Chy4G071150 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCGGTACCACAGAGTTGAGAAGCCAAGGGCTGAGACTCCAATTGACGAGAATGAAATTCGGATTACTAGCCAAGGACGGATGCGTAACTATATCACTTATGCCATGACCCTACTTCAGGTTTCTTTCAGATGCCTTTTTAGATTTTTGACTTTTTTTTTCTTTCTTTTTTTCTCTTATGCTCTTAATTCATTCATACTGTGAATTCCTTGATGTCAAACGCTGTGTCTCTCGATGAAATTTTCAAATTCTGGGTTCTGTTTGGGTATCTGGTGTGCTGATACTAGTAATTGTGTTGGGTACATCGAGCTGTTTGGTACAAATAAATTGTTTGCTTATTTTTACCATGTGTTATGTGCAATTATCTCTGTACTTTGGGATTTTTTTTTCATTGTTCTGAGAAATATTCCCGTGTTATCATACTGTGGTGGGATATGCTCTCCCTTGCTCGGGTTTGGTAGTGGAACACTTCGGAAAGTTCACTTTGGTGTAACATATGACACGCCGCTATTAATGTATGGCTCTAGGTGGTTTCTAGCTTAAAATATATTTCTCTGGGGTTTAATCAATCTCGATATTGGTCTTCTTTTACACGCTTCAGTGTAACGAGTCTTCATAGGCATTTATTTTAGGTTATGTTGCTTCAAAAACTTAAGGCAGCCTCACGGTTTTTTTCTTGAAGAGATGAGTTAAATTTTTTTAAACAAAAGGTAGGGATGTCATGAAAGAAAGCCATGTAGTATGAAGCATTATGATTATGCTAGTATGCAAAAAGATCGTGTCCGTATATTTATTAATCAGAGAAGGCATTGCACAAGTAGATGAAAAGACCGACATCAGATTCCCTTTTTTCCATTTTTATGCTAATCAATGCACGGTAGTATGTTATGTATGACACACACTTGACATTTTTTAGTTGTTTATAACCTACCCTTGTTTATAAATAATGCAGGAAAAAGGTTCTAATGAAATTGTTTTCAAAGCAATGGGAAGGGCTATAAACAAGACTGTGACAATTGTGGAATTAATCAAGGTTTGCTATTATAGTTCATTTTGCTGATGCTGACCCACTTGATTACTTTTGAGATTGGGCTTGATAATATGTTTGTTGTTAAATGTAGAGGCGAATTGTGGGTCTTCATCAGAACACGTCAATTGGCTCCACAGACATCACTGATACATGGGAGCCCTTGGAGGAAGGCCTTCTTCCGTAAGAGTCTTTTAAACAACAAGAAATGCAAGGATTATTTATTCCAGGCTTTTACTTTCTATGTATTACCACATTCATTATTTCATTGAGTTATTTGATTGTTGTTACAGATTGGAAACAACAAGGCATGTCTCGATGATTGTGATAACCCTTTCGAAGAAGGAATTGAATAAATCCTCTGTAGGGTGAGTCCTTATACTATGATTATTTCAATTCAAAATTTAAAATAATCATGCTCAATGAAATGATGATGGGCTGTTGAACTCGTATGTGGATCTTGTCATTTTTTTTATTATATGACTGGTCTCTGGCATTGAATTAAACAAAACCTTAAGTTCACCTGCTCTCTCAGATTTGGTTGTTAAAAATATTCAGATATGCAGGGTTTTGATTATAAAGGTTCTGTGGGTTGAACGTGTTACTAATAATTTAGAAAGTTCCCATGGTATTTGCTTAAGAAGTCTTTAGATTTGTTAATCTTCATCTCTGAATAGTGGTCTTTAGATTTGTTAATCTTCATCTCTGAATAGTGGAAAAGCTTTCCACAAATGAGCTGTGTCTCACAAGTTACTTTTGCTTCAGGTATCAGCCTCCACTTCCTGCGGAGCTGGTGAAAACATTTGTAGAGTATGACTATGAGGGAGGTATTGGCCTCTCCTATCATCTTTTTTATTATCAAACTCTTTTGCATTGCAAAGTGGAGAGTTGATAGTTGATGTATTCTGCAGAAGGCTCACCTCATGATCAGGGTCCGGGACGAGGTAGAGGACGTGGTCGTAATGGCAGAGGAAGGTCTAGGGGTAGAGGTAGGTAGAGCTAAATTTCATTCTTCATTCTTAAGATCTTCGTCATGTTACTGTATATGGAAGATTATGACTTTTATTGCTGGTCAGAGACTTCAGTACTAACACAAGGAATCGGAATATGGATGTAATTGATTCAATTTCTTAGCATCATGGAGAGTATGTACGCCCTCATAACAATTCGTTTTTGTTCTTAAATCTTACTGGTTATAGGACCCCCAGGTAATGGCTTTGTGGCTAATGAATATGATGATGGAGATTGGGACCGTAATAGGGGTGGTAATGGAAGAGGAAGGGGTCGAGGGAGAAGTGGTAATTTCCGTGGACGTGGAAGAGGAGGATACAATGGACCTCAATTTGATTTACAACAAGATGGAGGATACAACCAAGACATGCCACCAGCTCAAGGCCGTGGTATTTCCTTATTTCCTTTTTCTGTATGTTTCATATAATTGATCTTTTGATTAGCCTATTCAGCAGTGCTGGGATATATGCCGACTGTGGTCATTGTTTATCTTAAGCTTATCTAAGTTGGGGTGTCCCTTTCTCTAATACATTAGTACATTTGAATGTCAATTGTGTAAAATGGAACTGTCATGTCCCACTGTTCTTGTTGGTGTACAGTAAAATTGGTTATTTTTCAGGGCGTGGACGTGGAAGGGGTGGATATCGTGGGAGGGGCCGTGGTTTCAGGACTAATGGAGGACCGATCCAAGCCGCTGCATGA ATGGATCGGTACCACAGAGTTGAGAAGCCAAGGGCTGAGACTCCAATTGACGAGAATGAAATTCGGATTACTAGCCAAGGACGGATGCGTAACTATATCACTTATGCCATGACCCTACTTCAGGAAAAAGGTTCTAATGAAATTGTTTTCAAAGCAATGGGAAGGGCTATAAACAAGACTGTGACAATTGTGGAATTAATCAAGAGGCGAATTGTGGGTCTTCATCAGAACACGTCAATTGGCTCCACAGACATCACTGATACATGGGAGCCCTTGGAGGAAGGCCTTCTTCCATTGGAAACAACAAGGCATGTCTCGATGATTGTGATAACCCTTTCGAAGAAGGAATTGAATAAATCCTCTGTAGGGTATCAGCCTCCACTTCCTGCGGAGCTGGTGAAAACATTTGTAGAGTATGACTATGAGGGAGAAGGCTCACCTCATGATCAGGGTCCGGGACGAGGTAGAGGACGTGGTCGTAATGGCAGAGGAAGGTCTAGGGGTAGAGGACCCCCAGGTAATGGCTTTGTGGCTAATGAATATGATGATGGAGATTGGGACCGTAATAGGGGTGGTAATGGAAGAGGAAGGGGTCGAGGGAGAAGTGGTAATTTCCGTGGACGTGGAAGAGGAGGATACAATGGACCTCAATTTGATTTACAACAAGATGGAGGATACAACCAAGACATGCCACCAGCTCAAGGCCGTGGGCGTGGACGTGGAAGGGGTGGATATCGTGGGAGGGGCCGTGGTTTCAGGACTAATGGAGGACCGATCCAAGCCGCTGCATGA ATGGATCGGTACCACAGAGTTGAGAAGCCAAGGGCTGAGACTCCAATTGACGAGAATGAAATTCGGATTACTAGCCAAGGACGGATGCGTAACTATATCACTTATGCCATGACCCTACTTCAGGAAAAAGGTTCTAATGAAATTGTTTTCAAAGCAATGGGAAGGGCTATAAACAAGACTGTGACAATTGTGGAATTAATCAAGAGGCGAATTGTGGGTCTTCATCAGAACACGTCAATTGGCTCCACAGACATCACTGATACATGGGAGCCCTTGGAGGAAGGCCTTCTTCCATTGGAAACAACAAGGCATGTCTCGATGATTGTGATAACCCTTTCGAAGAAGGAATTGAATAAATCCTCTGTAGGGTATCAGCCTCCACTTCCTGCGGAGCTGGTGAAAACATTTGTAGAGTATGACTATGAGGGAGAAGGCTCACCTCATGATCAGGGTCCGGGACGAGGTAGAGGACGTGGTCGTAATGGCAGAGGAAGGTCTAGGGGTAGAGGACCCCCAGGTAATGGCTTTGTGGCTAATGAATATGATGATGGAGATTGGGACCGTAATAGGGGTGGTAATGGAAGAGGAAGGGGTCGAGGGAGAAGTGGTAATTTCCGTGGACGTGGAAGAGGAGGATACAATGGACCTCAATTTGATTTACAACAAGATGGAGGATACAACCAAGACATGCCACCAGCTCAAGGCCGTGGGCGTGGACGTGGAAGGGGTGGATATCGTGGGAGGGGCCGTGGTTTCAGGACTAATGGAGGACCGATCCAAGCCGCTGCATGA MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVITLSKKELNKSSVGYQPPLPAELVKTFVEYDYEGEGSPHDQGPGRGRGRGRNGRGRSRGRGPPGNGFVANEYDDGDWDRNRGGNGRGRGRGRSGNFRGRGRGGYNGPQFDLQQDGGYNQDMPPAQGRGRGRGRGGYRGRGRGFRTNGGPIQAAA* Homology
BLAST of Chy4G071150 vs. ExPASy Swiss-Prot
Match: Q99JH1 (Ribonuclease P protein subunit p25-like protein OS=Mus musculus OX=10090 GN=Rpp25l PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 9.8e-16 Identity = 47/136 (34.56%), Postives = 70/136 (51.47%), Query Frame = 0
BLAST of Chy4G071150 vs. ExPASy Swiss-Prot
Match: Q8N5L8 (Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25L PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.9e-15 Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 0
BLAST of Chy4G071150 vs. ExPASy Swiss-Prot
Match: Q2KIR4 (Ribonuclease P protein subunit p25-like protein OS=Bos taurus OX=9913 GN=RPP25L PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 7.8e-13 Identity = 50/160 (31.25%), Postives = 76/160 (47.50%), Query Frame = 0
BLAST of Chy4G071150 vs. ExPASy Swiss-Prot
Match: Q91WE3 (Ribonuclease P protein subunit p25 OS=Mus musculus OX=10090 GN=Rpp25 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.0e-12 Identity = 39/117 (33.33%), Postives = 60/117 (51.28%), Query Frame = 0
BLAST of Chy4G071150 vs. ExPASy Swiss-Prot
Match: Q5PPN2 (Ribonuclease P protein subunit p25 OS=Rattus norvegicus OX=10116 GN=Rpp25 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.0e-12 Identity = 39/117 (33.33%), Postives = 60/117 (51.28%), Query Frame = 0
BLAST of Chy4G071150 vs. ExPASy TrEMBL
Match: A0A0A0LJ75 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G874340 PE=4 SV=1) HSP 1 Score: 504.6 bits (1298), Expect = 2.5e-139 Identity = 262/264 (99.24%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of Chy4G071150 vs. ExPASy TrEMBL
Match: A0A5A7V7U0 (Ribonuclease P protein subunit p25-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001350 PE=4 SV=1) HSP 1 Score: 501.9 bits (1291), Expect = 1.6e-138 Identity = 262/264 (99.24%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of Chy4G071150 vs. ExPASy TrEMBL
Match: A0A1S3CRB9 (ribonuclease P protein subunit p25-like protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503859 PE=4 SV=1) HSP 1 Score: 501.9 bits (1291), Expect = 1.6e-138 Identity = 262/264 (99.24%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of Chy4G071150 vs. ExPASy TrEMBL
Match: A0A1S3CRH3 (ribonuclease P protein subunit p25-like protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503859 PE=4 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 1.2e-136 Identity = 261/264 (98.86%), Postives = 261/264 (98.86%), Query Frame = 0
BLAST of Chy4G071150 vs. ExPASy TrEMBL
Match: A0A6J1ILQ2 (ribonuclease P protein subunit p25-like protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476415 PE=4 SV=1) HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134 Identity = 256/264 (96.97%), Postives = 257/264 (97.35%), Query Frame = 0
BLAST of Chy4G071150 vs. NCBI nr
Match: XP_004136371.1 (ribonuclease P protein subunit p25-like protein [Cucumis sativus] >KAE8651349.1 hypothetical protein Csa_002424 [Cucumis sativus]) HSP 1 Score: 506 bits (1302), Expect = 2.98e-180 Identity = 262/264 (99.24%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of Chy4G071150 vs. NCBI nr
Match: XP_008466463.1 (PREDICTED: ribonuclease P protein subunit p25-like protein isoform X1 [Cucumis melo]) HSP 1 Score: 503 bits (1295), Expect = 3.35e-179 Identity = 262/264 (99.24%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of Chy4G071150 vs. NCBI nr
Match: KAA0063310.1 (ribonuclease P protein subunit p25-like protein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 503 bits (1295), Expect = 4.66e-179 Identity = 262/264 (99.24%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of Chy4G071150 vs. NCBI nr
Match: XP_038900199.1 (ribonuclease P protein subunit p25-like protein isoform X1 [Benincasa hispida]) HSP 1 Score: 501 bits (1290), Expect = 1.94e-178 Identity = 261/264 (98.86%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of Chy4G071150 vs. NCBI nr
Match: XP_008466464.1 (PREDICTED: ribonuclease P protein subunit p25-like protein isoform X2 [Cucumis melo]) HSP 1 Score: 496 bits (1278), Expect = 1.26e-176 Identity = 261/264 (98.86%), Postives = 261/264 (98.86%), Query Frame = 0
BLAST of Chy4G071150 vs. TAIR 10
Match: AT1G20220.1 (Alba DNA/RNA-binding protein ) HSP 1 Score: 309.7 bits (792), Expect = 2.3e-84 Identity = 199/317 (62.78%), Postives = 216/317 (68.14%), Query Frame = 0
BLAST of Chy4G071150 vs. TAIR 10
Match: AT1G76010.1 (Alba DNA/RNA-binding protein ) HSP 1 Score: 307.8 bits (787), Expect = 8.7e-84 Identity = 192/281 (68.33%), Postives = 208/281 (74.02%), Query Frame = 0
BLAST of Chy4G071150 vs. TAIR 10
Match: AT3G07030.1 (Alba DNA/RNA-binding protein ) HSP 1 Score: 154.1 bits (388), Expect = 1.6e-37 Identity = 131/321 (40.81%), Postives = 158/321 (49.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|