Chy4G068430 (gene) Cucumber (hystrix) v1

Overview
NameChy4G068430
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH04: 1133472 .. 1133723 (+)
RNA-Seq ExpressionChy4G068430
SyntenyChy4G068430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATTGAGGATAAAGACGACGAAAAACAAAAAGGGAATCTAGGTCTTGGGAGGCGGTTTCAGAGAATAGAGGAAGGGAAAAGAGGGAGCGTTGAGAAAGGGGGAATGGAGATGGAGATGGAGATGAAACGACGGCGTTTGAGAGCCGATTCTGACTCGGTGTGTTTGTGGAAAGTGGACTCGGTTGAGTCCGCTTTTGATTGCGACTTGAAAGTTGAGTTTACTTGGGCCCGAAGTTCACGAGGATAA

mRNA sequence

ATGGAGATTGAGGATAAAGACGACGAAAAACAAAAAGGGAATCTAGGTCTTGGGAGGCGGTTTCAGAGAATAGAGGAAGGGAAAAGAGGGAGCGTTGAGAAAGGGGGAATGGAGATGGAGATGGAGATGAAACGACGGCGTTTGAGAGCCGATTCTGACTCGGTGTGTTTGTGGAAAGTGGACTCGGTTGAGTCCGCTTTTGATTGCGACTTGAAAGTTGAGTTTACTTGGGCCCGAAGTTCACGAGGATAA

Coding sequence (CDS)

ATGGAGATTGAGGATAAAGACGACGAAAAACAAAAAGGGAATCTAGGTCTTGGGAGGCGGTTTCAGAGAATAGAGGAAGGGAAAAGAGGGAGCGTTGAGAAAGGGGGAATGGAGATGGAGATGGAGATGAAACGACGGCGTTTGAGAGCCGATTCTGACTCGGTGTGTTTGTGGAAAGTGGACTCGGTTGAGTCCGCTTTTGATTGCGACTTGAAAGTTGAGTTTACTTGGGCCCGAAGTTCACGAGGATAA

Protein sequence

MEIEDKDDEKQKGNLGLGRRFQRIEEGKRGSVEKGGMEMEMEMKRRRLRADSDSVCLWKVDSVESAFDCDLKVEFTWARSSRG*
Homology
[Close]
BLAST of Chy4G068430 vs. ExPASy TrEMBL
Match: A0A0A0LH48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G900990 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 5.0e-33
Identity = 75/83 (90.36%), Postives = 77/83 (92.77%), Query Frame = 0 

Query: 1  MEIEDKDDEKQKGNLGLGRRFQRIEEGKRGSVEKGGMEMEMEMKRRRLRADSDSVCLWKV 60
          MEIEDKDDE  KGNLGL RRFQRIEE K G++ KGGMEMEMEMKRRRLRADSDSVCLWKV
Sbjct: 1  MEIEDKDDETPKGNLGLERRFQRIEERKNGALRKGGMEMEMEMKRRRLRADSDSVCLWKV 60

Query: 61 DSVESAFDCDLKVEFTWARSSRG 84
          DSVESAFDCDLKVEFTWARSSRG
Sbjct: 61 DSVESAFDCDLKVEFTWARSSRG 83

[Close]
BLAST of Chy4G068430 vs. NCBI nr
Match: KGN60354.1 (hypothetical protein Csa_002333 [Cucumis sativus])

HSP 1 Score: 147 bits (371), Expect = 3.52e-44
Identity = 75/83 (90.36%), Postives = 77/83 (92.77%), Query Frame = 0 

Query: 1  MEIEDKDDEKQKGNLGLGRRFQRIEEGKRGSVEKGGMEMEMEMKRRRLRADSDSVCLWKV 60
          MEIEDKDDE  KGNLGL RRFQRIEE K G++ KGGMEMEMEMKRRRLRADSDSVCLWKV
Sbjct: 1  MEIEDKDDETPKGNLGLERRFQRIEERKNGALRKGGMEMEMEMKRRRLRADSDSVCLWKV 60

Query: 61 DSVESAFDCDLKVEFTWARSSRG 83
          DSVESAFDCDLKVEFTWARSSRG
Sbjct: 61 DSVESAFDCDLKVEFTWARSSRG 83

The following BLAST results are available for this feature:
BLAST of Chy4G068430 vs.
Match NameE-valueIdentityDescription
BLAST of Chy4G068430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LH485.0e-3390.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G900990 PE=4 SV=1[more]
BLAST of Chy4G068430 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60354.13.52e-4490.36hypothetical protein Csa_002333 [Cucumis sativus][more]
BLAST of Chy4G068430 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G068430.1Chy4G068430.1mRNA