Chy3G065820 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G065820
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
Location	chrH03: 17962529 .. 17964318 (+)
RNA-Seq Expression	Chy3G065820
Synteny	Chy3G065820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAACTCCCTGCTGCATAGGTACAATTTTGATCGTTCGAAGCTATCAGCTTTTGTTCATTGTACACGATTGCTCTCTTCCGACTCCTTGGTTGAGTTCAAGCCAGGGGAGATCGGCATAGCGTCCGGCATTCCTGAAGAGCATCTCCATCGTCGGGTATGCCATTTCTAACTGTGAAATTAGTTGCTCTCTGTTTTGTTTTGTTTTACATATATTGGACGAAATTTTATTGAATTCAGGTTCTGTTGTATGCTTGCTTTTGAAGAATCTTAGAGAAAGAGCTAAATACGACAGTCAGATTAGAGTAAAAGCTGTCCTTTCTCAGGAAAACTTTGCCAACTTTGCTGAATGAGTTTCATGGGTGTCTGTGATATCGTATTAAATTAACATGGAATTATATCTCAATTGCAGTAAGAGATTGCGAGGTCTTTCTTTTCTTTTCTTTTTTCTCATGTGTGATTCTCGACCATAGGAGTTTTGTTTGCTTTTGTTGCAGTAAGAGTGTTCCTTCATTATTGGGAGTGTTTAGAAATAGAAAGAGTTGGGAAGTTGAGGGAGAGATAACAACTGATACTGTAATTTCTCTTTCTTGTACTGCAATGCTTTATAATGTCCTTTCCTCACTTCTGATTGGTATTCTAACAAATTAAAATGAAGGAACTGATATTATAATGTTATAATGCTGTTACTGTCAGTATTTGAGTTTATGGAAGAACTGATTGGATTCTCCTTTATGCATTCCAGGTTATAATCTACTCACCTGCTAGAACCGCCACACAACAAGGCTCTGGGAAAGTTGGGAAATGGAAAATTAATTTTCTCTCCACACACAAGTATGATTTCCTCAATTGCAAATCCCGGGCTGACTTCTCTGTTCACTTAATCTTTGTCAGATACCAACAGATAACATATTGTATATTATTTTTGTTTCCATTCCTTGCATTACACATGATTTTACATTAGTTATTTACCATTTTTTTTCCTTACGGCAAATCATTCATCACTTGCTCAATTGGATTTTGGGTTTTGTTCTCATGCCTTTTCAAGATAATTTAAAACTGAAGCAAGTACTAACAAGCAAGCTTGCTGAATATTTGTTCCATTTTCCCATGGCCATTCTAGATGTTGTGGATCAATCGCCCTTTCTTATCTGGCCCCATTTGTTTAGGTGGGAAAATCCCTTGATGGGATGGACATCCACAGGAGACCCTTATGCTAATGTCGGTGATGCAGCCCTTAGTTTTGATAGTGCAGAAGCTGCAATGAGGTTTGCTGAAAAGCATGGCTGGCAATACGAGGTTACACTGAAATTTTCTTATCATTTACAATTGATACAGTTTTTGAGACTTCCTTTTACATAAAGACTGGTACAGAAACCATTTATTTTCTGTAATCTGGTCCCTAACTGTCTTGAGAACTCCTATTGTAGGTTAAGAAGCGCCAGACACCACTTCTTAAGGTAAAGTTATTGTTGATTAATTTCTGAAATCACTCTTTCATGATGCCCCTTTCATCTATTCTCAGCATGTTATTGATAGCCTATAAATAGATTTACAACTGCTTATTTTTTCTGAAAACTGTATTCTTTTCCATTTGTGTTTTGGTCCTCCTTTGTCTTTGGTTCTCCTTTTACGTTGACAGGGCCAGTCAGAGTGATAAGCCATACCCATTTACTCCTACTTGTTTTTTAACTGATTATAGGCTTCTTATTTTTTAATATTGTGCAGCCGAAGTCCTATGCAGACAACTTCAAATGGAAAGGACCCTCGAAAGCTGAGGAAAATTAA

