DLEFENLHWNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQR HK SGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVRRHFMSQQLDELQVIVGFVHAAKRLKTVCK 223
           FPNPSKEQLVDVV+RHFMSQQLDELQVIVGFVHAAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 223

[Close]

BLAST of Chy4G072520 vs. NCBI nr
Match: XP_004147794.1 (uncharacterized protein LOC101206163 [Cucumis sativus] >KGN59933.1 hypothetical protein Csa_001587 [Cucumis sativus])

HSP 1 Score: 432 bits (1111), Expect = 1.80e-152
Identity = 221/224 (98.66%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDEDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDD+DLEFENLHWNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVRRHFMSQQLDELQVIVGFVHAAKRLKT-VCK 223
           FPNPSKEQLVDVV+RHFMSQQLDELQVIVGFVHAAKRLKT VCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 224

[Close]

BLAST of Chy4G072520 vs. NCBI nr
Match: TYJ97935.1 (SAP30_Sin3_bdg domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 431 bits (1108), Expect = 4.98e-152
Identity = 219/223 (98.21%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDEDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDD DLEFENLHWNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDGDLEFENLHWNGSDMASDDTLKSHRP 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQR HK SGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVRRHFMSQQLDELQVIVGFVHAAKRLKTVCK 223
           FPNPSKEQLVDVV+RHFMSQQLDELQVIVGFVHAAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 223

[Close]

BLAST of Chy4G072520 vs. NCBI nr
Match: XP_038903295.1 (uncharacterized protein LOC120089924 [Benincasa hispida])

HSP 1 Score: 429 bits (1102), Expect = 4.09e-151
Identity = 217/223 (97.31%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNG FSHL SSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGGFSHLQSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDEDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDD+DLEFEN+HWNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENIHWNGSDMASDDTLKSHRP 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQRTHKSSGSS KTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RQRTHKSSGSSHKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVRRHFMSQQLDELQVIVGFVHAAKRLKTVCK 223
           FPNPSKEQLVDVV+RHFMSQQLDELQVIVGFVHAAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 223

[Close]

BLAST of Chy4G072520 vs. NCBI nr
Match: XP_022144205.1 (uncharacterized protein LOC111013658 isoform X1 [Momordica charantia])

HSP 1 Score: 418 bits (1075), Expect = 5.34e-147
Identity = 213/223 (95.52%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNG FS L SSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGGFSQLQSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDEDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTG+EDD+DLEFENL WNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGHEDDDDLEFENLQWNGSDMASDDTLKSHRP 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           R RTHKSSGSS KTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RHRTHKSSGSSHKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVRRHFMSQQLDELQVIVGFVHAAKRLKTVCK 223
           FPNPSKEQLVD+V+RHFMSQQLDELQVIVGFVHAAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDLVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 223

[Close]

BLAST of Chy4G072520 vs. TAIR 10
Match: AT1G19330.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits to 145 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 322.8 bits (826), Expect = 2.2e-88
Identity = 173/227 (76.21%), Postives = 191/227 (84.14%), Query Frame = 0


Query: 1   MLEAVESS--VNGAFSHLHS-SGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK 60
           MLEAV+SS  VNG F  + S  GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK
Sbjct: 1   MLEAVDSSGVVNGGFPQIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK 60

Query: 61  KAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDEDLEFENLHWNGSDMASDDTLK 120
           KAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNE+D+DL+FEN   NGSDM S+DTLK
Sbjct: 61  KAVGLGGWHWLVLTNGIEVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDMTSEDTLK 120

Query: 121 SHRPRQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFN 180
            H+ + R  +SS SS KT+SRS S +SQSK S  TP  +MKVDL KLEM AL  YWRHFN
Sbjct: 121 PHKSKLRGQRSSRSSHKTMSRSLSSDSQSKSSGFTPPENMKVDLSKLEMPALLNYWRHFN 180

Query: 181 LVDAFPNPSKEQLVDVVRRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
           LVDA PNPSKEQL+D+V+RHFMSQQ+DELQVIVGFV AAKR+K  CK
Sbjct: 181 LVDAIPNPSKEQLIDIVQRHFMSQQMDELQVIVGFVQAAKRMKKACK 227

