Chy4G069560 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G069560
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Homeobox-leucine zipper protein ATHB-6-like
Location	chrH04: 2150756 .. 2151604 (+)
RNA-Seq Expression	Chy4G069560
Synteny	Chy4G069560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGATTTAGCCACTCAGATTCCTTAGATTCCTTCTTCTCCTTCTTCTCCCCTAAAGGTAAACAATCCTCAAAATCAAAATACCCATAAGAAAGAAGAAAAAAACAGAATGATCTTTTATATTTCTTGGGTTATAAAAGTACTTTTTTTTAATTCTTGTAGATCAGCAACCAAATTCCAAAGGCATAGGCGGTTACAGCAAGGAGTTTCAAGCAATGTTAGACAGTTTAGAGGAAGAAGACAACAGCGAAGACGGGGGGAGCAGTGGGGGTTCGGCACCGGAGAGGAAACGTCGGCTGAAATTGGATCAAGTGAAGGGTTTAGAGAGACATTTTGAAGTGGAAAACAAACTTGAACCAGACAGAAAAATGAAGATCGCAGCTGAATTAGAACTTGAACCAAGACAAGTTACAATTTGGTTTCAAAATCGAAGAGCTCGATGGAAAACCAAGCAATTAGAGAAAGATTATGGAGTTCTTAAACTAAATTACGATGCTCTTAAACTTGATTATGATGTTCTTGAAAAAGAAAATGCTTCTCTTGCTTCAAAGGTAATGATATCAAATCATCTCCATTTTCAACTTGGGTTTCTTCTTTAGATTAATGAAAATAAATTCTCTTCTTTGCTTTTCTTTGTTCTTGTTGCAGGTGAAAGAGTTGAGGGAGAAAGTAAACAGAGAAATGAAAAAAGGGTCAATGGAGAGAGATTCAAACAGAGATGGGAATTCATATATTTCAATGTTGAATAGTAATAATCAAATCCAATTTACAAAGGCTATGAATGAGGATCAAAGTTTGGTTAATTTCTGTTCTGTTGATCAAGCTCCTTCTCTCCATTATTGGTAA

mRNA sequence

ATGAAGAGATTTAGCCACTCAGATTCCTTAGATTCCTTCTTCTCCTTCTTCTCCCCTAAAGATCAGCAACCAAATTCCAAAGGCATAGGCGGTTACAGCAAGGAGTTTCAAGCAATGTTAGACAGTTTAGAGGAAGAAGACAACAGCGAAGACGGGGGGAGCAGTGGGGGTTCGGCACCGGAGAGGAAACGTCGGCTGAAATTGGATCAAGTGAAGGGTTTAGAGAGACATTTTGAAGTGGAAAACAAACTTGAACCAGACAGAAAAATGAAGATCGCAGCTGAATTAGAACTTGAACCAAGACAAGTTACAATTTGGTTTCAAAATCGAAGAGCTCGATGGAAAACCAAGCAATTAGAGAAAGATTATGGAGTTCTTAAACTAAATTACGATGCTCTTAAACTTGATTATGATGTTCTTGAAAAAGAAAATGCTTCTCTTGCTTCAAAGGTGAAAGAGTTGAGGGAGAAAGTAAACAGAGAAATGAAAAAAGGGTCAATGGAGAGAGATTCAAACAGAGATGGGAATTCATATATTTCAATGTTGAATAGTAATAATCAAATCCAATTTACAAAGGCTATGAATGAGGATCAAAGTTTGGTTAATTTCTGTTCTGTTGATCAAGCTCCTTCTCTCCATTATTGGTAA

Coding sequence (CDS)

ATGAAGAGATTTAGCCACTCAGATTCCTTAGATTCCTTCTTCTCCTTCTTCTCCCCTAAAGATCAGCAACCAAATTCCAAAGGCATAGGCGGTTACAGCAAGGAGTTTCAAGCAATGTTAGACAGTTTAGAGGAAGAAGACAACAGCGAAGACGGGGGGAGCAGTGGGGGTTCGGCACCGGAGAGGAAACGTCGGCTGAAATTGGATCAAGTGAAGGGTTTAGAGAGACATTTTGAAGTGGAAAACAAACTTGAACCAGACAGAAAAATGAAGATCGCAGCTGAATTAGAACTTGAACCAAGACAAGTTACAATTTGGTTTCAAAATCGAAGAGCTCGATGGAAAACCAAGCAATTAGAGAAAGATTATGGAGTTCTTAAACTAAATTACGATGCTCTTAAACTTGATTATGATGTTCTTGAAAAAGAAAATGCTTCTCTTGCTTCAAAGGTGAAAGAGTTGAGGGAGAAAGTAAACAGAGAAATGAAAAAAGGGTCAATGGAGAGAGATTCAAACAGAGATGGGAATTCATATATTTCAATGTTGAATAGTAATAATCAAATCCAATTTACAAAGGCTATGAATGAGGATCAAAGTTTGGTTAATTTCTGTTCTGTTGATCAAGCTCCTTCTCTCCATTATTGGTAA

Protein sequence

MKRFSHSDSLDSFFSFFSPKDQQPNSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAPERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSMERDSNRDGNSYISMLNSNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW*

Homology

[Close]

BLAST of Chy4G069560 vs. ExPASy Swiss-Prot
Match: P46668 (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.6e-35
Identity = 86/164 (52.44%), Postives = 116/164 (70.73%), Query Frame = 0


Query: 1   MKRFSHSDSLDSFFSF---FSPKDQQPNSKGIGGYSKEFQAMLDSLEEEDNS--EDGGSS 60
           MKR S SDS+    S     S  +Q P   G     +EFQ+ML+  EEE+ +  E+ G  
Sbjct: 2   MKRLSSSDSVGGLISLCPTTSTDEQSPRRYG----GREFQSMLEGYEEEEEAIVEERGHV 61

Query: 61  GGSAPERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWK 120
           G S  E+KRRL ++QVK LE++FE+ENKLEP+RK+K+A EL L+PRQV +WFQNRRARWK
Sbjct: 62  GLS--EKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 121

Query: 121 TKQLEKDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVN 160
           TKQLEKDYGVLK  YD+L+ ++D L ++N SL  ++ +L+ K+N
Sbjct: 122 TKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLN 159

[Close]

BLAST of Chy4G069560 vs. ExPASy Swiss-Prot
Match: P46667 (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.0e-34
Identity = 92/198 (46.46%), Postives = 131/198 (66.16%), Query Frame = 0


Query: 7   SDSLDSFFSF-FSPKDQQPNSK---------GIGGYSKEFQAMLDSLEEEDNSEDGGSSG 66
           SDSL  F     S  D+Q + +         G G YS+    M D+LE++ + ED G  G
Sbjct: 8   SDSLSGFLPIRHSTTDKQISPRPTTTGFLYSGAGDYSQ----MFDALEDDGSLEDLGGVG 67

Query: 67  ---GSAPERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRAR 126
               +A E+KRRL ++QVK LE++FE++NKLEP+RK+K+A EL L+PRQV IWFQNRRAR
Sbjct: 68  HASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRAR 127

Query: 127 WKTKQLEKDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSMERDSNR 186
           WKTKQLE+DYGVLK N+DALK + D L+++N SL  ++KEL+ K+N E  KG  E  + +
Sbjct: 128 WKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVEGVKGIEENGALK 187

Query: 187 DGNSYISMLNSNNQIQFT 192
              +  S++ +N  ++ +
Sbjct: 188 AVEANQSVMANNEVLELS 201

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BLAST of Chy4G069560 vs. ExPASy Swiss-Prot
Match: Q940J1 (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-16 PE=2 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 2.9e-34
Identity = 83/164 (50.61%), Postives = 110/164 (67.07%), Query Frame = 0


Query: 1   MKRFSHSDSLDSFFSFFSPKDQQPNSKGIGGYSKEFQAMLDSLEEED---NSEDGGSSGG 60
           MKR S SDS+    S  S  +Q P      GY   +Q+ML+  +E+        G     
Sbjct: 1   MKRLSSSDSMCGLIS-TSTDEQSPR-----GYGSNYQSMLEGYDEDATLIEEYSGNHHHM 60

Query: 61  SAPERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTK 120
              E+KRRLK+DQVK LE++FE+ENKLEP+RK K+A EL L+PRQV +WFQNRRARWKTK
Sbjct: 61  GLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTK 120

Query: 121 QLEKDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRE 162
           QLEKDYGVLK  YD+L+ ++D L ++N SL  ++ +++ KVN E
Sbjct: 121 QLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGE 158

[Close]

BLAST of Chy4G069560 vs. ExPASy Swiss-Prot
Match: Q9XH37 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.7e-30
Identity = 70/149 (46.98%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 22  QQPNSKGIGGYSKEFQAMLDS---------LEEEDNSEDGGSSGGSAPERKRRLKLDQVK 81
           ++P   G GG S     M +S         +E E + E+   + G   E+KRRL ++QV+
Sbjct: 2   KRPGGAGGGGGSPSLVTMANSSDDGYGGVGMEAEGDVEEEMMACGGGGEKKRRLSVEQVR 61

Query: 82  GLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLNYDA 141
            LER FEVENKLEP+RK ++A +L L+PRQV +WFQNRRARWKTKQLE+DY  L+ +YD+
Sbjct: 62  ALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDS 121

Query: 142 LKLDYDVLEKENASLASKVKELREKVNRE 162
           L+LD+D L ++  +L +++KEL+ K+  E
Sbjct: 122 LRLDHDALRRDKDALLAEIKELKAKLGDE 150

[Close]

BLAST of Chy4G069560 vs. ExPASy Swiss-Prot
Match: Q6K498 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.7e-30
Identity = 70/149 (46.98%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 22  QQPNSKGIGGYSKEFQAMLDS---------LEEEDNSEDGGSSGGSAPERKRRLKLDQVK 81
           ++P   G GG S     M +S         +E E + E+   + G   E+KRRL ++QV+
Sbjct: 2   KRPGGAGGGGGSPSLVTMANSSDDGYGGVGMEAEGDVEEEMMACGGGGEKKRRLSVEQVR 61

Query: 82  GLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLNYDA 141
            LER FEVENKLEP+RK ++A +L L+PRQV +WFQNRRARWKTKQLE+DY  L+ +YD+
Sbjct: 62  ALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDS 121

Query: 142 LKLDYDVLEKENASLASKVKELREKVNRE 162
           L+LD+D L ++  +L +++KEL+ K+  E
Sbjct: 122 LRLDHDALRRDKDALLAEIKELKAKLGDE 150

[Close]

BLAST of Chy4G069560 vs. ExPASy TrEMBL
Match: A0A0A0LHK6 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889880 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.5e-110
Identity = 210/215 (97.67%), Postives = 211/215 (98.14%), Query Frame = 0


Query: 1   MKRFSHSDSLDSFFSFFSPKDQQPNSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRFSHSDSLDSF SFFSPKDQQ NSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQQNSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSMERDSNRDGNSYIS 180
           KDY VLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSME+DSNRDGNSYIS
Sbjct: 121 KDYEVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSMEKDSNRDGNSYIS 180

Query: 181 MLNSNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 216
           MLNSNNQ QFTKAMNEDQSLVNFCSVDQAPSLHYW
Sbjct: 181 MLNSNNQFQFTKAMNEDQSLVNFCSVDQAPSLHYW 215

[Close]

BLAST of Chy4G069560 vs. ExPASy TrEMBL
Match: A0A5A7TAR1 (Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G002330 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.1e-108
Identity = 211/217 (97.24%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MKRFSHSDSLDSFFSFFSPKDQQPNSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRFSHSDSLDSF SFFSPKDQQPNSK IGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSMERDSNRDG-NSYI 180
           KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNR MKKGSMERDSNRDG NSYI
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDSNRDGNNSYI 180

Query: 181 SML-NSNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 216
           SML N+NNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW
Sbjct: 181 SMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 217

[Close]

BLAST of Chy4G069560 vs. ExPASy TrEMBL
Match: A0A5D3E5X1 (Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006000 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.7e-107
Identity = 211/218 (96.79%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 1   MKRFSHSDSLDSFFSFFSPKDQQPNSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRFSHSDSLDSF SFFSPKDQQPNSK IGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSMER-DSNRDG-NSY 180
           KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNR MKKGSMER DSNRDG NSY
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDDSNRDGNNSY 180

Query: 181 ISML-NSNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 216
           ISML N+NNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW
Sbjct: 181 ISMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 218

[Close]

BLAST of Chy4G069560 vs. ExPASy TrEMBL
Match: A0A1S3CRT3 (homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo OX=3656 GN=LOC103504010 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.7e-107
Identity = 211/218 (96.79%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 1   MKRFSHSDSLDSFFSFFSPKDQQPNSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRFSHSDSLDSF SFFSPKDQQPNSK IGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSMER-DSNRDG-NSY 180
           KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNR MKKGSMER DSNRDG NSY
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDDSNRDGNNSY 180

Query: 181 ISML-NSNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 216
           ISML N+NNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW
Sbjct: 181 ISMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 218

[Close]

BLAST of Chy4G069560 vs. ExPASy TrEMBL
Match: A0A6J1FIN2 (homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita moschata OX=3662 GN=LOC111446073 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.7e-80
Identity = 174/237 (73.42%), Postives = 189/237 (79.75%), Query Frame = 0


Query: 1   MKRFSHSDSLDSFFSFFSPKDQQPNSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           M RF  S+SLDSF S F+PK +QP+S  IGGYSKEFQAMLDSLEEEDNSEDGG S GSAP
Sbjct: 2   MMRFDRSESLDSFSSIFTPK-EQPSSTTIGGYSKEFQAMLDSLEEEDNSEDGGGSSGSAP 61

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRLK DQVK LERHFEVENKLEP+RKMKIA ELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 62  ERKRRLKPDQVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQLE 121

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSMERDSNRDGNSYI- 180
           +DYGVLK NYDALKLDYDVLEKENASLASKV+ELREKV+RE  K  ++R+   + NS++ 
Sbjct: 122 RDYGVLKANYDALKLDYDVLEKENASLASKVRELREKVSREGTKMKIQRELKDEKNSFVS 181

Query: 181 --------SMLNS--------NNQIQFTKAMNEDQSL------VNFCSVDQAPSLHY 215
                   SMLNS         NQ QFTKAMNEDQSL       NFCSVDQAPSLH+
Sbjct: 182 TNNNSSLSSMLNSFELSRKVYENQTQFTKAMNEDQSLFNTEEPCNFCSVDQAPSLHW 237

[Close]

BLAST of Chy4G069560 vs. NCBI nr
Match: XP_004136274.1 (homeobox-leucine zipper protein ATHB-6 [Cucumis sativus] >KGN60232.1 hypothetical protein Csa_001001 [Cucumis sativus])

HSP 1 Score: 405 bits (1041), Expect = 4.42e-142
Identity = 210/215 (97.67%), Postives = 211/215 (98.14%), Query Frame = 0


Query: 1   MKRFSHSDSLDSFFSFFSPKDQQPNSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRFSHSDSLDSF SFFSPKDQQ NSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQQNSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSMERDSNRDGNSYIS 180
           KDY VLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSME+DSNRDGNSYIS
Sbjct: 121 KDYEVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSMEKDSNRDGNSYIS 180

Query: 181 MLNSNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 215
           MLNSNNQ QFTKAMNEDQSLVNFCSVDQAPSLHYW
Sbjct: 181 MLNSNNQFQFTKAMNEDQSLVNFCSVDQAPSLHYW 215

[Close]

BLAST of Chy4G069560 vs. NCBI nr
Match: KAA0038691.1 (homeobox-leucine zipper protein ATHB-6-like [Cucumis melo var. makuwa])

HSP 1 Score: 399 bits (1025), Expect = 1.31e-139
Identity = 211/217 (97.24%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MKRFSHSDSLDSFFSFFSPKDQQPNSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRFSHSDSLDSF SFFSPKDQQPNSK IGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSMERDSNRDGN-SYI 180
           KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNR MKKGSMERDSNRDGN SYI
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDSNRDGNNSYI 180

Query: 181 SML-NSNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 215
           SML N+NNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW
Sbjct: 181 SMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 217

[Close]

BLAST of Chy4G069560 vs. NCBI nr
Match: XP_008466655.1 (PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Cucumis melo] >TYK31302.1 homeobox-leucine zipper protein ATHB-6-like [Cucumis melo var. makuwa])

HSP 1 Score: 394 bits (1013), Expect = 9.13e-138
Identity = 211/218 (96.79%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 1   MKRFSHSDSLDSFFSFFSPKDQQPNSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRFSHSDSLDSF SFFSPKDQQPNSK IGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSMERD-SNRDGN-SY 180
           KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNR MKKGSMERD SNRDGN SY
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDDSNRDGNNSY 180

Query: 181 ISML-NSNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 215
           ISML N+NNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW
Sbjct: 181 ISMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 218

[Close]

BLAST of Chy4G069560 vs. NCBI nr
Match: XP_038896275.1 (homeobox-leucine zipper protein ATHB-6-like isoform X2 [Benincasa hispida])

HSP 1 Score: 340 bits (873), Expect = 3.68e-116
Identity = 190/237 (80.17%), Postives = 200/237 (84.39%), Query Frame = 0


Query: 1   MKRFSHSDSLDSFFSFFSPKDQQPNSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRF HS+SLDSF SFFSP +QQ +SK IG YSKEFQAMLDSLEEEDNSEDG S GGSAP
Sbjct: 1   MKRFGHSESLDSFISFFSPNEQQ-SSKTIGAYSKEFQAMLDSLEEEDNSEDGSSGGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKR LKLDQVK LERHFEVENKLEP+RKM+IAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRLLKLDQVKALERHFEVENKLEPERKMRIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRE---------MKKGSMERDS 180
           KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRE         ++ GSME+DS
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREGTEMKIQREVRNGSMEKDS 180

Query: 181 NRDGNSYISMLNS--------NNQIQFTKAMNEDQSLVN------FCSVDQAPSLHY 214
           NRDGNSYISMLN          NQ QFTKAMNEDQSL+N      FCSVDQAPSLH+
Sbjct: 181 NRDGNSYISMLNCFEFSGKVYENQNQFTKAMNEDQSLINTEEPCNFCSVDQAPSLHW 236

[Close]

BLAST of Chy4G069560 vs. NCBI nr
Match: XP_038896274.1 (homeobox-leucine zipper protein ATHB-6-like isoform X1 [Benincasa hispida])

HSP 1 Score: 334 bits (857), Expect = 1.20e-113
Identity = 190/242 (78.51%), Postives = 200/242 (82.64%), Query Frame = 0


Query: 1   MKRFSHSDSLDSFFSFFSPKDQQPNSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRF HS+SLDSF SFFSP +QQ +SK IG YSKEFQAMLDSLEEEDNSEDG S GGSAP
Sbjct: 1   MKRFGHSESLDSFISFFSPNEQQ-SSKTIGAYSKEFQAMLDSLEEEDNSEDGSSGGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKR LKLDQVK LERHFEVENKLEP+RKM+IAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRLLKLDQVKALERHFEVENKLEPERKMRIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASK-----VKELREKVNRE---------MKKGS 180
           KDYGVLKLNYDALKLDYDVLEKENASLASK     VKELREKVNRE         ++ GS
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKEILWQVKELREKVNREGTEMKIQREVRNGS 180

Query: 181 MERDSNRDGNSYISMLNS--------NNQIQFTKAMNEDQSLVN------FCSVDQAPSL 214
           ME+DSNRDGNSYISMLN          NQ QFTKAMNEDQSL+N      FCSVDQAPSL
Sbjct: 181 MEKDSNRDGNSYISMLNCFEFSGKVYENQNQFTKAMNEDQSLINTEEPCNFCSVDQAPSL 240

[Close]

BLAST of Chy4G069560 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-36
Identity = 86/164 (52.44%), Postives = 116/164 (70.73%), Query Frame = 0


Query: 1   MKRFSHSDSLDSFFSF---FSPKDQQPNSKGIGGYSKEFQAMLDSLEEEDNS--EDGGSS 60
           MKR S SDS+    S     S  +Q P   G     +EFQ+ML+  EEE+ +  E+ G  
Sbjct: 2   MKRLSSSDSVGGLISLCPTTSTDEQSPRRYG----GREFQSMLEGYEEEEEAIVEERGHV 61

Query: 61  GGSAPERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWK 120
           G S  E+KRRL ++QVK LE++FE+ENKLEP+RK+K+A EL L+PRQV +WFQNRRARWK
Sbjct: 62  GLS--EKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 121

Query: 121 TKQLEKDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVN 160
           TKQLEKDYGVLK  YD+L+ ++D L ++N SL  ++ +L+ K+N
Sbjct: 122 TKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLN 159

[Close]

BLAST of Chy4G069560 vs. TAIR 10
Match: AT5G65310.2 (homeobox protein 5 )

HSP 1 Score: 149.1 bits (375), Expect = 4.2e-36
Identity = 84/167 (50.30%), Postives = 120/167 (71.86%), Query Frame = 0


Query: 28  GIGGYSKEFQAMLDSLEEEDNSEDGGSSG---GSAPERKRRLKLDQVKGLERHFEVENKL 87
           G G YS+    M D+LE++ + ED G  G    +A E+KRRL ++QVK LE++FE++NKL
Sbjct: 21  GAGDYSQ----MFDALEDDGSLEDLGGVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKL 80

Query: 88  EPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLNYDALKLDYDVLEKEN 147
           EP+RK+K+A EL L+PRQV IWFQNRRARWKTKQLE+DYGVLK N+DALK + D L+++N
Sbjct: 81  EPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDN 140

Query: 148 ASLASKVKELREKVNREMKKGSMERDSNRDGNSYISMLNSNNQIQFT 192
            SL  ++KEL+ K+N E  KG  E  + +   +  S++ +N  ++ +
Sbjct: 141 DSLLGQIKELKAKLNVEGVKGIEENGALKAVEANQSVMANNEVLELS 183

[Close]

BLAST of Chy4G069560 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 )

HSP 1 Score: 148.3 bits (373), Expect = 7.2e-36
Identity = 92/198 (46.46%), Postives = 131/198 (66.16%), Query Frame = 0


Query: 7   SDSLDSFFSF-FSPKDQQPNSK---------GIGGYSKEFQAMLDSLEEEDNSEDGGSSG 66
           SDSL  F     S  D+Q + +         G G YS+    M D+LE++ + ED G  G
Sbjct: 8   SDSLSGFLPIRHSTTDKQISPRPTTTGFLYSGAGDYSQ----MFDALEDDGSLEDLGGVG 67

Query: 67  ---GSAPERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRAR 126
               +A E+KRRL ++QVK LE++FE++NKLEP+RK+K+A EL L+PRQV IWFQNRRAR
Sbjct: 68  HASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRAR 127

Query: 127 WKTKQLEKDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSMERDSNR 186
           WKTKQLE+DYGVLK N+DALK + D L+++N SL  ++KEL+ K+N E  KG  E  + +
Sbjct: 128 WKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVEGVKGIEENGALK 187

Query: 187 DGNSYISMLNSNNQIQFT 192
              +  S++ +N  ++ +
Sbjct: 188 AVEANQSVMANNEVLELS 201

[Close]

BLAST of Chy4G069560 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 )

HSP 1 Score: 146.7 bits (369), Expect = 2.1e-35
Identity = 83/164 (50.61%), Postives = 110/164 (67.07%), Query Frame = 0


Query: 1   MKRFSHSDSLDSFFSFFSPKDQQPNSKGIGGYSKEFQAMLDSLEEED---NSEDGGSSGG 60
           MKR S SDS+    S  S  +Q P      GY   +Q+ML+  +E+        G     
Sbjct: 1   MKRLSSSDSMCGLIS-TSTDEQSPR-----GYGSNYQSMLEGYDEDATLIEEYSGNHHHM 60

Query: 61  SAPERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTK 120
              E+KRRLK+DQVK LE++FE+ENKLEP+RK K+A EL L+PRQV +WFQNRRARWKTK
Sbjct: 61  GLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTK 120

Query: 121 QLEKDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRE 162
           QLEKDYGVLK  YD+L+ ++D L ++N SL  ++ +++ KVN E
Sbjct: 121 QLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGE 158

[Close]

BLAST of Chy4G069560 vs. TAIR 10
Match: AT1G69780.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 121.7 bits (304), Expect = 7.2e-28
Identity = 69/136 (50.74%), Postives = 92/136 (67.65%), Query Frame = 0


Query: 45  EEDNSEDGGSSGGSAPERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVT 104
           EED S+DG   G    E+KRRL ++QVK LE++FE+ NKLEP+RKM++A  L L+PRQ+ 
Sbjct: 72  EEDYSDDGSQMG----EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIA 131

Query: 105 IWFQNRRARWKTKQLEKDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRE--- 164
           IWFQNRRARWKTKQLEKDY  LK  +D LK + D+L+  N  L +++  L+ +   E   
Sbjct: 132 IWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNREQTESIN 191

Query: 165 MKKGSMERDSNRDGNS 178
           + K +    SNR  NS
Sbjct: 192 LNKETEGSCSNRSDNS 203

The following BLAST results are available for this feature:

BLAST of Chy4G069560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46668	1.6e-35	52.44	Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6...	[more]
P46667	1.0e-34	46.46	Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5...	[more]
Q940J1	2.9e-34	50.61	Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9XH37	5.7e-30	46.98	Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=H...	[more]
Q6K498	5.7e-30	46.98	Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of Chy4G069560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHK6	1.5e-110	97.67	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889880 PE...	[more]
A0A5A7TAR1	1.1e-108	97.24	Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3E5X1	2.7e-107	96.79	Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CRT3	2.7e-107	96.79	homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo OX=3656 GN=LOC103504...	[more]
A0A6J1FIN2	1.7e-80	73.42	homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Chy4G069560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136274.1	4.42e-142	97.67	homeobox-leucine zipper protein ATHB-6 [Cucumis sativus] >KGN60232.1 hypothetica...	[more]
KAA0038691.1	1.31e-139	97.24	homeobox-leucine zipper protein ATHB-6-like [Cucumis melo var. makuwa]	[more]
XP_008466655.1	9.13e-138	96.79	PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Cucumis melo] >TYK31302....	[more]
XP_038896275.1	3.68e-116	80.17	homeobox-leucine zipper protein ATHB-6-like isoform X2 [Benincasa hispida]	[more]
XP_038896274.1	1.20e-113	78.51	homeobox-leucine zipper protein ATHB-6-like isoform X1 [Benincasa hispida]	[more]

BLAST of Chy4G069560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22430.1	1.1e-36	52.44	homeobox protein 6	[more]
AT5G65310.2	4.2e-36	50.30	homeobox protein 5	[more]
AT5G65310.1	7.2e-36	46.46	homeobox protein 5	[more]
AT4G40060.1	2.1e-35	50.61	homeobox protein 16	[more]
AT1G69780.1	7.2e-28	50.74	Homeobox-leucine zipper protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 130..164
None	No IPR available	GENE3D	1.10.10.60		coord: 32..118 e-value: 1.2E-17 score: 65.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..66
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 5..203
None	No IPR available	PANTHER	PTHR24326:SF535	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6	coord: 5..203
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 60..121 e-value: 4.3E-16 score: 69.5
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 63..115 e-value: 3.3E-15 score: 55.7
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 57..117 score: 16.147139
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 62..118 e-value: 6.24095E-13 score: 59.5645
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 117..158 e-value: 9.5E-16 score: 57.7
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 92..115
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 49..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G069560.1	Chy4G069560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding