Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTTAAAAAATCAAGATAAGTTAGAAAAGAATCTTGAGATATTAGATAAAGAGATGAGGCGAACGAATAAAGCAAGTAGAAGCTTGAAAAATGAAAAGACAACATTACAGACAACAATATAATCACAAGATGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTTGAGCTTGTCAATGATTTGAATACATCAATTGGAAAATGATAAGAACAAATAGAGCATTTGGAAGCACACAATCATTCTCTACGTCAAACTATTGATAGCCTACATGTGAAGATGGTCGAGCACTCTAAAGAGTATAAGATACTGAAAAATTATGTTGATTCCTTACACTATCAACTTACTGCATTTCAAAATTCAAGTGAGAGGATAGTGTAAACATACGAGTTATTGAAGACAGATTACATGAAAATGAAGGTTGATTATGATTTGTAAATGAGAGATTTTCAGGTGTTAGTTGAACGTGCATATCAGGCGATTGGATTTCTCATAATAGTGTCTAGCAGAGCAAATGGTTTTGCAGAATGGATATTGATTTGAGGATTAATTTTTTCTCAATACAACCTCATGCAGATGATTTGAATAGATTCTTAAAGATGATATGCAAAGAACTTGGGCATTTTGATCGTTTTCATTAA
mRNA sequence
TTCTTAAAAAATCAAGATAAGTTAGAAAAGAATCTTGAGATATTAGATAAAGAGATGAGGCGAACGAATAAAGCAAGTAGAAGCTTGAAAAATGAAAAGACAACATTACAGACAACAATATAATCACAAGATGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTTGAGCTTGTCAATGATTTGAATACATCAATTGGAAAATGATAAGAACAAATAGAGCATTTGGAAGCACACAATCATTCTCTACGTCAAACTATTGATAGCCTACATGTGAAGATGGTCGAGCACTCTAAAGAGTATAAGATACTGAAAAATTATGTTGATTCCTTACACTATCAACTTACTGCATTTCAAAATTCAAGTGAGAGGATAGTGTAAACATACGAGTTATTGAAGACAGATTACATGAAAATGAAGGTTGATTATGATTTGTAAATGAGAGATTTTCAGGTGTTAGTTGAACGTGCATATCAGGCGATTGGATTTCTCATAATAGTGTCTAGCAGAGCAAATGGTTTTGCAGAATGGATATTGATTTGAGGATTAATTTTTTCTCAATACAACCTCATGCAGATGATTTGAATAGATTCTTAAAGATGATATGCAAAGAACTTGGGCATTTTGATCGTTTTCATTAA
Coding sequence (CDS)
TTCTTAAAAAATCAAGATAAGTTAGAAAAGAATCTTGAGATATTAGATAAAGAGATGAGGCGAACGAATAAAGCAAGTAGAAGCTTGAAAAATGAAAAGACAACATTACAGACAACAATATAATCACAAGATGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTTGAGCTTGTCAATGATTTGAATACATCAATTGGAAAATGATAAGAACAAATAGAGCATTTGGAAGCACACAATCATTCTCTACGTCAAACTATTGATAGCCTACATGTGAAGATGGTCGAGCACTCTAAAGAGTATAAGATACTGAAAAATTATGTTGATTCCTTACACTATCAACTTACTGCATTTCAAAATTCAAGTGAGAGGATAGTGTAAACATACGAGTTATTGAAGACAGATTACATGAAAATGAAGGTTGATTATGATTTGTAAATGAGAGATTTTCAGGTGTTAGTTGAACGTGCATATCAGGCGATTGGATTTCTCATAATAGTGTCTAGCAGAGCAAATGGTTTTGCAGAATGGATATTGATTTGAGGATTAATTTTTTCTCAATACAACCTCATGCAGATGATTTGAATAGATTCTTAAAGATGATATGCAAAGAACTTGGGCATTTTGATCGTTTTCATTAA
Protein sequence
FLKNQDKLEKNLEILDKEMRRTNKASRSLKNEKTTLQTTI*SQDEYIKDLESGKEYFLELVNDLNTSIGK**EQIEHLEAHNHSLRQTIDSLHVKMVEHSKEYKILKNYVDSLHYQLTAFQNSSERIV*TYELLKTDYMKMKVDYDL*MRDFQVLVERAYQAIGFLIIVSSRANGFAEWILI*GLIFSQYNLMQMI*IDS*R*YAKNLGILIVFIX
Homology
BLAST of Chy4G071800 vs. ExPASy TrEMBL
Match:
A0A5D3DJ95 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4336G00010 PE=4 SV=1)
HSP 1 Score: 264.2 bits (674), Expect = 4.7e-67
Identity = 138/179 (77.09%), Postives = 151/179 (84.36%), Query Frame = 0
Query: 1 FLKNQDKLEKNLEILDKEMRRTNKASRSLKNEKTTLQTTI*SQDEYIKDLESGKEYFLEL 60
FLKNQDKLEK++E LDKEMRR NKA+R LKNEKTTLQ T+ SQDEYIKDLE+GKEYFLEL
Sbjct: 111 FLKNQDKLEKDIETLDKEMRRMNKANRRLKNEKTTLQATVGSQDEYIKDLENGKEYFLEL 170
Query: 61 VNDLNTSIGK**EQIEHLEAHNHSLRQTIDSLHVKMVEHSKEYKILKNYVDSLHYQLTAF 120
VNDLNTSIGK QI LEA NHSL QT+DSLH+KM E S+EY+ILKNYVDSLHYQLTA
Sbjct: 171 VNDLNTSIGKRETQIMDLEAQNHSLHQTVDSLHLKMAERSEEYEILKNYVDSLHYQLTAL 230
Query: 121 QNSSERIV*TYELLKTDYMKMKVDYDL*MRDFQVLVERAYQAIGFLIIVSSRANGFAEW 180
QNSS+RI YE L TDY++MKVDYDL RDFQVLVER Q I FL +VS RANGFAEW
Sbjct: 231 QNSSKRITQEYESLNTDYVQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 289
BLAST of Chy4G071800 vs. ExPASy TrEMBL
Match:
A0A5D3D533 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold390G00200 PE=4 SV=1)
HSP 1 Score: 263.1 bits (671), Expect = 1.0e-66
Identity = 137/179 (76.54%), Postives = 152/179 (84.92%), Query Frame = 0
Query: 1 FLKNQDKLEKNLEILDKEMRRTNKASRSLKNEKTTLQTTI*SQDEYIKDLESGKEYFLEL 60
FLKNQDKLEK+LE DKEMRR NKA+RSLKNEKTTLQ T+ S+DEYIKDLE+GKEYFLEL
Sbjct: 159 FLKNQDKLEKDLETSDKEMRRMNKANRSLKNEKTTLQATVGSEDEYIKDLENGKEYFLEL 218
Query: 61 VNDLNTSIGK**EQIEHLEAHNHSLRQTIDSLHVKMVEHSKEYKILKNYVDSLHYQLTAF 120
VNDLNTSIGK QI LEA NHSLRQT+D+LH+KM E S+EY+ILKNYVDSLHYQLTA
Sbjct: 219 VNDLNTSIGKRETQIMDLEAQNHSLRQTVDNLHLKMAERSEEYEILKNYVDSLHYQLTAL 278
Query: 121 QNSSERIV*TYELLKTDYMKMKVDYDL*MRDFQVLVERAYQAIGFLIIVSSRANGFAEW 180
QNSS+RI YE L TDY++MKVDYDL RDFQVLVER Q I FL ++S RANGFAEW
Sbjct: 279 QNSSKRITQEYESLNTDYVQMKVDYDLQTRDFQVLVERVDQTIEFLRMMSKRANGFAEW 337
BLAST of Chy4G071800 vs. ExPASy TrEMBL
Match:
A0A5A7V9X6 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1576G00140 PE=4 SV=1)
HSP 1 Score: 261.5 bits (667), Expect = 3.0e-66
Identity = 138/179 (77.09%), Postives = 151/179 (84.36%), Query Frame = 0
Query: 1 FLKNQDKLEKNLEILDKEMRRTNKASRSLKNEKTTLQTTI*SQDEYIKDLESGKEYFLEL 60
FLKNQDKLEK+LE LDKEMRR NKA+RSLKNEKTTLQ T+ SQ+EYIKDLE+GKEYFLE
Sbjct: 134 FLKNQDKLEKDLETLDKEMRRMNKANRSLKNEKTTLQATVGSQNEYIKDLENGKEYFLER 193
Query: 61 VNDLNTSIGK**EQIEHLEAHNHSLRQTIDSLHVKMVEHSKEYKILKNYVDSLHYQLTAF 120
VNDLNTSIGK QI LEA NHSLRQT+DSLH+KM E S+EY+ILKNYV+SLHYQLTA
Sbjct: 194 VNDLNTSIGKRETQIMDLEAQNHSLRQTVDSLHLKMAECSEEYEILKNYVESLHYQLTAL 253
Query: 121 QNSSERIV*TYELLKTDYMKMKVDYDL*MRDFQVLVERAYQAIGFLIIVSSRANGFAEW 180
QNSS RI YE L TDY++MKVDYDL RDFQVLVER Q I FL +VS RANGFAEW
Sbjct: 254 QNSSRRITQEYESLNTDYVQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 312
BLAST of Chy4G071800 vs. ExPASy TrEMBL
Match:
A0A5D3DK34 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00110 PE=4 SV=1)
HSP 1 Score: 258.5 bits (659), Expect = 2.6e-65
Identity = 137/178 (76.97%), Postives = 150/178 (84.27%), Query Frame = 0
Query: 2 LKNQDKLEKNLEILDKEMRRTNKASRSLKNEKTTLQTTI*SQDEYIKDLESGKEYFLELV 61
LKNQDKLEKNLE LDKEMRR NKA+RSLKNEKTTL+ T+ S+DEYIKDLESGKEYFLE V
Sbjct: 243 LKNQDKLEKNLETLDKEMRRMNKANRSLKNEKTTLKATVGSEDEYIKDLESGKEYFLEFV 302
Query: 62 NDLNTSIGK**EQIEHLEAHNHSLRQTIDSLHVKMVEHSKEYKILKNYVDSLHYQLTAFQ 121
NDL+TSIG QI LEAHNHSLRQ +DSLH+KMVE S+EY+ILKNY DSLHYQL AFQ
Sbjct: 303 NDLHTSIGIRETQIMDLEAHNHSLRQIVDSLHLKMVERSEEYEILKNYPDSLHYQLIAFQ 362
Query: 122 NSSERIV*TYELLKTDYMKMKVDYDL*MRDFQVLVERAYQAIGFLIIVSSRANGFAEW 180
NSS+RI YE LKTDY++MKVDYDL RDFQVLVER Q I FL +VS RAN FAEW
Sbjct: 363 NSSKRITQEYESLKTDYVQMKVDYDLQTRDFQVLVERIDQTIKFLRMVSKRANVFAEW 420
BLAST of Chy4G071800 vs. ExPASy TrEMBL
Match:
A0A1S4DX26 (girdin-like OS=Cucumis melo OX=3656 GN=LOC107990936 PE=4 SV=1)
HSP 1 Score: 258.5 bits (659), Expect = 2.6e-65
Identity = 137/178 (76.97%), Postives = 150/178 (84.27%), Query Frame = 0
Query: 2 LKNQDKLEKNLEILDKEMRRTNKASRSLKNEKTTLQTTI*SQDEYIKDLESGKEYFLELV 61
LKNQDKLEKNLE LDKEMRR NKA+RSLKNEKTTL+ T+ S+DEYIKDLESGKEYFLE V
Sbjct: 169 LKNQDKLEKNLETLDKEMRRMNKANRSLKNEKTTLKATVGSEDEYIKDLESGKEYFLEFV 228
Query: 62 NDLNTSIGK**EQIEHLEAHNHSLRQTIDSLHVKMVEHSKEYKILKNYVDSLHYQLTAFQ 121
NDL+TSIG QI LEAHNHSLRQ +DSLH+KMVE S+EY+ILKNY DSLHYQL AFQ
Sbjct: 229 NDLHTSIGIRETQIMDLEAHNHSLRQIVDSLHLKMVERSEEYEILKNYPDSLHYQLIAFQ 288
Query: 122 NSSERIV*TYELLKTDYMKMKVDYDL*MRDFQVLVERAYQAIGFLIIVSSRANGFAEW 180
NSS+RI YE LKTDY++MKVDYDL RDFQVLVER Q I FL +VS RAN FAEW
Sbjct: 289 NSSKRITQEYESLKTDYVQMKVDYDLQTRDFQVLVERIDQTIKFLRMVSKRANVFAEW 346
BLAST of Chy4G071800 vs. NCBI nr
Match:
TYK23632.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 265 bits (676), Expect = 6.13e-85
Identity = 138/179 (77.09%), Postives = 151/179 (84.36%), Query Frame = 0
Query: 1 FLKNQDKLEKNLEILDKEMRRTNKASRSLKNEKTTLQTTI*SQDEYIKDLESGKEYFLEL 60
FLKNQDKLEK++E LDKEMRR NKA+R LKNEKTTLQ T+ SQDEYIKDLE+GKEYFLEL
Sbjct: 111 FLKNQDKLEKDIETLDKEMRRMNKANRRLKNEKTTLQATVGSQDEYIKDLENGKEYFLEL 170
Query: 61 VNDLNTSIGK**EQIEHLEAHNHSLRQTIDSLHVKMVEHSKEYKILKNYVDSLHYQLTAF 120
VNDLNTSIGK QI LEA NHSL QT+DSLH+KM E S+EY+ILKNYVDSLHYQLTA
Sbjct: 171 VNDLNTSIGKRETQIMDLEAQNHSLHQTVDSLHLKMAERSEEYEILKNYVDSLHYQLTAL 230
Query: 121 QNSSERIV*TYELLKTDYMKMKVDYDL*MRDFQVLVERAYQAIGFLIIVSSRANGFAEW 179
QNSS+RI YE L TDY++MKVDYDL RDFQVLVER Q I FL +VS RANGFAEW
Sbjct: 231 QNSSKRITQEYESLNTDYVQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 289
BLAST of Chy4G071800 vs. NCBI nr
Match:
TYK18656.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 263 bits (673), Expect = 7.62e-84
Identity = 137/179 (76.54%), Postives = 152/179 (84.92%), Query Frame = 0
Query: 1 FLKNQDKLEKNLEILDKEMRRTNKASRSLKNEKTTLQTTI*SQDEYIKDLESGKEYFLEL 60
FLKNQDKLEK+LE DKEMRR NKA+RSLKNEKTTLQ T+ S+DEYIKDLE+GKEYFLEL
Sbjct: 159 FLKNQDKLEKDLETSDKEMRRMNKANRSLKNEKTTLQATVGSEDEYIKDLENGKEYFLEL 218
Query: 61 VNDLNTSIGK**EQIEHLEAHNHSLRQTIDSLHVKMVEHSKEYKILKNYVDSLHYQLTAF 120
VNDLNTSIGK QI LEA NHSLRQT+D+LH+KM E S+EY+ILKNYVDSLHYQLTA
Sbjct: 219 VNDLNTSIGKRETQIMDLEAQNHSLRQTVDNLHLKMAERSEEYEILKNYVDSLHYQLTAL 278
Query: 121 QNSSERIV*TYELLKTDYMKMKVDYDL*MRDFQVLVERAYQAIGFLIIVSSRANGFAEW 179
QNSS+RI YE L TDY++MKVDYDL RDFQVLVER Q I FL ++S RANGFAEW
Sbjct: 279 QNSSKRITQEYESLNTDYVQMKVDYDLQTRDFQVLVERVDQTIEFLRMMSKRANGFAEW 337
BLAST of Chy4G071800 vs. NCBI nr
Match:
KAA0062685.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 262 bits (669), Expect = 1.44e-83
Identity = 138/179 (77.09%), Postives = 151/179 (84.36%), Query Frame = 0
Query: 1 FLKNQDKLEKNLEILDKEMRRTNKASRSLKNEKTTLQTTI*SQDEYIKDLESGKEYFLEL 60
FLKNQDKLEK+LE LDKEMRR NKA+RSLKNEKTTLQ T+ SQ+EYIKDLE+GKEYFLE
Sbjct: 134 FLKNQDKLEKDLETLDKEMRRMNKANRSLKNEKTTLQATVGSQNEYIKDLENGKEYFLER 193
Query: 61 VNDLNTSIGK**EQIEHLEAHNHSLRQTIDSLHVKMVEHSKEYKILKNYVDSLHYQLTAF 120
VNDLNTSIGK QI LEA NHSLRQT+DSLH+KM E S+EY+ILKNYV+SLHYQLTA
Sbjct: 194 VNDLNTSIGKRETQIMDLEAQNHSLRQTVDSLHLKMAECSEEYEILKNYVESLHYQLTAL 253
Query: 121 QNSSERIV*TYELLKTDYMKMKVDYDL*MRDFQVLVERAYQAIGFLIIVSSRANGFAEW 179
QNSS RI YE L TDY++MKVDYDL RDFQVLVER Q I FL +VS RANGFAEW
Sbjct: 254 QNSSRRITQEYESLNTDYVQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 312
BLAST of Chy4G071800 vs. NCBI nr
Match:
KAA0060422.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 257 bits (657), Expect = 2.23e-83
Identity = 135/179 (75.42%), Postives = 148/179 (82.68%), Query Frame = 0
Query: 1 FLKNQDKLEKNLEILDKEMRRTNKASRSLKNEKTTLQTTI*SQDEYIKDLESGKEYFLEL 60
FLKNQDKLEK+LE LDKEMRR +KA+RSLKNEKTTLQ T+ SQDEYIKDLE+GKEYFLE
Sbjct: 17 FLKNQDKLEKDLETLDKEMRRMDKANRSLKNEKTTLQATVGSQDEYIKDLENGKEYFLER 76
Query: 61 VNDLNTSIGK**EQIEHLEAHNHSLRQTIDSLHVKMVEHSKEYKILKNYVDSLHYQLTAF 120
VNDLNTSIGK QI LEA NHSLRQT+DSLH+KM E S+EY+ILKNY DSLHYQLTA
Sbjct: 77 VNDLNTSIGKRETQIMDLEAQNHSLRQTVDSLHLKMAECSEEYEILKNYADSLHYQLTAL 136
Query: 121 QNSSERIV*TYELLKTDYMKMKVDYDL*MRDFQVLVERAYQAIGFLIIVSSRANGFAEW 179
QNSS RI YE L DY++MKVDYD+ RDFQVLVER Q I FL +VS RANGF EW
Sbjct: 137 QNSSRRITQEYESLNIDYVQMKVDYDMETRDFQVLVERVDQTIEFLRMVSKRANGFVEW 195
BLAST of Chy4G071800 vs. NCBI nr
Match:
KAA0037780.1 (girdin-like [Cucumis melo var. makuwa] >TYK27303.1 girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 258 bits (659), Expect = 2.03e-82
Identity = 136/179 (75.98%), Postives = 150/179 (83.80%), Query Frame = 0
Query: 1 FLKNQDKLEKNLEILDKEMRRTNKASRSLKNEKTTLQTTI*SQDEYIKDLESGKEYFLEL 60
FLKNQDKLE +L+ LDKEMRR NKA+RSLKNEKTTLQ T+ SQDEYIKDLE+GKEYFLEL
Sbjct: 118 FLKNQDKLENDLKTLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLENGKEYFLEL 177
Query: 61 VNDLNTSIGK**EQIEHLEAHNHSLRQTIDSLHVKMVEHSKEYKILKNYVDSLHYQLTAF 120
VNDLNTSI K QI LEA NHSLRQTID+LH+KM E S+EY+ILKNY DSLH+QLTA
Sbjct: 178 VNDLNTSIVKRETQIMDLEAQNHSLRQTIDNLHLKMAERSEEYEILKNYADSLHFQLTAH 237
Query: 121 QNSSERIV*TYELLKTDYMKMKVDYDL*MRDFQVLVERAYQAIGFLIIVSSRANGFAEW 179
QNSS+RI YE L TDY++MKVDYDL RDFQVLVER Q I FL +VS RANGFAEW
Sbjct: 238 QNSSKRITQEYESLNTDYVQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 296
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DJ95 | 4.7e-67 | 77.09 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4336G00010 P... | [more] |
| A0A5D3D533 | 1.0e-66 | 76.54 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold390G00200 PE... | [more] |
| A0A5A7V9X6 | 3.0e-66 | 77.09 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1576G00140 P... | [more] |
| A0A5D3DK34 | 2.6e-65 | 76.97 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00110 PE... | [more] |
| A0A1S4DX26 | 2.6e-65 | 76.97 | girdin-like OS=Cucumis melo OX=3656 GN=LOC107990936 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
