Chy3G065630 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATAGCTTGCGTCGAAGTTATAGCTGGCTTCTGCTGCCGGTGGTTGCTAATATCAATATAAGCGCCAAAGCTTCTGTATCTCCTAAGATTCAATGGAGGGCGTATTTCAGTTTCGGTTCATCTCCAATGAGATTCACAAGCAGAGGAAGTAAAATTTCTTCCCCATCTTTCTCCACATCTTCTCAGCATCGATTCTCTTCCTCGTCTTCATCGAAACCAGGGATTGGATTTGTTGGATGGTATCTGAGGAAAGTTGACACTCACCCGTTCATCACTAAAGGTATCACTGCTTCGTTGATTTATGCGGCTGCTGACCTAACCTCTCAGGTAAAAAGATGAATTTTATTTTTCTTTTCAGTTCACTTTCGTAATTTTTAGTCGTTTGGGAATTAAATGCAACATTTGAGGTTTCATTTGTCTATCTAAAGAAAGAAATTGAAACCCAATTACAACCATTTCAATGTAGAAGCCAAATGGGTTACTGTTTATGTGCTTGGAATCTTGAGTGGTTGCATGTGTTAATTTGTATAACATTTTAGTACAGCTCAAGTTGCATTCAAACCTGGAGTTTGGTAGATTTTAAAGGATGGGCAGATGTCATTCATGCCCTCATCTGTTCAGCTGATTTATTTTTTAGATGATTTATGTTGAAAATGTAGAATATGATATATCTCATTTGTTGCTCTGTGGTTTGCTGCACGTGTAAATTATGAACAAATCAAAATTTCTTTTAAAGTATACTAGAATGTAGACTTTCTTCTCTAAAAGGATGACACGAGAATGCCTTCTTTTTTGGGCTGTTTGTACTTATGCTTAACCTAATTGATGAGTTTGGTTCATTTGTTCAAATTTTCATCAGTTTTGCAATAAACCCGCCATTGACTTAACAACACCCTTTGAAATTTACATTTCTTATGCCCTCTTGCTCTGGTTAATTTTTTTATTCTAATTGTGTTGTTTACATATAATTTTGTCAGACGATTACATTGTCATCTTCTGGCTCGTTTGACTTAATAAGGACAACACGGATGGCTGCTTACGGATTGTTGATATTGGGGCCATCACAGCATTTGTGGTTTAATTTTATGTCTACAATCTCTCCATCACGAGATTTTTTGTCAACTTTCAGGAAGATTTTCCTGGGACAGGCTGTGTTTGGACCTACTATAACCTCTGTTTTCTTCTCCTATAATGCATCTTTGCAAGGTAATTATAAAGTGAAGTAGTAGAACTATTGATAATCTTCAATGTCTAGTCATAGTTGGCGGGATTTGTTGATCACTACCCTCGCTTCTTCAACTTCATATTAGATGGTTTGAACTTTGATGGAGTGTTCTATTGGATTTTTGGGTGCCCTTCTTTGCACATTTTTAAAGTGTGGATTAAGATAGGCTTTTAACTAAGTTTTAAATACAATTCAGGGCCTTGGTCTTTTGTGCAGAAATTAGAGCGTCTTATTACTATCAATTGGTAGTGCTTTAGCCCCTCTGCGTTACTCAGCTTAAGTAGTATTTGTTACACTTTTCTTACTTTGGTTGGAAACTTTTGATGACTGCCACATGGCTTCATCAAGCTCATAAAATTAATTTTATTGAGAATGAAGTTCTATAATTTTGTGGGGCCCCTTTGAAGAATTAGGGGTAAGTGGGTTATTTATGTTTGGTTCCGTTTTCCTAGAAGTCGGTTTCGGTGCCAATTTTCCATTCTCCTACATGTATATTTGGTTTCTTTGACATTAGATTGAACCAATAGGTCCAACGCCAAGCAGACATATTAGTTGAAGAAATTTTGAAAACTGTTGCAACAACCAGCTTCATGGAAACTGGAACCAACCAAAACCAATCAAAATGAACCGATCGACTTACTTTTATTCAGGATTGAAAATTGGGAAATCAAGCTGACCAAACATGTGTTGCTTGGACGTTGGAAACTGAATATGTTTGGTCTGGTCTTCGTTTTAGTCCTTTTTTTTTCCAACTTCAGCTTTCTCAGCTCATGGAAACATTAATACAATGTGGGCCATGAAGATTTTTTAATTATCTGCTAATTTTGGGTCTTTTTTGTTGAAATCCGTAATCTCCCTGTTGCAGTCATCATTTAGTCCTACTGGCTTTTACAGACTTAGAACCTTCCTTAAAATCAAACCACCATTCTCTCAAAGTATGTTCAGTGGATGATTTATGATTTTTGTCAAATAATCCATGTGGTTCTCATAACCCGTGAACAATATTATTTATAGTTTTGTAACACTATATTATACCACTCGTATTAGGTTCGTGTACAATTCTGAATGCATTATTTCCAAATTCAGGTGAAAGTGGCAGCGAGATTGCTGCTAGATTAAAGCGCGATTTGCTTCCAACATTGTTAAATGGAGTTTTGTTTTGGCCAGTCTGCGATTTTCTCACATATAAATTTATCCCCGTTCATCTACAGGTATGTACTAAGTACTCATTGCATACAGACACAATAAAGGAATCACATATCAGATATGAGATGCTGCACTGAATCTCTGTTATGATCGCTTAACGTCGGTAATTATCTGCTCCTTTTGTAACTATTTGATCTTGAAACATTGATTTTGCAGCCATTGGCCAACAGTTCATTTGCATATATATGGACCATTTATCTGACATACATGGCAAGCTTAAAAGCAGTTGATATCAAGTGA ATGAATAGCTTGCGTCGAAGTTATAGCTGGCTTCTGCTGCCGGTGGTTGCTAATATCAATATAAGCGCCAAAGCTTCTGTATCTCCTAAGATTCAATGGAGGGCGTATTTCAGTTTCGGTTCATCTCCAATGAGATTCACAAGCAGAGGAAGTAAAATTTCTTCCCCATCTTTCTCCACATCTTCTCAGCATCGATTCTCTTCCTCGTCTTCATCGAAACCAGGGATTGGATTTGTTGGATGGTATCTGAGGAAAGTTGACACTCACCCGTTCATCACTAAAGGTATCACTGCTTCGTTGATTTATGCGGCTGCTGACCTAACCTCTCAGACGATTACATTGTCATCTTCTGGCTCGTTTGACTTAATAAGGACAACACGGATGGCTGCTTACGGATTGTTGATATTGGGGCCATCACAGCATTTGTGGTTTAATTTTATGTCTACAATCTCTCCATCACGAGATTTTTTGTCAACTTTCAGGAAGATTTTCCTGGGACAGGCTGTGTTTGGACCTACTATAACCTCTGTTTTCTTCTCCTATAATGCATCTTTGCAAGGTGAAAGTGGCAGCGAGATTGCTGCTAGATTAAAGCGCGATTTGCTTCCAACATTGTTAAATGGAGTTTTGTTTTGGCCAGTCTGCGATTTTCTCACATATAAATTTATCCCCGTTCATCTACAGCCATTGGCCAACAGTTCATTTGCATATATATGGACCATTTATCTGACATACATGGCAAGCTTAAAAGCAGTTGATATCAAGTGA ATGAATAGCTTGCGTCGAAGTTATAGCTGGCTTCTGCTGCCGGTGGTTGCTAATATCAATATAAGCGCCAAAGCTTCTGTATCTCCTAAGATTCAATGGAGGGCGTATTTCAGTTTCGGTTCATCTCCAATGAGATTCACAAGCAGAGGAAGTAAAATTTCTTCCCCATCTTTCTCCACATCTTCTCAGCATCGATTCTCTTCCTCGTCTTCATCGAAACCAGGGATTGGATTTGTTGGATGGTATCTGAGGAAAGTTGACACTCACCCGTTCATCACTAAAGGTATCACTGCTTCGTTGATTTATGCGGCTGCTGACCTAACCTCTCAGACGATTACATTGTCATCTTCTGGCTCGTTTGACTTAATAAGGACAACACGGATGGCTGCTTACGGATTGTTGATATTGGGGCCATCACAGCATTTGTGGTTTAATTTTATGTCTACAATCTCTCCATCACGAGATTTTTTGTCAACTTTCAGGAAGATTTTCCTGGGACAGGCTGTGTTTGGACCTACTATAACCTCTGTTTTCTTCTCCTATAATGCATCTTTGCAAGGTGAAAGTGGCAGCGAGATTGCTGCTAGATTAAAGCGCGATTTGCTTCCAACATTGTTAAATGGAGTTTTGTTTTGGCCAGTCTGCGATTTTCTCACATATAAATTTATCCCCGTTCATCTACAGCCATTGGCCAACAGTTCATTTGCATATATATGGACCATTTATCTGACATACATGGCAAGCTTAAAAGCAGTTGATATCAAGTGA MNSLRRSYSWLLLPVVANINISAKASVSPKIQWRAYFSFGSSPMRFTSRGSKISSPSFSTSSQHRFSSSSSSKPGIGFVGWYLRKVDTHPFITKGITASLIYAAADLTSQTITLSSSGSFDLIRTTRMAAYGLLILGPSQHLWFNFMSTISPSRDFLSTFRKIFLGQAVFGPTITSVFFSYNASLQGESGSEIAARLKRDLLPTLLNGVLFWPVCDFLTYKFIPVHLQPLANSSFAYIWTIYLTYMASLKAVDIK* Homology
BLAST of Chy3G065630 vs. ExPASy Swiss-Prot
Match: Q54FR4 (PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.7e-17 Identity = 45/144 (31.25%), Postives = 75/144 (52.08%), Query Frame = 0
BLAST of Chy3G065630 vs. ExPASy Swiss-Prot
Match: Q66GV0 (Protein Mpv17 OS=Xenopus laevis OX=8355 GN=mpv17 PE=2 SV=2) HSP 1 Score: 80.9 bits (198), Expect = 2.3e-14 Identity = 48/169 (28.40%), Postives = 74/169 (43.79%), Query Frame = 0
BLAST of Chy3G065630 vs. ExPASy Swiss-Prot
Match: Q54GD8 (PXMP2/4 family protein 3 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290223 PE=3 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.2e-13 Identity = 47/171 (27.49%), Postives = 86/171 (50.29%), Query Frame = 0
BLAST of Chy3G065630 vs. ExPASy Swiss-Prot
Match: Q754F0 (Protein SYM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=SYM1 PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.5e-13 Identity = 42/175 (24.00%), Postives = 77/175 (44.00%), Query Frame = 0
BLAST of Chy3G065630 vs. ExPASy Swiss-Prot
Match: Q5BK62 (Protein Mpv17 OS=Rattus norvegicus OX=10116 GN=Mpv17 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.1e-11 Identity = 42/167 (25.15%), Postives = 68/167 (40.72%), Query Frame = 0
BLAST of Chy3G065630 vs. ExPASy TrEMBL
Match: A0A0A0LL22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354840 PE=3 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 2.7e-130 Identity = 244/255 (95.69%), Postives = 247/255 (96.86%), Query Frame = 0
BLAST of Chy3G065630 vs. ExPASy TrEMBL
Match: A0A1S3BA50 (PXMP2/4 family protein 4 OS=Cucumis melo OX=3656 GN=LOC103487845 PE=3 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 1.8e-126 Identity = 238/254 (93.70%), Postives = 242/254 (95.28%), Query Frame = 0
BLAST of Chy3G065630 vs. ExPASy TrEMBL
Match: A0A5A7V0U7 (PXMP2/4 family protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00770 PE=3 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 2.1e-111 Identity = 212/228 (92.98%), Postives = 216/228 (94.74%), Query Frame = 0
BLAST of Chy3G065630 vs. ExPASy TrEMBL
Match: A0A6J1BSL7 (PXMP2/4 family protein 4 OS=Momordica charantia OX=3673 GN=LOC111005169 PE=3 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 1.1e-107 Identity = 209/260 (80.38%), Postives = 222/260 (85.38%), Query Frame = 0
BLAST of Chy3G065630 vs. ExPASy TrEMBL
Match: A0A6J1K760 (PXMP2/4 family protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111492264 PE=3 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 1.8e-105 Identity = 198/255 (77.65%), Postives = 223/255 (87.45%), Query Frame = 0
BLAST of Chy3G065630 vs. NCBI nr
Match: XP_004142887.1 (PXMP2/4 family protein 4 [Cucumis sativus] >KGN62458.1 hypothetical protein Csa_018714 [Cucumis sativus]) HSP 1 Score: 475 bits (1223), Expect = 1.48e-168 Identity = 244/255 (95.69%), Postives = 247/255 (96.86%), Query Frame = 0
BLAST of Chy3G065630 vs. NCBI nr
Match: XP_008444568.1 (PREDICTED: PXMP2/4 family protein 4 [Cucumis melo]) HSP 1 Score: 463 bits (1192), Expect = 9.07e-164 Identity = 238/255 (93.33%), Postives = 242/255 (94.90%), Query Frame = 0
BLAST of Chy3G065630 vs. NCBI nr
Match: XP_038885096.1 (protein SYM1-like [Benincasa hispida]) HSP 1 Score: 426 bits (1094), Expect = 6.98e-149 Identity = 220/256 (85.94%), Postives = 230/256 (89.84%), Query Frame = 0
BLAST of Chy3G065630 vs. NCBI nr
Match: KAA0060944.1 (PXMP2/4 family protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 415 bits (1066), Expect = 2.36e-144 Identity = 212/228 (92.98%), Postives = 216/228 (94.74%), Query Frame = 0
BLAST of Chy3G065630 vs. NCBI nr
Match: XP_022132274.1 (PXMP2/4 family protein 4 [Momordica charantia]) HSP 1 Score: 401 bits (1030), Expect = 5.39e-139 Identity = 209/261 (80.08%), Postives = 222/261 (85.06%), Query Frame = 0
BLAST of Chy3G065630 vs. TAIR 10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 262.3 bits (669), Expect = 4.0e-70 Identity = 128/214 (59.81%), Postives = 161/214 (75.23%), Query Frame = 0
BLAST of Chy3G065630 vs. TAIR 10
Match: AT2G14860.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 253.1 bits (645), Expect = 2.5e-67 Identity = 114/181 (62.98%), Postives = 147/181 (81.22%), Query Frame = 0
BLAST of Chy3G065630 vs. TAIR 10
Match: AT4G33905.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 248.1 bits (632), Expect = 7.9e-66 Identity = 119/204 (58.33%), Postives = 157/204 (76.96%), Query Frame = 0
BLAST of Chy3G065630 vs. TAIR 10
Match: AT5G19750.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 90.5 bits (223), Expect = 2.1e-18 Identity = 48/174 (27.59%), Postives = 88/174 (50.57%), Query Frame = 0
BLAST of Chy3G065630 vs. TAIR 10
Match: AT4G04470.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 69.7 bits (169), Expect = 3.8e-12 Identity = 47/179 (26.26%), Postives = 81/179 (45.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|