Chy3G065100 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G065100
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	calmodulin-like
Location	chrH03: 17529636 .. 17530021 (+)
RNA-Seq Expression	Chy3G065100
Synteny	Chy3G065100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCTTCCTGGTGTAAGCAAGTTCAATTTCTCAAGGGAAGAGATGAAGGAAATCTTCCGTGAGCACGACATCGACGGAGACGGTTACCTCAGCATCAGTGAGCTCATCAAAGCCATGGGGTTCTTAGGTCACTCTATACCATTCTACAAAGCTCACTACGGCATGGCTTATTGTGACGAGAATGGTGACGGCCTCATCTCAGAAGACGAGCTTGACAAACTCATCGACTATGCCGAAAGGTTTCAGAAAAAAAGGCGTTGATAGAAATTAAAATTGGCAACACCCTATGATTTTATGTTTTTGTTTCGTAAGCTTTTGACTTTCACTAATAAAGGAAGGAAGGGCTGGGCTTGAGCAAGTTGGTCCTTCTTGTGTTTATGTAA

mRNA sequence

ATGGCCCTTCCTGGTGTAAGCAAGTTCAATTTCTCAAGGGAAGAGATGAAGGAAATCTTCCGTGAGCACGACATCGACGGAGACGGTTACCTCAGCATCAGTGAGCTCATCAAAGCCATGGGGTTCTTAGGTCACTCTATACCATTCTACAAAGCTCACTACGGCATGGCTTATTGTGACGAGAATGGTGACGGCCTCATCTCAGAAGACGAGCTTGACAAACTCATCGACTATGCCGAAAGGAAGGAAGGGCTGGGCTTGAGCAAGTTGGTCCTTCTTGTGTTTATGTAA

Coding sequence (CDS)

ATGGCCCTTCCTGGTGTAAGCAAGTTCAATTTCTCAAGGGAAGAGATGAAGGAAATCTTCCGTGAGCACGACATCGACGGAGACGGTTACCTCAGCATCAGTGAGCTCATCAAAGCCATGGGGTTCTTAGGTCACTCTATACCATTCTACAAAGCTCACTACGGCATGGCTTATTGTGACGAGAATGGTGACGGCCTCATCTCAGAAGACGAGCTTGACAAACTCATCGACTATGCCGAAAGGAAGGAAGGGCTGGGCTTGAGCAAGTTGGTCCTTCTTGTGTTTATGTAA

Protein sequence

MALPGVSKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGLISEDELDKLIDYAERKEGLGLSKLVLLVFM*

Homology

[Close]

BLAST of Chy3G065100 vs. ExPASy Swiss-Prot
Match: Q5ZD81 (Probable calcium-binding protein CML12 OS=Oryza sativa subsp. japonica OX=39947 GN=CML12 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.2e-05
Identity = 24/62 (38.71%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 15  EMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGLISEDELDK 74
           E+ E FR  D DG+G++S +EL ++M  +GH I + +    M   D +GDGLIS +E   
Sbjct: 175 ELAEAFRAFDRDGNGFISAAELARSMARMGHPICYAELTDMMREADTDGDGLISFEEFTA 234

Query: 75  LI 77
           ++
Sbjct: 235 IM 236

[Close]

BLAST of Chy3G065100 vs. ExPASy Swiss-Prot
Match: Q9M8U1 (Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.9e-05
Identity = 25/76 (32.89%), Postives = 42/76 (55.26%), Query Frame = 0


Query: 4   PGVSKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENG 63
           P + K  ++ +++K IFR  D DG+GY++ +EL  +M  LGH++   +    +   D +G
Sbjct: 83  PDLVKCPYTDDQLKAIFRMFDRDGNGYITAAELAHSMAKLGHALTAEELTGMIKEADRDG 142

Query: 64  DGLISEDELDKLIDYA 80
           DG I   E  + I  A
Sbjct: 143 DGCIDFQEFVQAITSA 158

[Close]

BLAST of Chy3G065100 vs. ExPASy Swiss-Prot
Match: Q8X187 (Calmodulin OS=Paxillus involutus OX=71150 GN=calA PE=2 SV=3)

HSP 1 Score: 47.0 bits (110), Expect = 1.4e-04
Identity = 25/65 (38.46%), Postives = 37/65 (56.92%), Query Frame = 0


Query: 12  SREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGLISEDE 71
           S EE+KE F+  D DG+GY+S +EL   M  LG  +   +    +   D +GDG I+ DE
Sbjct: 82  SEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDTEVDEMIREADVDGDGQINYDE 141

Query: 72  LDKLI 77
             K++
Sbjct: 142 FVKMM 146

[Close]

BLAST of Chy3G065100 vs. ExPASy Swiss-Prot
Match: Q9LQN4 (Probable calcium-binding protein CML17 OS=Arabidopsis thaliana OX=3702 GN=CML17 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.9e-04
Identity = 22/69 (31.88%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 11  FSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGLISED 70
           ++ E++  +FR  D DG+G+++ +EL  +M  LGH++   +    +   D +GDG I+  
Sbjct: 91  YTEEQLLRLFRIFDTDGNGFITAAELAHSMAKLGHALTVAELTGMIKEADSDGDGRINFQ 150

Query: 71  ELDKLIDYA 80
           E  K I+ A
Sbjct: 151 EFAKAINSA 159

[Close]

BLAST of Chy3G065100 vs. ExPASy Swiss-Prot
Match: Q9FZ75 (Probable calcium-binding protein CML15 OS=Arabidopsis thaliana OX=3702 GN=CML15 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 2.4e-04
Identity = 22/63 (34.92%), Postives = 37/63 (58.73%), Query Frame = 0


Query: 14  EEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGLISEDELD 73
           E++ EIF+  D DG+G++S +EL  AM  +G  + + +    +   D NGDG+IS  E  
Sbjct: 81  EQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEMIKEADTNGDGVISFGEFA 140

Query: 74  KLI 77
            ++
Sbjct: 141 SIM 143

[Close]

BLAST of Chy3G065100 vs. ExPASy TrEMBL
Match: A0A0A0LKX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.4e-39
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MALPGVSKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCD 60
          MALPGVSKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCD
Sbjct: 1  MALPGVSKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCD 60

Query: 61 ENGDGLISEDELDKLIDYAER 82
          ENGDGLISEDELDKLIDYAER
Sbjct: 61 ENGDGLISEDELDKLIDYAER 81

[Close]

BLAST of Chy3G065100 vs. ExPASy TrEMBL
Match: A0A5A7V2Z9 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00190 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.6e-38
Identity = 81/85 (95.29%), Postives = 81/85 (95.29%), Query Frame = 0


Query: 1  MALPGVSKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCD 60
          MA  GVSKFNFSREEMKEIFREHDIDGDGYLSI ELIKAMGFLGHSIPFYKAHYGMAY D
Sbjct: 1  MAHHGVSKFNFSREEMKEIFREHDIDGDGYLSIGELIKAMGFLGHSIPFYKAHYGMAYSD 60

Query: 61 ENGDGLISEDELDKLIDYAERKEGL 86
          ENGDGLISEDELDKLIDYAERKEGL
Sbjct: 61 ENGDGLISEDELDKLIDYAERKEGL 85

[Close]

BLAST of Chy3G065100 vs. ExPASy TrEMBL
Match: A0A5A7UYC0 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00250 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 9.9e-25
Identity = 54/75 (72.00%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 7  SKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGL 66
          SK   SRE++KEIFREHDIDGDG LS+SE++KA GF G  +PFYKAHYGMA+ DENGDG 
Sbjct: 6  SKLQLSREDIKEIFREHDIDGDGRLSLSEMVKAFGFFGSILPFYKAHYGMAHADENGDGY 65

Query: 67 ISEDELDKLIDYAER 82
          I E+ELDKL+DYAE+
Sbjct: 66 IEEEELDKLVDYAEK 80

[Close]

BLAST of Chy3G065100 vs. ExPASy TrEMBL
Match: A0A6J1CSH1 (probable calcium-binding protein CML15 OS=Momordica charantia OX=3673 GN=LOC111013915 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.4e-23
Identity = 53/74 (71.62%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 8   KFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGLI 67
           K  FSR ++KEIF EHDIDGDG LS+SELIKA  FLG  IP YKAHYG+A+ D++GDGLI
Sbjct: 70  KIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLI 129

Query: 68  SEDELDKLIDYAER 82
           SE+ELDKL+DYAE+
Sbjct: 130 SEEELDKLVDYAEK 143

[Close]

BLAST of Chy3G065100 vs. ExPASy TrEMBL
Match: A0A0A0LRC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.1e-22
Identity = 49/75 (65.33%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 7  SKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGL 66
          ++   SRE++KEIFREHDIDGDG LS++E++KA G  G  +PFYKAHYGMA+ DENGDG 
Sbjct: 6  TRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADENGDGF 65

Query: 67 ISEDELDKLIDYAER 82
          I E+ELDKL+DYA++
Sbjct: 66 IEEEELDKLVDYAQK 80

[Close]

BLAST of Chy3G065100 vs. NCBI nr
Match: KGN62525.1 (hypothetical protein Csa_022453 [Cucumis sativus])

HSP 1 Score: 171 bits (434), Expect = 1.66e-53
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MALPGVSKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCD 60
          MALPGVSKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCD
Sbjct: 1  MALPGVSKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCD 60

Query: 61 ENGDGLISEDELDKLIDYAER 81
          ENGDGLISEDELDKLIDYAER
Sbjct: 61 ENGDGLISEDELDKLIDYAER 81

[Close]

BLAST of Chy3G065100 vs. NCBI nr
Match: KAA0060886.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa])

HSP 1 Score: 168 bits (425), Expect = 3.80e-52
Identity = 81/86 (94.19%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1  MALPGVSKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCD 60
          MA  GVSKFNFSREEMKEIFREHDIDGDGYLSI ELIKAMGFLGHSIPFYKAHYGMAY D
Sbjct: 1  MAHHGVSKFNFSREEMKEIFREHDIDGDGYLSIGELIKAMGFLGHSIPFYKAHYGMAYSD 60

Query: 61 ENGDGLISEDELDKLIDYAERKEGLG 86
          ENGDGLISEDELDKLIDYAERKEGL 
Sbjct: 61 ENGDGLISEDELDKLIDYAERKEGLA 86

[Close]

BLAST of Chy3G065100 vs. NCBI nr
Match: KAA0060892.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa])

HSP 1 Score: 123 bits (308), Expect = 2.72e-34
Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 5  GVSKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGD 64
            SK   SRE++KEIFREHDIDGDG LS+SE++KA GF G  +PFYKAHYGMA+ DENGD
Sbjct: 4  AASKLQLSREDIKEIFREHDIDGDGRLSLSEMVKAFGFFGSILPFYKAHYGMAHADENGD 63

Query: 65 GLISEDELDKLIDYAER 81
          G I E+ELDKL+DYAE+
Sbjct: 64 GYIEEEELDKLVDYAEK 80

[Close]

BLAST of Chy3G065100 vs. NCBI nr
Match: KGN62516.1 (hypothetical protein Csa_022521 [Cucumis sativus])

HSP 1 Score: 115 bits (288), Expect = 3.04e-31
Identity = 49/77 (63.64%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 5  GVSKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGD 64
            ++   SRE++KEIFREHDIDGDG LS++E++KA G  G  +PFYKAHYGMA+ DENGD
Sbjct: 4  AATRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADENGD 63

Query: 65 GLISEDELDKLIDYAER 81
          G I E+ELDKL+DYA++
Sbjct: 64 GFIEEEELDKLVDYAQK 80

[Close]

BLAST of Chy3G065100 vs. NCBI nr
Match: XP_022144156.1 (probable calcium-binding protein CML15 [Momordica charantia])

HSP 1 Score: 118 bits (295), Expect = 1.37e-30
Identity = 53/74 (71.62%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 8   KFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGLI 67
           K  FSR ++KEIF EHDIDGDG LS+SELIKA  FLG  IP YKAHYG+A+ D++GDGLI
Sbjct: 70  KIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDGDGLI 129

Query: 68  SEDELDKLIDYAER 81
           SE+ELDKL+DYAE+
Sbjct: 130 SEEELDKLVDYAEK 143

[Close]

BLAST of Chy3G065100 vs. TAIR 10
Match: AT3G03000.1 (EF hand calcium-binding protein family )

HSP 1 Score: 48.5 bits (114), Expect = 3.5e-06
Identity = 25/76 (32.89%), Postives = 42/76 (55.26%), Query Frame = 0


Query: 4   PGVSKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENG 63
           P + K  ++ +++K IFR  D DG+GY++ +EL  +M  LGH++   +    +   D +G
Sbjct: 83  PDLVKCPYTDDQLKAIFRMFDRDGNGYITAAELAHSMAKLGHALTAEELTGMIKEADRDG 142

Query: 64  DGLISEDELDKLIDYA 80
           DG I   E  + I  A
Sbjct: 143 DGCIDFQEFVQAITSA 158

[Close]

BLAST of Chy3G065100 vs. TAIR 10
Match: AT1G32250.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 46.6 bits (109), Expect = 1.3e-05
Identity = 22/69 (31.88%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 11  FSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGLISED 70
           ++ E++  +FR  D DG+G+++ +EL  +M  LGH++   +    +   D +GDG I+  
Sbjct: 91  YTEEQLLRLFRIFDTDGNGFITAAELAHSMAKLGHALTVAELTGMIKEADSDGDGRINFQ 150

Query: 71  ELDKLIDYA 80
           E  K I+ A
Sbjct: 151 EFAKAINSA 159

[Close]

