Chy4G068570 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAGAAAATGGGAAGACCCACAAGGAGACAACTTCAATTCTCCAACTAATAATATCGAGCTCCATCTCGAGACTCCATTGCCATTGGAGTGGCAACGATGTCTAGATATTCAGGTACATGACAGTTTAATTTTAAGTGTCATGAAATCCTAGTAGTTTAATTTTTAAGTGTCATGAAATCCTAGTTCCAGTATTATATAATTCTGTTCTCTTATTGTTTTCTTCTCTTTGTCATCTTTTTTGTTTCATAGTCAGGAGAGATACATTTCTTCAACACAAAGACTCAAAAGAGAACCTCAATGGATCCAAGAAGAAATAAATTAGAGGGTCCTACTACTACTCCTAATAGAAGCTTCCATACAAGTGATCATCAAGCCTTGAGCTTGGACCTTGAGCTCAATCTAAATTGTCAATCAAAGAAGAAGATCATGAGCAGTCATAATGATGATACTGGAGGTGGTTTGATGAAATTACAAGCAAATAATTATGGGATCAGTTGTCCATGGCTAAGATTTGAAAGAGAGCAACAAGAAATGGTTGCAAGAGTTTGCATGCAATGTCATTTATTAGTTATGCTTTTGAAATCCTCACCTACATGCCCAAATTGCAAATTCATACACCCAATAACAGATCATCATCAGTACCTCCAAAATAACCCTCCAACTACTACTACTACTACTACAACAACAACAACAACAACCTTCTTTTTACCTAATTCTCTCCCTACTGAGAATAATAATAATCATCATCATCAAACTGAGTCCTTAAAGAGTTTCTTCCCAAATCCTATTCAAAATAAAGTTTAGTTCATTTATTTTCTTTTCTTTTTATTTATTCATTTAGTATTTTAATTACATATATACTGAATTATCAGGGATATATGTTTAGAGGTAAAACCCCTTTTGTTTTCGGGAATGTGTAATTATATATATGAAAAAAGAATCAATTACATTACATTGATCATCATTGATCATGGTTATTGCAGTTGTGTGAGAGATCATACCCATTAGGCCAAGAGAGTTCTTTTTTTTTTCCAACATTCAAAACGCAAGAGAGATCGAGAGGTGCACTGCTAGCTGCACCCTCACCACATTAGGGTTAAGAGAGTTGAAATACGAACTACGGTAAATTTAGTTACATAGATACTTCAACCTCTAACCTCTTACGTATTTATTAATTTTATTGATGATTAATGTGACCCATCAAAATTTAAAGCAAGGTTTTCACTTCATACGAAAATAGATATATTTCTTTTCTTATAGTCTAATGATGTTAGAGATATGTGTATTAATTTGAAGCTACGTTTGGACCAATCAGGGTTCAAATTCTGGAAGAAAAGTAATAATGTGTAAGAGGAAATGGATATATATTTATGGTGTTTCAATTTATTTTTCAAGAGAGTTAATTAAAATATAGTTGTGTATCTATTCATATATCATAATGACAACTACATTGGAAAATGCTATTAGTCATTTGACCTGTGACCCATTACATTTATATTGTTAGGTTCCTCAAAGTTATTAAACCACACAACTTGGAAGAGTAATAATCAAAGTATGTACTGTGAAACATAGATACTTCAACATGTGCAGAGAATCGGTATTAGATGTGTAGACAAATGTAAAATGTGTTAACTAATTTTTTTTTAAGTTCGGATGCATAACTCTTAAGTTTGATTTAGAAAAGAATCCAAATCATTATCGAATTATTAGTACAACTTTTGAAACTTTTATAGAAAAAGTTTTGGTCTAATATTATAACTTAGGTAAGATATGATATTTTCTTTTGATAAGCTCATTTTAATCTATGTAATATGTTTGTTGAGTTTTGGTTCATATACTTTAAAATGTTCAATTTTAGTTCATATTCTAAATATCATTTTAATCTATGAAATATGTTTGTTGACTTTTAGTTCATATGTTCAATTTTAGTTCATATTTCTATCGTAAATTGTCTTAAATTAAATTCTATTAAAATTGTTTAAATCATAATAATATTTTTTCATGGAAAGAAATACAATATGTGAATATATGTTTACAAAATTTATAATGAAAATGCTTAACTAAAGTTACATTTTAAAAGTATAAGAATTAAGGAACATTGCATGCACCAACTAGAAGTTGGTTAGCGCTCACTCCACATCGTTGAGAGACCCACTACAAATATAATAGTTGTGTGTGCATCTATTTATAACCTACAATTAAGTAACTATATGTATACGCTATCAAAATCCTATATATGTGCAACCTTATTTAATATTTGCTATATTATACTCAATATTTTTATCTCATATATATGTGCAACCTTATTTAATATTTGCTATATTATACTCAATATTTTTATCTCATCTCTCTTTTCTTCTTTACAACTTTGCTATTTTCTATCTCAAACAAAAAAATAGTTTCCACCTAACTTAGACTAAAATAGCTTGTCTCAAAAACTAAATATTATAACTCACAAATTATAATAACTCACTGTCTCAATGCTTCTTAATTTTAGCTGGCCTTATTATTTTCTTTTTTTATTTTTTGGAAAAGTTACATGTTTTAATGAAAATGTGTGCTTAGTCACTCAATCTTAGAAATGTACCTTTCTAAACTCCAAGTCTACAGTAATAAACTCATTTGATCTATTTGATTTTCAAAAAGTATCTTTTTAGTATTCTAATTTTTTAAAATAGATTAAAAGGTCTTGAAAGTATTTTTGTTTGACTATGTTTTAAAATAATAAATGATATTTAAAATTAGAAAAAAATAAATTTAAAGAGAACGCTGATTTTAAAAATTTATTTTTAAAAACTCAAAACTAAAAATGTAAAATTATTAAAAGAAAAAAAATTAGAGAATTTTTAAAAATAATAGATTTTACAAAATATTTACACCTTATATCAAATTCTATCATTCATATGTTATAATGATATAATCCAAAATTTTGCTATAGTTTGTAAATATTTTAATTTATTTTGCTATTTTTTTAAATTCATGATCAAAAGTTATATATTTTTTAAATTTTGTACTAAAAAGTCATCTTTTCTTAATATCGTTCGTATATAAACAACTTAAAATCTTGTGATTTTGCGGGACACAACCACTACAACACAATCAAAATTTAGTAAAAAATAAAATATTATTTAACATATATTGTAATCTATCAATTCTCCTGAGGGGCACGTGCCTTGCCCCGAATATGTTTGTGTATATATCACTGCCCAACTCAAATTTTCAAAGAACTCAGACACTAAAAGTGCAATGCAATAATCTTGTTGTAGTGTTACGACAGATTACCTTCATAATTTCTTTCGATCAGTTGTAGTGTACGTAGCAGAAATCATGGAGGACGTTGAAGCGGAATCCAAAGACGAAGCAATGCGAGGATCCAAAACCGCCATTCGATGTGCAAAAGCAGCTTTTCTACTTTCTTCACTCAAATCCTCCCAAAATCGCCAACTCAGAGCCACTGTCCATGAACAAGCCAAGGTACTCAAAATCACAATTTACGATCGCTATATATAATTAATCTATCCTAACTTGTCTAATATATATCGCTCTGGCTTATTTATTTATTTGATTCGCGATTTTGTTAAATTAAAACGTCGATCGATTACCTTCCAGGAGAGAAAGATGCTGAGGAAAACTGTGGGAGATTTGAAGATCCAGTTGGCTAGGGAGCGTCTGAGGAATAAGAGGATCAAACTCTGCGGTTTGATGGAATTTGTTCTTCAGCTTCTGCTGGTTATCTCTCTTTCGAGTTTATTCCTTTTTGTTGCCTTCGGATTTGTTTGA ATGAAGAGAAAATGGGAAGACCCACAAGGAGACAACTTCAATTCTCCAACTAATAATATCGAGCTCCATCTCGAGACTCCATTGCCATTGGAGTGGCAACGATGTCTAGATATTCAGTCAGGAGAGATACATTTCTTCAACACAAAGACTCAAAAGAGAACCTCAATGGATCCAAGAAGAAATAAATTAGAGGGTCCTACTACTACTCCTAATAGAAGCTTCCATACAAGTGATCATCAAGCCTTGAGCTTGGACCTTGAGCTCAATCTAAATTGTCAATCAAAGAAGAAGATCATGAGCAGTCATAATGATGATACTGGAGGTGGTTTGATGAAATTACAAGCAAATAATTATGGGATCAGTTGTCCATGGCTAAGATTTGAAAGAGAGCAACAAGAAATGGTTGCAAGAGTTTGCATGCAATTTGTAGTGTACGTAGCAGAAATCATGGAGGACGTTGAAGCGGAATCCAAAGACGAAGCAATGCGAGGATCCAAAACCGCCATTCGATGTGCAAAAGCAGCTTTTCTACTTTCTTCACTCAAATCCTCCCAAAATCGCCAACTCAGAGCCACTGTCCATGAACAAGCCAAGGAGAGAAAGATGCTGAGGAAAACTGTGGGAGATTTGAAGATCCAGTTGGCTAGGGAGCGTCTGAGGAATAAGAGGATCAAACTCTGCGGTTTGATGGAATTTGTTCTTCAGCTTCTGCTGGTTATCTCTCTTTCGAGTTTATTCCTTTTTGTTGCCTTCGGATTTGTTTGA ATGAAGAGAAAATGGGAAGACCCACAAGGAGACAACTTCAATTCTCCAACTAATAATATCGAGCTCCATCTCGAGACTCCATTGCCATTGGAGTGGCAACGATGTCTAGATATTCAGTCAGGAGAGATACATTTCTTCAACACAAAGACTCAAAAGAGAACCTCAATGGATCCAAGAAGAAATAAATTAGAGGGTCCTACTACTACTCCTAATAGAAGCTTCCATACAAGTGATCATCAAGCCTTGAGCTTGGACCTTGAGCTCAATCTAAATTGTCAATCAAAGAAGAAGATCATGAGCAGTCATAATGATGATACTGGAGGTGGTTTGATGAAATTACAAGCAAATAATTATGGGATCAGTTGTCCATGGCTAAGATTTGAAAGAGAGCAACAAGAAATGGTTGCAAGAGTTTGCATGCAATTTGTAGTGTACGTAGCAGAAATCATGGAGGACGTTGAAGCGGAATCCAAAGACGAAGCAATGCGAGGATCCAAAACCGCCATTCGATGTGCAAAAGCAGCTTTTCTACTTTCTTCACTCAAATCCTCCCAAAATCGCCAACTCAGAGCCACTGTCCATGAACAAGCCAAGGAGAGAAAGATGCTGAGGAAAACTGTGGGAGATTTGAAGATCCAGTTGGCTAGGGAGCGTCTGAGGAATAAGAGGATCAAACTCTGCGGTTTGATGGAATTTGTTCTTCAGCTTCTGCTGGTTATCTCTCTTTCGAGTTTATTCCTTTTTGTTGCCTTCGGATTTGTTTGA MKRKWEDPQGDNFNSPTNNIELHLETPLPLEWQRCLDIQSGEIHFFNTKTQKRTSMDPRRNKLEGPTTTPNRSFHTSDHQALSLDLELNLNCQSKKKIMSSHNDDTGGGLMKLQANNYGISCPWLRFEREQQEMVARVCMQFVVYVAEIMEDVEAESKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLRKTVGDLKIQLARERLRNKRIKLCGLMEFVLQLLLVISLSSLFLFVAFGFV* Homology
BLAST of Chy4G068570 vs. ExPASy TrEMBL
Match: A0A0A0LHX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895830 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 4.2e-75 Identity = 136/141 (96.45%), Postives = 140/141 (99.29%), Query Frame = 0
BLAST of Chy4G068570 vs. ExPASy TrEMBL
Match: A0A1S3CQA1 (uncharacterized protein LOC103503587 OS=Cucumis melo OX=3656 GN=LOC103503587 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 2.6e-69 Identity = 131/141 (92.91%), Postives = 137/141 (97.16%), Query Frame = 0
BLAST of Chy4G068570 vs. ExPASy TrEMBL
Match: A0A5D3E7E0 (Putative Retrotransposon-derived protein PEG10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004900 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 2.0e-40 Identity = 101/105 (96.19%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of Chy4G068570 vs. ExPASy TrEMBL
Match: A0A0A0LJY1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895820 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 1.8e-38 Identity = 95/102 (93.14%), Postives = 100/102 (98.04%), Query Frame = 0
BLAST of Chy4G068570 vs. ExPASy TrEMBL
Match: A0A6J1F8N8 (uncharacterized protein LOC111443136 OS=Cucurbita moschata OX=3662 GN=LOC111443136 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 7.3e-35 Identity = 91/145 (62.76%), Postives = 102/145 (70.34%), Query Frame = 0
BLAST of Chy4G068570 vs. NCBI nr
Match: XP_004136212.1 (uncharacterized protein LOC101215652 [Cucumis sativus] >KGN60337.1 hypothetical protein Csa_001758 [Cucumis sativus]) HSP 1 Score: 293 bits (749), Expect = 7.81e-97 Identity = 136/141 (96.45%), Postives = 140/141 (99.29%), Query Frame = 0
BLAST of Chy4G068570 vs. NCBI nr
Match: XP_008466035.2 (PREDICTED: uncharacterized protein LOC103503587 [Cucumis melo]) HSP 1 Score: 273 bits (698), Expect = 3.46e-89 Identity = 131/141 (92.91%), Postives = 137/141 (97.16%), Query Frame = 0
BLAST of Chy4G068570 vs. NCBI nr
Match: KAG6608080.1 (hypothetical protein SDJN03_01422, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 224 bits (571), Expect = 6.04e-69 Identity = 152/312 (48.72%), Postives = 174/312 (55.77%), Query Frame = 0
BLAST of Chy4G068570 vs. NCBI nr
Match: XP_038899250.1 (uncharacterized protein LOC120086593 [Benincasa hispida]) HSP 1 Score: 205 bits (522), Expect = 8.78e-63 Identity = 113/141 (80.14%), Postives = 118/141 (83.69%), Query Frame = 0
BLAST of Chy4G068570 vs. NCBI nr
Match: KAA0038606.1 (putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa] >TYK31205.1 putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa]) HSP 1 Score: 177 bits (448), Expect = 7.50e-53 Identity = 101/105 (96.19%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of Chy4G068570 vs. TAIR 10
Match: AT1G78172.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 1.1e-06 Identity = 40/96 (41.67%), Postives = 56/96 (58.33%), Query Frame = 0
BLAST of Chy4G068570 vs. TAIR 10
Match: AT2G33510.1 (CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1); Has 3898 Blast hits to 1138 proteins in 179 species: Archae - 0; Bacteria - 40; Metazoa - 2353; Fungi - 242; Plants - 298; Viruses - 92; Other Eukaryotes - 873 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 3.5e-05 Identity = 21/61 (34.43%), Postives = 33/61 (54.10%), Query Frame = 0
BLAST of Chy4G068570 vs. TAIR 10
Match: AT1G78170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22250.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 7.7e-05 Identity = 48/161 (29.81%), Postives = 62/161 (38.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|