[Close]

BLAST of Chy4G072520 vs. TAIR 10
Match: AT1G19330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits to 145 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 318.2 bits (814), Expect = 5.4e-87
Identity = 174/232 (75.00%), Postives = 192/232 (82.76%), Query Frame = 0


Query: 1   MLEAVESS--VNGAFSHLHS-SGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK 60
           MLEAV+SS  VNG F  + S  GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK
Sbjct: 1   MLEAVDSSGVVNGGFPQIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK 60

Query: 61  KAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDEDLEFENLHWNGSDM-----AS 120
           KAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNE+D+DL+FEN   NGSDM     AS
Sbjct: 61  KAVGLGGWHWLVLTNGIEVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDMIVSFPAS 120

Query: 121 DDTLKSHRPRQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRY 180
           +DTLK H+ + R  +SS SS KT+SRS S +SQSK S  TP  +MKVDL KLEM AL  Y
Sbjct: 121 EDTLKPHKSKLRGQRSSRSSHKTMSRSLSSDSQSKSSGFTPPENMKVDLSKLEMPALLNY 180

Query: 181 WRHFNLVDAFPNPSKEQLVDVVRRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
           WRHFNLVDA PNPSKEQL+D+V+RHFMSQQ+DELQVIVGFV AAKR+K  CK
Sbjct: 181 WRHFNLVDAIPNPSKEQLIDIVQRHFMSQQMDELQVIVGFVQAAKRMKKACK 232

[Close]

BLAST of Chy4G072520 vs. TAIR 10
Match: AT1G19330.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1). )

HSP 1 Score: 313.5 bits (802), Expect = 1.3e-85
Identity = 174/233 (74.68%), Postives = 192/233 (82.40%), Query Frame = 0


Query: 1   MLEAVESS--VNGAFSHLHS-SGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK 60
           MLEAV+SS  VNG F  + S  GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK
Sbjct: 1   MLEAVDSSGVVNGGFPQIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK 60

Query: 61  KAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDEDLEFENLHWNGSDM-----AS 120
           KAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNE+D+DL+FEN   NGSDM     AS
Sbjct: 61  KAVGLGGWHWLVLTNGIEVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDMIVSFPAS 120

Query: 121 DDTLKSHRPRQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSM-KVDLGKLEMSALWR 180
           +DTLK H+ + R  +SS SS KT+SRS S +SQSK S  TP  +M KVDL KLEM AL  
Sbjct: 121 EDTLKPHKSKLRGQRSSRSSHKTMSRSLSSDSQSKSSGFTPPENMQKVDLSKLEMPALLN 180

Query: 181 YWRHFNLVDAFPNPSKEQLVDVVRRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
           YWRHFNLVDA PNPSKEQL+D+V+RHFMSQQ+DELQVIVGFV AAKR+K  CK
Sbjct: 181 YWRHFNLVDAIPNPSKEQLIDIVQRHFMSQQMDELQVIVGFVQAAKRMKKACK 233

[Close]

BLAST of Chy4G072520 vs. TAIR 10
Match: AT1G75060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19330.2); Has 104 Blast hits to 104 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 289.7 bits (740), Expect = 2.1e-78
Identity = 155/217 (71.43%), Postives = 178/217 (82.03%), Query Frame = 0


Query: 11  GAFSHLHSS-GD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLV 70
           G FS L S  GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLV
Sbjct: 17  GGFSQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLV 76

Query: 71  LTNGIEVKLQRNALSVIEAPTGNEDDEDLEFE-NLHWN-GSDMASDDTLKSHRPRQRTHK 130
           LTNGIEVKLQRNALSV+E PTGNE+D DLE + +  WN  SDM ++DTLK H+ ++R H+
Sbjct: 77  LTNGIEVKLQRNALSVLEHPTGNEEDNDLEVDHSTQWNHPSDMTTEDTLKPHKSKKRGHR 136

Query: 131 SSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDAFPNPSK 190
           SS  S K + R  S +S SK S  TPR +MKVDL KL+M+AL RYWRHFNLVDA PNP+K
Sbjct: 137 SSRLSQKALYREVSCDSHSKISSITPRLNMKVDLTKLDMAALLRYWRHFNLVDALPNPTK 196

