Chy3G067060 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G067060
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	axial regulator YABBY 4-like
Location	chrH03: 18753134 .. 18754494 (+)
RNA-Seq Expression	Chy3G067060
Synteny	Chy3G067060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACAGTGGAGCAGCTCCTTGCCGATTCCTCTGAACAGATTCGCTATGTGCAATGTGGTCTTTGTAGCACCATATTATTGGTACGTACGTAATTAAGATCATATCATATAATTAAAACAGCAAGCCTTATTAAGTAGTAATTAAATTAGTGAGAATATATATGTGTGTGTGTGTGTGTGTATGTATTATTATTATATGGTTTTGTTTGATGATGATTTTAATTTATAACTCAGATATCTTCAAGTAGTGTTAAGTATTATTCTATACGCACAGGTAAATGTTCCATACAGCAACTTGTCGATGGTGGTGAGTGTAAGATGCGGAAACTGTGCTGGTCTTCTCTCTGTCAACATGGCTAAGCCCTCTTTTATCCCTTTTGATCTTCTCACCTCCCTCTCTCATAACTTGGTATCTATACCTATTTTTCTCTTTTTTCTCTCTTAACATTTCTAGTTTTGAAATCACACTGTCAGCAGTACATGAACTGATCCTAACAAGAAATTATTATTACAAAATGTTCTTTTTTTTTTTATTATTATTATTATTTTTTGGTCAGCCAAAGGAGGGTTTTGGTCAAGAGTTTAACGTCCAGAAACACTACTGCTTGGACAGCCTCAGCAACTCATCATCGTCGTCCGACCTCCTAACCTCGTACCATAACATTATTCAAAATCATGAAGATGATGACGTCATCATTATTCCACCCACTCCAGTTGTTAACAAGCGTAATCTGGCCCTTTCATGATGTCTATAAATTTCTTTTTTTCATATTATTGTATATGTGAGATTTCTTTTTTAAAATTTTCTAATATATTGTCTGTGAAAATTAGCCCCGGAGAAGAAACAGCGAGCCCCATCAGCTTATAACCAATTCATCAAGTAAGATATATATTTATAATTAATTAAACTTCATATTCAAATTACGTAAGAGAGAGAGAGAGAGTTTAAGAAAGGGTGTGAATTGGGGTTTCACATGCAAATCATTATAATTTGTATTAAAATTTACAAATTAAAAAATATATATATGTATATATGCAGGGAAGAGATTCGGAGGCTGAAGGCAGAGAATCCAGCGATGGCTCATAAAGAAGCATTCAAGACAGCTGCAAAAAATGTAAGCTTTATGTGTGTTACGTCGTTGGATTCATGATGACATTGATGAGAGAGAGAGAGAGAGAGAGAGTTTTGGTTATATATTATTATTACATTTAAGCGTAAGTTAGTTTTGATGTATAATATTAAGGAAAGAAATTATATGATTGTTATTGGTGTTGGGGAGGTGCAGTGGGCTCATCTTCCGCCAGTCAATGCCGAAGGAGCTGATCATATGATGCTGAGAAAGAAAAACGTAATGTAG

mRNA sequence

ATGTCGACAGTGGAGCAGCTCCTTGCCGATTCCTCTGAACAGATTCGCTATGTGCAATGTGGTCTTTGTAGCACCATATTATTGGTAAATGTTCCATACAGCAACTTGTCGATGGTGGTGAGTGTAAGATGCGGAAACTGTGCTGGTCTTCTCTCTGTCAACATGGCTAAGCCCTCTTTTATCCCTTTTGATCTTCTCACCTCCCTCTCTCATAACTTGCCAAAGGAGGGTTTTGGTCAAGAGTTTAACGTCCAGAAACACTACTGCTTGGACAGCCTCAGCAACTCATCATCGTCGTCCGACCTCCTAACCTCGTACCATAACATTATTCAAAATCATGAAGATGATGACGTCATCATTATTCCACCCACTCCAGTTGTTAACAAGCCCCCGGAGAAGAAACAGCGAGCCCCATCAGCTTATAACCAATTCATCAAGGAAGAGATTCGGAGGCTGAAGGCAGAGAATCCAGCGATGGCTCATAAAGAAGCATTCAAGACAGCTGCAAAAAATTGGGCTCATCTTCCGCCAGTCAATGCCGAAGGAGCTGATCATATGATGCTGAGAAAGAAAAACGTAATGTAG

Coding sequence (CDS)

ATGTCGACAGTGGAGCAGCTCCTTGCCGATTCCTCTGAACAGATTCGCTATGTGCAATGTGGTCTTTGTAGCACCATATTATTGGTAAATGTTCCATACAGCAACTTGTCGATGGTGGTGAGTGTAAGATGCGGAAACTGTGCTGGTCTTCTCTCTGTCAACATGGCTAAGCCCTCTTTTATCCCTTTTGATCTTCTCACCTCCCTCTCTCATAACTTGCCAAAGGAGGGTTTTGGTCAAGAGTTTAACGTCCAGAAACACTACTGCTTGGACAGCCTCAGCAACTCATCATCGTCGTCCGACCTCCTAACCTCGTACCATAACATTATTCAAAATCATGAAGATGATGACGTCATCATTATTCCACCCACTCCAGTTGTTAACAAGCCCCCGGAGAAGAAACAGCGAGCCCCATCAGCTTATAACCAATTCATCAAGGAAGAGATTCGGAGGCTGAAGGCAGAGAATCCAGCGATGGCTCATAAAGAAGCATTCAAGACAGCTGCAAAAAATTGGGCTCATCTTCCGCCAGTCAATGCCGAAGGAGCTGATCATATGATGCTGAGAAAGAAAAACGTAATGTAG

Protein sequence

MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSFIPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNAEGADHMMLRKKNVM*

Homology

[Close]

BLAST of Chy3G067060 vs. ExPASy Swiss-Prot
Match: Q9LDT3 (Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 2.0e-42
Identity = 101/185 (54.59%), Postives = 125/185 (67.57%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60
           M+T    L D   QI +VQCG C+TILLV+VP+++LSMVV+VRCG+C  LLSVN+ K SF
Sbjct: 7   MTTTLNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASF 66

Query: 61  IPFDLLTSLSH--NLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDV 120
           IP  LL SLSH     KE       V++     +    +S + L++S  N     ED+DV
Sbjct: 67  IPLHLLASLSHLDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDN-----EDEDV 126

Query: 121 IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV 180
             +    VVNKPPEK+QRAPSAYN FIKEEIRRLKA+NP+MAHKEAF  AAKNWAH PP 
Sbjct: 127 SRV--YQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPA 184

Query: 181 NAEGA 184
           + + A
Sbjct: 187 HNKRA 184

[Close]

BLAST of Chy3G067060 vs. ExPASy Swiss-Prot
Match: O22152 (Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.5e-29
Identity = 74/171 (43.27%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 12  SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAK---PSFIPFDLLTS 71
           S+ + YVQC  C TIL VNVPY++L   V+VRCG C  LLSVNM     P+     L   
Sbjct: 22  SDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQLG 81

Query: 72  LSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVIIIPPTPVVN 131
                  +   +E           + N   + + + S+ ++ Q HE      IP  P VN
Sbjct: 82  PHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHE------IPKAPPVN 141

Query: 132 KPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVN 180
           +PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF  AAKNWAH P ++
Sbjct: 142 RPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIH 186

[Close]

BLAST of Chy3G067060 vs. ExPASy Swiss-Prot
Match: Q2QM17 (Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.7e-28
Identity = 76/176 (43.18%), Postives = 103/176 (58.52%), Query Frame = 0


Query: 12  SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSFIPFDLLTSLSH 71
           +EQ+ YV C  C+TIL V+VP +++  +V+VRCG+C  LLSVN+         L     H
Sbjct: 8   AEQVCYVHCNFCNTILAVSVPGNSMLNIVTVRCGHCTNLLSVNLRGLMHSAPALQDHHHH 67

Query: 72  NLPKEGFGQEFNVQKHYCLDSLSNSSSSSDL--------LTSYHNIIQNHEDDDVIIIPP 131
           +L + G    F  Q  Y     S +SSSS L        + SY    QN + +  +    
Sbjct: 68  HLQESGLSGCFRDQSGYPEFGFSAASSSSKLRLPPAAAAMVSYSQ--QNQQLEQALHA-- 127

Query: 132 TPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVN 180
                +PPEK+QR PSAYN+FIKEEIRR+KA NP ++H+EAF TAAKNWAH P ++
Sbjct: 128 -----RPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIH 174

[Close]

BLAST of Chy3G067060 vs. ExPASy Swiss-Prot
Match: Q9XFB1 (Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.1e-27
Identity = 75/198 (37.88%), Postives = 115/198 (58.08%), Query Frame = 0


Query: 11  SSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSFIPFDLLTSLS 70
           S++Q+ YV C  C T+L V+VP S+L   V+VRCG+C+ LLSV ++  + +    +++L 
Sbjct: 21  STDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALL-LPSVSNLG 80

Query: 71  H------------NLPKE--GFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDD 130
           H            NL +E    GQ  N+       + ++  +   ++ + +    +H  +
Sbjct: 81  HSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQE 140

Query: 131 DVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLP 190
               +P  P  N+PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF  AAKNWAH P
Sbjct: 141 ----MPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFP 200

Query: 191 PVN-AEGADHMMLRKKNV 194
            ++    ADH   +K NV
Sbjct: 201 HIHFGLMADHPPTKKANV 213

[Close]

BLAST of Chy3G067060 vs. ExPASy Swiss-Prot
Match: Q8L556 (Protein YABBY 3 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB3 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.1e-27
Identity = 82/229 (35.81%), Postives = 118/229 (51.53%), Query Frame = 0


Query: 9   ADS-SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSFIPFDLLT 68
           ADS  EQ+ YV C  C T+L+V+VP S+L   V+VRCG+C+ LL+VNM +   +P     
Sbjct: 53  ADSEQEQLCYVHCHYCDTVLVVSVPSSSLFETVTVRCGHCSSLLTVNM-RGLLLPTTAAA 112

Query: 69  S--------LSHNLPKEGFGQEFNV------QKHYCLDSLSNSSSSSDLLTSYHNI---- 128
           +             P   F    N+        H  LD +S ++S + LL   H +    
Sbjct: 113 APPPPPPPPPPPPPPAAHFPHSLNLAPANPPHHHSLLDEISTANSPTQLLLEQHGLGGLM 172

Query: 129 -----IQNHEDDDVIIIPPTP------------------VVNKPPEKKQRAPSAYNQFIK 188
                 +N+        PP P                  V+N+PPEK+QR PSAYN+FIK
Sbjct: 173 ASAASCRNNNSPAAAAAPPPPTSQGKAAAKEPSPRTNTAVINRPPEKRQRVPSAYNRFIK 232

Query: 189 EEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVN-AEGADHMMLRKKNVM 195
           +EI+R+KA NP ++H+EAF  AAKNWAH P ++     DH  L+K +++
Sbjct: 233 DEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKKTSLL 280

[Close]

BLAST of Chy3G067060 vs. ExPASy TrEMBL
Match: A0A0A0LK60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348870 PE=3 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.9e-104
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60
           MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF
Sbjct: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60

Query: 61  IPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVII 120
           IPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVII
Sbjct: 61  IPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVII 120

Query: 121 IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA 180
           IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA
Sbjct: 121 IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA 180

Query: 181 EGADHMMLRKKNVM 195
           EGADHMMLRKKNVM
Sbjct: 181 EGADHMMLRKKNVM 194

[Close]

BLAST of Chy3G067060 vs. ExPASy TrEMBL
Match: A0A5A7V5T8 (Axial regulator YABBY 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002190 PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.3e-104
Identity = 193/194 (99.48%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60
           MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF
Sbjct: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60

Query: 61  IPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVII 120
           IPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSN+SSSSDLLTSYHNIIQNHEDDDVII
Sbjct: 61  IPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNTSSSSDLLTSYHNIIQNHEDDDVII 120

Query: 121 IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA 180
           IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA
Sbjct: 121 IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA 180

Query: 181 EGADHMMLRKKNVM 195
           EGADHMMLRKKNVM
Sbjct: 181 EGADHMMLRKKNVM 194

[Close]

BLAST of Chy3G067060 vs. ExPASy TrEMBL
Match: A0A6J1KC10 (axial regulator YABBY 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492500 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 4.2e-83
Identity = 165/187 (88.24%), Postives = 171/187 (91.44%), Query Frame = 0


Query: 2   STVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSFI 61
           ST+EQLL D SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC GLLSVNMAKPSFI
Sbjct: 3   STLEQLLPDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFI 62

Query: 62  PFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHE--DDDVI 121
           PFDLLTSLSHNLPKE F Q+ NVQKH CLD+L+N   +SDLLTSYHNIIQNHE  DDD I
Sbjct: 63  PFDLLTSLSHNLPKEPF-QDLNVQKHLCLDNLNN---TSDLLTSYHNIIQNHEDDDDDAI 122

Query: 122 IIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVN 181
           IIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFKTAAKNWAHLPPVN
Sbjct: 123 IIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAFKTAAKNWAHLPPVN 182

Query: 182 AEGADHM 187
            EG DH+
Sbjct: 183 GEG-DHV 184

[Close]

BLAST of Chy3G067060 vs. ExPASy TrEMBL
Match: A0A6J1HCV6 (axial regulator YABBY 4-like OS=Cucurbita moschata OX=3662 GN=LOC111462354 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.0e-81
Identity = 163/188 (86.70%), Postives = 169/188 (89.89%), Query Frame = 0


Query: 2   STVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSFI 61
           ST+E LL D SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC GLLSVNMAKPSFI
Sbjct: 3   STLEHLLPDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFI 62

Query: 62  PFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHE---DDDV 121
           PFDLLTSLSHNLPKE F Q+ NVQKH CLD   N +++SDLLTSYHNIIQNHE   DDD 
Sbjct: 63  PFDLLTSLSHNLPKEPF-QDLNVQKHLCLD---NRNNASDLLTSYHNIIQNHEDDDDDDA 122

Query: 122 IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV 181
           IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFKTAAKNWAHLPPV
Sbjct: 123 IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAFKTAAKNWAHLPPV 182

Query: 182 NAEGADHM 187
           N EG DH+
Sbjct: 183 NGEG-DHV 185

[Close]

BLAST of Chy3G067060 vs. ExPASy TrEMBL
Match: A0A6J1BTL6 (axial regulator YABBY 4-like OS=Momordica charantia OX=3673 GN=LOC111005217 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.7e-72
Identity = 154/197 (78.17%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60
           MSTVE LL DSSE+IRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC GLLSVNMA PSF
Sbjct: 1   MSTVEDLL-DSSEEIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAMPSF 60

Query: 61  IPFDLLTSLSHNLPKE-GFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDD-DV 120
           IPFDLLTSLSHNLPK+  FGQ+F++           ++ +SDL+ S HNIIQ+HEDD D+
Sbjct: 61  IPFDLLTSLSHNLPKQLAFGQDFDL-----------NNVTSDLIASNHNIIQDHEDDPDL 120

Query: 121 II-IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPP 180
           II IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPP
Sbjct: 121 IINIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPP 180

Query: 181 VNAEGADHMMLRKKNVM 195
            + E  D M  RKK V+
Sbjct: 181 AHGEEGDQM--RKKIVV 183

[Close]

BLAST of Chy3G067060 vs. NCBI nr
Match: XP_004143066.2 (axial regulator YABBY 4 [Cucumis sativus])

HSP 1 Score: 389 bits (998), Expect = 3.20e-136
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60
           MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF
Sbjct: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60

Query: 61  IPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVII 120
           IPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVII
Sbjct: 61  IPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVII 120

Query: 121 IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA 180
           IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA
Sbjct: 121 IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA 180

Query: 181 EGADHMMLRKKNVM 194
           EGADHMMLRKKNVM
Sbjct: 181 EGADHMMLRKKNVM 194

[Close]

BLAST of Chy3G067060 vs. NCBI nr
Match: KAA0061079.1 (axial regulator YABBY 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 387 bits (995), Expect = 9.16e-136
Identity = 193/194 (99.48%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60
           MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF
Sbjct: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60

Query: 61  IPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVII 120
           IPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSN+SSSSDLLTSYHNIIQNHEDDDVII
Sbjct: 61  IPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNTSSSSDLLTSYHNIIQNHEDDDVII 120

Query: 121 IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA 180
           IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA
Sbjct: 121 IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA 180

Query: 181 EGADHMMLRKKNVM 194
           EGADHMMLRKKNVM
Sbjct: 181 EGADHMMLRKKNVM 194

[Close]

BLAST of Chy3G067060 vs. NCBI nr
Match: KAE8652041.1 (hypothetical protein Csa_018647 [Cucumis sativus])

HSP 1 Score: 389 bits (998), Expect = 8.33e-134
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60
           MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF
Sbjct: 159 MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 218

Query: 61  IPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVII 120
           IPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVII
Sbjct: 219 IPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVII 278

Query: 121 IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA 180
           IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA
Sbjct: 279 IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA 338

Query: 181 EGADHMMLRKKNVM 194
           EGADHMMLRKKNVM
Sbjct: 339 EGADHMMLRKKNVM 352

[Close]

BLAST of Chy3G067060 vs. NCBI nr
Match: XP_038886536.1 (axial regulator YABBY 4-like [Benincasa hispida])

HSP 1 Score: 346 bits (888), Expect = 1.89e-119
Identity = 177/197 (89.85%), Postives = 185/197 (93.91%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60
           MSTVEQL  DSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC GLLSVNMAKP+F
Sbjct: 1   MSTVEQLQGDSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPTF 60

Query: 61  IPFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVII 120
           IPFDLLTSLSHNLPKEG GQEFN+QKHYCLDSLSN+S   DL+TSYHNIIQNHEDDDV I
Sbjct: 61  IPFDLLTSLSHNLPKEGLGQEFNLQKHYCLDSLSNTS---DLVTSYHNIIQNHEDDDVSI 120

Query: 121 IPPT-PVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVN 180
           IPPT PVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVN
Sbjct: 121 IPPTTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVN 180

Query: 181 AEG--ADHMMLRKKNVM 194
           A+G  A +MM+RK+NVM
Sbjct: 181 AQGQGAGYMMMRKRNVM 194

[Close]

BLAST of Chy3G067060 vs. NCBI nr
Match: XP_022997624.1 (axial regulator YABBY 4-like [Cucurbita maxima] >XP_023545650.1 axial regulator YABBY 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318 bits (814), Expect = 3.83e-108
Identity = 165/187 (88.24%), Postives = 171/187 (91.44%), Query Frame = 0


Query: 2   STVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSFI 61
           ST+EQLL D SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC GLLSVNMAKPSFI
Sbjct: 3   STLEQLLPDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFI 62

Query: 62  PFDLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDD--VI 121
           PFDLLTSLSHNLPKE F Q+ NVQKH CLD+L+N+S   DLLTSYHNIIQNHEDDD   I
Sbjct: 63  PFDLLTSLSHNLPKEPF-QDLNVQKHLCLDNLNNTS---DLLTSYHNIIQNHEDDDDDAI 122

Query: 122 IIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVN 181
           IIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFKTAAKNWAHLPPVN
Sbjct: 123 IIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAFKTAAKNWAHLPPVN 182

Query: 182 AEGADHM 186
            EG DH+
Sbjct: 183 GEG-DHV 184

[Close]

BLAST of Chy3G067060 vs. TAIR 10
Match: AT1G23420.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 173.7 bits (439), Expect = 1.4e-43
Identity = 101/185 (54.59%), Postives = 125/185 (67.57%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60
           M+T    L D   QI +VQCG C+TILLV+VP+++LSMVV+VRCG+C  LLSVN+ K SF
Sbjct: 7   MTTTLNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASF 66

Query: 61  IPFDLLTSLSH--NLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDV 120
           IP  LL SLSH     KE       V++     +    +S + L++S  N     ED+DV
Sbjct: 67  IPLHLLASLSHLDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDN-----EDEDV 126

Query: 121 IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV 180
             +    VVNKPPEK+QRAPSAYN FIKEEIRRLKA+NP+MAHKEAF  AAKNWAH PP 
Sbjct: 127 SRV--YQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPA 184

Query: 181 NAEGA 184
           + + A
Sbjct: 187 HNKRA 184

[Close]

BLAST of Chy3G067060 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30
Identity = 74/171 (43.27%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 12  SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAK---PSFIPFDLLTS 71
           S+ + YVQC  C TIL VNVPY++L   V+VRCG C  LLSVNM     P+     L   
Sbjct: 22  SDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQLG 81

Query: 72  LSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVIIIPPTPVVN 131
                  +   +E           + N   + + + S+ ++ Q HE      IP  P VN
Sbjct: 82  PHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHE------IPKAPPVN 141

Query: 132 KPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVN 180
           +PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF  AAKNWAH P ++
Sbjct: 142 RPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIH 186

[Close]

BLAST of Chy3G067060 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 122.9 bits (307), Expect = 2.9e-28
Identity = 75/198 (37.88%), Postives = 115/198 (58.08%), Query Frame = 0


Query: 11  SSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSFIPFDLLTSLS 70
           S++Q+ YV C  C T+L V+VP S+L   V+VRCG+C+ LLSV ++  + +    +++L 
Sbjct: 21  STDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALL-LPSVSNLG 80

Query: 71  H------------NLPKE--GFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDD 130
           H            NL +E    GQ  N+       + ++  +   ++ + +    +H  +
Sbjct: 81  HSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQE 140

Query: 131 DVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLP 190
               +P  P  N+PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF  AAKNWAH P
Sbjct: 141 ----MPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFP 200

Query: 191 PVN-AEGADHMMLRKKNV 194
            ++    ADH   +K NV
Sbjct: 201 HIHFGLMADHPPTKKANV 213

[Close]

BLAST of Chy3G067060 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 121.7 bits (304), Expect = 6.5e-28
Identity = 71/169 (42.01%), Postives = 96/169 (56.80%), Query Frame = 0


Query: 11  SSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSFIPFDLLTSLS 70
           ++EQ+ Y+ C  C+ IL VNVP S+L  +V+VRCG+C  L SVNMA           +  
Sbjct: 7   ATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMA-----------AAL 66

Query: 71  HNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVIIIPPTPVVNKP 130
            +L +  F         Y   S S++   S + T                I    +VN+P
Sbjct: 67  QSLSRPNFQATNYAVPEYGSSSRSHTKIPSRISTR--------------TITEQRIVNRP 126

Query: 131 PEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVN 180
           PEK+QR PSAYNQFIKEEI+R+KA NP ++H+EAF TAAKNWAH P ++
Sbjct: 127 PEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIH 150

[Close]

BLAST of Chy3G067060 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 121.7 bits (304), Expect = 6.5e-28
Identity = 71/169 (42.01%), Postives = 96/169 (56.80%), Query Frame = 0


Query: 11  SSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSFIPFDLLTSLS 70
           ++EQ+ Y+ C  C+ IL VNVP S+L  +V+VRCG+C  L SVNMA           +  
Sbjct: 7   ATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMA-----------AAL 66

Query: 71  HNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVIIIPPTPVVNKP 130
            +L +  F         Y   S S++   S + T                I    +VN+P
Sbjct: 67  QSLSRPNFQATNYAVPEYGSSSRSHTKIPSRISTR--------------TITEQRIVNRP 126

Query: 131 PEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVN 180
           PEK+QR PSAYNQFIKEEI+R+KA NP ++H+EAF TAAKNWAH P ++
Sbjct: 127 PEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIH 150

The following BLAST results are available for this feature:

BLAST of Chy3G067060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDT3	2.0e-42	54.59	Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2	[more]
O22152	1.5e-29	43.27	Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1	[more]
Q2QM17	3.7e-28	43.18	Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1	[more]
Q9XFB1	4.1e-27	37.88	Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1	[more]
Q8L556	4.1e-27	35.81	Protein YABBY 3 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB3 PE=2 SV=1	[more]

BLAST of Chy3G067060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK60	1.9e-104	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348870 PE=3 SV=1	[more]
A0A5A7V5T8	4.3e-104	99.48	Axial regulator YABBY 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A6J1KC10	4.2e-83	88.24	axial regulator YABBY 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492500 PE=3 SV...	[more]
A0A6J1HCV6	1.0e-81	86.70	axial regulator YABBY 4-like OS=Cucurbita moschata OX=3662 GN=LOC111462354 PE=3 ...	[more]
A0A6J1BTL6	5.7e-72	78.17	axial regulator YABBY 4-like OS=Momordica charantia OX=3673 GN=LOC111005217 PE=3...	[more]

BLAST of Chy3G067060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143066.2	3.20e-136	100.00	axial regulator YABBY 4 [Cucumis sativus]	[more]
KAA0061079.1	9.16e-136	99.48	axial regulator YABBY 4 isoform X2 [Cucumis melo var. makuwa]	[more]
KAE8652041.1	8.33e-134	100.00	hypothetical protein Csa_018647 [Cucumis sativus]	[more]
XP_038886536.1	1.89e-119	89.85	axial regulator YABBY 4-like [Benincasa hispida]	[more]
XP_022997624.1	3.83e-108	88.24	axial regulator YABBY 4-like [Cucurbita maxima] >XP_023545650.1 axial regulator ...	[more]

BLAST of Chy3G067060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23420.1	1.4e-43	54.59	Plant-specific transcription factor YABBY family protein	[more]
AT2G45190.1	1.1e-30	43.27	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.1	2.9e-28	37.88	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	6.5e-28	42.01	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	6.5e-28	42.01	plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 125..186 e-value: 1.8E-8 score: 36.5
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 125..177
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 11..179 e-value: 5.3E-55 score: 186.5
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 1..184
None	No IPR available	PANTHER	PTHR31675:SF8	AXIAL REGULATOR YABBY 4	coord: 1..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G067060.1	Chy3G067060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045165	cell fate commitment
biological_process	GO:0048481	plant ovule development
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:0007275	multicellular organism development
cellular_component	GO:0005634	nucleus