mRNA sequence

ATGGCGAACTCCCTGCTGCATAGGTACAATTTTGATCGTTCGAAGCTATCAGCTTTTGTTCATTGTACACGATTGCTCTCTTCCGACTCCTTGGTTGAGTTCAAGCCAGGGGAGATCGGCATAGCGTCCGGCATTCCTGAAGAGCATCTCCATCGTCGGGTTATAATCTACTCACCTGCTAGAACCGCCACACAACAAGGCTCTGGGAAAGTTGGGAAATGGAAAATTAATTTTCTCTCCACACACAAGTGGGAAAATCCCTTGATGGGATGGACATCCACAGGAGACCCTTATGCTAATGTCGGTGATGCAGCCCTTAGTTTTGATAGTGCAGAAGCTGCAATGAGGTTTGCTGAAAAGCATGGCTGGCAATACGAGGTTAAGAAGCGCCAGACACCACTTCTTAAGCCGAAGTCCTATGCAGACAACTTCAAATGGAAAGGACCCTCGAAAGCTGAGGAAAATTAA

Coding sequence (CDS)

ATGGCGAACTCCCTGCTGCATAGGTACAATTTTGATCGTTCGAAGCTATCAGCTTTTGTTCATTGTACACGATTGCTCTCTTCCGACTCCTTGGTTGAGTTCAAGCCAGGGGAGATCGGCATAGCGTCCGGCATTCCTGAAGAGCATCTCCATCGTCGGGTTATAATCTACTCACCTGCTAGAACCGCCACACAACAAGGCTCTGGGAAAGTTGGGAAATGGAAAATTAATTTTCTCTCCACACACAAGTGGGAAAATCCCTTGATGGGATGGACATCCACAGGAGACCCTTATGCTAATGTCGGTGATGCAGCCCTTAGTTTTGATAGTGCAGAAGCTGCAATGAGGTTTGCTGAAAAGCATGGCTGGCAATACGAGGTTAAGAAGCGCCAGACACCACTTCTTAAGCCGAAGTCCTATGCAGACAACTTCAAATGGAAAGGACCCTCGAAAGCTGAGGAAAATTAA

Protein sequence

MANSLLHRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGIASGIPEEHLHRRVIIYSPARTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEKHGWQYEVKKRQTPLLKPKSYADNFKWKGPSKAEEN*

Homology

[Close]

BLAST of Chy3G065820 vs. ExPASy Swiss-Prot
Match: Q9FJW4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FRO1 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.3e-52
Identity = 98/132 (74.24%), Postives = 112/132 (84.85%), Query Frame = 0


Query: 24  RLLSSDSLVE--FKPGEIGIASGIPEEHLHRRVIIYSPARTATQQGSGKVGKWKINFLST 83
           R  ++D++VE  +K GEIG  SGIPEEHL R+VIIYSPARTATQ GSGK+GKWKINF+ST
Sbjct: 22  RPFATDAVVESDYKRGEIGKVSGIPEEHLSRKVIIYSPARTATQSGSGKLGKWKINFVST 81

Query: 84  HKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEKHGWQYEVKKRQTPLLKPKSYA 143
            KWENPLMGWTSTGDPYANVGD+AL+FDS EAA  FAE+HGW Y+VKK  TPLLK KSY+
Sbjct: 82  LKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPNTPLLKVKSYS 141

Query: 144 DNFKWKGPSKAE 154
           DNFKWKG  + E
Sbjct: 142 DNFKWKGNPQPE 153

[Close]

BLAST of Chy3G065820 vs. ExPASy Swiss-Prot
Match: Q5XIF3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs4 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.2e-25
Identity = 56/125 (44.80%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 23  TRLLSSDSLVEFKPGEIGIASGIPEEHLH-RRVIIYSPARTATQQGSGKVGKWKINFLST 82
           T+L++ D  ++  P      +G+PEEH+  R+V I+ PAR   Q G     KWK+ F + 
Sbjct: 50  TQLITVDEKLDVTP-----LTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTR 109

Query: 83  HKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEKHGWQYEVKKRQTPLLKPKSYA 142
            +WENPLMGW ST DP +N+    L+F + E A+ FAEKHGW Y+V+ R+ P  K KSY 
Sbjct: 110 ERWENPLMGWASTADPLSNM---VLTFSAKEDAVAFAEKHGWSYDVEGRKVPKPKSKSYG 166

Query: 143 DNFKW 147
            NF W
Sbjct: 170 ANFSW 166

[Close]

BLAST of Chy3G065820 vs. ExPASy Swiss-Prot
Match: Q0MQH0 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gorilla gorilla gorilla OX=9595 GN=NDUFS4 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 7.6e-24
Identity = 51/110 (46.36%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 38  EIGIASGIPEEHLH-RRVIIYSPARTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGD 97
           +I   +G+PEEH+  R+V I+ PAR   Q G     KWK+ F +  +WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDAALSFDSAEAAMRFAEKHGWQYEVKKRQTPLLKPKSYADNFKW 147
           P +N+    L+F + E A+ FAEK+GW Y++++R+ P  K KSY  NF W
Sbjct: 120 PLSNM---VLTFSTKEDAVSFAEKNGWSYDIEERKVPKPKSKSYGANFSW 166

[Close]

BLAST of Chy3G065820 vs. ExPASy Swiss-Prot
Match: O43181 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Homo sapiens OX=9606 GN=NDUFS4 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 7.6e-24
Identity = 51/110 (46.36%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 38  EIGIASGIPEEHLH-RRVIIYSPARTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGD 97
           +I   +G+PEEH+  R+V I+ PAR   Q G     KWK+ F +  +WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDAALSFDSAEAAMRFAEKHGWQYEVKKRQTPLLKPKSYADNFKW 147
           P +N+    L+F + E A+ FAEK+GW Y++++R+ P  K KSY  NF W
Sbjct: 120 PLSNM---VLTFSTKEDAVSFAEKNGWSYDIEERKVPKPKSKSYGANFSW 166

[Close]

BLAST of Chy3G065820 vs. ExPASy Swiss-Prot
Match: P0CB95 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Pongo abelii OX=9601 GN=NDUFS4 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.9e-24
Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 38  EIGIASGIPEEHLH-RRVIIYSPARTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGD 97
           +I   +G+PEEH+  R+V I+ PAR   Q G     KWK+ F +  +WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDAALSFDSAEAAMRFAEKHGWQYEVKKRQTPLLKPKSYADNFKW 147
           P +N+    L+F + E A+ FAEK+GW Y+V++R+ P  K KSY  NF W
Sbjct: 120 PLSNM---VLTFRTKEDAVSFAEKNGWSYDVEERKVPKPKSKSYGANFSW 166

[Close]

BLAST of Chy3G065820 vs. ExPASy TrEMBL
Match: A0A0A0LKZ2 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_2G354640 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 4.4e-83
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MANSLLHRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MAN LLHRYNFDRS+LSAFVHCTRLLSSDSLVE KPGEIGIASGIPEEHLHRRVIIYSPA
Sbjct: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPSKAEEN 156
           HGWQYEVKKRQTPLLKPKSYADNFKWKGP +AEEN
Sbjct: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAEEN 155

[Close]

BLAST of Chy3G065820 vs. ExPASy TrEMBL
Match: A0A5A7V0V4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00940 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 4.8e-82
Identity = 148/155 (95.48%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MANSLLHRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MANSLL RYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIG+ASGIPEEHL+RRVIIYSPA
Sbjct: 1   MANSLLRRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGLASGIPEEHLNRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVG+A+L+FDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGEASLTFDSAEAAMRFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPSKAEEN 156
           HGWQYEVKKRQTPLLKPKSYADNFKWKGP KAEEN
Sbjct: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPKAEEN 155

[Close]

BLAST of Chy3G065820 vs. ExPASy TrEMBL
Match: A0A1S3BAL3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103487828 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81
Identity = 146/155 (94.19%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MANSLLHRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MANSLL RYNFDRSKLSAFVHCTRLLSSDSLVEFKPGE+G+ASGIPEEHL+RRVIIYSPA
Sbjct: 1   MANSLLRRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEVGLASGIPEEHLNRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVG+A+L+FDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGEASLTFDSAEAAMRFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPSKAEEN 156
           HGWQYEVKKRQTP+LKPKSYADNFKWKGP KAEEN
Sbjct: 121 HGWQYEVKKRQTPILKPKSYADNFKWKGPPKAEEN 155

[Close]

BLAST of Chy3G065820 vs. ExPASy TrEMBL
Match: A0A6J1BQ75 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111004639 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.1e-73
Identity = 136/154 (88.31%), Postives = 139/154 (90.26%), Query Frame = 0


Query: 1   MANSLLHRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MA+SLL  YN  RS  SAFVH  RLLSSDSLVEFKP EIGI SGIPE HL RR+IIYSPA
Sbjct: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRIIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAM FAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPSKAEE 155
           HGWQYEVKKRQTP+LKPKSYADNFKWKGP K EE
Sbjct: 121 HGWQYEVKKRQTPILKPKSYADNFKWKGPPKTEE 154

[Close]

BLAST of Chy3G065820 vs. ExPASy TrEMBL
Match: A0A6P9F5Z9 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Juglans regia OX=51240 GN=LOC109008146 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 9.5e-62
Identity = 118/151 (78.15%), Postives = 127/151 (84.11%), Query Frame = 0


Query: 1   MANSLLHRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MA+SL    N  R+  SAFV  TR LSS++LVE KP E+G+ SGIPEEHL RRVIIYSPA
Sbjct: 1   MASSLQRSLNIARAYRSAFVPATRSLSSEALVELKPSEVGMVSGIPEEHLRRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVG+WKINFLST KWENPLMGWTSTGDPYANVG+A LSFDS EAA  FAEK
Sbjct: 61  RTATQQGSGKVGRWKINFLSTQKWENPLMGWTSTGDPYANVGEAGLSFDSEEAAKAFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPSK 152
           HGW+Y VKKR TPLLK KSYADNFKWKGP K
Sbjct: 121 HGWEYVVKKRHTPLLKAKSYADNFKWKGPPK 151

[Close]

BLAST of Chy3G065820 vs. NCBI nr
Match: XP_004142898.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucumis sativus] >KGN62438.1 hypothetical protein Csa_018679 [Cucumis sativus])

HSP 1 Score: 316 bits (810), Expect = 7.70e-109
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MANSLLHRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MAN LLHRYNFDRS+LSAFVHCTRLLSSDSLVE KPGEIGIASGIPEEHLHRRVIIYSPA
Sbjct: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPSKAEEN 155
           HGWQYEVKKRQTPLLKPKSYADNFKWKGP +AEEN
Sbjct: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAEEN 155

[Close]

BLAST of Chy3G065820 vs. NCBI nr
Match: KAA0060960.1 (NADH dehydrogenase (ubiquinone) iron-sulfur protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 313 bits (801), Expect = 1.82e-107
Identity = 148/155 (95.48%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MANSLLHRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MANSLL RYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIG+ASGIPEEHL+RRVIIYSPA
Sbjct: 1   MANSLLRRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGLASGIPEEHLNRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVG+A+L+FDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGEASLTFDSAEAAMRFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPSKAEEN 155
           HGWQYEVKKRQTPLLKPKSYADNFKWKGP KAEEN
Sbjct: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPKAEEN 155

[Close]

BLAST of Chy3G065820 vs. NCBI nr
Match: XP_038884729.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 312 bits (799), Expect = 3.67e-107
Identity = 148/155 (95.48%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 1   MANSLLHRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MANSLL RYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIG+ SGIPEEH+ RRVIIYSPA
Sbjct: 1   MANSLLGRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGMVSGIPEEHIRRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPSKAEEN 155
           HGWQYEVKKRQTP+LKPKSYADNFKWKGP KAEEN
Sbjct: 121 HGWQYEVKKRQTPILKPKSYADNFKWKGPPKAEEN 155

[Close]

BLAST of Chy3G065820 vs. NCBI nr
Match: XP_008444538.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 311 bits (798), Expect = 5.21e-107
Identity = 146/155 (94.19%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MANSLLHRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MANSLL RYNFDRSKLSAFVHCTRLLSSDSLVEFKPGE+G+ASGIPEEHL+RRVIIYSPA
Sbjct: 1   MANSLLRRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEVGLASGIPEEHLNRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVG+A+L+FDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGEASLTFDSAEAAMRFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPSKAEEN 155
           HGWQYEVKKRQTP+LKPKSYADNFKWKGP KAEEN
Sbjct: 121 HGWQYEVKKRQTPILKPKSYADNFKWKGPPKAEEN 155

[Close]

BLAST of Chy3G065820 vs. NCBI nr
Match: XP_022131424.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Momordica charantia])

HSP 1 Score: 283 bits (724), Expect = 1.00e-95
Identity = 136/154 (88.31%), Postives = 139/154 (90.26%), Query Frame = 0


Query: 1   MANSLLHRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MA+SLL  YN  RS  SAFVH  RLLSSDSLVEFKP EIGI SGIPE HL RR+IIYSPA
Sbjct: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRIIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAM FAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPSKAEE 154
           HGWQYEVKKRQTP+LKPKSYADNFKWKGP K EE
Sbjct: 121 HGWQYEVKKRQTPILKPKSYADNFKWKGPPKTEE 154

[Close]

BLAST of Chy3G065820 vs. TAIR 10
Match: AT5G67590.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 207.2 bits (526), Expect = 9.4e-54
Identity = 98/132 (74.24%), Postives = 112/132 (84.85%), Query Frame = 0


Query: 24  RLLSSDSLVE--FKPGEIGIASGIPEEHLHRRVIIYSPARTATQQGSGKVGKWKINFLST 83
           R  ++D++VE  +K GEIG  SGIPEEHL R+VIIYSPARTATQ GSGK+GKWKINF+ST
Sbjct: 22  RPFATDAVVESDYKRGEIGKVSGIPEEHLSRKVIIYSPARTATQSGSGKLGKWKINFVST 81

Query: 84  HKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEKHGWQYEVKKRQTPLLKPKSYA 143
            KWENPLMGWTSTGDPYANVGD+AL+FDS EAA  FAE+HGW Y+VKK  TPLLK KSY+
Sbjct: 82  LKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPNTPLLKVKSYS 141

Query: 144 DNFKWKGPSKAE 154
           DNFKWKG  + E
Sbjct: 142 DNFKWKGNPQPE 153

The following BLAST results are available for this feature:

BLAST of Chy3G065820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJW4	1.3e-52	74.24	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidop...	[more]
Q5XIF3	5.2e-25	44.80	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus n...	[more]
Q0MQH0	7.6e-24	46.36	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gorilla ...	[more]
O43181	7.6e-24	46.36	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Homo sap...	[more]
P0CB95	9.9e-24	47.27	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Pongo ab...	[more]

BLAST of Chy3G065820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKZ2	4.4e-83	96.77	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis ...	[more]
A0A5A7V0V4	4.8e-82	95.48	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis ...	[more]
A0A1S3BAL3	1.1e-81	94.19	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis ...	[more]
A0A6J1BQ75	4.1e-73	88.31	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Momordic...	[more]
A0A6P9F5Z9	9.5e-62	78.15	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Juglans ...	[more]

BLAST of Chy3G065820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142898.1	7.70e-109	96.77	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucumis sa...	[more]
KAA0060960.1	1.82e-107	95.48	NADH dehydrogenase (ubiquinone) iron-sulfur protein 4 [Cucumis melo var. makuwa]	[more]
XP_038884729.1	3.67e-107	95.48	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Benin...	[more]
XP_008444538.1	5.21e-107	94.19	PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-...	[more]
XP_022131424.1	1.00e-95	88.31	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Momor...	[more]

BLAST of Chy3G065820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67590.1	9.4e-54	74.24	NADH-ubiquinone oxidoreductase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038532	NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily	GENE3D	3.30.160.190	atu1810 like domain	coord: 52..127 e-value: 5.0E-35 score: 121.3
IPR006885	NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial	PFAM	PF04800	ETC_C1_NDUFA4	coord: 53..147 e-value: 2.6E-34 score: 117.4
IPR006885	NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial	PANTHER	PTHR12219	NADH-UBIQUINONE OXIDOREDUCTASE	coord: 13..154
None	No IPR available	PANTHER	PTHR12219:SF23	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 4, MITOCHONDRIAL-LIKE	coord: 13..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G065820.1	Chy3G065820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respirasome
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H