Chy4G070650 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G070650
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	DNA-directed RNA polymerase subunit beta
Location	chrH04: 3093307 .. 3095389 (-)
RNA-Seq Expression	Chy4G070650
Synteny	Chy4G070650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATGTTGTTCGTCCTTATCCGCGGCTCCTTCATCTATGTCTTTGATTACCAACCGCAAATTCACGAGTTCTGTCAATAAACCTCTGATTGTTTCCATGAATTCTCGCTTCAGAGCTTCTGCAGAAGTTCCCGATTTTCTTCCTGCTGACTGGTACGCATAAATTTCTCTTTTCCCTGTTTCATTTTCATTTCTCGAGTTTTGACGTCGCAGTATTGTATAGAGTTTGATCTCGAGAGAAATAGGAAGATGATGATGATTATGTTATTATTCGATTGTGTATCCACATGCCTGAATTTTCGACCAACTCGTGCTTTTATCGAGAAAGATGACGATTGTGTTTGATTTTGATCAATCAGGCTTCCCCGTTTGGTTAATGCGACAAATTTCTTCTTTATGTCTCATTCGGCGATGTTAACGTATATAGGCATAAATCTTCGCGTAGAAACTAAATTTATTCTTCATAGGATTGTTCGTGACGAGTTAATAATTTTATCTGGTGTTGGAATTCAGATTCCTGCTTTAGTTTCTCCATTCTTCCTCGGGCCAAACAGTTTCATGAAAACTAACTATCTCCACTCATACTCTTCTGCAGGCACGATGCACACAAGAAGGATCCTATAGGTCCAAGACTACATGTAACTGTTCAACTATGCAAGTTAGTACTAGATTTTGTAGTTTTTTCTCTGTCAAGATCTTCATCTTGAAACTATCTATATAGTTCACTGCAGAAGAAGCTATTCAACACCAGCTAGATGCACTGAGATACAATGATCGTCCCCACCAAGATTATGGAATTGAAGTCATGTACCAGGTAGTGAATTATGAAGAGTTTTTGTTTTTTTTTTCTCTTTCATATTGAATACTTGTTTATTGACATGGTGGTCTGTAAATTAAACATATCTCAACAAATCACAGTTTGCGGGGTTCGATCCTCTTCGAAGGTCAACATATTTCGGTCCCTTCTTTGATTTGGGACAGGTATCATTTGAAACTTCAGCAATTTATATGTGCAATACTGTATCTGCTCAGTGTTTTCATGATTTGCTACATTTTTGACAGTGCAGTTTGAAAGATTTAGACGAGTATTCCACCATTCAACTTATCGTGTATTGTTAGGCCATAAAGAGAGAAAGATCTTGAGCAGTTTGTTTGTAGAGGAGGTACATCATGCTCCATATTGGACTTGATTGATTCATATATTTATTATCAGACATGCTTAAGTTCAGCTCTATTTAGCTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGGATACTTTCTTTGCCTGTAAATTTATTTTCTGTAGAATAATATTGTGCCGATTTACAAACTCTGAAACAGAACCGATTCAAGCAGCGGGTATGGGTACGAGGTTGTCGCCCCAAGGAAGAAGAAATATTTCAATTCACCATGGTTCAGGTTAGGCTATGCCATTTTTAATTGGTTGGAACTTGAGAGTGATCGTTAGTAGTTCTGCACATAAATGCTTATTTCACTAAACTTTATAATAAAGGAATTCTTATGATTATTAAGTTGATAACTGTTCTCTCATCAAATAACATCTTTGGAGAATTTGAACCTGAGATCGTCTTCCATTCCCAACCGAACATGCTTTCTTAGACTTCAATTAGTTGCCATTATATAATTGTTGTTTCTTTCTGGGATCAGCCGTGACTATTACATGTACAGGTTGAAACTATTATATGTCTATCTACAGCAGTGCATCACTGCCTCCTGCATGCTATATATATAATACATATATTGATATTCGTGAGTGCTTGGTCAAGTCCAAGTACCCTGACTATTCTCACCGGACACCTACAATATCAAATTGTACATATGAATATTGTTGAAAAGAGGCCTACAGTCACCCGGCAAGGACACGATGTGCCACATACATGCTAGATGACACTGCTTAAGTTGAGAGAACTTGTCGAAATATGAATACACGGCCTTGAATAATGAAAGGAATTTTGGTGTTGATTTGCAGAGGGTTGGCGGCTCGTGGGATGGGTATTGGCTTACAGAGAGTTTACTAAACGATGGGGATGCATTTAGTGGAGGCTTAGCTTATTAA

mRNA sequence

ATGTCATGTTGTTCGTCCTTATCCGCGGCTCCTTCATCTATGTCTTTGATTACCAACCGCAAATTCACGAGTTCTGTCAATAAACCTCTGATTGTTTCCATGAATTCTCGCTTCAGAGCTTCTGCAGAAGTTCCCGATTTTCTTCCTGCTGACTGGCACGATGCACACAAGAAGGATCCTATAGGTCCAAGACTACATTTCACTGCAGAAGAAGCTATTCAACACCAGCTAGATGCACTGAGATACAATGATCGTCCCCACCAAGATTATGGAATTGAAGTCATGTACCAGTTTGCGGGGTTCGATCCTCTTCGAAGGTCAACATATTTCGGTCCCTTCTTTGATTTGGGACAGTTTGAAAGATTTAGACGAGTATTCCACCATTCAACTTATCGTGTATTGTTAGGCCATAAAGAGAGAAAGATCTTGAGCAGTTTGTTTGTAGAGGAGAACCGATTCAAGCAGCGGGTATGGGTACGAGGTTGTCGCCCCAAGGAAGAAGAAATATTTCAATTCACCATGGTTCAGAGGGTTGGCGGCTCGTGGGATGGGTATTGGCTTACAGAGAGTTTACTAAACGATGGGGATGCATTTAGTGGAGGCTTAGCTTATTAA

Coding sequence (CDS)

ATGTCATGTTGTTCGTCCTTATCCGCGGCTCCTTCATCTATGTCTTTGATTACCAACCGCAAATTCACGAGTTCTGTCAATAAACCTCTGATTGTTTCCATGAATTCTCGCTTCAGAGCTTCTGCAGAAGTTCCCGATTTTCTTCCTGCTGACTGGCACGATGCACACAAGAAGGATCCTATAGGTCCAAGACTACATTTCACTGCAGAAGAAGCTATTCAACACCAGCTAGATGCACTGAGATACAATGATCGTCCCCACCAAGATTATGGAATTGAAGTCATGTACCAGTTTGCGGGGTTCGATCCTCTTCGAAGGTCAACATATTTCGGTCCCTTCTTTGATTTGGGACAGTTTGAAAGATTTAGACGAGTATTCCACCATTCAACTTATCGTGTATTGTTAGGCCATAAAGAGAGAAAGATCTTGAGCAGTTTGTTTGTAGAGGAGAACCGATTCAAGCAGCGGGTATGGGTACGAGGTTGTCGCCCCAAGGAAGAAGAAATATTTCAATTCACCATGGTTCAGAGGGTTGGCGGCTCGTGGGATGGGTATTGGCTTACAGAGAGTTTACTAAACGATGGGGATGCATTTAGTGGAGGCTTAGCTTATTAA

Protein sequence

MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDPIGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFERFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWVRGCRPKEEEIFQFTMVQRVGGSWDGYWLTESLLNDGDAFSGGLAY*

Homology

[Close]

BLAST of Chy4G070650 vs. ExPASy TrEMBL
Match: A0A0A0LED5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878870 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 9.7e-115
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP 60
           MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP 60

Query: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWVRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVW+RGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 205
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of Chy4G070650 vs. ExPASy TrEMBL
Match: A0A5D3E6H6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007270 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.4e-113
Identity = 200/204 (98.04%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP 60
           MSCCSSLSAAPSSMSLITNRKFTSSVNKP+ VSMNSRFR SAEVPDFLPADWHDAHKKDP
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPVTVSMNSRFRVSAEVPDFLPADWHDAHKKDP 60

Query: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWVRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVW+RGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 205
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of Chy4G070650 vs. ExPASy TrEMBL
Match: A0A1S3CR52 (uncharacterized protein LOC103503805 OS=Cucumis melo OX=3656 GN=LOC103503805 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.4e-113
Identity = 200/204 (98.04%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP 60
           MSCCSSLSAAPSSMSLITNRKFTSSVNKP+ VSMNSRFR SAEVPDFLPADWHDAHKKDP
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPVTVSMNSRFRVSAEVPDFLPADWHDAHKKDP 60

Query: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWVRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVW+RGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 205
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of Chy4G070650 vs. ExPASy TrEMBL
Match: A0A6J1BWI6 (uncharacterized protein LOC111005365 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005365 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 5.7e-107
Identity = 189/204 (92.65%), Postives = 198/204 (97.06%), Query Frame = 0


Query: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP 60
           MSCCSSLSAAP+SMSLIT RKF  +V+KP IVSMNSRFRASAEVPDFLPADW++AHKK+P
Sbjct: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60

Query: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           +GP LHFTAEEAIQHQLDALRYND+PHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWVRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS LFVEENRFKQRVW+RGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 205
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of Chy4G070650 vs. ExPASy TrEMBL
Match: A0A6J1IYU2 (uncharacterized protein LOC111480415 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480415 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.8e-106
Identity = 188/204 (92.16%), Postives = 197/204 (96.57%), Query Frame = 0


Query: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP 60
           MSCCSSLSAAP+SMSLI+ RKFT SVNK +IVSMNSRFRASAEVPDFLPADWH AHKK+P
Sbjct: 1   MSCCSSLSAAPTSMSLISKRKFTRSVNKHVIVSMNSRFRASAEVPDFLPADWHQAHKKNP 60

Query: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           +GP LHFTAEEAIQ QLDALRYNDRPHQDYGIEVMYQFAGF+PL+RSTYFGPFFDLGQFE
Sbjct: 61  LGPSLHFTAEEAIQRQLDALRYNDRPHQDYGIEVMYQFAGFNPLQRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWVRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILSSL VEENRFKQRVW+RGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLIVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 205
           SWDGYWLTES+LNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESVLNDGDAFSGGLAY 204

[Close]

BLAST of Chy4G070650 vs. NCBI nr
Match: XP_004136341.2 (uncharacterized protein LOC101205248 isoform X1 [Cucumis sativus])

HSP 1 Score: 422 bits (1086), Expect = 2.62e-149
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP 60
           MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP 60

Query: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWVRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVW+RGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of Chy4G070650 vs. NCBI nr
Match: XP_008466381.1 (PREDICTED: uncharacterized protein LOC103503805 [Cucumis melo] >KAA0038797.1 uncharacterized protein E6C27_scaffold92G003520 [Cucumis melo var. makuwa] >TYK31418.1 uncharacterized protein E5676_scaffold455G007270 [Cucumis melo var. makuwa])

HSP 1 Score: 418 bits (1074), Expect = 1.77e-147
Identity = 200/204 (98.04%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP 60
           MSCCSSLSAAPSSMSLITNRKFTSSVNKP+ VSMNSRFR SAEVPDFLPADWHDAHKKDP
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPVTVSMNSRFRVSAEVPDFLPADWHDAHKKDP 60

Query: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWVRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVW+RGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of Chy4G070650 vs. NCBI nr
Match: XP_038898556.1 (uncharacterized protein LOC120086152 [Benincasa hispida])

HSP 1 Score: 414 bits (1065), Expect = 2.26e-145
Identity = 199/204 (97.55%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP 60
           MSCCSSLSAAP+SMSLITNRKFTSSVNKP+IVSM SRFRASAEVPDFLPADWHDAHKKDP
Sbjct: 48  MSCCSSLSAAPTSMSLITNRKFTSSVNKPVIVSMYSRFRASAEVPDFLPADWHDAHKKDP 107

Query: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 108 IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 167

Query: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWVRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILSSLFVEEN FKQRVW+RGCRPKEEEIFQFTMVQRVGG
Sbjct: 168 RFRRVFHHSTYRVLLGHKERKILSSLFVEENLFKQRVWIRGCRPKEEEIFQFTMVQRVGG 227

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 228 SWDGYWLTESLLNDGDAFSGGLAY 251

[Close]

BLAST of Chy4G070650 vs. NCBI nr
Match: XP_022132533.1 (uncharacterized protein LOC111005365 isoform X1 [Momordica charantia])

HSP 1 Score: 397 bits (1019), Expect = 4.31e-139
Identity = 189/204 (92.65%), Postives = 198/204 (97.06%), Query Frame = 0


Query: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP 60
           MSCCSSLSAAP+SMSLIT RKF  +V+KP IVSMNSRFRASAEVPDFLPADW++AHKK+P
Sbjct: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60

Query: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           +GP LHFTAEEAIQHQLDALRYND+PHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWVRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS LFVEENRFKQRVW+RGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of Chy4G070650 vs. NCBI nr
Match: XP_022981205.1 (uncharacterized protein LOC111480415 isoform X1 [Cucurbita maxima])

HSP 1 Score: 394 bits (1011), Expect = 7.15e-138
Identity = 188/204 (92.16%), Postives = 197/204 (96.57%), Query Frame = 0


Query: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP 60
           MSCCSSLSAAP+SMSLI+ RKFT SVNK +IVSMNSRFRASAEVPDFLPADWH AHKK+P
Sbjct: 1   MSCCSSLSAAPTSMSLISKRKFTRSVNKHVIVSMNSRFRASAEVPDFLPADWHQAHKKNP 60

Query: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           +GP LHFTAEEAIQ QLDALRYNDRPHQDYGIEVMYQFAGF+PL+RSTYFGPFFDLGQFE
Sbjct: 61  LGPSLHFTAEEAIQRQLDALRYNDRPHQDYGIEVMYQFAGFNPLQRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWVRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILSSL VEENRFKQRVW+RGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLIVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTES+LNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESVLNDGDAFSGGLAY 204

[Close]

BLAST of Chy4G070650 vs. TAIR 10
Match: AT2G25605.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 75 Blast hits to 75 proteins in 20 species: Archae - 2; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). )

HSP 1 Score: 288.5 bits (737), Expect = 4.2e-78
Identity = 135/198 (68.18%), Postives = 165/198 (83.33%), Query Frame = 0


Query: 7   LSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDPIGPRLH 66
           L + PSS+S   N K  +   +   ++ N    +S++VPDFL ADW ++ +K P GPRL 
Sbjct: 8   LPSPPSSLS--ANVKHFNGYGR---LNRNLVRASSSDVPDFLSADWLESRRKRPFGPRLD 67

Query: 67  FTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFERFRRVF 126
           F+AE+A++HQLDAL+YND P  DYGIEVMY+FAGFDP  RSTYFGPFFDLGQFERFRR+F
Sbjct: 68  FSAEDAVRHQLDALKYNDHPRDDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIF 127

Query: 127 HHSTYRVLLGHKERKILSSLFVEENRFKQRVWVRGCRPKEEEIFQFTMVQRVGGSWDGYW 186
           HHS+YRVLLGHK+RK+LSSLFVEENRFKQR+W++G RP+EEEIF+FTM QR+GGSWDGYW
Sbjct: 128 HHSSYRVLLGHKDRKLLSSLFVEENRFKQRIWIQGNRPEEEEIFEFTMFQRIGGSWDGYW 187

Query: 187 LTESLLNDGDAFSGGLAY 205
           LTESLL+DGD FSGG+AY
Sbjct: 188 LTESLLHDGDVFSGGMAY 200

The following BLAST results are available for this feature:

BLAST of Chy4G070650 vs.


Match Name	E-value	Identity	Description

BLAST of Chy4G070650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LED5	9.7e-115	99.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878870 PE=4 SV=1	[more]
A0A5D3E6H6	2.4e-113	98.04	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CR52	2.4e-113	98.04	uncharacterized protein LOC103503805 OS=Cucumis melo OX=3656 GN=LOC103503805 PE=...	[more]
A0A6J1BWI6	5.7e-107	92.65	uncharacterized protein LOC111005365 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1IYU2	4.8e-106	92.16	uncharacterized protein LOC111480415 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Chy4G070650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136341.2	2.62e-149	99.51	uncharacterized protein LOC101205248 isoform X1 [Cucumis sativus]	[more]
XP_008466381.1	1.77e-147	98.04	PREDICTED: uncharacterized protein LOC103503805 [Cucumis melo] >KAA0038797.1 unc...	[more]
XP_038898556.1	2.26e-145	97.55	uncharacterized protein LOC120086152 [Benincasa hispida]	[more]
XP_022132533.1	4.31e-139	92.65	uncharacterized protein LOC111005365 isoform X1 [Momordica charantia]	[more]
XP_022981205.1	7.15e-138	92.16	uncharacterized protein LOC111480415 isoform X1 [Cucurbita maxima]	[more]

BLAST of Chy4G070650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25605.1	4.2e-78	68.18	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35716	OS05G0574700 PROTEIN-RELATED	coord: 1..204
None	No IPR available	PANTHER	PTHR35716:SF1	OS05G0574700 PROTEIN	coord: 1..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G070650.1	Chy4G070650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032774	RNA biosynthetic process
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity