Chy4G069280 (gene) Cucumber (hystrix) v1

Overview
NameChy4G069280
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH04: 1921151 .. 1921687 (+)
RNA-Seq ExpressionChy4G069280
SyntenyChy4G069280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTATCGATCCTCATGTTTTCGATATCATCAAGAGCATGCTTGGAGAAACTTAGATTGCGATTTCGAGATTCTTTTTAATCTATTTATGTTTGGGTTTGACATACAGATGTTCTGGTTGTTAGGTACGTTATTATCGCCGAAAGGGTATCTTCTTGAACTACTCTATGCTCGAGATCTTATTCTCGGAAACTTATTTGTCTTAACATTCTATTCATTCTCCTTTATTAATATCGCTATCCTGAAGCCGTGAGGAACAGTCATTTTGAGCCAAGTTGTTTGATTTGTCTCTGATCTGTTGATATCAACTGCTAGTTATACTGTTGGATTCTTTGTTTTTATTTGGCAGATGATGAAGTGAAGGAAAATATGGCCTTTGCTTTTGTAGGTTGGTTTGCTTTCACAACCCACCACTTTTGTGGAAGAAATGTCCCTCTTTGCCTCCAAGACCTTTTTTTATGGCATTTCTTGTTAGCCACTGAACAACTTGGAGAAAAAAAAAGGCATATGGACTTCAATGAAGCATTGGATTTAG

mRNA sequence

ATGAATTATCGATCCTCATGTTTTCGATATCATCAAGAGCATGCTTGGAGAAACTTAGATTGCGATTTCGAGATTCTTTTTAATCTATTTATGTTTGGGTTTGACATACAGATGTTCTGGTTGTTAGATGATGAAGTGAAGGAAAATATGGCCTTTGCTTTTGTAGCCACTGAACAACTTGGAGAAAAAAAAAGGCATATGGACTTCAATGAAGCATTGGATTTAG

Coding sequence (CDS)

ATGAATTATCGATCCTCATGTTTTCGATATCATCAAGAGCATGCTTGGAGAAACTTAGATTGCGATTTCGAGATTCTTTTTAATCTATTTATGTTTGGGTTTGACATACAGATGTTCTGGTTGTTAGATGATGAAGTGAAGGAAAATATGGCCTTTGCTTTTGTAGCCACTGAACAACTTGGAGAAAAAAAAAGGCATATGGACTTCAATGAAGCATTGGATTTAG

Protein sequence

MNYRSSCFRYHQEHAWRNLDCDFEILFNLFMFGFDIQMFWLLDDEVKENMAFAFVATEQLGEKKRHMDFNEALDLX
Homology
[Close]
BLAST of Chy4G069280 vs. ExPASy TrEMBL
Match: A0A0A0LHM4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G891620 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23
Identity = 55/64 (85.94%), Postives = 60/64 (93.75%), Query Frame = 0 

Query: 1  MNYRSSCFRYHQEHAWRNLDCDFEILFNLFMFGFDIQMFWLLDDEVKENMAFAFVATEQL 60
          M++R SCFRY QEHA RN DCDF+ILF+LFMFGFDIQMFWLLDDEVKENMAFAFVATEQL
Sbjct: 1  MDHRPSCFRYRQEHAGRNSDCDFKILFDLFMFGFDIQMFWLLDDEVKENMAFAFVATEQL 60

Query: 61 GEKK 65
          G+KK
Sbjct: 61 GDKK 64

[Close]
BLAST of Chy4G069280 vs. NCBI nr
Match: KGN60257.1 (hypothetical protein Csa_002509 [Cucumis sativus])

HSP 1 Score: 117 bits (294), Expect = 1.09e-32
Identity = 55/64 (85.94%), Postives = 60/64 (93.75%), Query Frame = 0 

Query: 1  MNYRSSCFRYHQEHAWRNLDCDFEILFNLFMFGFDIQMFWLLDDEVKENMAFAFVATEQL 60
          M++R SCFRY QEHA RN DCDF+ILF+LFMFGFDIQMFWLLDDEVKENMAFAFVATEQL
Sbjct: 1  MDHRPSCFRYRQEHAGRNSDCDFKILFDLFMFGFDIQMFWLLDDEVKENMAFAFVATEQL 60

Query: 61 GEKK 64
          G+KK
Sbjct: 61 GDKK 64

The following BLAST results are available for this feature:
BLAST of Chy4G069280 vs.
Match NameE-valueIdentityDescription
BLAST of Chy4G069280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHM41.1e-2385.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G891620 PE=4 SV=1[more]
BLAST of Chy4G069280 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60257.11.09e-3285.94hypothetical protein Csa_002509 [Cucumis sativus][more]
BLAST of Chy4G069280 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G069280.1Chy4G069280.1mRNA