Chy4G068680 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G068680
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	CCR4-NOT transcription complex subunit 1
Location	chrH04: 1337126 .. 1342796 (+)
RNA-Seq Expression	Chy4G068680
Synteny	Chy4G068680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGGAAAGAGGGTAAGGCCAGACTTGCCCTACCGGTTTGTTGTGGGATTGCTACTTTGCTTATTCCTCTGGAGTCTGTGCTTAAGTTCTTTGCTTTGACCCAATTCGAAGTAGAGGCTATGGTTCTACGATTGTGGAGGTGCTCTTGAATTGAAGTGTAGAATTATGTGTTCTTTATCAGAAAGGTCATTGTTCTCGCCCAAGTTGCTCCTTTGCTCACGGAAACGCTGAACTTAGGCGATTTGCTGCTGCTTGATCTATCGGTAATTTGCCTCTTATAACTCCACTTTCGTCTCGTGTTCTCTAATTTTGGGCTTTAGGGTTGATGGAATGTATATTTACTAATCCTTGTCGTTTCTGTCTCTATTCCCTATCTCTTATTGGAATTGGTTTTGGTTACGCGTCGTTGATTATTCTTACATTCAACGCGAACAGTGGTATGGTGATGGTTTTATGTGTCTGCGTTTAATTTTTTTTTCTTGGTATTGGTGTGATTCAAGAGATCTGAGTTTATTTTCTTGGGAGAGGTATAGACTAATTTTGAACTGACGGTGTTTTTTTCTTCCATCATGGTCTTCTTGTTATAATCAATGTTGAGGACTTAATTTATATTATTTTTTTTTTCCTATTAATCTCTGGTCGTCGTACTCTTTCTTCTTTCTGTCTGTTCTTGATTCTTCCTTATGGTGCATTGTGAGGGAGGGGCCGGGTATCTTTAAAATGTAATGGTAAGATAAGCCTTGTAAGAACTTCATTGATTCATCAATTGCTTTTTAGAAAGAATATGTTGCAGCAACTAAACTTGTTAAAATGAAATTTCCCCATCTTTGCAGGTAGAGTGGAATATAGAGGAAATGATTTAAGGCAACTAAACTTGTTAAAATGAAATTTCCATAGTTGAAGGTTGGCTGGAACAAATTGTGTGGTGAGGATGAATCAGACTGTAAGTTCCTACTTATATTATTGATGCTCTAAAACACCTTAGGAAATGTAGATAGGATATACAAAAAGGGGAGAATCTCAGTTCTAAAAGAAGTTATATTAAAACTTTCCAATTACATAAAAGTTTGTCGGACTATAATTTGTGAAATGCCAAAAGAAGCCGAACAGATTCTCCATTTCTTCCTTGAAAGGATGGCCCAAGAATTGGTAGGAAAACATCCATATTGAGCTTCTCCTTTTTTTATTCCACAATCTGAGTTTTCAAACAAATAACTGCCCTTTTTTCTGGCCTTGTTGGTTACTGTTTTACATAACATTTAACCAATTGAACTTTCCAACCTTCCATTCTCCCATGGCAGATATCCTGCCTTGAAAATATTTTAAATGCCTTTGAAATAATTTTATAATATTGGTTTATGATGGAATAGTAGAAATGACAATGTGGTGTATTAATAATCACATACATTTGGTTTGTGTTGAAATTTATGAAAAGATGAAGTTGGGTTTGGCTAGGCAGAATTTTGAAGATTAGTTCCGTTGGAGAGATAGCTTTCTTTAAATGCTATACTAGCATACTTTTTCAGTTTTTTTCTTTTATTATCATACAACTCCATTATTTATTTTCTTGTCCCCAGCCCTAAGATCGGGATCCTTAGCAGATTTAACTCTGCTTCTGTTTACTTAAATATGAAACTGTCATCCATGCTATTCCAAGACCCTTTTGCTATGCTATTTGTCAAGTTTAACTCGGCGCTTGTAGCTTTGAAGTTCTTTGAAGTAGAACTTTGATCTTGCATTGCCTATTTCTAACACTCGAGTTCTTACAGTATAACTGATTTTGCAGCTGCTTTGACTTCTGATGACAAAGTGGAAGCTACTTCCATTTATTTCCCATTTGCTCTAGTTAGCCAAAAATTTAAGTCGGCTTACACAAGCAACATAAATAATTTTCTACGGTAGATGGGCCAAGATCATGATGGAAGCGGCAAATTTAAGCGGTAGAAAAGATTTAAGCAGATGAAGTAATGCTATGTAAGTCCTCTTTAATCATATGTTGTTTCTTATAAATCCTACCATGTTAACCATCATGGGTTGACCTAGTCGTAGAAAAAGAGTCGTGAGTTCAATCTCTGGTGGCTATATACCTAGGAATTAATTTTACAATTTTTAGAATACGTTTGTGAAAAAAATGCTTTTCAAAACAAATTACTTTTGTTACAAGCATGTTTGGAAAAATTAATAATTTTAATTGTTATCTAAATTTGACTTTAAATTGATCAAAGAAAATATTTAAAATATGTAACGAGAATAAAAAGGTTGTAATTATTAGATTAACTTTTGAATGTGAATGTTGACCGCTGATACACATTTGTTATTTTATTCACTTTTTAAAAAATGTAAGATGTAATTTTTTTATTAAAAATATTTTAAAAAAATGTTCTTAAACTAGAAGGAACCAAACATACCCTTTAAAACTTGAGTGGTATAAGTTCTTGCTAGGTTCTTTCATTGTTTTTTGGTTTTCTTGATTCCTTATTCAACATGTGAATGATGGATAAATCATTTGGCAGAATATGAAATATAAAAATCTCAAGCTAATTTAAGTCAACCTCTTATTCAGAAACTAGAGCTTATTCAGCGGAATAATAAACTACTGCCGTGCTCGGTGTAGACTCCGCCTTGTGCGAGTTTTCCTGTGATAATGGGGAGGGGTTTGAAAGAGGTCGTCAAATAAGAGTTCTTCTGAAAGTTGGGAAGTCAATCAAGGCATTAGGCCTAAAGAAGCTGCTTAGGGTGGGATGAATTCCCCTAGTTTGAACAATTACATAGAAGTACAATTATGCAGAAAATTAGACAAAGCGCTCCATGTCCATGAACAATCATGGTGCGTGGTCAGCTCTCTTTCAAATCAGTGCCTTCTCCTAAAACAAATCCTTTGCTCTCAAATCAGTGCCGTCTCCTAAAACAAATTCTTTGCGTTGATTTCTTTCAAACTATACCCTACATAGATGCTTTGATTGCATTAATCCTTGTTTAAATGATTTTGTTTATAGTTTCCTATTTTTCAAAAGTATACAGTTTGAAATGTCATGTCATCTACAACTTTATTGTTTACAGGTGATTTACTCGGAGGAAGAATAGAAGTACAAGGACATCACTCTTGGTCTTGTTTGCAGTGAATTATTAAATCTTGCTGAGTATAATGTTCATATGGCGAAACTAATTGATGGAAGCAGGAATAGTAAGTGAACGTATTGATTTCATTAATATTTCCTTTTTTTTTGTCAGTGTGAACTGACCATTTAAGCAATTTGTCAGAGGCTGTGACAAAACTTCACAATCTTGGTTGTGGATGAATCGCGTGTAATTTCAGAACTTCACAATCTTGTTTATGCATTAGCTAAGGTTTGTGTTGTATGAGAGTTACTGGAGGACTCTTCCTCGGTACTTTTCTAAAGCCTTTTTGTCGTTTAATTGCTAGGTTGCTGCAAAATCTGGATCGTCTGAGCCTTTGAATATCTAGTTGAGATAATCAGGAATCCTACTTGTAATATAGCGGCTATGTCTGGGGTTAATGTTGGGAAAGAGGATAAGGCTAGACTTGCCAGAGACAAGAAGGTTTCTTAAGAAGATTGCTATAATTACGATAACAATGAGATGTGTGTCTGTGTTTTCTTGATTTCTCAGTTTTTTGCCTTTTTTCCTGTAACAGGCTTCTGTACCTTCCATAACAAATAGAGAAGATTCTAGTATTCTTGAATATGAAGGACGCGAGTGAAGGCATCATCTAATGATGGAATCTTAGAGTCAGAGAGAATATGTGTCTTTGCCATTCCAAATTCAGGTAAAAGTCCATTAAAAAAAATCATGACAGCCATCTTATCTCGATGAGCTTGTTGAACTTTAACATCAGGACTAAAAGGTAACAACAAGCCAAGCTCGGCAGTGATCTTCTTAAGCCGCATAAAGTAGCTGGTGACAGACTCAACTTTTTGTTCCGCACGAAAAAATTGCATACAAACTTCAAACATTCTATGCACTTGCTCTTTACCTGAATATAGAAATTCTAAAAATTCCAGAAGTTCTTTAACTGACTCACAGTGATCAACCAAACCAATTATCTCACTCTCAATTGAGTTTTTGATCTGAAGATATAAACGGGCATCATCACGAAGCCAATCCTTCTTCTGCTTTGCATCTTCTGGGGGATCTTCGGTCATATGATCATCCATATCAATACTTCTCAAATAAAATAAAATTGTCCGACACCAATCGTAATAATTAGATCCATTTAACTTATGTTTTGTGATCTTAGAGGTTAAGGGAATAACGTTGGAGACTACCAAATTTTTTTATGTCGGCCATATTGAAGTCACACTGATTGTAGTCCACACAAACAAAGAGAAGATCAATCCAAACAGCTGCAAAATTGGAAAAAGACCCAAAACTAATAGCGTAACCTTCAGTTTTCGTTGAACCCGAATGCTATTTGATAGACCCAATGGTACAAACTGACCGGAAACAATGGTTCGAGACAAGCCCAGAAGACGGAGGACAAATCAGACATCTCACGTGCTCTCACGCGTCGGCGCGTGGGTGAAGACCAAGGAGATTCCGGCACGCACGGTGTTTTTCGACGATCGGCGAAGACAGACTTGGGCGGACGGAGGTGGGGCTTCTTATGGTGTGGGTGGTGTCGACAAACGGTCAGCGGAAGGTAACCTAAACTTAAACCTAATGGCCATTTGAAACCCTAATGGCTCTAATACCATGTAATCTAGAATTTAGATAAGTATATTTCTTATTATGTTGAGTCAAAAGAATGTTACATATTTATATAGAGAATAAACTAAACCCTAGAGACTATATACAATTACAATAAAGGACATATGATATAAATATATATATATCATAACCACAAGAACTGTTTGAGACTGTAGACATTAGTTTTTGGAGTGTGAATGTCAGAGTTACTATGTAGGATCTAAACGTCATTAGAGTTAGTTCTCTTAAGAAAGGTGTAATATCGAATTTATATTATTAAATATATAAATTCAGAAATATTTCTGTTTCAAATTTCCTTATTATTACGTGACATTGAACCATTTAAAAAAATTAAGTTTTTGGTGTTTGCTGAATCGTTTGATAAAAAGCATCCTATTATTAGAAGTAAATTATTAATTTTTGAACCTCCCGATATATTGTCTCAAAAGGAAAGGGAAATGAACCTCCCGATATGTTGGCGTAAGACCCTTGCATTGTTACATAGTTCATTATATTTTTTACAACGTCTTTCTTAGGAGAGTACGTAACCTTAACAAATGTCTTACGCCAACATCACTGAAATGTTAGGTGATATATGTTTAAAAAAATTGATTTTTTGTAACTACTATTCCGTTGCCATGACATTGTCTTAGCTTAAGTCGTATCCATGCCACATCTTCTCTGTTTTGGATCCACATTTGGGCTTTTACCCTCCCAAGTAAATGCAGAAAAGCTACTGTTCTTTTTGTAAATATGTAAATGCACAATAGAACTTAGAACGTCCTCAATTGTTTCGTTCTTCCAACAATAACCAACTGATGGATTTCAAGATTTCAATTTACTTCTTGCAGGTATGTCAATTCTATTTGCTGAATGGTACCGAATACGTGAGCTTCCTCGTGCTAATGAAGCTGCCTTGAACCATTTCATATTACAATTACATCAGAATCTTTCCTTGTAA

mRNA sequence

ATGCTGGGAAAGAGGGTAAGGCCAGACTTGCCCTACCGAAAGGTCATTGTTCTCGCCCAAGTTGCTCCTTTGCTCACGGAAACGCTGAACTTAGGCGATTTGCTGCTGCTTGATCTATCGTTGAAGGTTGGCTGGAACAAATTGTGTGGTGAGGATGAATCAGACTCTGCTTTGACTTCTGATGACAAAGTGGAAGCTACTTCCATTTATTTCCCATTTGCTCTAGTTAGCCAAAAATTTAAGTCGGCTTACACAAGCAACATAAATAATTTTCTACGTGAATTATTAAATCTTGCTGAGTATAATGTTCATATGGCGAAACTAATTGATGGAAGCAGGAATATTGAGATAATCAGGAATCCTACTTGTAATATAGCGGCTATGTCTGGGGTTAATGTTGGGAAAGAGGATAAGGCTAGACTTGCCAGAGACAAGAAGGCTTCTGTACCTTCCATAACAAATAGAGAAGATTCTAGTATGTCAATTCTATTTGCTGAATGGTACCGAATACGTGAGCTTCCTCGTGCTAATGAAGCTGCCTTGAACCATTTCATATTACAATTACATCAGAATCTTTCCTTGTAA

Coding sequence (CDS)

ATGCTGGGAAAGAGGGTAAGGCCAGACTTGCCCTACCGAAAGGTCATTGTTCTCGCCCAAGTTGCTCCTTTGCTCACGGAAACGCTGAACTTAGGCGATTTGCTGCTGCTTGATCTATCGTTGAAGGTTGGCTGGAACAAATTGTGTGGTGAGGATGAATCAGACTCTGCTTTGACTTCTGATGACAAAGTGGAAGCTACTTCCATTTATTTCCCATTTGCTCTAGTTAGCCAAAAATTTAAGTCGGCTTACACAAGCAACATAAATAATTTTCTACGTGAATTATTAAATCTTGCTGAGTATAATGTTCATATGGCGAAACTAATTGATGGAAGCAGGAATATTGAGATAATCAGGAATCCTACTTGTAATATAGCGGCTATGTCTGGGGTTAATGTTGGGAAAGAGGATAAGGCTAGACTTGCCAGAGACAAGAAGGCTTCTGTACCTTCCATAACAAATAGAGAAGATTCTAGTATGTCAATTCTATTTGCTGAATGGTACCGAATACGTGAGCTTCCTCGTGCTAATGAAGCTGCCTTGAACCATTTCATATTACAATTACATCAGAATCTTTCCTTGTAA

Protein sequence

MLGKRVRPDLPYRKVIVLAQVAPLLTETLNLGDLLLLDLSLKVGWNKLCGEDESDSALTSDDKVEATSIYFPFALVSQKFKSAYTSNINNFLRELLNLAEYNVHMAKLIDGSRNIEIIRNPTCNIAAMSGVNVGKEDKARLARDKKASVPSITNREDSSMSILFAEWYRIRELPRANEAALNHFILQLHQNLSL*

Homology

[Close]

BLAST of Chy4G068680 vs. ExPASy TrEMBL
Match: A0A0A0L3M1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117930 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.6e-29
Identity = 84/159 (52.83%), Postives = 91/159 (57.23%), Query Frame = 0


Query: 94   ELLNLAEYNVHMAKLIDGSRN--------------------------------------- 153
            ELLNLAEYNVHMAKLIDG RN                                       
Sbjct: 1693 ELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVVDESSVISELHNLVDALAKVAAKP 1752

Query: 154  ---------IEIIRNPTCNIAAMSGVNVGKEDKARLARDKKASVPSITNREDSS------ 192
                     +EII+NP  ++AA+SGVNVGK+DKARLARDKKA VPSITNREDSS      
Sbjct: 1753 GSSEPLQHLVEIIKNPATSVAAISGVNVGKDDKARLARDKKAPVPSITNREDSSILESED 1812

[Close]

