Chy3G065310 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G065310
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	transcription factor HEC3-like
Location	chrH03: 17678636 .. 17679599 (-)
RNA-Seq Expression	Chy3G065310
Synteny	Chy3G065310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATTGAGGAGATGGGAAAGTTTGGAGAGAATTTTGAATATAATGAAATTGCAACTAGTTTGGATTTTGGTTTTGGTAGTTCCAATATTACTTCCACTTCACATCCTATTTTTCCTTCTTTTAATAATATCCCACCAACCACTCTTTCTATGAATAACGCCACTCACGCTGTTGCACCGCCGTCTTTTCCGCCCTATTCCGCCGCTGCCCGGTGGAGATCCCATTTTCCAGCCGCCCGAAATTCCGGCATGGTATGTATCATCATATATAACTCTTGTATACTTTGAGTACTTTTTAATCACTTTTGGTGTTGTATAACTAAATAACCTAATATTCCATGGAATGAGGATTGCTTGATTTTTATTTCTTTGTTAAAAATCTTAGAATTTTTAATCAAATTTTAAAAATAAAACATATAGATGTAAGAGTAGTATTTTGTAAAATGAAGGTAGAAATTTAAAAAATAGGAGTGAGGGTTAGTGGCCGATTTATGAAAATGTTTTTAAGAAGGCAGGGGAGGAGGAAGTGGAAGGATCAGAATCAGAATCAATGGGGGGAGGGATGAGAGAGATGATATACAGAATAGCAGCAATGCAGCCAATAGAGATAGACCCAGAAGCAGTGAAGGCACCAAAGCGACGGAATGTTAAGATTTCAAAAGATCCACAGAGCGTAGCGGCACGGCATAGACGAGAGAGAATTAGCGAAAGAATCAGAATTCTTCAAAGAATAGTCCCTGGTGGCACCAAAATGGACACCGCTTCCATGTTAGACGAAGCCATTCATTACCTTAAGTTTTTGAAAAACCAACTCCATTCACTCCAAATCGCCGCCGCCTCCTCCTCCTCCTCCGCCTACGCCTTTCCCACCGTCGCTCATTACAATAATAAACAACAAAACTTGATCCACTTTCCTCAATTGCCAACTCATCCACATCACCACCTGAACCAAGATGCTTGA

mRNA sequence

ATGGATATTGAGGAGATGGGAAAGTTTGGAGAGAATTTTGAATATAATGAAATTGCAACTAGTTTGGATTTTGGTTTTGGTAGTTCCAATATTACTTCCACTTCACATCCTATTTTTCCTTCTTTTAATAATATCCCACCAACCACTCTTTCTATGAATAACGCCACTCACGCTGTTGCACCGCCGTCTTTTCCGCCCTATTCCGCCGCTGCCCGGTGGAGATCCCATTTTCCAGCCGCCCGAAATTCCGGCATGGCAGGGGAGGAGGAAGTGGAAGGATCAGAATCAGAATCAATGGGGGGAGGGATGAGAGAGATGATATACAGAATAGCAGCAATGCAGCCAATAGAGATAGACCCAGAAGCAGTGAAGGCACCAAAGCGACGGAATGTTAAGATTTCAAAAGATCCACAGAGCGTAGCGGCACGGCATAGACGAGAGAGAATTAGCGAAAGAATCAGAATTCTTCAAAGAATAGTCCCTGGTGGCACCAAAATGGACACCGCTTCCATGTTAGACGAAGCCATTCATTACCTTAAGTTTTTGAAAAACCAACTCCATTCACTCCAAATCGCCGCCGCCTCCTCCTCCTCCTCCGCCTACGCCTTTCCCACCGTCGCTCATTACAATAATAAACAACAAAACTTGATCCACTTTCCTCAATTGCCAACTCATCCACATCACCACCTGAACCAAGATGCTTGA

Coding sequence (CDS)

ATGGATATTGAGGAGATGGGAAAGTTTGGAGAGAATTTTGAATATAATGAAATTGCAACTAGTTTGGATTTTGGTTTTGGTAGTTCCAATATTACTTCCACTTCACATCCTATTTTTCCTTCTTTTAATAATATCCCACCAACCACTCTTTCTATGAATAACGCCACTCACGCTGTTGCACCGCCGTCTTTTCCGCCCTATTCCGCCGCTGCCCGGTGGAGATCCCATTTTCCAGCCGCCCGAAATTCCGGCATGGCAGGGGAGGAGGAAGTGGAAGGATCAGAATCAGAATCAATGGGGGGAGGGATGAGAGAGATGATATACAGAATAGCAGCAATGCAGCCAATAGAGATAGACCCAGAAGCAGTGAAGGCACCAAAGCGACGGAATGTTAAGATTTCAAAAGATCCACAGAGCGTAGCGGCACGGCATAGACGAGAGAGAATTAGCGAAAGAATCAGAATTCTTCAAAGAATAGTCCCTGGTGGCACCAAAATGGACACCGCTTCCATGTTAGACGAAGCCATTCATTACCTTAAGTTTTTGAAAAACCAACTCCATTCACTCCAAATCGCCGCCGCCTCCTCCTCCTCCTCCGCCTACGCCTTTCCCACCGTCGCTCATTACAATAATAAACAACAAAACTTGATCCACTTTCCTCAATTGCCAACTCATCCACATCACCACCTGAACCAAGATGCTTGA

Protein sequence

MDIEEMGKFGENFEYNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVAPPSFPPYSAAARWRSHFPAARNSGMAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQIAAASSSSSAYAFPTVAHYNNKQQNLIHFPQLPTHPHHHLNQDA*

Homology

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BLAST of Chy3G065310 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.5e-36
Identity = 77/88 (87.50%), Postives = 83/88 (94.32%), Query Frame = 0


Query: 103 MREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPG 162
           MREMI+RIA MQPI IDPEAVK PKRRNV+ISKDPQSVAARHRRERISERIRILQR+VPG
Sbjct: 98  MREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPG 157

Query: 163 GTKMDTASMLDEAIHYLKFLKNQLHSLQ 191
           GTKMDTASMLDEAIHY+KFLK Q+ SL+
Sbjct: 158 GTKMDTASMLDEAIHYVKFLKKQVQSLE 185

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BLAST of Chy3G065310 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.7e-33
Identity = 92/168 (54.76%), Postives = 110/168 (65.48%), Query Frame = 0


Query: 26  FGSSNITSTSHPIFP-SFNNIPPTTLSMNNATHAVAP--PSFPPYSAAARWRSHFPAARN 85
           F +SN     H I   S +N  P      N TH+  P   + P +     +R     A +
Sbjct: 22  FSNSNPNPNPHNIMMLSESNTHPFFF---NPTHSHLPFDQTMPHHQPGLNFR----YAPS 81

Query: 86  SGMAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAA 145
              +  E+  G    +    MREMI+RIA MQPI IDPE+VK PKR+NV+ISKDPQSVAA
Sbjct: 82  PSSSLPEKRGGCSDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAA 141

Query: 146 RHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQ 191
           RHRRERISERIRILQR+VPGGTKMDTASMLDEAIHY+KFLK Q+ SL+
Sbjct: 142 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182

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BLAST of Chy3G065310 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-32
Identity = 93/186 (50.00%), Postives = 119/186 (63.98%), Query Frame = 0


Query: 11  ENFEYNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVAPPSFPPYSAA 70
           +N+ +N I         SSN  + +       NN  P  ++M+  T       F P+S+ 
Sbjct: 12  QNYTWNNI-------INSSNNNNKNDDHHHQHNN-DPIGMAMDQYTQL---HIFNPFSS- 71

Query: 71  ARWRSHFPAARNS-----GMAGEEEVEGSESESMG--GGMREMIYRIAAMQPIEIDPEAV 130
               SHFP   +S      ++G++E +  E E +   G M+EM+Y+IAAMQ ++IDP  V
Sbjct: 72  ----SHFPPLSSSLTTTTLLSGDQEDDEDEEEPLEELGAMKEMMYKIAAMQSVDIDPATV 131

Query: 131 KAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLK 190
           K PKRRNV+IS DPQSVAARHRRERISERIRILQR+VPGGTKMDTASMLDEAI Y+KFLK
Sbjct: 132 KKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 181

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BLAST of Chy3G065310 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 122.5 bits (306), Expect = 6.5e-27
Identity = 71/123 (57.72%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 92  EGSESESMGGGMREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISE 151
           E  E +     M+EM Y IA MQP++IDP  V  P RRNV+IS DPQ+V AR RRERISE
Sbjct: 77  EDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISE 136

Query: 152 RIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQIAAASSSSSAYAFPT-VAHYN 211
           +IRIL+RIVPGG KMDTASMLDEAI Y KFLK Q+  LQ    S   +  A P+ + +Y+
Sbjct: 137 KIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ--PHSQIGAPMANPSYLCYYH 196

Query: 212 NKQ 214
           N Q
Sbjct: 197 NSQ 197

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BLAST of Chy3G065310 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25
Identity = 69/128 (53.91%), Postives = 88/128 (68.75%), Query Frame = 0


Query: 103 MREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPG 162
           M+EMIYR AA +P+    E V+ PKR+NVKIS DPQ+VAAR RRERISE+IR+LQ +VPG
Sbjct: 245 MKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPG 304

Query: 163 GTKMDTASMLDEAIHYLKFLKNQLHSLQ-------IAAASSSSSAYAFPTV--AHYNNKQ 222
           GTKMDTASMLDEA +YLKFL+ Q+ +L+           S SS+  +FP    +    + 
Sbjct: 305 GTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSFPLFHPSFLPLQN 364

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BLAST of Chy3G065310 vs. ExPASy TrEMBL
Match: A0A0A0LRA8 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G357190 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 5.7e-119
Identity = 229/240 (95.42%), Postives = 231/240 (96.25%), Query Frame = 0


Query: 1   MDIEEMGKFGENFEYNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVA 60
           MDIEEMGKFGENFE NEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVA
Sbjct: 1   MDIEEMGKFGENFECNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVA 60

Query: 61  PPSFPPYSAAARWRSHFPAARNSGM-AGEEEVEGSESESMGGGMREMIYRIAAMQPIEID 120
           PPSFPPYSAAARWRSHFPA RNS M AGEEEVEGSESESMGGGMREMIYRIAAMQPIEID
Sbjct: 61  PPSFPPYSAAARWRSHFPATRNSRMKAGEEEVEGSESESMGGGMREMIYRIAAMQPIEID 120

Query: 121 PEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYL 180
           PEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYL
Sbjct: 121 PEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYL 180

Query: 181 KFLKNQLHSLQIAAA-----SSSSSAYAFPTVAHYNNKQQNLIHFPQLPTHPHHHLNQDA 235
           KFLKNQLHSLQIAAA     SSSSSAYAFPT+AHYNNKQQ+LIHFPQLPTHPHHHLNQDA
Sbjct: 181 KFLKNQLHSLQIAAASSSSSSSSSSAYAFPTIAHYNNKQQHLIHFPQLPTHPHHHLNQDA 240

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BLAST of Chy3G065310 vs. ExPASy TrEMBL
Match: A0A1S3BA85 (transcription factor HEC3-like OS=Cucumis melo OX=3656 GN=LOC103487880 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 5.4e-117
Identity = 222/234 (94.87%), Postives = 225/234 (96.15%), Query Frame = 0


Query: 1   MDIEEMGKFGENFEYNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVA 60
           MDIEEMGKFGENFEYNEIAT+LDFGFGSSNI STSH IFPSFNNIPPTTLSMNNATH VA
Sbjct: 1   MDIEEMGKFGENFEYNEIATTLDFGFGSSNIASTSHLIFPSFNNIPPTTLSMNNATHPVA 60

Query: 61  PPSFPPYSAAARWRSHFPAARNSGMAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDP 120
           PPSFPPYSAAARWRSHFPA RNSG  GEEEVEGSESESMGGGMREMIYRIAAMQPIEIDP
Sbjct: 61  PPSFPPYSAAARWRSHFPATRNSGTTGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDP 120

Query: 121 EAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLK 180
           EAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLK
Sbjct: 121 EAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLK 180

Query: 181 FLKNQLHSLQIAAASSSSSAYAFPTVAHYNNKQQNLIHFPQLPTHPHHHLNQDA 235
           FLKNQLHSLQIAAASSSSSAY FPTVAHYNNK Q+LIHFPQ PTHPHHHL+QDA
Sbjct: 181 FLKNQLHSLQIAAASSSSSAYVFPTVAHYNNK-QHLIHFPQFPTHPHHHLDQDA 233

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BLAST of Chy3G065310 vs. ExPASy TrEMBL
Match: A0A5A7V0Q5 (Transcription factor HEC3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00430 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 2.1e-68
Identity = 143/150 (95.33%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 87  GEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRR 146
           GEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRR
Sbjct: 49  GEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRR 108

Query: 147 ERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQIAAA--SSSSSAYAFP 206
           ERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQIAAA  SSSSSAY FP
Sbjct: 109 ERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQIAAASSSSSSSAYVFP 168

Query: 207 TVAHYNNKQQNLIHFPQLPTHPHHHLNQDA 235
           TVAHYNNK Q+LIHFPQ PTHPHHHL+QDA
Sbjct: 169 TVAHYNNK-QHLIHFPQFPTHPHHHLDQDA 197

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BLAST of Chy3G065310 vs. ExPASy TrEMBL
Match: A0A6J1KA10 (transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111492009 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 4.2e-53
Identity = 133/225 (59.11%), Postives = 151/225 (67.11%), Query Frame = 0


Query: 3   IEEMGKFGENFEYNEIATSLDFGFGSSNITSTS------HPIFPSFNNIPPTTLSMNNAT 62
           + +M  F E FE+ ++  S  F FGSSNI +TS       PI PS+     +T SMNNAT
Sbjct: 4   LTQMENFSEYFEFTKLPAS-PFSFGSSNIGATSIRFQNPTPILPSY--ALSSTASMNNAT 63

Query: 63  HAVAPPSFPPYSAAARWRSHFPAARNSGMAGEEEVEGSESESMGGGMREMIYRIAAMQPI 122
           H +APP  PP+S+AA   SH                  + +SM G MREMIYRIAAMQPI
Sbjct: 64  HPLAPPCLPPHSSAATPNSH---------------TKQQQDSM-GAMREMIYRIAAMQPI 123

Query: 123 EIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAI 182
           +IDPEAVK PKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAI
Sbjct: 124 QIDPEAVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAI 183

Query: 183 HYLKFLKNQLHSLQIAAASSSSSAYAFPTVAHYNNKQQNLIHFPQ 222
           HY+KFLKNQ+  LQIAA +  SSA+ FP             HF Q
Sbjct: 184 HYVKFLKNQVQCLQIAANNRPSSAFGFPAAMSAGGSNYKQFHFAQ 209

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BLAST of Chy3G065310 vs. ExPASy TrEMBL
Match: A0A6J1HET7 (transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111462825 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.8e-48
Identity = 124/219 (56.62%), Postives = 143/219 (65.30%), Query Frame = 0


Query: 3   IEEMGKFGENFEYNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVAPP 62
           + +M  F E FE+ +  +S      S    + + PI PS+     +T SMNNATH +APP
Sbjct: 4   LTQMENFSEFFEFTDFGSST-----SHRFQNPTPPILPSY--ALSSTASMNNATHPLAPP 63

Query: 63  SFPPYSAAARWRSHFPAARNSGMAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEA 122
             PP+S AA   SH                  + +SM G MREMIYRIAAMQPI+IDPEA
Sbjct: 64  CPPPHSPAATPNSH---------------TKQQQDSM-GAMREMIYRIAAMQPIQIDPEA 123

Query: 123 VKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFL 182
           VK PKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHY+KFL
Sbjct: 124 VKPPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 183

Query: 183 KNQLHSLQIAAASSSSSAYAFPTVAHYNNKQQNLIHFPQ 222
           K+Q+ SLQIAA +  SSA+ FP              F Q
Sbjct: 184 KSQVQSLQIAANNRPSSAFRFPAAMSAGGSNYKQFQFAQ 199

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BLAST of Chy3G065310 vs. NCBI nr
Match: XP_011650182.1 (transcription factor HEC3 [Cucumis sativus] >KAE8652076.1 hypothetical protein Csa_018561 [Cucumis sativus])

HSP 1 Score: 445 bits (1144), Expect = 4.51e-157
Identity = 229/239 (95.82%), Postives = 231/239 (96.65%), Query Frame = 0


Query: 1   MDIEEMGKFGENFEYNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVA 60
           MDIEEMGKFGENFE NEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVA
Sbjct: 1   MDIEEMGKFGENFECNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVA 60

Query: 61  PPSFPPYSAAARWRSHFPAARNSGMAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDP 120
           PPSFPPYSAAARWRSHFPA RNS MAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDP
Sbjct: 61  PPSFPPYSAAARWRSHFPATRNSRMAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDP 120

Query: 121 EAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLK 180
           EAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLK
Sbjct: 121 EAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLK 180

Query: 181 FLKNQLHSLQIAAASSSSS-----AYAFPTVAHYNNKQQNLIHFPQLPTHPHHHLNQDA 234
           FLKNQLHSLQIAAASSSSS     AYAFPT+AHYNNKQQ+LIHFPQLPTHPHHHLNQDA
Sbjct: 181 FLKNQLHSLQIAAASSSSSSSSSSAYAFPTIAHYNNKQQHLIHFPQLPTHPHHHLNQDA 239

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BLAST of Chy3G065310 vs. NCBI nr
Match: XP_008444609.1 (PREDICTED: transcription factor HEC3-like [Cucumis melo])

HSP 1 Score: 434 bits (1115), Expect = 9.55e-153
Identity = 222/234 (94.87%), Postives = 225/234 (96.15%), Query Frame = 0


Query: 1   MDIEEMGKFGENFEYNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVA 60
           MDIEEMGKFGENFEYNEIAT+LDFGFGSSNI STSH IFPSFNNIPPTTLSMNNATH VA
Sbjct: 1   MDIEEMGKFGENFEYNEIATTLDFGFGSSNIASTSHLIFPSFNNIPPTTLSMNNATHPVA 60

Query: 61  PPSFPPYSAAARWRSHFPAARNSGMAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDP 120
           PPSFPPYSAAARWRSHFPA RNSG  GEEEVEGSESESMGGGMREMIYRIAAMQPIEIDP
Sbjct: 61  PPSFPPYSAAARWRSHFPATRNSGTTGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDP 120

Query: 121 EAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLK 180
           EAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLK
Sbjct: 121 EAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLK 180

Query: 181 FLKNQLHSLQIAAASSSSSAYAFPTVAHYNNKQQNLIHFPQLPTHPHHHLNQDA 234
           FLKNQLHSLQIAAASSSSSAY FPTVAHYNNKQ +LIHFPQ PTHPHHHL+QDA
Sbjct: 181 FLKNQLHSLQIAAASSSSSAYVFPTVAHYNNKQ-HLIHFPQFPTHPHHHLDQDA 233

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BLAST of Chy3G065310 vs. NCBI nr
Match: XP_038886669.1 (transcription factor HEC2-like [Benincasa hispida])

HSP 1 Score: 274 bits (701), Expect = 1.01e-89
Identity = 167/239 (69.87%), Postives = 181/239 (75.73%), Query Frame = 0


Query: 1   MDIEE-MGKFG--ENFEYNEIATSLDFGFGSSNI-----TSTSHPIFPSFNNIPP-TTLS 60
           M+IE+ MG+F   EN E +E+   L F FGSSNI     TSTS+PIF SFNN+PP +T S
Sbjct: 1   MNIEDDMGEFAVAENLELSEVG-GLAFAFGSSNIGVSSSTSTSYPIFSSFNNLPPPSTFS 60

Query: 61  MNNATHAVAPPSFPPYSAAARWRS-HFPAARNSGMAGEEEVEGSESESMGGGMREMIYRI 120
           MNN T  VAPPSFPPYS+A RW S H PA   S M GEEE    ESESMGG MREMIYR+
Sbjct: 61  MNNPTQPVAPPSFPPYSSAPRWTSSHLPATPISAMKGEEE----ESESMGG-MREMIYRM 120

Query: 121 AAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTAS 180
           AAMQPIEIDPE VK PKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTAS
Sbjct: 121 AAMQPIEIDPETVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTAS 180

Query: 181 MLDEAIHYLKFLKNQLHSLQIAAASSSSSAYAFPTVAHYNN--KQQNLIHFPQLPTHPH 227
           MLDEAIHYLKFLKNQLHSLQIAAA++    Y FPT          ++L HFPQ   H H
Sbjct: 181 MLDEAIHYLKFLKNQLHSLQIAAATT----YPFPTAMSSGGTTNYKHLFHFPQPSGHNH 229

[Close]

BLAST of Chy3G065310 vs. NCBI nr
Match: KAA0060910.1 (transcription factor HEC3-like [Cucumis melo var. makuwa])

HSP 1 Score: 271 bits (692), Expect = 7.00e-89
Identity = 143/150 (95.33%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 87  GEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRR 146
           GEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRR
Sbjct: 49  GEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRR 108

Query: 147 ERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQIAAASSSSS--AYAFP 206
           ERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQIAAASSSSS  AY FP
Sbjct: 109 ERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQIAAASSSSSSSAYVFP 168

Query: 207 TVAHYNNKQQNLIHFPQLPTHPHHHLNQDA 234
           TVAHYNNKQ +LIHFPQ PTHPHHHL+QDA
Sbjct: 169 TVAHYNNKQ-HLIHFPQFPTHPHHHLDQDA 197

[Close]

BLAST of Chy3G065310 vs. NCBI nr
Match: XP_023546334.1 (transcription factor HEC1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221 bits (563), Expect = 5.78e-69
Identity = 136/229 (59.39%), Postives = 154/229 (67.25%), Query Frame = 0


Query: 1   MDI-EEMGKFGENFEYNEIATSLDFGFGSSNITSTSH-------PIFPSFNNIPPTTLSM 60
           MD+  +M  F E FE+ E+  S  F FGSSNI +TSH       PI PS+     +T SM
Sbjct: 1   MDVLTQMENFSEFFEFTELP-SWPFSFGSSNIGATSHRFQNPTPPILPSYALS--STASM 60

Query: 61  NNATHAVAPPSFPPYSAAARWRSHFPAARNSGMAGEEEVEGSESESMGGGMREMIYRIAA 120
           NNATH +APP  PP+S AA   SH               +  + +SMG  MREMIYRIAA
Sbjct: 61  NNATHPLAPPCPPPHSPAATPNSH--------------TKQQQQDSMGA-MREMIYRIAA 120

Query: 121 MQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASML 180
           MQPI+IDPEAVK PKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASML
Sbjct: 121 MQPIQIDPEAVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASML 180

Query: 181 DEAIHYLKFLKNQLHSLQIAAASSSSSAYAFPTVAHYNNKQQNLIHFPQ 221
           DEAIHY+KFLK+Q+ SLQIAA +  SSA+ FP              F Q
Sbjct: 181 DEAIHYVKFLKSQVQSLQIAANNRPSSAFGFPAAMSAGGSNYKQFQFAQ 211

[Close]

BLAST of Chy3G065310 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 152.9 bits (385), Expect = 3.2e-37
Identity = 77/88 (87.50%), Postives = 83/88 (94.32%), Query Frame = 0


Query: 103 MREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPG 162
           MREMI+RIA MQPI IDPEAVK PKRRNV+ISKDPQSVAARHRRERISERIRILQR+VPG
Sbjct: 98  MREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPG 157

Query: 163 GTKMDTASMLDEAIHYLKFLKNQLHSLQ 191
           GTKMDTASMLDEAIHY+KFLK Q+ SL+
Sbjct: 158 GTKMDTASMLDEAIHYVKFLKKQVQSLE 185

[Close]

BLAST of Chy3G065310 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 143.7 bits (361), Expect = 1.9e-34
Identity = 92/168 (54.76%), Postives = 110/168 (65.48%), Query Frame = 0


Query: 26  FGSSNITSTSHPIFP-SFNNIPPTTLSMNNATHAVAP--PSFPPYSAAARWRSHFPAARN 85
           F +SN     H I   S +N  P      N TH+  P   + P +     +R     A +
Sbjct: 22  FSNSNPNPNPHNIMMLSESNTHPFFF---NPTHSHLPFDQTMPHHQPGLNFR----YAPS 81

Query: 86  SGMAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAA 145
              +  E+  G    +    MREMI+RIA MQPI IDPE+VK PKR+NV+ISKDPQSVAA
Sbjct: 82  PSSSLPEKRGGCSDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAA 141

Query: 146 RHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQ 191
           RHRRERISERIRILQR+VPGGTKMDTASMLDEAIHY+KFLK Q+ SL+
Sbjct: 142 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182

[Close]

BLAST of Chy3G065310 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-33
Identity = 93/186 (50.00%), Postives = 119/186 (63.98%), Query Frame = 0


Query: 11  ENFEYNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVAPPSFPPYSAA 70
           +N+ +N I         SSN  + +       NN  P  ++M+  T       F P+S+ 
Sbjct: 12  QNYTWNNI-------INSSNNNNKNDDHHHQHNN-DPIGMAMDQYTQL---HIFNPFSS- 71

Query: 71  ARWRSHFPAARNS-----GMAGEEEVEGSESESMG--GGMREMIYRIAAMQPIEIDPEAV 130
               SHFP   +S      ++G++E +  E E +   G M+EM+Y+IAAMQ ++IDP  V
Sbjct: 72  ----SHFPPLSSSLTTTTLLSGDQEDDEDEEEPLEELGAMKEMMYKIAAMQSVDIDPATV 131

Query: 131 KAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLK 190
           K PKRRNV+IS DPQSVAARHRRERISERIRILQR+VPGGTKMDTASMLDEAI Y+KFLK
Sbjct: 132 KKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 181

[Close]

BLAST of Chy3G065310 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 4.6e-28
Identity = 71/123 (57.72%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 92  EGSESESMGGGMREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISE 151
           E  E +     M+EM Y IA MQP++IDP  V  P RRNV+IS DPQ+V AR RRERISE
Sbjct: 77  EDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISE 136

Query: 152 RIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQIAAASSSSSAYAFPT-VAHYN 211
           +IRIL+RIVPGG KMDTASMLDEAI Y KFLK Q+  LQ    S   +  A P+ + +Y+
Sbjct: 137 KIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ--PHSQIGAPMANPSYLCYYH 196

Query: 212 NKQ 214
           N Q
Sbjct: 197 NSQ 197

[Close]

BLAST of Chy3G065310 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 8.7e-27
Identity = 69/128 (53.91%), Postives = 88/128 (68.75%), Query Frame = 0


Query: 103 MREMIYRIAAMQPIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPG 162
           M+EMIYR AA +P+    E V+ PKR+NVKIS DPQ+VAAR RRERISE+IR+LQ +VPG
Sbjct: 245 MKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPG 304

Query: 163 GTKMDTASMLDEAIHYLKFLKNQLHSLQ-------IAAASSSSSAYAFPTV--AHYNNKQ 222
           GTKMDTASMLDEA +YLKFL+ Q+ +L+           S SS+  +FP    +    + 
Sbjct: 305 GTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSFPLFHPSFLPLQN 364

The following BLAST results are available for this feature:

BLAST of Chy3G065310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHA7	4.5e-36	87.50	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9SND4	2.7e-33	54.76	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q9LXD8	2.3e-32	50.00	Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1	[more]
O81313	6.5e-27	57.72	Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3	[more]
Q8S3D2	1.2e-25	53.91	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]

BLAST of Chy3G065310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRA8	5.7e-119	95.42	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G357190 PE=4 S...	[more]
A0A1S3BA85	5.4e-117	94.87	transcription factor HEC3-like OS=Cucumis melo OX=3656 GN=LOC103487880 PE=4 SV=1	[more]
A0A5A7V0Q5	2.1e-68	95.33	Transcription factor HEC3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A6J1KA10	4.2e-53	59.11	transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111492009 PE=4 ...	[more]
A0A6J1HET7	1.8e-48	56.62	transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111462825 PE=...	[more]

BLAST of Chy3G065310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650182.1	4.51e-157	95.82	transcription factor HEC3 [Cucumis sativus] >KAE8652076.1 hypothetical protein C...	[more]
XP_008444609.1	9.55e-153	94.87	PREDICTED: transcription factor HEC3-like [Cucumis melo]	[more]
XP_038886669.1	1.01e-89	69.87	transcription factor HEC2-like [Benincasa hispida]	[more]
KAA0060910.1	7.00e-89	95.33	transcription factor HEC3-like [Cucumis melo var. makuwa]	[more]
XP_023546334.1	5.78e-69	59.39	transcription factor HEC1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy3G065310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67060.1	3.2e-37	87.50	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G50330.1	1.9e-34	54.76	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	1.6e-33	50.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	4.6e-28	57.72	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	8.7e-27	53.91	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 139..188 e-value: 2.7E-13 score: 60.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 143..182 e-value: 9.4E-7 score: 28.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 133..182 score: 15.198898
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 129..192 e-value: 3.5E-11 score: 44.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 137..192
None	No IPR available	PANTHER	PTHR45914:SF29	BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN	coord: 37..217
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 37..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G065310.1	Chy3G065310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity