Chy4G067260 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G067260
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	remorin
Location	chrH04: 120431 .. 122105 (+)
RNA-Seq Expression	Chy4G067260
Synteny	Chy4G067260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAAGAATCCAAGAAGATCGAATCCCCGCCCCCCTCCGATCCTCCTCAAGAACTCCCCAAAGACGTCGCCGAGGAGAAATCCGTCATTCCCCCACCGCCTGAACACAAAACTGATGACTCTAAAGCCCTTGTTCTCGTTGAAAGTAAGTCAATTCTTCACTACACCAACCCCAACCCCAACCCCCTCTCCTTTTCTTTTTCCCTCTAACTTTTCTCTCTTCTTTTTTATTTATTTATTTATTATTAATCTTTTCAGCTCAGAGTTTTCTTCTATATTTAATTCTGATGAATTTGATTCAATTTTACTGTGTGCTGTCAATTGGGAAAATGGAGTTTTTTGTTTGGCTGCTGGAATGGAAATCACCAGAAAGTAGACACCTACTTTTTCCACTCATAAATTATTTTTAGTTAATCTCTTGTTGTTTTCTTGCAGAGGTTCCAGAAGTTGCTGACCCCAAAACCACTGAAGGCTCTGTAAACAGAGGTCTATTTAGGGAAAAGAAAAATCACCCTAATCTATTTCTTTTTCATTTTTATTATTTCCTAAATTCTTAAATTTAATTGTAAATTTGATTCTTTCCATAGATTAGAATTATAGTCTTTTAAGAAAAAAAAAAAAAACAAAAAAACTAAATTCTATAAGCATAGAGATCAAACATGAAATTTAATTTATTCCTACATATTTTGACATAGATCTTGTGGAATAGTTAAACAATTAAAAGAAGTATTTTAGGCTAAAACAGAATCTTGAAATGTATAAAACTAAAATAGGAAGATGATTTTATAATAAATTTAGGTTTGTAATCCATTAATAGTAATTTTCTTTTCACTTCTGGAATCTTAGTGATGCAAATATTGTATTATATATAAACTTTAGGTTAAATAAAGAGAAAAAAAGAAGAGAGTGGTTGGGATTGGGAAACAGAGAGCTGGAATTTATATAATATAAAAAGAAAATAGGATTTAAAAGTAAGTAATATTATTTAGAGTGAAAGCTAAGAGTGAGTTTATGTGAATATAATTTGTTGGGATACACACAGATGCTGTGCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCTCTCGTTAAAGCTTGGGAAGAAAGTGAAAAGTCCAAGGCAGAGAACAAGTAAGACCACACAATTTTCCAATTTCTAATTATGTAATATTTTTCATTTTTAATAATATATGCATATATTAATTTTCTTAATCTTATAAGACCAACTTATTTTTTCCAACACTCCTTATATAGAAGTGAATTGAATCTTGTTTTCAGAGCCCACAAAAAGCTATCTTCTGTTGCCGCATGGGAGAATAGCCAAAAAGCTTCTGTAGAAGCTGACTTGAAGAAGATTGAGGTATTAAAATATATTTTACAATACAGACAAACATGGTTGAGTTGATTTGTAGTTTGGGAGTGATATTATTTTGACGACAGACAGCTAGCTAATTAAACAAAACTTTGAGCAGGAAAGTTTGGAGATAAAGAAGGCCGAGTACATTGAGAAAATGAAGAACAAAATTGCTCTGCTCCACAAATCGGCGGAGGAAAAGAGGGCGATAATCGAAGCCAAGCGAGGAGAAGATCTTCTCAAAGCAGAGGAGACGGCTGCAAAGTACCGTGCCACCGGTACTGCCCCAAAGAAGCTTCTCGGCTGCTTCTCGAGTTGA