Query: 191 EQLVDVVRRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
           EQL+D+++RHFMSQQ+DELQVIVGFV AA  +K  C+
Sbjct: 197 EQLIDIIQRHFMSQQMDELQVIVGFVQAATGMKKACQ 233

[Close]

BLAST of Chy4G072520 vs. TAIR 10
Match: AT1G75060.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19330.2); Has 104 Blast hits to 104 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 283.1 bits (723), Expect = 1.9e-76
Identity = 154/217 (70.97%), Postives = 177/217 (81.57%), Query Frame = 0


Query: 11  GAFSHLHSS-GD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLV 70
           G FS L S  GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLV
Sbjct: 17  GGFSQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLV 76

Query: 71  LTNGIEVKLQRNALSVIEAPTGNEDDEDLEFE-NLHWN-GSDMASDDTLKSHRPRQRTHK 130
           LTNGIEVKLQRNALSV+E PTGNE+D DLE + +  WN  SDM ++DTLK H+ ++R H+
Sbjct: 77  LTNGIEVKLQRNALSVLEHPTGNEEDNDLEVDHSTQWNHPSDMTTEDTLKPHKSKKRGHR 136

Query: 131 SSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDAFPNPSK 190
           SS  S K + R  S +S SK S  TPR +M VDL KL+M+AL RYWRHFNLVDA PNP+K
Sbjct: 137 SSRLSQKALYREVSCDSHSKISSITPRLNM-VDLTKLDMAALLRYWRHFNLVDALPNPTK 196

Query: 191 EQLVDVVRRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
           EQL+D+++RHFMSQQ+DELQVIVGFV AA  +K  C+
Sbjct: 197 EQLIDIIQRHFMSQQMDELQVIVGFVQAATGMKKACQ 232

The following BLAST results are available for this feature:

BLAST of Chy4G072520 vs.


Match Name	E-value	Identity	Description

BLAST of Chy4G072520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBV0	4.6e-118	98.21	SAP30_Sin3_bdg domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CRQ8	4.6e-118	98.21	uncharacterized protein LOC103503976 OS=Cucumis melo OX=3656 GN=LOC103503976 PE=...	[more]
A0A0A0LDS8	6.0e-118	98.66	SAP30_Sin3_bdg domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G855...	[more]
A0A5D3BHH5	1.3e-117	98.21	SAP30_Sin3_bdg domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1CR00	9.0e-114	95.52	uncharacterized protein LOC111013658 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Chy4G072520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466608.1	1.22e-152	98.21	PREDICTED: uncharacterized protein LOC103503976 [Cucumis melo] >KAA0051676.1 SAP...	[more]
XP_004147794.1	1.80e-152	98.66	uncharacterized protein LOC101206163 [Cucumis sativus] >KGN59933.1 hypothetical ...	[more]
TYJ97935.1	4.98e-152	98.21	SAP30_Sin3_bdg domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_038903295.1	4.09e-151	97.31	uncharacterized protein LOC120089924 [Benincasa hispida]	[more]
XP_022144205.1	5.34e-147	95.52	uncharacterized protein LOC111013658 isoform X1 [Momordica charantia]	[more]

BLAST of Chy4G072520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19330.2	2.2e-88	76.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G19330.1	5.4e-87	75.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G19330.3	1.3e-85	74.68	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G75060.1	2.1e-78	71.43	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G75060.2	1.9e-76	70.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038291	SAP30, C-terminal domain superfamily	GENE3D	6.10.160.20		coord: 138..223 e-value: 1.1E-26 score: 94.5
IPR025718	Histone deacetylase complex subunit SAP30, Sin3 binding domain	PFAM	PF13867	SAP30_Sin3_bdg	coord: 163..216 e-value: 5.5E-22 score: 77.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..132
None	No IPR available	PANTHER	PTHR13286:SF10	HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN	coord: 1..223
IPR024145	Histone deacetylase complex subunit SAP30/SAP30-like	PANTHER	PTHR13286	SAP30	coord: 1..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G072520.1	Chy4G072520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0000118	histone deacetylase complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003712	transcription coregulator activity