BLAST of Chy3G065100 vs. TAIR 10
Match: AT1G18530.1 (EF hand calcium-binding protein family )

HSP 1 Score: 46.2 bits (108), Expect = 1.7e-05
Identity = 22/63 (34.92%), Postives = 37/63 (58.73%), Query Frame = 0


Query: 14  EEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGLISEDELD 73
           E++ EIF+  D DG+G++S +EL  AM  +G  + + +    +   D NGDG+IS  E  
Sbjct: 81  EQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEMIKEADTNGDGVISFGEFA 140

Query: 74  KLI 77
            ++
Sbjct: 141 SIM 143

[Close]

BLAST of Chy3G065100 vs. TAIR 10
Match: AT1G24620.1 (EF hand calcium-binding protein family )

HSP 1 Score: 45.8 bits (107), Expect = 2.3e-05
Identity = 21/61 (34.43%), Postives = 35/61 (57.38%), Query Frame = 0


Query: 15 EMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGLISEDELDK 74
          E++ +F++ D++GDG +S  EL   M  LGH +P  +    +   D  GDG I+ +E  +
Sbjct: 37 ELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVE 96

Query: 75 L 76
          L
Sbjct: 97 L 97

[Close]

BLAST of Chy3G065100 vs. TAIR 10
Match: AT4G14640.1 (calmodulin 8 )

HSP 1 Score: 43.9 bits (102), Expect = 8.6e-05
Identity = 23/65 (35.38%), Postives = 36/65 (55.38%), Query Frame = 0


Query: 12  SREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGLISEDE 71
           + EE+KE F+  D D +GY+S SEL   M  LG  +   +    +   D +GDG ++ DE
Sbjct: 83  AEEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYDE 142

Query: 72  LDKLI 77
             K++
Sbjct: 143 FVKMM 147

The following BLAST results are available for this feature:

BLAST of Chy3G065100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZD81	2.2e-05	38.71	Probable calcium-binding protein CML12 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9M8U1	4.9e-05	32.89	Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 ...	[more]
Q8X187	1.4e-04	38.46	Calmodulin OS=Paxillus involutus OX=71150 GN=calA PE=2 SV=3	[more]
Q9LQN4	1.9e-04	31.88	Probable calcium-binding protein CML17 OS=Arabidopsis thaliana OX=3702 GN=CML17 ...	[more]
Q9FZ75	2.4e-04	34.92	Probable calcium-binding protein CML15 OS=Arabidopsis thaliana OX=3702 GN=CML15 ...	[more]

BLAST of Chy3G065100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKX1	1.4e-39	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1	[more]
A0A5A7V2Z9	1.6e-38	95.29	Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7UYC0	9.9e-25	72.00	Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1CSH1	2.4e-23	71.62	probable calcium-binding protein CML15 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0LRC1	2.1e-22	65.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1	[more]

BLAST of Chy3G065100 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN62525.1	1.66e-53	100.00	hypothetical protein Csa_022453 [Cucumis sativus]	[more]
KAA0060886.1	3.80e-52	94.19	putative calcium-binding protein CML10 [Cucumis melo var. makuwa]	[more]
KAA0060892.1	2.72e-34	70.13	putative calcium-binding protein CML10 [Cucumis melo var. makuwa]	[more]
KGN62516.1	3.04e-31	63.64	hypothetical protein Csa_022521 [Cucumis sativus]	[more]
XP_022144156.1	1.37e-30	71.62	probable calcium-binding protein CML15 [Momordica charantia]	[more]

BLAST of Chy3G065100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03000.1	3.5e-06	32.89	EF hand calcium-binding protein family	[more]
AT1G32250.1	1.3e-05	31.88	Calcium-binding EF-hand family protein	[more]
AT1G18530.1	1.7e-05	34.92	EF hand calcium-binding protein family	[more]
AT1G24620.1	2.3e-05	34.43	EF hand calcium-binding protein family	[more]
AT4G14640.1	8.6e-05	35.38	calmodulin 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 15..43 e-value: 3.2E-4 score: 30.0
IPR002048	EF-hand domain	PFAM	PF00036	EF-hand_1	coord: 15..40 e-value: 6.4E-8 score: 31.6
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 60..75 e-value: 0.02 score: 14.4
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 11..46 score: 15.182896
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 15..76 e-value: 1.63822E-7 score: 42.5349
None	No IPR available	GENE3D	1.10.238.10		coord: 5..84 e-value: 3.8E-13 score: 51.7
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 60..72
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 24..36
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 7..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G065100.1	Chy3G065100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding