Chy4G068090 (gene) Cucumber (hystrix) v1

Overview
NameChy4G068090
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH04: 896614 .. 897102 (+)
RNA-Seq ExpressionChy4G068090
SyntenyChy4G068090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACATGTGCAAAATCAGCACGTTATGGATCAAGACAAAGACAATAGGATAGACAATGATATCATGACCCGTCGACTGAAGAATCGAGAAAGGCAACGCAGATATAGAGCTCGAAAACGTCTAGAAGAAGAAATCAAGAAAGCTTCAACTACAAAACAACCAATTCAAACAGGAACATATTTTCAACCAAATGGTATTGCAAACAATCCCTTGACTCGGGTGCATTGTAGCCGAAATTGGAAGAAGGAAGCAAGAAGTGCTAATATATCTAGAGGGGTAGAAGAAGCCTCTTGTAATAGTTCCAATATGGTTGCAAAGACATCAACCAGTGAGAGTCAACTGCAGTGTGTACCTTCTAACGTCGATCCACAATTAGAAACGCCTTCACACTCCAAGACACCTGCTGAACAACTCGTCTCTGAAACAGCAAAAAAGGTGTTTGGTCGAAGAAATTGGAAAGCAGATGCGAGAAAGAAAAAGAATTGA

mRNA sequence

ATGGAACATGTGCAAAATCAGCACGTTATGGATCAAGACAAAGACAATAGGATAGACAATGATATCATGACCCGTCGACTGAAGAATCGAGAAAGGCAACGCAGATATAGAGCTCGAAAACGTCTAGAAGAAGAAATCAAGAAAGCTTCAACTACAAAACAACCAATTCAAACAGGAACATATTTTCAACCAAATGGTATTGCAAACAATCCCTTGACTCGGGTGCATTGTAGCCGAAATTGGAAGAAGGAAGCAAGAAGTGCTAATATATCTAGAGGGGTAGAAGAAGCCTCTTGTAATAGTTCCAATATGGTTGCAAAGACATCAACCAGTGAGAGTCAACTGCAGTGTGTACCTTCTAACGTCGATCCACAATTAGAAACGCCTTCACACTCCAAGACACCTGCTGAACAACTCGTCTCTGAAACAGCAAAAAAGGTGTTTGGTCGAAGAAATTGGAAAGCAGATGCGAGAAAGAAAAAGAATTGA

Coding sequence (CDS)

ATGGAACATGTGCAAAATCAGCACGTTATGGATCAAGACAAAGACAATAGGATAGACAATGATATCATGACCCGTCGACTGAAGAATCGAGAAAGGCAACGCAGATATAGAGCTCGAAAACGTCTAGAAGAAGAAATCAAGAAAGCTTCAACTACAAAACAACCAATTCAAACAGGAACATATTTTCAACCAAATGGTATTGCAAACAATCCCTTGACTCGGGTGCATTGTAGCCGAAATTGGAAGAAGGAAGCAAGAAGTGCTAATATATCTAGAGGGGTAGAAGAAGCCTCTTGTAATAGTTCCAATATGGTTGCAAAGACATCAACCAGTGAGAGTCAACTGCAGTGTGTACCTTCTAACGTCGATCCACAATTAGAAACGCCTTCACACTCCAAGACACCTGCTGAACAACTCGTCTCTGAAACAGCAAAAAAGGTGTTTGGTCGAAGAAATTGGAAAGCAGATGCGAGAAAGAAAAAGAATTGA

Protein sequence

MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTTKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTSTSESQLQCVPSNVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN*
Homology
BLAST of Chy4G068090 vs. ExPASy TrEMBL
Match: A0A0A0LK46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902290 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.4e-79
Identity = 159/162 (98.15%), Postives = 159/162 (98.15%), Query Frame = 0

Query: 1   MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTTKQPIQTGT 60
           MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAST KQPIQTGT
Sbjct: 1   MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTAKQPIQTGT 60

Query: 61  YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTSTSESQLQCVPS 120
           YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEE SCNSSNM AKTSTSESQLQCVPS
Sbjct: 61  YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEGSCNSSNMAAKTSTSESQLQCVPS 120

Query: 121 NVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 163
           NVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN
Sbjct: 121 NVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 162

BLAST of Chy4G068090 vs. ExPASy TrEMBL
Match: A0A1S3CQ53 (uncharacterized protein LOC103503545 OS=Cucumis melo OX=3656 GN=LOC103503545 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 7.6e-78
Identity = 156/162 (96.30%), Postives = 158/162 (97.53%), Query Frame = 0

Query: 1   MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTTKQPIQTGT 60
           MEHVQNQHVMDQDK NRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS  KQPIQTGT
Sbjct: 1   MEHVQNQHVMDQDKGNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIAKQPIQTGT 60

Query: 61  YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTSTSESQLQCVPS 120
           YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNM A+TSTSESQLQCVPS
Sbjct: 61  YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMAARTSTSESQLQCVPS 120

Query: 121 NVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 163
           NVDPQLETPSHSKTPA+QLVSETAKKVFGRRNWKADARKKKN
Sbjct: 121 NVDPQLETPSHSKTPADQLVSETAKKVFGRRNWKADARKKKN 162

BLAST of Chy4G068090 vs. ExPASy TrEMBL
Match: A0A5A7TB30 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004470 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.4e-68
Identity = 140/147 (95.24%), Postives = 143/147 (97.28%), Query Frame = 0

Query: 1   MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTTKQPIQTGT 60
           MEHVQNQHVMDQDK NRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS  KQPIQTGT
Sbjct: 1   MEHVQNQHVMDQDKGNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIAKQPIQTGT 60

Query: 61  YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTSTSESQLQCVPS 120
           YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNM A+TSTSESQLQCVPS
Sbjct: 61  YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMAARTSTSESQLQCVPS 120

Query: 121 NVDPQLETPSHSKTPAEQLVSETAKKV 148
           NVDPQLETPSHSKTPA+QLVSETAKK+
Sbjct: 121 NVDPQLETPSHSKTPADQLVSETAKKL 147

BLAST of Chy4G068090 vs. ExPASy TrEMBL
Match: A0A6J1HUC8 (uncharacterized protein LOC111466937 OS=Cucurbita maxima OX=3661 GN=LOC111466937 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62
Identity = 135/173 (78.03%), Postives = 146/173 (84.39%), Query Frame = 0

Query: 1   MEHVQNQHV-----------MDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA 60
           ME VQN+HV            DQ+K  RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA
Sbjct: 1   MEIVQNKHVAEAESSFPMKLTDQEKYIRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA 60

Query: 61  STTKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTS 120
           ST K P QTGTYFQPNG+ANNPLTRVHCSRNWKKEAR+A++SRG+EEASCNSSNM AK+S
Sbjct: 61  STIKHPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARNASVSRGLEEASCNSSNMAAKSS 120

Query: 121 TSESQLQCVPSNVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 163
           TSE Q+QC PSN +PQ ET SHS+ P EQLVSETAKKV GRRNWKADARKKKN
Sbjct: 121 TSEGQIQCQPSNPEPQSETRSHSEPPTEQLVSETAKKVLGRRNWKADARKKKN 173

BLAST of Chy4G068090 vs. ExPASy TrEMBL
Match: A0A6J1DPD8 (uncharacterized protein LOC111022965 OS=Momordica charantia OX=3673 GN=LOC111022965 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.6e-62
Identity = 134/173 (77.46%), Postives = 149/173 (86.13%), Query Frame = 0

Query: 1   MEHVQNQHV-----------MDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA 60
           ME+VQN+ V           +DQ KD RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA
Sbjct: 9   MENVQNKQVCETDGSFPMKLVDQGKDYRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA 68

Query: 61  STTKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTS 120
           ST KQP QTGTYFQPNGIANNPLTRVHC+RNWKK+ARS ++SRG+ EASCNSSNM A+TS
Sbjct: 69  STVKQPTQTGTYFQPNGIANNPLTRVHCTRNWKKDARSVHVSRGL-EASCNSSNMAARTS 128

Query: 121 TSESQLQCVPSNVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 163
           TSESQ+QC+PSN +PQLET SH + PAEQL+S+TAKKV GRRNWKADARKKKN
Sbjct: 129 TSESQMQCLPSNPEPQLETQSHLEPPAEQLISQTAKKVLGRRNWKADARKKKN 180

BLAST of Chy4G068090 vs. NCBI nr
Match: KGN60386.1 (hypothetical protein Csa_000782 [Cucumis sativus])

HSP 1 Score: 303 bits (776), Expect = 2.00e-103
Identity = 159/162 (98.15%), Postives = 159/162 (98.15%), Query Frame = 0

Query: 1   MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTTKQPIQTGT 60
           MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAST KQPIQTGT
Sbjct: 1   MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTAKQPIQTGT 60

Query: 61  YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTSTSESQLQCVPS 120
           YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEE SCNSSNM AKTSTSESQLQCVPS
Sbjct: 61  YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEGSCNSSNMAAKTSTSESQLQCVPS 120

Query: 121 NVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 162
           NVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN
Sbjct: 121 NVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 162

BLAST of Chy4G068090 vs. NCBI nr
Match: XP_008465975.1 (PREDICTED: uncharacterized protein LOC103503545 [Cucumis melo])

HSP 1 Score: 297 bits (761), Expect = 3.88e-101
Identity = 156/162 (96.30%), Postives = 158/162 (97.53%), Query Frame = 0

Query: 1   MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTTKQPIQTGT 60
           MEHVQNQHVMDQDK NRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS  KQPIQTGT
Sbjct: 1   MEHVQNQHVMDQDKGNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIAKQPIQTGT 60

Query: 61  YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTSTSESQLQCVPS 120
           YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNM A+TSTSESQLQCVPS
Sbjct: 61  YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMAARTSTSESQLQCVPS 120

Query: 121 NVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 162
           NVDPQLETPSHSKTPA+QLVSETAKKVFGRRNWKADARKKKN
Sbjct: 121 NVDPQLETPSHSKTPADQLVSETAKKVFGRRNWKADARKKKN 162

BLAST of Chy4G068090 vs. NCBI nr
Match: KAA0038575.1 (uncharacterized protein E6C27_scaffold92G001050 [Cucumis melo var. makuwa] >TYK31167.1 uncharacterized protein E5676_scaffold455G004470 [Cucumis melo var. makuwa])

HSP 1 Score: 266 bits (679), Expect = 2.34e-88
Identity = 140/147 (95.24%), Postives = 143/147 (97.28%), Query Frame = 0

Query: 1   MEHVQNQHVMDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTTKQPIQTGT 60
           MEHVQNQHVMDQDK NRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS  KQPIQTGT
Sbjct: 1   MEHVQNQHVMDQDKGNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIAKQPIQTGT 60

Query: 61  YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTSTSESQLQCVPS 120
           YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNM A+TSTSESQLQCVPS
Sbjct: 61  YFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMAARTSTSESQLQCVPS 120

Query: 121 NVDPQLETPSHSKTPAEQLVSETAKKV 147
           NVDPQLETPSHSKTPA+QLVSETAKK+
Sbjct: 121 NVDPQLETPSHSKTPADQLVSETAKKL 147

BLAST of Chy4G068090 vs. NCBI nr
Match: XP_038886879.1 (uncharacterized protein LOC120077088 [Benincasa hispida])

HSP 1 Score: 265 bits (676), Expect = 4.77e-88
Identity = 141/170 (82.94%), Postives = 152/170 (89.41%), Query Frame = 0

Query: 1   MEHVQNQHV----------MDQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS 60
           ME+VQNQHV          M+Q+KDNRI+NDIMTRRLKNRERQRRYRARKRLEEEI+KAS
Sbjct: 1   MENVQNQHVAGTESFPMKLMNQEKDNRINNDIMTRRLKNRERQRRYRARKRLEEEIRKAS 60

Query: 61  TTKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTST 120
           T KQPIQTGTYFQPNG  NNPL+RVHCSRNWKKEARSANISRG+EEASCNSSNM A+TST
Sbjct: 61  TIKQPIQTGTYFQPNGFKNNPLSRVHCSRNWKKEARSANISRGLEEASCNSSNMAARTST 120

Query: 121 SESQLQCVPSNVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKK 160
           SESQLQC+PSNVDPQLETPSHS+ P E L+SETAKKV GRRNWKADARKK
Sbjct: 121 SESQLQCIPSNVDPQLETPSHSEPPTEWLISETAKKVLGRRNWKADARKK 170

BLAST of Chy4G068090 vs. NCBI nr
Match: XP_022967395.1 (uncharacterized protein LOC111466937 [Cucurbita maxima] >XP_022967396.1 uncharacterized protein LOC111466937 [Cucurbita maxima])

HSP 1 Score: 247 bits (630), Expect = 5.19e-81
Identity = 135/173 (78.03%), Postives = 146/173 (84.39%), Query Frame = 0

Query: 1   MEHVQNQHVM-----------DQDKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA 60
           ME VQN+HV            DQ+K  RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA
Sbjct: 1   MEIVQNKHVAEAESSFPMKLTDQEKYIRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA 60

Query: 61  STTKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSANISRGVEEASCNSSNMVAKTS 120
           ST K P QTGTYFQPNG+ANNPLTRVHCSRNWKKEAR+A++SRG+EEASCNSSNM AK+S
Sbjct: 61  STIKHPTQTGTYFQPNGVANNPLTRVHCSRNWKKEARNASVSRGLEEASCNSSNMAAKSS 120

Query: 121 TSESQLQCVPSNVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKKN 162
           TSE Q+QC PSN +PQ ET SHS+ P EQLVSETAKKV GRRNWKADARKKKN
Sbjct: 121 TSEGQIQCQPSNPEPQSETRSHSEPPTEQLVSETAKKVLGRRNWKADARKKKN 173

BLAST of Chy4G068090 vs. TAIR 10
Match: AT1G32630.1 (unknown protein; Has 18 Blast hits to 18 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 12; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 55/163 (33.74%), Postives = 75/163 (46.01%), Query Frame = 0

Query: 13  DKDNRIDND-IMTRRLKNRERQRRYRARKRLEEE------------IKKASTTKQPIQTG 72
           +K+  ID D +M RR+KNRERQRRYRARKR+ EE            + K    ++  +  
Sbjct: 10  EKEGLIDKDEVMIRRMKNRERQRRYRARKRMREEEAGNDDNLSFETMGKQEEEEEEDEGL 69

Query: 73  TYFQPNGIANNPLTRVHCSRNWKKEARSAN-ISRGVEEASCNSSNMVAKTSTSESQLQCV 132
            +  P+G   N + RV+C RNWKKEAR A+ I    +++SC S                V
Sbjct: 70  EFNGPSGYVENFVRRVYCDRNWKKEARRAHLIMNKAQDSSCES----------------V 129

Query: 133 PSNVDPQLETPSHSKTPAEQLVSETAKKVFGRRNWKADARKKK 162
              + P                         RR+WKA+ARKKK
Sbjct: 130 KRKIRPH------------------------RRDWKAEARKKK 132

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LK461.4e-7998.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902290 PE=4 SV=1[more]
A0A1S3CQ537.6e-7896.30uncharacterized protein LOC103503545 OS=Cucumis melo OX=3656 GN=LOC103503545 PE=... [more]
A0A5A7TB302.4e-6895.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1HUC81.2e-6278.03uncharacterized protein LOC111466937 OS=Cucurbita maxima OX=3661 GN=LOC111466937... [more]
A0A6J1DPD82.6e-6277.46uncharacterized protein LOC111022965 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
Match NameE-valueIdentityDescription
KGN60386.12.00e-10398.15hypothetical protein Csa_000782 [Cucumis sativus][more]
XP_008465975.13.88e-10196.30PREDICTED: uncharacterized protein LOC103503545 [Cucumis melo][more]
KAA0038575.12.34e-8895.24uncharacterized protein E6C27_scaffold92G001050 [Cucumis melo var. makuwa] >TYK3... [more]
XP_038886879.14.77e-8882.94uncharacterized protein LOC120077088 [Benincasa hispida][more]
XP_022967395.15.19e-8178.03uncharacterized protein LOC111466937 [Cucurbita maxima] >XP_022967396.1 uncharac... [more]
Match NameE-valueIdentityDescription
AT1G32630.11.1e-0933.74unknown protein; Has 18 Blast hits to 18 proteins in 10 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G068090.1Chy4G068090.1mRNA