Chy4G068780 (gene) Cucumber (hystrix) v1

Overview
NameChy4G068780
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH04: 1419497 .. 1421764 (-)
RNA-Seq ExpressionChy4G068780
SyntenyChy4G068780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAGTACAAGGGTTTCCTGATGTTAGCTCAATCATTTACACAGGGAAGAGAAGATTCATCCTTTTCACTCATGCAGGTATTATAAAATTTCAAATTCATACTATCATTTCTAGTTTAATATAATTCTTGTCACTACAAATAAAAAAAAAGAAATTAAAGATATCTTCTAGGGTATATAATCACGAGGAGATATATGAAAACATGAAAACGTATGTTAAGAGTTAAACTCGGACGCTTGCAACAGTATAGTTGGGGCCGGAAAACTCGTCGAGAGACAATGATTTTTAATTCATTATTTTTACTTCTCTAAGAACTCGTTAACTCATATACTGTCATTAGTACTGGTAATAAGGTTGTTATAATCACATCCTCTAGTTTTCTAGTTTTTAGAAGATTATTGTTGCTATCAAAACTCAAATTCTTGAGATGAATTATTTTATGTTTTTATAAATATCAAGATATATGACCTTCAAATTTAATAATTCTTTTTAAAAAAGTTAAGTTAATTAAATAATTAGTGTATTAATTCTAGGGTTGGGCTGTAATAATACTGTAAGGACAAATCCTGATCATCCCATTTCTGCCATTTAGTTTCTTGTTGAAAAAAAAGTATAACATTTCTACCAACATCACCATATTACAAACATATCCATAGCCTAAAAAGGTTAGAGACTTGCATTTTACTTATTTAAGGGTGGAAAGTTATAAGATAGAGTGAATACAATTTTATGGAGTTAAACAACTGTTGAGAGATGAGATCGATCGAGATTATATCAACTACCACTTAGTTAAGCTCTCAATTTGATGATGAATCAATTAACTAATTATACAATAATTAACCAAAGTAAAAAACATTTGGTATAAATTTAAAAAATGTCATGTATTCCATATGATATTTGGCAGAGAGGGTCAGGAAAGAGTTAGGGCTAGCTAGAGGTGCAGTCTGATCAGTTATTGATTGTTAAATTCAGAAGGCCTATTGATTTGGTTAGAAGGGGTACTGCCTTAAGTTCCATGTCAGGACTAAGGACATCTCTATTTATCTTTTTCTTTATATTAAAGTAATATGTGATATTTATTCACATTGTTAAGAAAATTTTGGACTAAAAATTGTATCGATTTATACTCCATTTATACATTTCACTATGTTTTGTTTAAAAAAGACTTATAATTATATCGATGAGTTGATGTATAATGATAATTTTCATATTTTTGTGATAAAGAGTCGAAGTTTAAATTGATTCATTTATAAAATTTAGGAGCTTATAAACTAACGTTGGATCAATTTTAATAAAAAAAGAAGCCTTCATCTCTAGCTAGCTTTGCTTCTTGTATTCATCCTGTGTGTACTTAATCTTTTTTATCTATGTGGTGATGAATGTATTCGACTTGGGGTTGGATGAGAGTAATTTGGATGTGTTATTTAGGTTTAGATGTCTAAGTGCGCCTTCTTAATTCCTCTTTGCTCACCGTAGAATTGATAAAAATTACTATAAGTTTCATTCAATACGTATTCGTAAATTTTTGATAACCTACTTCCTTGTTATATATCTGTTTATACTTCTCATGAATATTGTGTACTACTTGTTCTTTTATCCTAAAACGAATCTAAATTTTAAAAAAATTGCAAATCACAAAGCTCCACGTGATCATAAAAATCCAATAGTTTCTTAAAAAAAAAAAGAAAAAAAACAACTAATATATAGATGTATGTTGGTTTAATTAAACAGAAGACTAAGGAACAAAGGGTCGTGACGATTCGAAAAGCAGTATCATCAGATTTAAGCAAGGAGATTGAAAATTACAAAGTAAGAATCAAGAACAACAACAGTTATGAAGTAGAAGAAATGAAGAACAGATCATCATTAGTAGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTGGTAGAAGCAAAATGCAGTTGCTGTGGAATAAAAGAAGAGTGCACAAAATCCTACATTTTAGAGGTCCAGAAATCCTTCTCAGGGAATAAATGGGTTTGTGGGCTTTGCTCTGAAGCTGTTAAAGAAAGAGTATTGAAATTTCCAAACATAACCATTGACAAAGCTTTGGAGCTTCATAGACAGTTTTGTGATAGTTTTAATACTACCACAAGGTTAAACCCTAAACTTTCTTTAACCACTTCCATGAGAAAGATTGCTAGAAAAAGTTTTGAGAATCGTACCAATAATAATGATTATCATAATCATAATAAGCTTTCTCGAAGTGTTAGCTGTGATCCAAGAATTGGTCTCCAAGATTGA

mRNA sequence

CAAAGTACAAGGGTTTCCTGATGTTAGCTCAATCATTTACACAGGGAAGAGAAGATTCATCCTTTTCACTCATGCAGAAGACTAAGGAACAAAGGGTCGTGACGATTCGAAAAGCAGTATCATCAGATTTAAGCAAGGAGATTGAAAATTACAAAGTAAGAATCAAGAACAACAACAGTTATGAAGTAGAAGAAATGAAGAACAGATCATCATTAGTAGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTGGTAGAAGCAAAATGCAGTTGCTGTGGAATAAAAGAAGAGTGCACAAAATCCTACATTTTAGAGGTCCAGAAATCCTTCTCAGGGAATAAATGGGTTTGTGGGCTTTGCTCTGAAGCTGTTAAAGAAAGAGTATTGAAATTTCCAAACATAACCATTGACAAAGCTTTGGAGCTTCATAGACAGTTTTGTGATAGTTTTAATACTACCACAAGGTTAAACCCTAAACTTTCTTTAACCACTTCCATGAGAAAGATTGCTAGAAAAAGTTTTGAGAATCGTACCAATAATAATGATTATCATAATCATAATAAGCTTTCTCGAAGTGTTAGCTGTGATCCAAGAATTGGTCTCCAAGATTGA

Coding sequence (CDS)

CAAAGTACAAGGGTTTCCTGATGTTAGCTCAATCATTTACACAGGGAAGAGAAGATTCATCCTTTTCACTCATGCAGAAGACTAAGGAACAAAGGGTCGTGACGATTCGAAAAGCAGTATCATCAGATTTAAGCAAGGAGATTGAAAATTACAAAGTAAGAATCAAGAACAACAACAGTTATGAAGTAGAAGAAATGAAGAACAGATCATCATTAGTAGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTGGTAGAAGCAAAATGCAGTTGCTGTGGAATAAAAGAAGAGTGCACAAAATCCTACATTTTAGAGGTCCAGAAATCCTTCTCAGGGAATAAATGGGTTTGTGGGCTTTGCTCTGAAGCTGTTAAAGAAAGAGTATTGAAATTTCCAAACATAACCATTGACAAAGCTTTGGAGCTTCATAGACAGTTTTGTGATAGTTTTAATACTACCACAAGGTTAAACCCTAAACTTTCTTTAACCACTTCCATGAGAAAGATTGCTAGAAAAAGTTTTGAGAATCGTACCAATAATAATGATTATCATAATCATAATAAGCTTTCTCGAAGTGTTAGCTGTGATCCAAGAATTGGTCTCCAAGATTGA

Protein sequence

QSTRVS*C*LNHLHREEKIHPFHSCRRLRNKGS*RFEKQYHQI*ARRLKITK*ESRTTTVMK*KK*RTDHH**LKKKKKKKKKNW*KQNAVAVE*KKSAQNPTF*RSRNPSQGINGFVGFALKLLKKEY*NFQT*PLTKLWSFIDSFVIVLILPQG*TLNFL*PLP*ERLLEKVLRIVPIIMIIIIIISFLEVLAVIQELVSKIX
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..76

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G068780.1Chy4G068780.1mRNA