Chy4G071320 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G071320
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Transmembrane protein
Location	chrH04: 3691568 .. 3691945 (+)
RNA-Seq Expression	Chy4G071320
Synteny	Chy4G071320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTGGGTGGTGGAGGAAAGAGGTCCTGAGTGGAAGTATGGATGGACAGAGAGAAAAATGTCTTCCATGTCTCTCCCGCCTATGCCACTGCTCGCATTCCTCGGCGTCGTAGTTCTTTTGCTTTCTTTGCAGTCTCAGCAGATGGTGTTGGACTTCAAGCTATTACTTTTGGCTTTGCCATTTTTGATGATCTTTGTTGCAAATTCTGTAGCTGTGTCTGGTACAGTTGGTTCTGCTTCCATGAGAACTAAGAGCAGGTCGGCTCAGGAGGCCGAGAGGACCTCACCTTGGGGCGCCGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTGTGGAACCGTCCTTACTTTAGGTCCAAGTGGTCACCTCCGTCGTAA

mRNA sequence

ATGAGTTGGGTGGTGGAGGAAAGAGGTCCTGAGTGGAAGTATGGATGGACAGAGAGAAAAATGTCTTCCATGTCTCTCCCGCCTATGCCACTGCTCGCATTCCTCGGCGTCGTAGTTCTTTTGCTTTCTTTGCAGTCTCAGCAGATGGTGTTGGACTTCAAGCTATTACTTTTGGCTTTGCCATTTTTGATGATCTTTGTTGCAAATTCTGTAGCTGTGTCTGGTACAGTTGGTTCTGCTTCCATGAGAACTAAGAGCAGGTCCAAGTGGTCACCTCCGTCGTAA

Coding sequence (CDS)

ATGAGTTGGGTGGTGGAGGAAAGAGGTCCTGAGTGGAAGTATGGATGGACAGAGAGAAAAATGTCTTCCATGTCTCTCCCGCCTATGCCACTGCTCGCATTCCTCGGCGTCGTAGTTCTTTTGCTTTCTTTGCAGTCTCAGCAGATGGTGTTGGACTTCAAGCTATTACTTTTGGCTTTGCCATTTTTGATGATCTTTGTTGCAAATTCTGTAGCTGTGTCTGGTACAGTTGGTTCTGCTTCCATGAGAACTAAGAGCAGGTCCAAGTGGTCACCTCCGTCGTAA

Protein sequence

MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLALPFLMIFVANSVAVSGTVGSASMRTKSRSKWSPPS*

Homology

[Close]

BLAST of Chy4G071320 vs. ExPASy TrEMBL
Match: A0A0A0LE80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872200 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.2e-37
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
          MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1  MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRS 89
          PFLMIFVANSVAVSGTVGSASMRTKSRS
Sbjct: 61 PFLMIFVANSVAVSGTVGSASMRTKSRS 88

[Close]

BLAST of Chy4G071320 vs. ExPASy TrEMBL
Match: A0A5A7V8G0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001100 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-35
Identity = 84/88 (95.45%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 1  MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
          MSWVVEERGPEWKYGWTERKM+SMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1  MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRS 89
          PFL+IF ANSVAVSGTVGSA+MRTKSRS
Sbjct: 61 PFLIIFFANSVAVSGTVGSAAMRTKSRS 88

[Close]

BLAST of Chy4G071320 vs. ExPASy TrEMBL
Match: A0A5D3E6P1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008040 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.5e-35
Identity = 83/88 (94.32%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1  MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
          MSWVVEERGPEWKYGWTERKM+SMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1  MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRS 89
          PF +IF ANSVAVSGTVGSA+MRTKSRS
Sbjct: 61 PFFIIFFANSVAVSGTVGSAAMRTKSRS 88

[Close]

BLAST of Chy4G071320 vs. ExPASy TrEMBL
Match: A0A6J1FL09 (uncharacterized protein LOC111446211 OS=Cucurbita moschata OX=3662 GN=LOC111446211 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 6.0e-27
Identity = 67/88 (76.14%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 1  MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
          MSW  EER PEWKYGW ER ++SMS PPMPLLAFLGVV+LLLSLQSQ+M LDFKL LLAL
Sbjct: 1  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLAL 60

Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRS 89
          PFL+IF+ANS+ VSG+V S +MRTK+RS
Sbjct: 61 PFLLIFIANSLLVSGSVASTAMRTKNRS 88

[Close]

BLAST of Chy4G071320 vs. ExPASy TrEMBL
Match: A0A2P5F7W0 (Transmembrane protein OS=Trema orientale OX=63057 GN=TorRG33x02_102820 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.7e-11
Identity = 46/94 (48.94%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 1  MSWVVEE-RGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQS--------QQMVL 60
          M W + E     WK GWTER ++S+S PP+PL+A +G+VV+LLS+ S        QQ ++
Sbjct: 1  MGWFLREGSSSSWKVGWTERTLASLSAPPLPLVAIVGIVVVLLSISSYANYKSQVQQTMI 60

Query: 61 DFKLLLLALPFLMIFVANSVAVSGTVGSASMRTK 86
           FKL LL LP L+IF+ANSV   G+V   S RTK
Sbjct: 61 GFKLFLLFLPLLLIFLANSVTKYGSVYIISPRTK 94

[Close]

BLAST of Chy4G071320 vs. NCBI nr
Match: KGN60038.1 (hypothetical protein Csa_001668 [Cucumis sativus])

HSP 1 Score: 164 bits (414), Expect = 5.59e-50
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
          MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1  MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRS 88
          PFLMIFVANSVAVSGTVGSASMRTKSRS
Sbjct: 61 PFLMIFVANSVAVSGTVGSASMRTKSRS 88

[Close]

BLAST of Chy4G071320 vs. NCBI nr
Match: KAA0063287.1 (hypothetical protein E6C27_scaffold205G001100 [Cucumis melo var. makuwa])

HSP 1 Score: 158 bits (399), Expect = 1.08e-47
Identity = 84/88 (95.45%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 1  MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
          MSWVVEERGPEWKYGWTERKM+SMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1  MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRS 88
          PFL+IF ANSVAVSGTVGSA+MRTKSRS
Sbjct: 61 PFLIIFFANSVAVSGTVGSAAMRTKSRS 88

[Close]

BLAST of Chy4G071320 vs. NCBI nr
Match: TYK31488.1 (hypothetical protein E5676_scaffold455G008040 [Cucumis melo var. makuwa])

HSP 1 Score: 156 bits (395), Expect = 4.39e-47
Identity = 83/88 (94.32%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1  MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
          MSWVVEERGPEWKYGWTERKM+SMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1  MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRS 88
          PF +IF ANSVAVSGTVGSA+MRTKSRS
Sbjct: 61 PFFIIFFANSVAVSGTVGSAAMRTKSRS 88

[Close]

BLAST of Chy4G071320 vs. NCBI nr
Match: XP_022940699.1 (uncharacterized protein LOC111446211 [Cucurbita moschata])

HSP 1 Score: 129 bits (324), Expect = 2.11e-36
Identity = 67/88 (76.14%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 1  MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
          MSW  EER PEWKYGW ER ++SMS PPMPLLAFLGVV+LLLSLQSQ+M LDFKL LLAL
Sbjct: 1  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLAL 60

Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRS 88
          PFL+IF+ANS+ VSG+V S +MRTK+RS
Sbjct: 61 PFLLIFIANSLLVSGSVASTAMRTKNRS 88

[Close]

BLAST of Chy4G071320 vs. NCBI nr
Match: KAG7037914.1 (hypothetical protein SDJN02_01545, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127 bits (320), Expect = 8.57e-36
Identity = 66/88 (75.00%), Postives = 76/88 (86.36%), Query Frame = 0


Query: 1  MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
          MSW  EER PEWKYGW ER ++SMS PPMPLLAFLGVV+LLLSLQSQ+M  DFKL LLAL
Sbjct: 1  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLAL 60

Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRS 88
          PFL+IF+ANS+ VSG+V S +MRTK+RS
Sbjct: 61 PFLLIFIANSLLVSGSVASTAMRTKNRS 88

[Close]

BLAST of Chy4G071320 vs. TAIR 10
Match: AT5G42146.1 (unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 1.5e-06
Identity = 31/81 (38.27%), Postives = 45/81 (55.56%), Query Frame = 0


Query: 1  MSWVVEE-RGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQS--------QQMVL 60
          M W ++E RG  WK GW E  + + S PP+ LLA L ++ LLL L S        ++   
Sbjct: 1  MGWFIKERRGGSWKRGWLEETLLTSSAPPLTLLALLAIISLLLFLSSYPRYKYEVEKTAA 60

Query: 61 DFKLLLLALPFLMIFVANSVA 73
          + KL +L LP L +FV  S++
Sbjct: 61 NLKLFMLFLPILFVFVLVSLS 81

The following BLAST results are available for this feature:

BLAST of Chy4G071320 vs.


Match Name	E-value	Identity	Description

BLAST of Chy4G071320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE80	2.2e-37	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872200 PE=4 SV=1	[more]
A0A5A7V8G0	1.2e-35	95.45	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E6P1	3.5e-35	94.32	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1FL09	6.0e-27	76.14	uncharacterized protein LOC111446211 OS=Cucurbita moschata OX=3662 GN=LOC1114462...	[more]
A0A2P5F7W0	2.7e-11	48.94	Transmembrane protein OS=Trema orientale OX=63057 GN=TorRG33x02_102820 PE=4 SV=1	[more]

BLAST of Chy4G071320 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60038.1	5.59e-50	100.00	hypothetical protein Csa_001668 [Cucumis sativus]	[more]
KAA0063287.1	1.08e-47	95.45	hypothetical protein E6C27_scaffold205G001100 [Cucumis melo var. makuwa]	[more]
TYK31488.1	4.39e-47	94.32	hypothetical protein E5676_scaffold455G008040 [Cucumis melo var. makuwa]	[more]
XP_022940699.1	2.11e-36	76.14	uncharacterized protein LOC111446211 [Cucurbita moschata]	[more]
KAG7037914.1	8.57e-36	75.00	hypothetical protein SDJN02_01545, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Chy4G071320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42146.1	1.5e-06	38.27	unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33306:SF26	PROTEIN, PUTATIVE-RELATED	coord: 1..90
None	No IPR available	PANTHER	PTHR33306	EXPRESSED PROTEIN-RELATED-RELATED	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G071320.1	Chy4G071320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane