Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACATGTGCAAAATCAGCACGTTATGGATCAAGACAAAGACAATAGGATAGACAATGATATCATGACCCGTCGACTGAAGAATCGAGAAAGGCAACGCAGATATAGAGCTCGAAAACGTCTAGAAGAAGAAATCAAGAAAGCTTCAACTACAAAACAACCAATTCAAACAGGAACATATTTTCAACCAAATGGTATTGCAAACAATCCCTTGACTCGGGTGCATTGTAGCCGAAATTGGAAGAAGGAAGCAAGAAGTGCTAATATATCTAGAGGGGTAGAAGAAGCCTCTTGTAATAGTTCCAATATGGTTGCAAAGACATCAACCAGTGAGAGTCAACTGCAGTGTGTACCTTCTAACGTCGATCCACAATTAGAAACGCCTTCACACTCCAAGACACCTGCTGAACAACTCGTCTCTGAAACAGCAAAAAAGGTGTTTGGTCGAAGAAATTGGAAAGCAGATGCGAGAAAGAAAAAGAATTGA
mRNA sequence
ATGGAACATGTGCAAAATCAGCACGTTATGGATCAAGACAAAGACAATAGGATAGACAATGATATCATGACCCGTCGACTGAAGAATCGAGAAAGGCAACGCAGATATAGAGCTCGAAAACGTCTAGAAGAAGAAATCAAGAAAGCTTCAACTACAAAACAACCAATTCAAACAGGAACATATTTTCAACCAAATGGTATTGCAAACAATCCCTTGACTCGGGTGCATTGTAGCCGAAATTGGAAGAAGGAAGCAAGAAGTGCTAATATATCTAGAGGGGTAGAAGAAGCCTCTTGTAATAGTTCCAATATGGTTGCAAAGACATCAACCAGTGAGAGTCAACTGCAGTGTGTACCTTCTAACGTCGATCCACAATTAGAAACGCCTTCACACTCCAAGACACCTGCTGAACAACTCGTCTCTGAAACAGCAAAAAAGGTGTTTGGTCGAAGAAATTGGAAAGCAGATGCGAGAAAGAAAAAGAATTGA
Coding sequence (CDS)
ATGGAACATGTGCAAAATCAGCACGTTATGGATCAAGACAAAGACAATAGGATAGACAATGATATCATGACCCGTCGACTGAAGAATCGAGAAAGGCAACGCAGATATAGAGCTCGAAAACGTCTAGAAGAAGAAATCAAGAAAGCTTCAACTACAAAACAACCAATTCAAACAGGAACATATTTTCAACCAAATGGTATTGCAAACAATCCCTTGACTCGGGTGCATTGTAGCCGAAATTGGAAGAAGGAAGCAAGAAGTGCTAATATATCTAGAGGGGTAGAAGAAGCCTCTTGTAATAGTTCCAATATGGTTGCAAAGACATCAACCAGTGAGAGTCAACTGCAGTGTGTACCTTCTAACGTCGATCCACAATTAGAAACGCCTTCACACTCCAAGACACCTGCTGAACAACTCGTCTCTGAAACAGCAAAAAAGGTGTTTGGTCGAAGAAATTGGAAAGCAGATGCGAGAAAGAAAAAGAATTGA
Protein sequence
MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTTKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTSTSESQLQCVPSNVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN*
Homology
BLAST of Chy4G068090 vs. ExPASy TrEMBL
Match:
A0A0A0LK46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902290 PE=4 SV=1)
HSP 1 Score: 305.4 bits (781), Expect = 1.4e-79
Identity = 159/162 (98.15%), Postives = 159/162 (98.15%), Query Frame = 0
Query: 1 MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTTKQPIQTGT 60
MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAST KQPIQTGT
Sbjct: 1 MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTAKQPIQTGT 60
Query: 61 YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTSTSESQLQCVPS 120
YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEE SCNSSNM AKTSTSESQLQCVPS
Sbjct: 61 YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEGSCNSSNMAAKTSTSESQLQCVPS 120
Query: 121 NVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 163
NVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN
Sbjct: 121 NVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 162
BLAST of Chy4G068090 vs. ExPASy TrEMBL
Match:
A0A1S3CQ53 (uncharacterized protein LOC103503545 OS=Cucumis melo OX=3656 GN=LOC103503545 PE=4 SV=1)
HSP 1 Score: 299.7 bits (766), Expect = 7.6e-78
Identity = 156/162 (96.30%), Postives = 158/162 (97.53%), Query Frame = 0
Query: 1 MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTTKQPIQTGT 60
MEHVQNQHVMDQDK NRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS KQPIQTGT
Sbjct: 1 MEHVQNQHVMDQDKGNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIAKQPIQTGT 60
Query: 61 YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTSTSESQLQCVPS 120
YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNM A+TSTSESQLQCVPS
Sbjct: 61 YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMAARTSTSESQLQCVPS 120
Query: 121 NVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 163
NVDPQLETPSHSKTPA+QLVSETAKKVFGRRNWKADARKKKN
Sbjct: 121 NVDPQLETPSHSKTPADQLVSETAKKVFGRRNWKADARKKKN 162
BLAST of Chy4G068090 vs. ExPASy TrEMBL
Match:
A0A5A7TB30 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004470 PE=4 SV=1)
HSP 1 Score: 268.1 bits (684), Expect = 2.4e-68
Identity = 140/147 (95.24%), Postives = 143/147 (97.28%), Query Frame = 0
Query: 1 MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTTKQPIQTGT 60
MEHVQNQHVMDQDK NRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS KQPIQTGT
Sbjct: 1 MEHVQNQHVMDQDKGNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIAKQPIQTGT 60
Query: 61 YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTSTSESQLQCVPS 120
YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNM A+TSTSESQLQCVPS
Sbjct: 61 YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMAARTSTSESQLQCVPS 120
Query: 121 NVDPQLETPSHSKTPAEQLVSETAKKV 148
NVDPQLETPSHSKTPA+QLVSETAKK+
Sbjct: 121 NVDPQLETPSHSKTPADQLVSETAKKL 147
BLAST of Chy4G068090 vs. ExPASy TrEMBL
Match:
A0A6J1HUC8 (uncharacterized protein LOC111466937 OS=Cucurbita maxima OX=3661 GN=LOC111466937 PE=4 SV=1)
HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62
Identity = 135/173 (78.03%), Postives = 146/173 (84.39%), Query Frame = 0
Query: 1 MEHVQNQHV-----------MDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA 60
ME VQN+HV DQ+K RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA
Sbjct: 1 MEIVQNKHVAEAESSFPMKLTDQEKYIRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA 60
Query: 61 STTKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTS 120
ST K P QTGTYFQPNG+ANNPLTRVHCSRNWKKEAR+A++SRG+EEASCNSSNM AK+S
Sbjct: 61 STIKHPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARNASVSRGLEEASCNSSNMAAKSS 120
Query: 121 TSESQLQCVPSNVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 163
TSE Q+QC PSN +PQ ET SHS+ P EQLVSETAKKV GRRNWKADARKKKN
Sbjct: 121 TSEGQIQCQPSNPEPQSETRSHSEPPTEQLVSETAKKVLGRRNWKADARKKKN 173
BLAST of Chy4G068090 vs. ExPASy TrEMBL
Match:
A0A6J1DPD8 (uncharacterized protein LOC111022965 OS=Momordica charantia OX=3673 GN=LOC111022965 PE=4 SV=1)
HSP 1 Score: 248.1 bits (632), Expect = 2.6e-62
Identity = 134/173 (77.46%), Postives = 149/173 (86.13%), Query Frame = 0
Query: 1 MEHVQNQHV-----------MDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA 60
ME+VQN+ V +DQ KD RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA
Sbjct: 9 MENVQNKQVCETDGSFPMKLVDQGKDYRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA 68
Query: 61 STTKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTS 120
ST KQP QTGTYFQPNGIANNPLTRVHC+RNWKK+ARS ++SRG+ EASCNSSNM A+TS
Sbjct: 69 STVKQPTQTGTYFQPNGIANNPLTRVHCTRNWKKDARSVHVSRGL-EASCNSSNMAARTS 128
Query: 121 TSESQLQCVPSNVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 163
TSESQ+QC+PSN +PQLET SH + PAEQL+S+TAKKV GRRNWKADARKKKN
Sbjct: 129 TSESQMQCLPSNPEPQLETQSHLEPPAEQLISQTAKKVLGRRNWKADARKKKN 180
BLAST of Chy4G068090 vs. NCBI nr
Match:
KGN60386.1 (hypothetical protein Csa_000782 [Cucumis sativus])
HSP 1 Score: 303 bits (776), Expect = 2.00e-103
Identity = 159/162 (98.15%), Postives = 159/162 (98.15%), Query Frame = 0
Query: 1 MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTTKQPIQTGT 60
MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAST KQPIQTGT
Sbjct: 1 MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTAKQPIQTGT 60
Query: 61 YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTSTSESQLQCVPS 120
YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEE SCNSSNM AKTSTSESQLQCVPS
Sbjct: 61 YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEGSCNSSNMAAKTSTSESQLQCVPS 120
Query: 121 NVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 162
NVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN
Sbjct: 121 NVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 162
BLAST of Chy4G068090 vs. NCBI nr
Match:
XP_008465975.1 (PREDICTED: uncharacterized protein LOC103503545 [Cucumis melo])
HSP 1 Score: 297 bits (761), Expect = 3.88e-101
Identity = 156/162 (96.30%), Postives = 158/162 (97.53%), Query Frame = 0
Query: 1 MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTTKQPIQTGT 60
MEHVQNQHVMDQDK NRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS KQPIQTGT
Sbjct: 1 MEHVQNQHVMDQDKGNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIAKQPIQTGT 60
Query: 61 YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTSTSESQLQCVPS 120
YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNM A+TSTSESQLQCVPS
Sbjct: 61 YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMAARTSTSESQLQCVPS 120
Query: 121 NVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 162
NVDPQLETPSHSKTPA+QLVSETAKKVFGRRNWKADARKKKN
Sbjct: 121 NVDPQLETPSHSKTPADQLVSETAKKVFGRRNWKADARKKKN 162
BLAST of Chy4G068090 vs. NCBI nr
Match:
KAA0038575.1 (uncharacterized protein E6C27_scaffold92G001050 [Cucumis melo var. makuwa] >TYK31167.1 uncharacterized protein E5676_scaffold455G004470 [Cucumis melo var. makuwa])
HSP 1 Score: 266 bits (679), Expect = 2.34e-88
Identity = 140/147 (95.24%), Postives = 143/147 (97.28%), Query Frame = 0
Query: 1 MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTTKQPIQTGT 60
MEHVQNQHVMDQDK NRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS KQPIQTGT
Sbjct: 1 MEHVQNQHVMDQDKGNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIAKQPIQTGT 60
Query: 61 YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTSTSESQLQCVPS 120
YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNM A+TSTSESQLQCVPS
Sbjct: 61 YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMAARTSTSESQLQCVPS 120
Query: 121 NVDPQLETPSHSKTPAEQLVSETAKKV 147
NVDPQLETPSHSKTPA+QLVSETAKK+
Sbjct: 121 NVDPQLETPSHSKTPADQLVSETAKKL 147
BLAST of Chy4G068090 vs. NCBI nr
Match:
XP_038886879.1 (uncharacterized protein LOC120077088 [Benincasa hispida])
HSP 1 Score: 265 bits (676), Expect = 4.77e-88
Identity = 141/170 (82.94%), Postives = 152/170 (89.41%), Query Frame = 0
Query: 1 MEHVQNQHV----------MDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS 60
ME+VQNQHV M+Q+KDNRI+NDIMTRRLKNRERQRRYRARKRLEEEI+KAS
Sbjct: 1 MENVQNQHVAGTESFPMKLMNQEKDNRINNDIMTRRLKNRERQRRYRARKRLEEEIRKAS 60
Query: 61 TTKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTST 120
T KQPIQTGTYFQPNG NNPL+RVHCSRNWKKEARSANISRG+EEASCNSSNM A+TST
Sbjct: 61 TIKQPIQTGTYFQPNGFKNNPLSRVHCSRNWKKEARSANISRGLEEASCNSSNMAARTST 120
Query: 121 SESQLQCVPSNVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKK 160
SESQLQC+PSNVDPQLETPSHS+ P E L+SETAKKV GRRNWKADARKK
Sbjct: 121 SESQLQCIPSNVDPQLETPSHSEPPTEWLISETAKKVLGRRNWKADARKK 170
BLAST of Chy4G068090 vs. NCBI nr
Match:
XP_022967395.1 (uncharacterized protein LOC111466937 [Cucurbita maxima] >XP_022967396.1 uncharacterized protein LOC111466937 [Cucurbita maxima])
HSP 1 Score: 247 bits (630), Expect = 5.19e-81
Identity = 135/173 (78.03%), Postives = 146/173 (84.39%), Query Frame = 0
Query: 1 MEHVQNQHVM-----------DQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA 60
ME VQN+HV DQ+K RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA
Sbjct: 1 MEIVQNKHVAEAESSFPMKLTDQEKYIRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA 60
Query: 61 STTKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTS 120
ST K P QTGTYFQPNG+ANNPLTRVHCSRNWKKEAR+A++SRG+EEASCNSSNM AK+S
Sbjct: 61 STIKHPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARNASVSRGLEEASCNSSNMAAKSS 120
Query: 121 TSESQLQCVPSNVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 162
TSE Q+QC PSN +PQ ET SHS+ P EQLVSETAKKV GRRNWKADARKKKN
Sbjct: 121 TSEGQIQCQPSNPEPQSETRSHSEPPTEQLVSETAKKVLGRRNWKADARKKKN 173
BLAST of Chy4G068090 vs. TAIR 10
Match:
AT1G32630.1 (unknown protein; Has 18 Blast hits to 18 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 12; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )
HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 55/163 (33.74%), Postives = 75/163 (46.01%), Query Frame = 0
Query: 13 DKDNRIDND-IMTRRLKNRERQRRYRARKRLEEE------------IKKASTTKQPIQTG 72
+K+ ID D +M RR+KNRERQRRYRARKR+ EE + K ++ +
Sbjct: 10 EKEGLIDKDEVMIRRMKNRERQRRYRARKRMREEEAGNDDNLSFETMGKQEEEEEEDEGL 69
Query: 73 TYFQPNGIANNPLTRVHCSRNWKKEARSAN-ISRGVEEASCNSSNMVAKTSTSESQLQCV 132
+ P+G N + RV+C RNWKKEAR A+ I +++SC S V
Sbjct: 70 EFNGPSGYVENFVRRVYCDRNWKKEARRAHLIMNKAQDSSCES----------------V 129
Query: 133 PSNVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKK 162
+ P RR+WKA+ARKKK
Sbjct: 130 KRKIRPH------------------------RRDWKAEARKKK 132
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LK46 | 1.4e-79 | 98.15 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902290 PE=4 SV=1 | [more] |
A0A1S3CQ53 | 7.6e-78 | 96.30 | uncharacterized protein LOC103503545 OS=Cucumis melo OX=3656 GN=LOC103503545 PE=... | [more] |
A0A5A7TB30 | 2.4e-68 | 95.24 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1HUC8 | 1.2e-62 | 78.03 | uncharacterized protein LOC111466937 OS=Cucurbita maxima OX=3661 GN=LOC111466937... | [more] |
A0A6J1DPD8 | 2.6e-62 | 77.46 | uncharacterized protein LOC111022965 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
Match Name | E-value | Identity | Description | |
KGN60386.1 | 2.00e-103 | 98.15 | hypothetical protein Csa_000782 [Cucumis sativus] | [more] |
XP_008465975.1 | 3.88e-101 | 96.30 | PREDICTED: uncharacterized protein LOC103503545 [Cucumis melo] | [more] |
KAA0038575.1 | 2.34e-88 | 95.24 | uncharacterized protein E6C27_scaffold92G001050 [Cucumis melo var. makuwa] >TYK3... | [more] |
XP_038886879.1 | 4.77e-88 | 82.94 | uncharacterized protein LOC120077088 [Benincasa hispida] | [more] |
XP_022967395.1 | 5.19e-81 | 78.03 | uncharacterized protein LOC111466937 [Cucurbita maxima] >XP_022967396.1 uncharac... | [more] |
Match Name | E-value | Identity | Description | |
AT1G32630.1 | 1.1e-09 | 33.74 | unknown protein; Has 18 Blast hits to 18 proteins in 10 species: Archae - 0; Bac... | [more] |