BLAST of Chy4G068680 vs. ExPASy TrEMBL
Match: A0A5D3DB11 (CCR4-NOT transcription complex subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00430 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.0e-29
Identity = 85/159 (53.46%), Postives = 90/159 (56.60%), Query Frame = 0


Query: 94   ELLNLAEYNVHMAKLIDGSRN--------------------------------------- 153
            ELLNLAEYNVHMAKLIDG RN                                       
Sbjct: 1635 ELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVVDESSVISELHNLVDALTKVAAKP 1694

Query: 154  ---------IEIIRNPTCNIAAMSGVNVGKEDKARLARDKKASVPSITNREDSS------ 192
                     +EII+NP  +IAA+SGVNVGKEDKARLARDKKA VPSI NREDSS      
Sbjct: 1695 GSSEPLQHLVEIIKNPASSIAAISGVNVGKEDKARLARDKKAPVPSIANREDSSILESED 1754

[Close]

BLAST of Chy4G068680 vs. ExPASy TrEMBL
Match: A0A5A7U0A1 (CCR4-NOT transcription complex subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G00430 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.0e-29
Identity = 85/159 (53.46%), Postives = 90/159 (56.60%), Query Frame = 0


Query: 94   ELLNLAEYNVHMAKLIDGSRN--------------------------------------- 153
            ELLNLAEYNVHMAKLIDG RN                                       
Sbjct: 1729 ELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVVDESSVISELHNLVDALTKVAAKP 1788

Query: 154  ---------IEIIRNPTCNIAAMSGVNVGKEDKARLARDKKASVPSITNREDSS------ 192
                     +EII+NP  +IAA+SGVNVGKEDKARLARDKKA VPSI NREDSS      
Sbjct: 1789 GSSEPLQHLVEIIKNPASSIAAISGVNVGKEDKARLARDKKAPVPSIANREDSSILESED 1848

[Close]

BLAST of Chy4G068680 vs. ExPASy TrEMBL
Match: A0A1S3AUU2 (CCR4-NOT transcription complex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103483121 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.0e-29
Identity = 85/159 (53.46%), Postives = 90/159 (56.60%), Query Frame = 0


Query: 94   ELLNLAEYNVHMAKLIDGSRN--------------------------------------- 153
            ELLNLAEYNVHMAKLIDG RN                                       
Sbjct: 1725 ELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVVDESSVISELHNLVDALTKVAAKP 1784

Query: 154  ---------IEIIRNPTCNIAAMSGVNVGKEDKARLARDKKASVPSITNREDSS------ 192
                     +EII+NP  +IAA+SGVNVGKEDKARLARDKKA VPSI NREDSS      
Sbjct: 1785 GSSEPLQHLVEIIKNPASSIAAISGVNVGKEDKARLARDKKAPVPSIANREDSSILESED 1844

[Close]

BLAST of Chy4G068680 vs. ExPASy TrEMBL
Match: A0A6J1IQF9 (CCR4-NOT transcription complex subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111479079 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 7.3e-27
Identity = 81/159 (50.94%), Postives = 88/159 (55.35%), Query Frame = 0


Query: 94   ELLNLAEYNVHMAKLIDGSRN--------------------------------------- 153
            ELLNLAEYNVHMAKLIDG RN                                       
Sbjct: 1718 ELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVVEESSVISELHNLVDALAKVAAKP 1777

Query: 154  ---------IEIIRNPTCNIAAMSGVNVGKEDKARLARDKKASVPSITNREDSS------ 192
                     +EII+NP+ + AA+SGVNVGKEDKARLARDKKA   SI NR+DSS      
Sbjct: 1778 GSSEPLQQLVEIIKNPSASTAAISGVNVGKEDKARLARDKKAPGHSIANRDDSSFLESED 1837

[Close]

BLAST of Chy4G068680 vs. NCBI nr
Match: XP_011650636.1 (CCR4-NOT transcription complex subunit 1 [Cucumis sativus] >KAE8650214.1 hypothetical protein Csa_009790 [Cucumis sativus])

HSP 1 Score: 139 bits (349), Expect = 5.40e-34
Identity = 84/159 (52.83%), Postives = 91/159 (57.23%), Query Frame = 0


Query: 94   ELLNLAEYNVHMAKLIDGSRN--------------------------------------- 153
            ELLNLAEYNVHMAKLIDG RN                                       
Sbjct: 1734 ELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVVDESSVISELHNLVDALAKVAAKP 1793

Query: 154  ---------IEIIRNPTCNIAAMSGVNVGKEDKARLARDKKASVPSITNREDSSM----- 191
                     +EII+NP  ++AA+SGVNVGK+DKARLARDKKA VPSITNREDSS+     
Sbjct: 1794 GSSEPLQHLVEIIKNPATSVAAISGVNVGKDDKARLARDKKAPVPSITNREDSSILESED 1853

[Close]

BLAST of Chy4G068680 vs. NCBI nr
Match: TYK20782.1 (CCR4-NOT transcription complex subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 138 bits (348), Expect = 7.34e-34
Identity = 85/159 (53.46%), Postives = 90/159 (56.60%), Query Frame = 0


Query: 94   ELLNLAEYNVHMAKLIDGSRN--------------------------------------- 153
            ELLNLAEYNVHMAKLIDG RN                                       
Sbjct: 1635 ELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVVDESSVISELHNLVDALTKVAAKP 1694

Query: 154  ---------IEIIRNPTCNIAAMSGVNVGKEDKARLARDKKASVPSITNREDSSM----- 191
                     +EII+NP  +IAA+SGVNVGKEDKARLARDKKA VPSI NREDSS+     
Sbjct: 1695 GSSEPLQHLVEIIKNPASSIAAISGVNVGKEDKARLARDKKAPVPSIANREDSSILESED 1754

[Close]

BLAST of Chy4G068680 vs. NCBI nr
Match: XP_008437787.1 (PREDICTED: CCR4-NOT transcription complex subunit 1 [Cucumis melo])

HSP 1 Score: 138 bits (348), Expect = 7.35e-34
Identity = 85/159 (53.46%), Postives = 90/159 (56.60%), Query Frame = 0


Query: 94   ELLNLAEYNVHMAKLIDGSRN--------------------------------------- 153
            ELLNLAEYNVHMAKLIDG RN                                       
Sbjct: 1725 ELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVVDESSVISELHNLVDALTKVAAKP 1784

Query: 154  ---------IEIIRNPTCNIAAMSGVNVGKEDKARLARDKKASVPSITNREDSSM----- 191
                     +EII+NP  +IAA+SGVNVGKEDKARLARDKKA VPSI NREDSS+     
Sbjct: 1785 GSSEPLQHLVEIIKNPASSIAAISGVNVGKEDKARLARDKKAPVPSIANREDSSILESED 1844

[Close]

BLAST of Chy4G068680 vs. NCBI nr
Match: KAA0048830.1 (CCR4-NOT transcription complex subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 138 bits (348), Expect = 7.35e-34
Identity = 85/159 (53.46%), Postives = 90/159 (56.60%), Query Frame = 0


Query: 94   ELLNLAEYNVHMAKLIDGSRN--------------------------------------- 153
            ELLNLAEYNVHMAKLIDG RN                                       
Sbjct: 1729 ELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVVDESSVISELHNLVDALTKVAAKP 1788

Query: 154  ---------IEIIRNPTCNIAAMSGVNVGKEDKARLARDKKASVPSITNREDSSM----- 191
                     +EII+NP  +IAA+SGVNVGKEDKARLARDKKA VPSI NREDSS+     
Sbjct: 1789 GSSEPLQHLVEIIKNPASSIAAISGVNVGKEDKARLARDKKAPVPSIANREDSSILESED 1848

[Close]

BLAST of Chy4G068680 vs. NCBI nr
Match: XP_038898360.1 (CCR4-NOT transcription complex subunit 1 [Benincasa hispida])

HSP 1 Score: 133 bits (334), Expect = 5.56e-32
Identity = 82/159 (51.57%), Postives = 89/159 (55.97%), Query Frame = 0


Query: 94   ELLNLAEYNVHMAKLIDGSRN--------------------------------------- 153
            ELLNLAEYNVHMAKLIDG RN                                       
Sbjct: 1733 ELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVVDESSVISELHNLVDALAKVAAKP 1792

Query: 154  ---------IEIIRNPTCNIAAMSGVNVGKEDKARLARDKKASVPSITNREDSSM----- 191
                     +EII+NP  ++AA+SGVNVGKEDKARLARDKKA V SI NREDSS+     
Sbjct: 1793 GSSEPLQHLVEIIKNPAASMAAISGVNVGKEDKARLARDKKAPVHSIANREDSSILESED 1852

[Close]

BLAST of Chy4G068680 vs. TAIR 10
Match: AT1G02080.1 (transcription regulators )

HSP 1 Score: 56.2 bits (134), Expect = 3.4e-08
Identity = 40/125 (32.00%), Postives = 62/125 (49.60%), Query Frame = 0


Query: 81   KSAYTSNINNFLRELLNLAEYNVHMAKLIDGSRNIEIIRNPTCNIAAMSGVNVGKEDKAR 140
            +S+  S +++ +  L  LA  +     L    + I+IIRNP  N A +S  + G ++  R
Sbjct: 1818 ESSVISELHSLVDALAKLASKSGSSESL---QQLIDIIRNPVTNTAGLSDSSTGNDNNDR 1877

Query: 141  LARDKKASVPSITNREDSS---------------MSILFAEWYRIRELPRANEAALNHFI 191
               +K A   + TN E+S+               +S LF  WY+I ELP ANE A + ++
Sbjct: 1878 QKDEKVAC--NTTNTEESTSLDYVESDPAGFQNRVSTLFKNWYQICELPGANETACSQYV 1937

[Close]

BLAST of Chy4G068680 vs. TAIR 10
Match: AT1G02080.2 (transcription regulators )

HSP 1 Score: 56.2 bits (134), Expect = 3.4e-08
Identity = 40/125 (32.00%), Postives = 62/125 (49.60%), Query Frame = 0


Query: 81   KSAYTSNINNFLRELLNLAEYNVHMAKLIDGSRNIEIIRNPTCNIAAMSGVNVGKEDKAR 140
            +S+  S +++ +  L  LA  +     L    + I+IIRNP  N A +S  + G ++  R
Sbjct: 1764 ESSVISELHSLVDALAKLASKSGSSESL---QQLIDIIRNPVTNTAGLSDSSTGNDNNDR 1823

Query: 141  LARDKKASVPSITNREDSS---------------MSILFAEWYRIRELPRANEAALNHFI 191
               +K A   + TN E+S+               +S LF  WY+I ELP ANE A + ++
Sbjct: 1824 QKDEKVAC--NTTNTEESTSLDYVESDPAGFQNRVSTLFKNWYQICELPGANETACSQYV 1883

The following BLAST results are available for this feature:

BLAST of Chy4G068680 vs.


Match Name	E-value	Identity	Description

BLAST of Chy4G068680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3M1	1.6e-29	52.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117930 PE=4 SV=1	[more]
A0A5D3DB11	2.0e-29	53.46	CCR4-NOT transcription complex subunit 1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7U0A1	2.0e-29	53.46	CCR4-NOT transcription complex subunit 1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3AUU2	2.0e-29	53.46	CCR4-NOT transcription complex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103483121...	[more]
A0A6J1IQF9	7.3e-27	50.94	CCR4-NOT transcription complex subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Chy4G068680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650636.1	5.40e-34	52.83	CCR4-NOT transcription complex subunit 1 [Cucumis sativus] >KAE8650214.1 hypothe...	[more]
TYK20782.1	7.34e-34	53.46	CCR4-NOT transcription complex subunit 1 [Cucumis melo var. makuwa]	[more]
XP_008437787.1	7.35e-34	53.46	PREDICTED: CCR4-NOT transcription complex subunit 1 [Cucumis melo]	[more]
KAA0048830.1	7.35e-34	53.46	CCR4-NOT transcription complex subunit 1 [Cucumis melo var. makuwa]	[more]
XP_038898360.1	5.56e-32	51.57	CCR4-NOT transcription complex subunit 1 [Benincasa hispida]	[more]

BLAST of Chy4G068680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02080.1	3.4e-08	32.00	transcription regulators	[more]
AT1G02080.2	3.4e-08	32.00	transcription regulators	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G068680.1	Chy4G068680.1	mRNA