mRNA sequence

ATGGCTGAAGAATCCAAGAAGATCGAATCCCCGCCCCCCTCCGATCCTCCTCAAGAACTCCCCAAAGACGTCGCCGAGGAGAAATCCGTCATTCCCCCACCGCCTGAACACAAAACTGATGACTCTAAAGCCCTTGTTCTCGTTGAAAAGGTTCCAGAAGTTGCTGACCCCAAAACCACTGAAGGCTCTGTAAACAGAGATGCTGTGCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCTCTCGTTAAAGCTTGGGAAGAAAGTGAAAAGTCCAAGGCAGAGAACAAAGCCCACAAAAAGCTATCTTCTGTTGCCGCATGGGAGAATAGCCAAAAAGCTTCTGTAGAAGCTGACTTGAAGAAGATTGAGGAAAGTTTGGAGATAAAGAAGGCCGAGTACATTGAGAAAATGAAGAACAAAATTGCTCTGCTCCACAAATCGGCGGAGGAAAAGAGGGCGATAATCGAAGCCAAGCGAGGAGAAGATCTTCTCAAAGCAGAGGAGACGGCTGCAAAGTACCGTGCCACCGGTACTGCCCCAAAGAAGCTTCTCGGCTGCTTCTCGAGTTGA

Coding sequence (CDS)

ATGGCTGAAGAATCCAAGAAGATCGAATCCCCGCCCCCCTCCGATCCTCCTCAAGAACTCCCCAAAGACGTCGCCGAGGAGAAATCCGTCATTCCCCCACCGCCTGAACACAAAACTGATGACTCTAAAGCCCTTGTTCTCGTTGAAAAGGTTCCAGAAGTTGCTGACCCCAAAACCACTGAAGGCTCTGTAAACAGAGATGCTGTGCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCTCTCGTTAAAGCTTGGGAAGAAAGTGAAAAGTCCAAGGCAGAGAACAAAGCCCACAAAAAGCTATCTTCTGTTGCCGCATGGGAGAATAGCCAAAAAGCTTCTGTAGAAGCTGACTTGAAGAAGATTGAGGAAAGTTTGGAGATAAAGAAGGCCGAGTACATTGAGAAAATGAAGAACAAAATTGCTCTGCTCCACAAATCGGCGGAGGAAAAGAGGGCGATAATCGAAGCCAAGCGAGGAGAAGATCTTCTCAAAGCAGAGGAGACGGCTGCAAAGTACCGTGCCACCGGTACTGCCCCAAAGAAGCTTCTCGGCTGCTTCTCGAGTTGA

Protein sequence

MAEESKKIESPPPSDPPQELPKDVAEEKSVIPPPPEHKTDDSKALVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQKASVEADLKKIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRATGTAPKKLLGCFSS*

Homology

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BLAST of Chy4G067260 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.4e-58
Identity = 141/199 (70.85%), Postives = 165/199 (82.91%), Query Frame = 0


Query: 1   MAE-ESKKIE---SPPPSDPPQELPKD-VAEEKSVI----PPPPE--HKTDDSKALVLVE 60
           MAE E+KK+E     PP+  P E PK+ VA+EK+++    PPP E   K DDSKALV+VE
Sbjct: 1   MAELEAKKVEIVDPAPPAPGPVEAPKEVVADEKAIVAPALPPPAEEKEKPDDSKALVVVE 60

Query: 61  -KVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWE 120
            K PE AD K  EGS++RDAVLA+VATEKR+SL+KAWEESEKSKAENKA KK+S++ AWE
Sbjct: 61  TKAPEPADEK-KEGSIDRDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWE 120

Query: 121 NSQKASVEADLKKIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEE 180
           NS+KA++EA+LKK+EE LE KKAEY EKMKNKIALLHK AEEKRA+IEAKRGEDLLKAEE
Sbjct: 121 NSKKANLEAELKKMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEE 180

Query: 181 TAAKYRATGTAPKKLLGCF 188
            AAKYRATGTAPKK+LG F
Sbjct: 181 LAAKYRATGTAPKKILGIF 198

[Close]

BLAST of Chy4G067260 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.8e-51
Identity = 126/200 (63.00%), Postives = 151/200 (75.50%), Query Frame = 0


Query: 3   EESKKI-----ESPPPSDPPQELP---KDVA-EEKSVIPP-------PPEHKTDDSKALV 62
           EE KK+     E  P  + P E P    DVA +EK V PP       P E K +DSKA+V
Sbjct: 4   EEPKKVTETVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIV 63

Query: 63  LVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAA 122
            V  VP+  + +  EGSVNRDAVLA+V TEKR+SL+KAWEE+EK K ENKA KKLSS+ +
Sbjct: 64  PV--VPKEVEEEKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGS 123

Query: 123 WENSQKASVEADLKKIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKA 182
           WEN++KA+VEA+LKK+EE LE KKAEY+E+MKNKIA +HK AEEKRA+IEAKRGE++LKA
Sbjct: 124 WENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKA 183

Query: 183 EETAAKYRATGTAPKKLLGC 187
           EE AAKYRATGTAPKKL GC
Sbjct: 184 EELAAKYRATGTAPKKLFGC 201

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BLAST of Chy4G067260 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.8e-51
Identity = 119/182 (65.38%), Postives = 141/182 (77.47%), Query Frame = 0


Query: 7   KIESPPPSDPPQELPKDVAEEKSVIPPPPEHKTDDSKALVLVEK-VPEVADPKTTEGSVN 66
           +I +P P+  P ++ KDVAEEK +  PPPE   DDSKAL +VEK V E A  K    S++
Sbjct: 32  EIPAPAPAPTPADVTKDVAEEK-IQNPPPEQIFDDSKALTVVEKPVEEPAPAKPASASLD 91

Query: 67  RDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQKASVEADLKKIEES 126
           RD  LA ++ EKRLS V+AWEESEKSKAENKA KK++ V AWENS+KA+VEA LKKIEE 
Sbjct: 92  RDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQ 151

Query: 127 LEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRATGTAPKKLLG 186
           LE KKAEY E+MKNK+A +HK AEE+RA+IEAKRGED+LKAEETAAKYRATG  PK   G
Sbjct: 152 LEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCG 211

Query: 187 CF 188
           CF
Sbjct: 212 CF 212

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BLAST of Chy4G067260 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 5.6e-45
Identity = 114/195 (58.46%), Postives = 138/195 (70.77%), Query Frame = 0


Query: 1   MAEESK----KIESP---PPSDPPQELPKDVAEEKSVIPPPPEHKTDDSKALVLVEK-VP 60
           MAEE K     +ESP    P+  P   P +VA+EK   PPP E     SKAL +VEK + 
Sbjct: 1   MAEEQKTSKVDVESPAVLAPAKEPTPAPVEVADEKIHNPPPVE-----SKALAVVEKPIE 60

Query: 61  EVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQK 120
           E    K + GS +RD +LA +  EK+ S +KAWEESEKSKAEN+A KK+S V AWENS+K
Sbjct: 61  EHTPKKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKK 120

Query: 121 ASVEADLKKIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAK 180
           A+VEA L+KIEE LE KKA+Y EKMKNK+A +HK AEEKRA++EAK+GE+LLKAEE  AK
Sbjct: 121 AAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAK 180

Query: 181 YRATGTAPKKLLGCF 188
           YRATG  PK   GCF
Sbjct: 181 YRATGVVPKATCGCF 190

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BLAST of Chy4G067260 vs. ExPASy Swiss-Prot
Match: Q7XII4 (Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 9.9e-10
Identity = 46/132 (34.85%), Postives = 69/132 (52.27%), Query Frame = 0


Query: 51  VPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENS 110
           +P   D  +  G    +  + +V  E+  S + AW+ +E +K  N+  ++   +  WE  
Sbjct: 181 LPAPGDVSSAGGGHGDEVSVGQVKKEEVESKIAAWQIAEVAKVNNRFKREEVVINGWEGD 240

Query: 111 QKASVEADLKKIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETA 170
           Q     A LKK E  LE K+A+ +EK +N++A   + AEEKRA  EAKRG  + +  E A
Sbjct: 241 QVEKANAWLKKYERKLEEKRAKAMEKAQNEVAKARRKAEEKRASAEAKRGTKVARVLELA 300

Query: 171 AKYRATGTAPKK 183
              RA G AP K
Sbjct: 301 NFMRAVGRAPSK 312

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BLAST of Chy4G067260 vs. ExPASy TrEMBL
Match: A0A0A0LKG1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G915100 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.5e-88
Identity = 184/189 (97.35%), Postives = 187/189 (98.94%), Query Frame = 0


Query: 1   MAEESKKIESPPPSDPPQELPKDVAEEKSVIPPPPEHKTDDSKALVLVEKVPEVADPKTT 60
           MAEESKKIESPPPSDPPQ+LPKDV EEKSVIPPPPEHKTDDSKALVLVEKVPEVADPKTT
Sbjct: 1   MAEESKKIESPPPSDPPQQLPKDVTEEKSVIPPPPEHKTDDSKALVLVEKVPEVADPKTT 60

Query: 61  EGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQKASVEADLK 120
           EGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQKASVEADLK
Sbjct: 61  EGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQKASVEADLK 120

Query: 121 KIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRATGTAP 180
           KIEESLE KKA+YIE+MKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRATGTAP
Sbjct: 121 KIEESLEKKKAKYIEQMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRATGTAP 180

Query: 181 KKLLGCFSS 190
           KKLLGCFSS
Sbjct: 181 KKLLGCFSS 189

[Close]

BLAST of Chy4G067260 vs. ExPASy TrEMBL
Match: A0A1S3CPW1 (remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.3e-84
Identity = 181/193 (93.78%), Postives = 186/193 (96.37%), Query Frame = 0


Query: 1   MAEESKKIESPPPSD----PPQELPKDVAEEKSVIPPPPEHKTDDSKALVLVEKVPEVAD 60
           MAEESKKIESPPPSD    PP+ELPKDVAEEKSVIPPPPE KTDDSKALVLVEKVPEVAD
Sbjct: 1   MAEESKKIESPPPSDPPPPPPEELPKDVAEEKSVIPPPPEDKTDDSKALVLVEKVPEVAD 60

Query: 61  PKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQKASVE 120
           PK+TEGSVNRDAVLAKVATEKRLSL+KAWEESEKSKAENKAHKKLSSVAAWENS+KASVE
Sbjct: 61  PKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVAAWENSKKASVE 120

Query: 121 ADLKKIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRAT 180
           A+LKKIEESLE KK EYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRAT
Sbjct: 121 AELKKIEESLEKKKGEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRAT 180

Query: 181 GTAPKKLLGCFSS 190
           GTAPKKLLGCFSS
Sbjct: 181 GTAPKKLLGCFSS 193

[Close]

BLAST of Chy4G067260 vs. ExPASy TrEMBL
Match: A0A6J1GJE1 (remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111454820 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.8e-73
Identity = 163/200 (81.50%), Postives = 175/200 (87.50%), Query Frame = 0


Query: 1   MAEESKKIESPPPSDPPQELPKDVAEEKSVIPPPP-----------EHKTDDSKALVLVE 60
           MA++S     PPP  PPQELPKDVAEEK+VIPPPP           EHKTDDSKALVLVE
Sbjct: 1   MADQSTPPSDPPP-PPPQELPKDVAEEKTVIPPPPPSAPVPAPTPAEHKTDDSKALVLVE 60

Query: 61  KVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWEN 120
           KVPE  + K++EGSVNRDAVLAKVATEKR+SL+KAWEESEKSKAENKAHKKLSSV AWEN
Sbjct: 61  KVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120

Query: 121 SQKASVEADLKKIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEET 180
           S+KASVEA+LKKIEE+LE KKAEYIEKMKNKIALLHK AEEKRAIIEAKRGE+LLKAEET
Sbjct: 121 SRKASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEET 180

Query: 181 AAKYRATGTAPKKLLGCFSS 190
           AAKYRATGTAPKKLL CFSS
Sbjct: 181 AAKYRATGTAPKKLLSCFSS 199

[Close]

BLAST of Chy4G067260 vs. ExPASy TrEMBL
Match: A0A6J1DYY5 (remorin-like OS=Momordica charantia OX=3673 GN=LOC111025889 PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72
Identity = 162/193 (83.94%), Postives = 173/193 (89.64%), Query Frame = 0


Query: 1   MAEESKKIESPPPSDPPQELPKDVAEEKSVIPPPP------EHKTDDSKALVLVEKVPEV 60
           MAEESK  ES PP  P +E+PKDVAEEK+VIPPPP      +   DDSKALVLVEKVPE 
Sbjct: 1   MAEESKNPESTPP--PAEEVPKDVAEEKTVIPPPPPPPPAEDKPADDSKALVLVEKVPEA 60

Query: 61  ADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQKAS 120
           A+PK+ EGSVNRD VLAKVATEKR+SL+KAWEESEKSKAENKAHKKLSSV AWENS+KAS
Sbjct: 61  AEPKSAEGSVNRDTVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWENSKKAS 120

Query: 121 VEADLKKIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYR 180
           VEA+LKKIEESLE KKAEYIEKMKNKIALLHK+AEEKRAIIEAKRGEDLLKAEETAAKYR
Sbjct: 121 VEAELKKIEESLEKKKAEYIEKMKNKIALLHKTAEEKRAIIEAKRGEDLLKAEETAAKYR 180

Query: 181 ATGTAPKKLLGCF 188
           ATGTAPKKLLGCF
Sbjct: 181 ATGTAPKKLLGCF 191

[Close]

BLAST of Chy4G067260 vs. ExPASy TrEMBL
Match: A0A6J1I6W2 (remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111470544 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.5e-72
Identity = 160/193 (82.90%), Postives = 171/193 (88.60%), Query Frame = 0


Query: 9   ESPPPSD-PPQELPKDVAEEKSVIPPPP-----------EHKTDDSKALVLVEKVPEVAD 68
           +S PPSD PPQELPKDVAEEK+VIPPPP           EHKTDDSKALVLVEK PE  +
Sbjct: 4   QSTPPSDPPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEKAPEAGE 63

Query: 69  PKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQKASVE 128
            K++EGSVNRDAVLAKVATEKR+SL+KAWEESEKSKAENKAHKK SSV AWENS+KASVE
Sbjct: 64  AKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKAHKKFSSVVAWENSRKASVE 123

Query: 129 ADLKKIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRAT 188
           A+LKKIEE+LE KKAEYIEKMKNKIALLHK AEEKRAIIEAKRGE+LLKAEETAAKYRAT
Sbjct: 124 AELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKYRAT 183

Query: 189 GTAPKKLLGCFSS 190
           GTAPKKLL CFSS
Sbjct: 184 GTAPKKLLSCFSS 196

[Close]

BLAST of Chy4G067260 vs. NCBI nr
Match: XP_011652698.1 (remorin [Cucumis sativus] >KGN60481.1 hypothetical protein Csa_002244 [Cucumis sativus])

HSP 1 Score: 333 bits (855), Expect = 1.39e-114
Identity = 184/189 (97.35%), Postives = 187/189 (98.94%), Query Frame = 0


Query: 1   MAEESKKIESPPPSDPPQELPKDVAEEKSVIPPPPEHKTDDSKALVLVEKVPEVADPKTT 60
           MAEESKKIESPPPSDPPQ+LPKDV EEKSVIPPPPEHKTDDSKALVLVEKVPEVADPKTT
Sbjct: 1   MAEESKKIESPPPSDPPQQLPKDVTEEKSVIPPPPEHKTDDSKALVLVEKVPEVADPKTT 60

Query: 61  EGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQKASVEADLK 120
           EGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQKASVEADLK
Sbjct: 61  EGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQKASVEADLK 120

Query: 121 KIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRATGTAP 180
           KIEESLE KKA+YIE+MKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRATGTAP
Sbjct: 121 KIEESLEKKKAKYIEQMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRATGTAP 180

Query: 181 KKLLGCFSS 189
           KKLLGCFSS
Sbjct: 181 KKLLGCFSS 189

[Close]

BLAST of Chy4G067260 vs. NCBI nr
Match: XP_008465865.1 (PREDICTED: remorin [Cucumis melo])

HSP 1 Score: 322 bits (826), Expect = 4.19e-110
Identity = 181/193 (93.78%), Postives = 186/193 (96.37%), Query Frame = 0


Query: 1   MAEESKKIESPPPSDPP----QELPKDVAEEKSVIPPPPEHKTDDSKALVLVEKVPEVAD 60
           MAEESKKIESPPPSDPP    +ELPKDVAEEKSVIPPPPE KTDDSKALVLVEKVPEVAD
Sbjct: 1   MAEESKKIESPPPSDPPPPPPEELPKDVAEEKSVIPPPPEDKTDDSKALVLVEKVPEVAD 60

Query: 61  PKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQKASVE 120
           PK+TEGSVNRDAVLAKVATEKRLSL+KAWEESEKSKAENKAHKKLSSVAAWENS+KASVE
Sbjct: 61  PKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVAAWENSKKASVE 120

Query: 121 ADLKKIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRAT 180
           A+LKKIEESLE KK EYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRAT
Sbjct: 121 AELKKIEESLEKKKGEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRAT 180

Query: 181 GTAPKKLLGCFSS 189
           GTAPKKLLGCFSS
Sbjct: 181 GTAPKKLLGCFSS 193

[Close]

BLAST of Chy4G067260 vs. NCBI nr
Match: XP_038888841.1 (LOW QUALITY PROTEIN: remorin-like [Benincasa hispida])

HSP 1 Score: 291 bits (744), Expect = 1.60e-97
Identity = 172/200 (86.00%), Postives = 181/200 (90.50%), Query Frame = 0


Query: 1   MAEESKKIE-SPPPSDP-------PQELPKDVAEEKSVIPPPPE---HKTDDSKALVLVE 60
           MAEESKKIE +PPPSDP       PQELPKDVAEEKSVIPPPP     K DDS+ALVLVE
Sbjct: 1   MAEESKKIEFTPPPSDPTPPPPPPPQELPKDVAEEKSVIPPPPPPLTKKPDDSQALVLVE 60

Query: 61  KVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWEN 120
            VPE A+PK+TEGSVNRDAVLAKVATEKRLSL+KAWEESEKSKAENKAHKKLSSV AWEN
Sbjct: 61  -VPEAAEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120

Query: 121 SQKASVEADLKKIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEET 180
           S+KASVEA+LKKIEESLE KKAEYIEKMKNKIALLHK+AEEKRA+IEAKRGEDLLKAEE 
Sbjct: 121 SRKASVEAELKKIEESLEKKKAEYIEKMKNKIALLHKAAEEKRAMIEAKRGEDLLKAEEM 180

Query: 181 AAKYRATGTAPKKLLGCFSS 189
           AAKYRATGTAPKKLLGCFSS
Sbjct: 181 AAKYRATGTAPKKLLGCFSS 199

[Close]

BLAST of Chy4G067260 vs. NCBI nr
Match: XP_022952053.1 (remorin-like [Cucurbita moschata])

HSP 1 Score: 285 bits (728), Expect = 4.37e-95
Identity = 163/200 (81.50%), Postives = 175/200 (87.50%), Query Frame = 0


Query: 1   MAEESKKIESPPPSDPPQELPKDVAEEKSVIPPPP-----------EHKTDDSKALVLVE 60
           MA++S     PPP  PPQELPKDVAEEK+VIPPPP           EHKTDDSKALVLVE
Sbjct: 1   MADQSTPPSDPPPP-PPQELPKDVAEEKTVIPPPPPSAPVPAPTPAEHKTDDSKALVLVE 60

Query: 61  KVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWEN 120
           KVPE  + K++EGSVNRDAVLAKVATEKR+SL+KAWEESEKSKAENKAHKKLSSV AWEN
Sbjct: 61  KVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120

Query: 121 SQKASVEADLKKIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEET 180
           S+KASVEA+LKKIEE+LE KKAEYIEKMKNKIALLHK AEEKRAIIEAKRGE+LLKAEET
Sbjct: 121 SRKASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEET 180

Query: 181 AAKYRATGTAPKKLLGCFSS 189
           AAKYRATGTAPKKLL CFSS
Sbjct: 181 AAKYRATGTAPKKLLSCFSS 199

[Close]

BLAST of Chy4G067260 vs. NCBI nr
Match: KAG7011502.1 (hypothetical protein SDJN02_26408 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 283 bits (725), Expect = 1.25e-94
Identity = 162/200 (81.00%), Postives = 175/200 (87.50%), Query Frame = 0


Query: 1   MAEESKKIESPPPSDPPQELPKDVAEEKSVIPPPP-----------EHKTDDSKALVLVE 60
           MA++S     PPP  PPQELPKDVAEEK+VIPPPP           EHKTDDSKALVLVE
Sbjct: 1   MADQSTPPSDPPPP-PPQELPKDVAEEKTVIPPPPPSAPVPAPTPAEHKTDDSKALVLVE 60

Query: 61  KVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWEN 120
           KVPE  + K++EGSVNRDAVLAKVATEKR+SL+KAWEESEKSKAENKAHKKLSSV AWEN
Sbjct: 61  KVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120

Query: 121 SQKASVEADLKKIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEET 180
           S+KASVEA+LK+IEE+LE KKAEYIEKMKNKIALLHK AEEKRAIIEAKRGE+LLKAEET
Sbjct: 121 SRKASVEAELKRIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEET 180

Query: 181 AAKYRATGTAPKKLLGCFSS 189
           AAKYRATGTAPKKLL CFSS
Sbjct: 181 AAKYRATGTAPKKLLSCFSS 199

[Close]

BLAST of Chy4G067260 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 201.8 bits (512), Expect = 4.8e-52
Identity = 119/182 (65.38%), Postives = 141/182 (77.47%), Query Frame = 0


Query: 7   KIESPPPSDPPQELPKDVAEEKSVIPPPPEHKTDDSKALVLVEK-VPEVADPKTTEGSVN 66
           +I +P P+  P ++ KDVAEEK +  PPPE   DDSKAL +VEK V E A  K    S++
Sbjct: 32  EIPAPAPAPTPADVTKDVAEEK-IQNPPPEQIFDDSKALTVVEKPVEEPAPAKPASASLD 91

Query: 67  RDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQKASVEADLKKIEES 126
           RD  LA ++ EKRLS V+AWEESEKSKAENKA KK++ V AWENS+KA+VEA LKKIEE 
Sbjct: 92  RDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQ 151

Query: 127 LEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRATGTAPKKLLG 186
           LE KKAEY E+MKNK+A +HK AEE+RA+IEAKRGED+LKAEETAAKYRATG  PK   G
Sbjct: 152 LEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCG 211

Query: 187 CF 188
           CF
Sbjct: 212 CF 212

[Close]

BLAST of Chy4G067260 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 201.8 bits (512), Expect = 4.8e-52
Identity = 126/200 (63.00%), Postives = 151/200 (75.50%), Query Frame = 0


Query: 3   EESKKI-----ESPPPSDPPQELP---KDVA-EEKSVIPP-------PPEHKTDDSKALV 62
           EE KK+     E  P  + P E P    DVA +EK V PP       P E K +DSKA+V
Sbjct: 4   EEPKKVTETVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIV 63

Query: 63  LVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAA 122
            V  VP+  + +  EGSVNRDAVLA+V TEKR+SL+KAWEE+EK K ENKA KKLSS+ +
Sbjct: 64  PV--VPKEVEEEKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGS 123

Query: 123 WENSQKASVEADLKKIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKA 182
           WEN++KA+VEA+LKK+EE LE KKAEY+E+MKNKIA +HK AEEKRA+IEAKRGE++LKA
Sbjct: 124 WENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKA 183

Query: 183 EETAAKYRATGTAPKKLLGC 187
           EE AAKYRATGTAPKKL GC
Sbjct: 184 EELAAKYRATGTAPKKLFGC 201

[Close]

BLAST of Chy4G067260 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 201.1 bits (510), Expect = 8.2e-52
Identity = 128/200 (64.00%), Postives = 152/200 (76.00%), Query Frame = 0


Query: 3   EESKKI-----ESPPPSDPPQELP---KDVA-EEKSVIPP-------PPEHKTDDSKALV 62
           EE KK+     E  P  + P E P    DVA +EK V PP       P E K +DSKA+V
Sbjct: 4   EEPKKVTETVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIV 63

Query: 63  LVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAA 122
            V  VP+V + K  EGSVNRDAVLA+V TEKR+SL+KAWEE+EK K ENKA KKLSS+ +
Sbjct: 64  PV--VPKVEEEK-KEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGS 123

Query: 123 WENSQKASVEADLKKIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKA 182
           WEN++KA+VEA+LKK+EE LE KKAEY+E+MKNKIA +HK AEEKRA+IEAKRGE++LKA
Sbjct: 124 WENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKA 183

Query: 183 EETAAKYRATGTAPKKLLGC 187
           EE AAKYRATGTAPKKL GC
Sbjct: 184 EELAAKYRATGTAPKKLFGC 200

[Close]

BLAST of Chy4G067260 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 193.0 bits (489), Expect = 2.2e-49
Identity = 113/168 (67.26%), Postives = 132/168 (78.57%), Query Frame = 0


Query: 20  LPKDVAEEKSVIPPPPEHKTDDSKALVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRL 79
           +P+ VA E S  PP  E K+DDSKA+VLV    E  + K   GSV+RDAVL ++  +KR+
Sbjct: 11  MPEAVASEPS--PPSKEEKSDDSKAIVLVVAAKEPTEDKKV-GSVHRDAVLVRLEQDKRI 70

Query: 80  SLVKAWEESEKSKAENKAHKKLSSVAAWENSQKASVEADLKKIEESLEIKKAEYIEKMKN 139
           SL+KAWEE+EKSK ENKA KK+SSV AWENS+KASVEA+LKKIEE L  KKA Y E+MKN
Sbjct: 71  SLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIEEQLNKKKAHYTEQMKN 130

Query: 140 KIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRATGTAPKKLLGCF 188
           KIA +HK AEEKRA+ EAKRGED+LKAEE AAKYRATGTAP KL G F
Sbjct: 131 KIAQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTKLFGFF 175

[Close]

BLAST of Chy4G067260 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 182.2 bits (461), Expect = 3.9e-46
Identity = 114/195 (58.46%), Postives = 138/195 (70.77%), Query Frame = 0


Query: 1   MAEESK----KIESP---PPSDPPQELPKDVAEEKSVIPPPPEHKTDDSKALVLVEK-VP 60
           MAEE K     +ESP    P+  P   P +VA+EK   PPP E     SKAL +VEK + 
Sbjct: 1   MAEEQKTSKVDVESPAVLAPAKEPTPAPVEVADEKIHNPPPVE-----SKALAVVEKPIE 60

Query: 61  EVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQK 120
           E    K + GS +RD +LA +  EK+ S +KAWEESEKSKAEN+A KK+S V AWENS+K
Sbjct: 61  EHTPKKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKK 120

Query: 121 ASVEADLKKIEESLEIKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAK 180
           A+VEA L+KIEE LE KKA+Y EKMKNK+A +HK AEEKRA++EAK+GE+LLKAEE  AK
Sbjct: 121 AAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAK 180

Query: 181 YRATGTAPKKLLGCF 188
           YRATG  PK   GCF
Sbjct: 181 YRATGVVPKATCGCF 190

The following BLAST results are available for this feature:

BLAST of Chy4G067260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93788	4.4e-58	70.85	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q9FFA5	6.8e-51	63.00	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
Q9M2D8	6.8e-51	65.38	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
O80837	5.6e-45	58.46	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]
Q7XII4	9.9e-10	34.85	Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1	[more]

BLAST of Chy4G067260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKG1	5.5e-88	97.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G915100 PE=3 SV=1	[more]
A0A1S3CPW1	1.3e-84	93.78	remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=3 SV=1	[more]
A0A6J1GJE1	3.8e-73	81.50	remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111454820 PE=3 SV=1	[more]
A0A6J1DYY5	1.1e-72	83.94	remorin-like OS=Momordica charantia OX=3673 GN=LOC111025889 PE=3 SV=1	[more]
A0A6J1I6W2	5.5e-72	82.90	remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111470544 PE=3 SV=1	[more]

BLAST of Chy4G067260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652698.1	1.39e-114	97.35	remorin [Cucumis sativus] >KGN60481.1 hypothetical protein Csa_002244 [Cucumis s...	[more]
XP_008465865.1	4.19e-110	93.78	PREDICTED: remorin [Cucumis melo]	[more]
XP_038888841.1	1.60e-97	86.00	LOW QUALITY PROTEIN: remorin-like [Benincasa hispida]	[more]
XP_022952053.1	4.37e-95	81.50	remorin-like [Cucurbita moschata]	[more]
KAG7011502.1	1.25e-94	81.00	hypothetical protein SDJN02_26408 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Chy4G067260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61260.1	4.8e-52	65.38	Remorin family protein	[more]
AT5G23750.1	4.8e-52	63.00	Remorin family protein	[more]
AT5G23750.2	8.2e-52	64.00	Remorin family protein	[more]
AT3G48940.1	2.2e-49	67.26	Remorin family protein	[more]
AT2G45820.1	3.9e-46	58.46	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 112..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 4..188
None	No IPR available	PANTHER	PTHR31775:SF5	REMORIN 1.4	coord: 4..188
IPR005518	Remorin, N-terminal	PFAM	PF03766	Remorin_N	coord: 22..73 e-value: 1.1E-22 score: 79.8
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 77..182 e-value: 9.2E-32 score: 109.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G067260.1	Chy4G067260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress