Chy3G066230 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G066230
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH03: 18289774 .. 18291961 (+)
RNA-Seq Expression	Chy3G066230
Synteny	Chy3G066230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTTGAGATTCCATTTGAGAGATAGAGAGAGAGAGAGAGATGGTGAGGAAATGCTCACACTGTGGGAATGTGGGTCACAATTCAAGAACTTGCACCATTCAAAAGCATAAAGAAACCAAGTTTAAGTTATTTGGAGTTCAACTCATTGATAATGGAACAACAACTCATCGTCGTCGTCATCATCATCATACCACCTTGTTGAAGAAGAGTATTAGTTTGGATTCTTTGCCTTCTTCTTCTTCTTCGGCTTCTTCATCTTTATCGTCCTCTTCTTCTTCTGAGAAATTGTCAAATGGATATCTCTCAGATGGCCTCGTCGCCAAAACCCATGAAAGAAAAAAAGGTAAATTTTCTTGTACTGTACTGAATCATTCATCATAAATTCAAAAGCTTCTAAACAAAAACATGGTTTTATATCATTTCATCTTTTCTCTCGATATTTTTTACAAAATTTTAAGCTAATATACAAAGTGTATATTAACTAGCTGATTATATAATTAAAATTTTCGTCATCCACCAACTTACTAGCTCGGATTGTTTTGGTGATTTGAATAGGTGTACCATGGAGTGAAGAGGAGCATAAGGTGTTTCTAGTTGGGTTAGAAAAACTTGGAAAAGGAGATTGGAGAGGAATTTCGAGGAAATTTGTGACGACAAGAACTCCAACTCAAGTGGCTAGTCATGCACAAAAATACTTTCTACGACTCACAACTCTTAACAAAAGAAAACAGCGTCGCCCCAGCCTTTTCGACGTAAACTTCCCCTCTCAAAACTCTCTAATTTTTCACATATTTTAATTACTTTATTTCTGTTTTTTCTCTTTTCTACAATATTTTGATGATGTGCCAATTGCCAGATTGAATTTTGAAGGATAACCCAATTTTCTAAGTAAGTGAATATTCCTATAAACAATATATATATATATATATATATATATATAAGACAAAGCCAATATTGTAAATATAAACTTAAATTTAATTAGTTCGTCACTAATGTTTTATATTCCACTTCCAATATAAATAATAATACACACTATTCTATTACTTTTAAATAACCCATTTGCATACGTATAAGACTTTCCTTTTTTATTGACTAGTCATTAATTAAACAAATATAATACTCAATGATAATAAATATATACAAGAAGGAAGATGTAGTTTAACAACTAATTGTTTAATATAAATACCAGTTTGTATCTATATAATATAGAATAATACTAAACTAAAACTCACTAAAGTAAAATATAATTCAATATTAATTAGAATTTAAGTTTGATAAAACTTTTTCTATATAATTTGATAAAATCCTAAAAACTGAATTATAATTATAAACCAGAAATTAAATTCTAAGGTTCTCCAATAACCAAATAATAAACTGAAAAGCTAATTGAGTTGTTTTTTTCAATATAGTCCTTTAATTGTTGTGTATTTTAGAATGATTCCTTTTTGTAGGGTTGGTGTCAAATTCAATGATGATTAGGTTTTGAATATTGGGATTGTAAATGACTTTCACTACTCTATATACTACAAAAGAAAAATGTGTGTTTATGGTTTATTATGAATGACAACAGGGTGCTGCAGCAAGGGACAAATTGACAGTGCAAGTGGTTGAAAAAGGCCGCAGCAGCAGCAGCATCAACAACAATTTGAAACCAACCAATAACAATTATAATATCCAACCAGCTTCATCCAATAATATTTCCTTTGGGAATCCAACTCCAATTCCAAATATTTCAGAATTATCAAATCTCAATTGGTTTGATTATCATTATAATCAAAGTCATCATGAGCCATATTTCAAGTTTCTTCAATCCCCCATCAACAAATCTTCAAGCTTAATTACGATCAACAATTTTCAAACAACAACCAATCATCATCGTCGTCGTCATCATCAACCTGATTTGCAGCTAAGTTTGTCCACTCCAAAGCCAGTACTTGAACAATTAGCTCAGTGAATCACCATGGATTATTATTGTTATATATATATATTAATATTAGTATAGTTTGTACTTTTGAAGTGGAATAACAATGTTCTTTTTTAATATAATGTTTATGTTGGTTATAATTGTATCATCAAAACTCCCTTGTGTCCACAAACAAGTTGGGGTTTATTGATTATCAAGAACAAAATAATTCATAAACAAATTGTTTGAAATGGAAAGATTATTATTATTATTCTATGAAACCC

mRNA sequence

AGTTTGAGATTCCATTTGAGAGATAGAGAGAGAGAGAGAGATGGTGAGGAAATGCTCACACTGTGGGAATGTGGGTCACAATTCAAGAACTTGCACCATTCAAAAGCATAAAGAAACCAAGTTTAAGTTATTTGGAGTTCAACTCATTGATAATGGAACAACAACTCATCGTCGTCGTCATCATCATCATACCACCTTGTTGAAGAAGAGTATTAGTTTGGATTCTTTGCCTTCTTCTTCTTCTTCGGCTTCTTCATCTTTATCGTCCTCTTCTTCTTCTGAGAAATTGTCAAATGGATATCTCTCAGATGGCCTCGTCGCCAAAACCCATGAAAGAAAAAAAGGTGTACCATGGAGTGAAGAGGAGCATAAGGTGTTTCTAGTTGGGTTAGAAAAACTTGGAAAAGGAGATTGGAGAGGAATTTCGAGGAAATTTGTGACGACAAGAACTCCAACTCAAGTGGCTAGTCATGCACAAAAATACTTTCTACGACTCACAACTCTTAACAAAAGAAAACAGCGTCGCCCCAGCCTTTTCGACGGTGCTGCAGCAAGGGACAAATTGACAGTGCAAGTGGTTGAAAAAGGCCGCAGCAGCAGCAGCATCAACAACAATTTGAAACCAACCAATAACAATTATAATATCCAACCAGCTTCATCCAATAATATTTCCTTTGGGAATCCAACTCCAATTCCAAATATTTCAGAATTATCAAATCTCAATTGGTTTGATTATCATTATAATCAAAGTCATCATGAGCCATATTTCAAGTTTCTTCAATCCCCCATCAACAAATCTTCAAGCTTAATTACGATCAACAATTTTCAAACAACAACCAATCATCATCGTCGTCGTCATCATCAACCTGATTTGCAGCTAAGTTTGTCCACTCCAAAGCCAGTACTTGAACAATTAGCTCAGTGAATCACCATGGATTATTATTGTTATATATATATATTAATATTAGTATAGTTTGTACTTTTGAAGTGGAATAACAATGTTCTTTTTTAATATAATGTTTATGTTGGTTATAATTGTATCATCAAAACTCCCTTGTGTCCACAAACAAGTTGGGGTTTATTGATTATCAAGAACAAAATAATTCATAAACAAATTGTTTGAAATGGAAAGATTATTATTATTATTCTATGAAACCC

Coding sequence (CDS)

AGTTTGAGATTCCATTTGAGAGATAGAGAGAGAGAGAGAGATGGTGAGGAAATGCTCACACTGTGGGAATGTGGGTCACAATTCAAGAACTTGCACCATTCAAAAGCATAAAGAAACCAAGTTTAAGTTATTTGGAGTTCAACTCATTGATAATGGAACAACAACTCATCGTCGTCGTCATCATCATCATACCACCTTGTTGAAGAAGAGTATTAGTTTGGATTCTTTGCCTTCTTCTTCTTCTTCGGCTTCTTCATCTTTATCGTCCTCTTCTTCTTCTGAGAAATTGTCAAATGGATATCTCTCAGATGGCCTCGTCGCCAAAACCCATGAAAGAAAAAAAGGTGTACCATGGAGTGAAGAGGAGCATAAGGTGTTTCTAGTTGGGTTAGAAAAACTTGGAAAAGGAGATTGGAGAGGAATTTCGAGGAAATTTGTGACGACAAGAACTCCAACTCAAGTGGCTAGTCATGCACAAAAATACTTTCTACGACTCACAACTCTTAACAAAAGAAAACAGCGTCGCCCCAGCCTTTTCGACGGTGCTGCAGCAAGGGACAAATTGACAGTGCAAGTGGTTGAAAAAGGCCGCAGCAGCAGCAGCATCAACAACAATTTGAAACCAACCAATAACAATTATAATATCCAACCAGCTTCATCCAATAATATTTCCTTTGGGAATCCAACTCCAATTCCAAATATTTCAGAATTATCAAATCTCAATTGGTTTGATTATCATTATAATCAAAGTCATCATGAGCCATATTTCAAGTTTCTTCAATCCCCCATCAACAAATCTTCAAGCTTAATTACGATCAACAATTTTCAAACAACAACCAATCATCATCGTCGTCGTCATCATCAACCTGATTTGCAGCTAAGTTTGTCCACTCCAAAGCCAGTACTTGAACAATTAGCTCAGTGAATCACCATGGATTATTATTGTTATATATATATATTAATATTAGTATAGTTTGTACTTTTGAAGTGGAATAACAATGTTCTTTTTTAATATAATGTTTATGTTGGTTATAATTGTATCATCAAAACTCCCTTGTGTCCACAAACAAGTTGGGGTTTATTGATTATCAAGAACAAAATAATTCATAAACAAATTGTTTGAAATGGAAAGATTATTATTATTATTCTATGAAACCC

Protein sequence

SLRFHLRDRERERDGEEMLTLWECGSQFKNLHHSKA*RNQV*VIWSSTH**WNNNSSSSSSSSYHLVEEEY*FGFFAFFFFFGFFIFIVLFFF*EIVKWISLRWPRRQNP*KKKRCTME*RGA*GVSSWVRKTWKRRLERNFEEICDDKNSNSSG*SCTKILSTTHNS*QKKTASPQPFRRCCSKGQIDSASG*KRPQQQQHQQQFETNQ*QL*YPTSFIQ*YFLWESNSNSKYFRIIKSQLV*LSL*SKSS*AIFQVSSIPHQQIFKLNYDQQFSNNNQSSSSSSSST*FAAKFVHSKAST*TISSVNHHGLLLLYIYINISIVCTFEVE*QCSFLI*CLCWL*LYHQNSLVSTNKLGFIDYQEQNNS*TNCLKWKDYYYYSMKP

Homology

The following BLAST results are available for this feature:

BLAST of Chy3G066230 vs.


Match Name	E-value	Identity	Description

BLAST of Chy3G066230 vs.


Match Name	E-value	Identity	Description

BLAST of Chy3G066230 vs.


Match Name	E-value	Identity	Description

BLAST of Chy3G066230 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G066230.1	Chy3G066230.1	mRNA