Chy4G070990 (gene) Cucumber (hystrix) v1

Overview
NameChy4G070990
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionSucrose-phosphate synthase
LocationchrH04: 3366078 .. 3367175 (-)
RNA-Seq ExpressionChy4G070990
SyntenyChy4G070990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGAAATTATTCGGTGAACAGTTGCTTAGAGGCCATACTTGACGTTGGGCCTCGACTTGACGATGCCAAAGCGTTGCTTCTGCTGAGGGAGAGAGGGCATTTCAGTCCTACTCGAAGGAGGTTATTACTGGTTTCGGTGAGACCGATCTCTATCGCTCTTGGATTCGAGTACGAAAGTTTGATTACTGTTCTTCTTTTGGTTGTTTAGAGGTGGTTTTTTAATGTGAATTCTTCTTCTCGTCGATTTATGCTGCGGCTACGAGGAGTCCGCAGGAGAGGAACACGAGGCTGGAGGATTTGGAATTTGGCGCGAAAGAAGAAGTAGGTCTGTTTTCTACATCTCTTCTTTGTTTATTCTATACTTCAGTGTTCGTCGATTGAAATTTTACAATATGATTATCTATAATATGTACGATTTAACTCTTGCTGCGGTAGACGAATGCACTTGTGTTTCTGAAAGGATAATAGATGAAATCGGAGTTGTGTGAATCCGTCTGATGACTTATTTCATATGATCAAATGAATATTTGTGGAGTGAAACTATTTTTTTGTATTGTGGTTGATTTTCTTTTCTTAAACGAAGTAAGCATATGTACTGCATTGAATTGAAGATACGAAGGGATAATCTTTTGAGACTGAATGGATGTAGTCAGGAAATCAATGAAACAGAGTTTTTGAACCTCATGGATTCTTCGAAATTAGGGCATGTTGGAGAATTGGTTCCAGAATATTGTTGTGAGTCAATCAGAAACTTAGATGTTCACTAGGATACGGTGCAGTATCTCACCATTGGTAGTAGTTTCTTATAAAATTCAATCTCATTTTGTTTCATTGAATTGTTACTCCAAAATATTTTCCATGTACTCCTTTTGCCACTGTATGTTGAAACCATCACTGAGATTAGAATTATGAAATGAACTGGATATAAGTGATGTATGTTTGCAGGGACCCTGCTATCTAGATTCATATGTGTTGTGACCATTCTTTTGCAGTGATCATTTTTGTTCTTTTATAATCAGGCTATTTTTTGGAAACTAAAATGATTAGATCTTTATCAATTTCATTCATGCCGTTTGAACATCAGATTAGTTGA

mRNA sequence

ATGGCGGGAAATTATTCGGTGAACAGTTGCTTAGAGGCCATACTTGACGTTGGGCCTCGACTTGACGATGCCAAAGCGTTGCTTCTGCTGAGGGAGAGAGGGCATTTCAGTCCTACTCGAAGGAGGTTATTACTGGTTTCGGTGAGACCGATCTCTATCGCTCTTGGATTCGAGTACGAAAGCTATTTTTTGGAAACTAAAATGATTAGATCTTTATCAATTTCATTCATGCCGTTTGAACATCAGATTAGTTGA

Coding sequence (CDS)

ATGGCGGGAAATTATTCGGTGAACAGTTGCTTAGAGGCCATACTTGACGTTGGGCCTCGACTTGACGATGCCAAAGCGTTGCTTCTGCTGAGGGAGAGAGGGCATTTCAGTCCTACTCGAAGGAGGTTATTACTGGTTTCGGTGAGACCGATCTCTATCGCTCTTGGATTCGAGTACGAAAGCTATTTTTTGGAAACTAAAATGATTAGATCTTTATCAATTTCATTCATGCCGTTTGAACATCAGATTAGTTGA

Protein sequence

MAGNYSVNSCLEAILDVGPRLDDAKALLLLRERGHFSPTRRRLLLVSVRPISIALGFEYESYFLETKMIRSLSISFMPFEHQIS*
Homology
[Close]
BLAST of Chy4G070990 vs. ExPASy Swiss-Prot
Match: O22060 (Probable sucrose-phosphate synthase 1 OS=Citrus unshiu OX=55188 GN=SPS1 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 7.6e-10
Identity = 32/40 (80.00%), Postives = 34/40 (85.00%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRLDDAKALLLLRERGHFSPTR 41
          MAGN  +NS LEAILDVGP LDDAK+ LLLRERG FSPTR
Sbjct: 1  MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTR 40

[Close]
BLAST of Chy4G070990 vs. ExPASy Swiss-Prot
Match: P49031 (Probable sucrose-phosphate synthase OS=Beta vulgaris OX=161934 GN=SPS PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 7.6e-10
Identity = 32/40 (80.00%), Postives = 34/40 (85.00%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRLDDAKALLLLRERGHFSPTR 41
          MAGN  +NS LEAILDVGP LDDAK+ LLLRERG FSPTR
Sbjct: 1  MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTR 40

[Close]
BLAST of Chy4G070990 vs. ExPASy Swiss-Prot
Match: Q43876 (Probable sucrose-phosphate synthase OS=Vicia faba OX=3906 GN=SPS PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-09
Identity = 32/40 (80.00%), Postives = 34/40 (85.00%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRLDDAKALLLLRERGHFSPTR 41
          MAGN  +NS LEAILDVGP LDDAK+ LLLRERG FSPTR
Sbjct: 1  MAGNDWLNSYLEAILDVGPGLDDAKSSLLLRERGRFSPTR 40

[Close]
BLAST of Chy4G070990 vs. ExPASy Swiss-Prot
Match: Q43845 (Probable sucrose-phosphate synthase OS=Solanum tuberosum OX=4113 GN=SPS PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-09
Identity = 31/40 (77.50%), Postives = 33/40 (82.50%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRLDDAKALLLLRERGHFSPTR 41
          MAGN  +NS LEAILDVGP LDD K+ LLLRERG FSPTR
Sbjct: 1  MAGNDWINSYLEAILDVGPGLDDKKSSLLLRERGRFSPTR 40

[Close]
BLAST of Chy4G070990 vs. ExPASy Swiss-Prot
Match: O04932 (Probable sucrose-phosphate synthase 1 OS=Craterostigma plantagineum OX=4153 GN=SPS1 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.9e-09
Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRLDDAKALLLLRERGHFSPTR 41
          MAGN  +NS LEAILDVGP +D+AK  LLLRERG FSPTR
Sbjct: 1  MAGNDWINSYLEAILDVGPGIDEAKGSLLLRERGRFSPTR 40

[Close]
BLAST of Chy4G070990 vs. ExPASy TrEMBL
Match: A0A6J1IET6 (Sucrose-phosphate synthase OS=Cucurbita maxima OX=3661 GN=LOC111476601 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-08
Identity = 35/40 (87.50%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRLDDAKALLLLRERGHFSPTR 41
          MAGN  VNS LEAILDVGP LDDAKA LLLRERGHFSPTR
Sbjct: 1  MAGNDWVNSYLEAILDVGPGLDDAKASLLLRERGHFSPTR 40

[Close]
BLAST of Chy4G070990 vs. ExPASy TrEMBL
Match: W9RB11 (Sucrose-phosphate synthase OS=Morus notabilis OX=981085 GN=L484_008507 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.5e-08
Identity = 34/40 (85.00%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRLDDAKALLLLRERGHFSPTR 41
          MAGN  VNS LEAILDVGP LDDAK+ LLLRERGHFSPTR
Sbjct: 1  MAGNDWVNSYLEAILDVGPNLDDAKSSLLLRERGHFSPTR 40

[Close]
BLAST of Chy4G070990 vs. ExPASy TrEMBL
Match: A0A6J1FFA4 (Sucrose-phosphate synthase OS=Cucurbita moschata OX=3662 GN=LOC111443549 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.3e-08
Identity = 34/40 (85.00%), Postives = 34/40 (85.00%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRLDDAKALLLLRERGHFSPTR 41
          MAGN  VNS LEAILDVGP LDDAK  LLLRERGHFSPTR
Sbjct: 1  MAGNDWVNSYLEAILDVGPGLDDAKTSLLLRERGHFSPTR 40

[Close]
BLAST of Chy4G070990 vs. ExPASy TrEMBL
Match: A0A2P5B1N9 (Sucrose-phosphate synthase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_279610 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.3e-08
Identity = 32/40 (80.00%), Postives = 34/40 (85.00%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRLDDAKALLLLRERGHFSPTR 41
          MAGN  +NS LEAILDVGP LDD K+ LLLRERGHFSPTR
Sbjct: 1  MAGNDWINSYLEAILDVGPALDDVKSSLLLRERGHFSPTR 40

[Close]
BLAST of Chy4G070990 vs. ExPASy TrEMBL
Match: A0A6A2XF26 (Sucrose-phosphate synthase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111758pilonHSYRG00065 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.3e-08
Identity = 33/40 (82.50%), Postives = 34/40 (85.00%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRLDDAKALLLLRERGHFSPTR 41
          MAGN  +NS LEAILDVGP LDDAKA LLLRERG FSPTR
Sbjct: 1  MAGNDWINSYLEAILDVGPNLDDAKASLLLRERGRFSPTR 40

[Close]
BLAST of Chy4G070990 vs. NCBI nr
Match: XP_023536026.1 (probable sucrose-phosphate synthase 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 67.4 bits (163), Expect = 1.04e-10
Identity = 35/40 (87.50%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRLDDAKALLLLRERGHFSPTR 40
          MAGN  VNS LEAILDVGP LDDAKA LLLRERGHFSPTR
Sbjct: 1  MAGNDWVNSYLEAILDVGPGLDDAKASLLLRERGHFSPTR 40

[Close]
BLAST of Chy4G070990 vs. NCBI nr
Match: XP_022976097.1 (probable sucrose-phosphate synthase 1 [Cucurbita maxima])

HSP 1 Score: 67.4 bits (163), Expect = 1.04e-10
Identity = 35/40 (87.50%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRLDDAKALLLLRERGHFSPTR 40
          MAGN  VNS LEAILDVGP LDDAKA LLLRERGHFSPTR
Sbjct: 1  MAGNDWVNSYLEAILDVGPGLDDAKASLLLRERGHFSPTR 40

[Close]
BLAST of Chy4G070990 vs. NCBI nr
Match: PWA66152.1 (sucrose phosphate synthase [Artemisia annua])

HSP 1 Score: 62.4 bits (150), Expect = 1.30e-10
Identity = 32/40 (80.00%), Postives = 33/40 (82.50%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRLDDAKALLLLRERGHFSPTR 40
          MAGN  +NS LEAILDVGP LDDAK  LLLRERG FSPTR
Sbjct: 1  MAGNDWINSYLEAILDVGPGLDDAKTSLLLRERGRFSPTR 40

[Close]
BLAST of Chy4G070990 vs. NCBI nr
Match: EXC28554.1 (hypothetical protein L484_005397 [Morus notabilis])

HSP 1 Score: 64.3 bits (155), Expect = 1.31e-10
Identity = 32/40 (80.00%), Postives = 34/40 (85.00%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRLDDAKALLLLRERGHFSPTR 40
          MAGN  +NS LEAILDVGP LDD K+ LLLRERGHFSPTR
Sbjct: 1  MAGNDWINSYLEAILDVGPGLDDVKSSLLLRERGHFSPTR 40

[Close]
BLAST of Chy4G070990 vs. NCBI nr
Match: XP_024023596.1 (probable sucrose-phosphate synthase 1 [Morus notabilis])

HSP 1 Score: 67.0 bits (162), Expect = 1.42e-10
Identity = 34/40 (85.00%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRLDDAKALLLLRERGHFSPTR 40
          MAGN  VNS LEAILDVGP LDDAK+ LLLRERGHFSPTR
Sbjct: 1  MAGNDWVNSYLEAILDVGPNLDDAKSSLLLRERGHFSPTR 40

[Close]
BLAST of Chy4G070990 vs. TAIR 10
Match: AT5G20280.1 (sucrose phosphate synthase 1F )

HSP 1 Score: 52.8 bits (125), Expect = 1.6e-07
Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRLDDAKA--LLLLRERGHFSPTR 41
          MAGN  VNS LEAILDVG  LDDA++   LLLRERG F+P+R
Sbjct: 1  MAGNDWVNSYLEAILDVGQGLDDARSSPSLLLRERGRFTPSR 42

[Close]
BLAST of Chy4G070990 vs. TAIR 10
Match: AT5G11110.1 (sucrose phosphate synthase 2F )

HSP 1 Score: 46.6 bits (109), Expect = 1.2e-05
Identity = 27/48 (56.25%), Postives = 30/48 (62.50%), Query Frame = 0 

Query: 1  MAGNYSVNSCLEAILDVGPRL--------DDAKALLLLRERGHFSPTR 41
          M GN  VNS LEAIL   P +         D+K+ LLLRERGHFSPTR
Sbjct: 1  MVGNDWVNSYLEAILAAEPGIANSKPPGTGDSKSSLLLRERGHFSPTR 48

The following BLAST results are available for this feature:
BLAST of Chy4G070990 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O220607.6e-1080.00Probable sucrose-phosphate synthase 1 OS=Citrus unshiu OX=55188 GN=SPS1 PE=2 SV=... [more]
P490317.6e-1080.00Probable sucrose-phosphate synthase OS=Beta vulgaris OX=161934 GN=SPS PE=2 SV=1[more]
Q438761.3e-0980.00Probable sucrose-phosphate synthase OS=Vicia faba OX=3906 GN=SPS PE=2 SV=1[more]
Q438452.9e-0977.50Probable sucrose-phosphate synthase OS=Solanum tuberosum OX=4113 GN=SPS PE=2 SV=... [more]
O049324.9e-0975.00Probable sucrose-phosphate synthase 1 OS=Craterostigma plantagineum OX=4153 GN=S... [more]
BLAST of Chy4G070990 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IET61.1e-0887.50Sucrose-phosphate synthase OS=Cucurbita maxima OX=3661 GN=LOC111476601 PE=3 SV=1[more]
W9RB111.5e-0885.00Sucrose-phosphate synthase OS=Morus notabilis OX=981085 GN=L484_008507 PE=3 SV=1[more]
A0A6J1FFA43.3e-0885.00Sucrose-phosphate synthase OS=Cucurbita moschata OX=3662 GN=LOC111443549 PE=3 SV... [more]
A0A2P5B1N97.3e-0880.00Sucrose-phosphate synthase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_279610... [more]
A0A6A2XF267.3e-0882.50Sucrose-phosphate synthase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111758pi... [more]
BLAST of Chy4G070990 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023536026.11.04e-1087.50probable sucrose-phosphate synthase 1 [Cucurbita pepo subsp. pepo][more]
XP_022976097.11.04e-1087.50probable sucrose-phosphate synthase 1 [Cucurbita maxima][more]
PWA66152.11.30e-1080.00sucrose phosphate synthase [Artemisia annua][more]
EXC28554.11.31e-1080.00hypothetical protein L484_005397 [Morus notabilis][more]
XP_024023596.11.42e-1085.00probable sucrose-phosphate synthase 1 [Morus notabilis][more]
BLAST of Chy4G070990 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G20280.11.6e-0769.05sucrose phosphate synthase 1F [more]
AT5G11110.11.2e-0556.25sucrose phosphate synthase 2F [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G070990.1Chy4G070990.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005986 sucrose biosynthetic process
molecular_function GO:0046524 sucrose-phosphate synthase activity
molecular_function GO:0016157 sucrose synthase activity