Chy3G064430 (gene) Cucumber (hystrix) v1

Overview
NameChy3G064430
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionprotein RADIALIS-like 4
LocationchrH03: 17160277 .. 17170095 (+)
RNA-Seq ExpressionChy3G064430
SyntenyChy3G064430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGAAAATGCCCTTACAGTGTACGACAAGGACTCGCCCGATCGGTGGCAAAAGCTGGCAAGAGCGGTCGGTGGGAAGACGGCGGACGAGGTGAAGAGACACTATGAGATGCTGGTTGAGGACGTTCATAATATTGAGACTGGCAAAGTTCCTTTGCCTAATTACCCTAAACATTATTCTTACAACAACAACTTTCTTGATGAAGAACAAAGGTTTCTTTTCTTTTCTTCTTCTTATTATTATTTAATTCTCGATTCTTTTGTCTAAAGTTAAATGAGAATCATGAGAAAGAGTCATAATATAATGTTCTCAACTCAAAGTCTAGTCTAACGGTTATATAATAACTAACATTTGGAGACTTTTATATTAATGTAGTGATTAAGTTTATACATTTAAGTTCAAACAAAATGTATCGTGTGAGAGAGTTAGTAAGATATATCCTATTATGATTATAGAATTGGTATCGTGTGTATATATATATTATAGTAAATAATTGATTAAGAAAAATATATGTCACTATCAATTAAAAGTAGTGACTCCCATTGAAGTATATATGGGGAAGAGATTTATATCCTAAGCAAGTTTGTGGGTTGGATTGGGTATGTGACATCATTATTTTTAAACTTAATTTAATTGTTAATTCTCCTAAGTTTTCAACTCAAAATAACATTTTTAAATAACAAATCTAGTTTGTACTAAAAAAATAATAATAATAAATAACGAATTAAATCAAATTAAATCCAAAACTTGTTTGATCAATATGTGTATGTGAAAGTCTAAATAAAAATTTTCAATTTATTTATTTCTCAGTTATTCTACTCCATCCAAACTAATAATTAACTAAACTATGAAATTTCCATTTATTTATAAATCATAACTTTAATCCAAAACTTCATGAATTGAATTGAATTCGTTGAGTAATCGTGTTTGGAAAATACTTAAGGGTTTTTCATTTATGGATTAATGGCTGATTGTGGATTTATTTGATGATATTCTCTTTGATTTATGCAGATTGAAGGGTCTAAAGTTACAATGATTTGCAATCACATCCAAGATTGAAGTGAAGAATAAAAGATAATACAATTACATATTCAACCAAAGCTCCAAAGCTGAAATATATTGTGTACTTGTACATATATAATAAGAAAATTATTCTACAAAGTTTTTCCACTGTACTGTATACATATATATGTATTATGAAGTTATTTATGCTGTATAAAATATCATATATTTTGATTATTTTGATTATTTTGATTAATTTTCTATGCCATATTGTATCAAATTGTCACTTATGTTGTGCAATATGTAAAACATATATAGTATGTGATGTTTTTTTGTTTCAATAAATTATAGTGCAAAATAATTTTAATTATATTACAAATTTAATCTTGAATTTAAAACACATGATATCTAAGACGACGTGAAATTTTAATTTTTATGGGATGAATCGATTAAATTTTTTAAACTTTAAATTTGTGAAAGAATCATACACGATATTAAAAATTATAAGACTTATTAAACAATTTTTATATTTTTTTACTAAATAAATACAAACTGTATTATTTCGTAAATAGTTGTATTATTGTTGTTGTTATCCACAAAAATTGACTAATATCTTCGTGTTGACCAATTCGATTTACAAATACATGAATTTTCGAGCTATTGGGCTTTGTCATTTTGGCCCAATTATATAAGTAGGTCCATTTAACGAACTAGGGAAATATCATTGCACCCTCTTTCACTCGGGTAATAGTCTAAAATTGTATATCATATTACAATATTAATTCAATTTTTTTAAAAATATTCTAAATTAACTAATAGATTAACTCTATTAGGGTAATATTATAATATTAAAAAATTATTTAAGATTTACGGATATAATTTTTTTAAAATAATTAAACAAAGGTTTAAATTGTCTAAAAATATTCCGATTTTTTAATTTAGATAATAATTCAAAAATTAGAATATTTATGAAATATGATGGATAATTTAGGTTTCTCCTCTAAATCTTTCTTTATTGTATGATTTAAATAGAAGCTCCATTTATTTTAATTTTTTTTTATCTATAACATTTTTACTAATTTTGAAATTATATTCTCATACATGTGTATTCTATAAAAATTATTATTATTATTTATTTAATTTCTGTAATGATTATTTTTAGAGATTAAAATTGAACTATGAATTAAAATCGAACAAACTTAAGAAAAATATATGATACCAAAATGGTAATCTAACCTATTTTTCTCTTAGAAAAAATTGTGACAACTTTTTTTAACAAATAATAATAATAAAATAAAATAAGTTTTACTAAAACATATAATTTAATTGTGAAGTGAAACAATCTCATTTTCTTATATATAATATAATAAACATGACCAAATGTTCAAAACACATAAATTAATGTTGTGGACAGGTCAAATATGGCGGTTTCTTTTTAATTTTAAAATTTATGTTCATTTAATCTCTTCATTCATCCTCTAAATCTTCATCATCCATGTCTCAAATATGACCATAATGTGAAAATCAATCCATTTTATATGGTAATTCTATTCTTTTTTTTTTTCTTTTATTAAAATAAGTATCTAAACATGTTATTACGTGGAAGAGATGACCTATTATTAAAAATATTCAAGTGGATTCATAACATGCTTTTGGATATATTAATTTCGATCAAATCATAATTTATCAACGAATGAAATTGATGAAACAGTATAAAAATTGGAAATTCAACTAGATTGAATATTAAAGATCTATAGAATTCATGAGACATTGATTTTGTCAAATATGAACTCCATTTTGATGATGATATGGGATTTCTTGATTGCTGAGGCCTAAATTTTATTATTATATAAAGTCCAAATAAAATATAAATTTTACAGTATTTTAAAATTTTGTTTTGTTTAGAATAACAAACCATATTTTTATAATTAATTATCATCCAAATTCTATTAGTTTTTGTTATTCACATTTTTATGAAAAGAAGACAATTTTTGTTGCTCCCACAAGATTATTGATTGCGTCACATTATTGGAAAAATATTATGAATCGTATTGCAAACTTTATTGACAAATATTAAAGAAGTAATCAATTATCTTTTTAATTTCTTTATGAAATTATGATGGTTGTTTTTTACTAGCTCTCACACGAGAGTTAGTCTAAACTTTGATACATTTTGTATTGTATCAACGAATATTTTGAATTTGATTAGCTATATTTGCAATTGTGGTATATCAAGTGAGTTTAATTAATAATTTATTTGTGAATTATTATATTTCACGTGTGTGACGACTCATTGATTATAGAATCAAAATAGAAACAAGATGTGTATCCTATGTAGGAGACAAGGGATCCTTTGCTTGTCAAATGAGAGTCGTCAAGATAAAAACAAACCTAAGATTATAAAGTGTGTCATGATCATTTTTCGATGGCGCATGCGATTTTGTTTTTAACAACTTTATTTAGGGGTTGCTATTTTCGTATATTTTTCTCTCTTTTTTTCTATTTCAAATTTTAAATTAGGTTATATTATAAGTTTAAGAATTTAGGTATTTTTTTTAAATCTAAATGATGAAATAAACGTATTTGAATAAATTTGAACCTCAAAATCCCGTGCCAATAATATATAGGCATTCATACCGCTTATAATTAGTATGCTCTTATTTTCTTGATGTGAAATATTAAAATCCCCGTATTTCACCATTGTTAAAAGGGAAATTTTGTTTAAAAATCAAATTTAGAATTATCTTCTCTCACCAATTCCTAATTATGTATATATACACACATGTTAAGACCACCAATCTGAAAATTAATTTTTTTATAAGTCACCTTGACGTTTAAATGTTGTAAGGTTAGAGGTTGTTGTCTCGAGATGAGTGTAAACTATTACAGACACTCACGGATATAAAAATATATATATACACACACAAATGGGTGAATCCACAAAGGTTAACTCATTGGGTTTGAACACATAACCTCATTGGACCACTTGCTCTGATACTATATCAAATCATCAATTAATCCAAAAGTTTAAGTTGATGAATAAAGGTAAATTTAGTTATATATTGCCAACAAACAAGATGGACAATGTGGTATCCTAAAATATTGTGCACGTTATATTTTTGTATCAAGTTGCTCATTGGTCAAGGGAGCATGGAAGAATGTGTTTGTCTATGACCGTTTTTTAATTAATTACAAAAATCACCCTTGAAATATATAATAAATTTATTAAAAAAAATTCCTCTAAGGGTATAGTTATAAAAAAAAAAATTGACATCCAAAATTAGATGATCTAATTATAATAACTAAAAATGTAGTAAGAAAAAGTTATAATATATGTTTTTTTTAGAGAAAAGAGGAGACGATGCATTAAAAAAGTGAAAAGGAAACATTAACCGGCAGATCCATTTGTGAAAAGAAAAATGCCGTACCCATACAATTATTTCTATACTTTAAAAGAAAAAAGAAGAAATACGACACGTTTTTTGGGAGCATAACGTCAACTCAATCCACGTCATTACTTTGTTTGTTTTCCACTCTTTCTAATAATTGCTGTCTCCATACCAAAATTATTTCTTCTCATCCCCCACATCAAATTTCCCACCTTTAAATACTGTTTTTCTTTTTCACTAAATCCGTTTTCTAAAGTAACGCAACCTTGTTGGCATTATGGTTTATTTTCCCCAAATGCGTCGCCTTAATGGTTGCATTCCGTCCACTCCTAAGCTTTAGCCCACCCGAGTTCGACCAAATGGTGGATGCAATTTCATTTAATTTTCTCGAAGCTTTTTTTCTTATTCTTTATAACGTTCAATCCACGTGAAATTTTGTGGTTTTACTTTTAGTTAAATTTTATGTTGTATAACATTTTTTTAATTTAGTGTTATTAATAATGCACGAGGAATTTTTATGGATAGCAAAAGAAAAATACAAGTATTTTTTTTTGTATACGTGTATCTCACACGTACATTGGAATAATCAATACACCATACCGATTCGATGTGTATAGCCAACCTCTTCCCAAATGAATACATTTAAACAACATCTGTTGCATTTTTTCTAAAAAAATTAGTATACTGTCAACATCAATTGTACTCAGTCACATTTACTATCTTTTATACGAACATATTTACACACTCGAAAACTCATGACCACTTGACGAAATGAATCACTCGAAAAGTTGCAACCACTCGATAAAAAACAATATATAAAAATTTATATGAAATGTAGGTAAAATGGGCATGTAGAGATTTTCATTTCATAGCTCCTTTTGATATAGTACATATAGAATAGATGCCTAAATAGAAGAATTGTTTTAATTAAAATTCCATGTAGTGGTGATAGATGTCTACTTATCAATATCTATTGTCTGAACAACAAAAAAAAAAAAATGTAAAGAGTGGGATTTGAACTAGGTTTACAAAAGACTTCAAAAATCATTTACCACTAAGCTAATTAATAACACTAACACAATATCAACATTTTTTCTATATTATTGTATAACAAACATAAGGTTTATTTGGGCTCAACTACCCCTAGACGTACACTAAATTTGTTGGTGTCTATCAGTAAGATATATGTGACATGTTACTGTATTTGTAAATATTTTAAATCATTTCGCTATATATAACGTCATGTTTGTATTCCTACAAAAAAAAAAGTATTGTAATAGTTAAGTTGTAATAACAGGATTTTTAATATTTTTAATGTAAGAGAGTATGAAATTATGGTTTTCACAAAAATAATACTTAAAATGTAAATGATTATTATTTAAGTTTGACTTGATTAAGATTTTTCGTTTCATCGGAATGAAAACATATAATTAAAATAAAATAGTAGAATTATTACGAATATTTAAATTATTGAGATTTATAGATTTTGTTGTGGATGTGTTTTTCAACTTGAATTATCATATTTTGACCTAGCTTTTGGGGGTATTTTAAAAAATATAGTGTTTTTTGAAATTAATGTAAAAAATAGGAAGTAAATGAAAAAATAACAAAAGTAGGGTAAATGGGCAAACTATTGTAAAAAATAGGGTGATTTTGAAATTGAACTGAAGTCTTGTACCGGGTACACGACTTATCTGAATCCACGTCAGCCCATTTTTACCATGTGGAAGAAGTCGTGTACCAGTACACGACTTCTATAATAAAAAAAGAAGTTTAAATATGTAATTTATCTAGTCTTTTCTTTTTTTTTACGGAAGGATGTATTGGCACTCTAAGAGGGTGGGATGGTAAAACTGCATTTATGAGGTTATTTAAAGATTGGAATGAGAGAGGAATTTGATTTTGGAATGAAAAAGGTGGAAATTCAGAAAATGGGAAGAAGGAGAAGGAGAGATTATTCGTCTTTTTTTTTTAATTAATGATCATCATATTACGGAGAAATATCATAAAAAGATTTGACTTTTTTTTTCCTTTGGGGGTTTAATTCTTGTTAATTCAAGAGAAGAAACTTGATTAGGAACATGGGTATGGCCAATTGTGTGGATTTGTTTGGTTAATATAATTACTTCACATATTTTTTCAATGCTTCACATATTTGTTTTTGATGTTTATGTAAAATGAATGAAAGTTGAACGTTTATGGTATTTGAAAATTTATAAATTTTGAATGTGTTTTCCATAAAAACACTAATATATCCCTTAACAAAATATTTAATGGTGCTAGAAGCATGGGTGTACTAATTGACACTATTGATATCACACCTTCTAGTTTGTTTTTTGAGTTTTACATATTAAAGATTTTAATTAATAGTTTTACATATTAAAGATTACATATTAAAATCCAATTTATAATTTAAATACTAACATTCAACTCTACTAAACATTTAGCAAACTTTAAAAATTATATAACACCTAAATTATATAAACTAAGGATTTTCTTCATCTCCCTCTACGACATCATCGTCTTGTCGTCGTCGTCTACGTCGAATGCGTCTACGATCTGTGTCGGCAACATTCCGTCGTTGGGTTCGCTGAATAATCTGTTCTATATTTTCCATGGCTTCGTCACACATTGAGCTCAAATTTTGTAGATTGTTTTCCATGGAGAAAGACTGTACGTCTTGAACAAAATTATTCTGAACAATTACAAATAATATAATTAAAAACATGTGCATGCTTGTATTAAATTTATAAAACAAATCATATTAAAATTCTTACCACGCGATAACAGAGAGCTCCTTCAAGTGTGATGAAGCGTTTGGTAATCGATGAGTACCAGAGAAAATAGTTATCTGATACTGTCGGCTCGTGTGTTGCTGTTGCTTCTGCACAAAAATTATATCGTGAATGCCACGTTGCTATATGCTCCGCATGAATCCACGCTCATCTTGATCGTGCTTGCCTCTTAAATCAATTTGGTGCAGGGCCAAATCTGTGGAGCAAAAAACTGGTGGCATTTGCAGTATACTGAACTGTCGCACACACGGTTTGGCTGATGGTTCTCAACGAGATGAAAGCAAAATCAAAGGACCCACGTAAGTCCACACTGCTTGATCATTATGACATTGATTATGAAGCAATGTCATAATGTCAAGCGTGTATGGTTTCCAATTAATCTGTTAAAAAAAACAAACATAAGTAGGCAACAAAAAACATACCTACACAACATTTGTATAATATTTTATTACCTGAGAGTGTATCAGCCGATCAAATATCATCCGGTAGGTCAGCAACATATTTGCTGACTGTTCTGATGAAGGTAGAACACCGCTCCATCTAATGTGTGAAAGAAATTATTAATAAGTTATAAATATTACAAATTTTATTAAAATATATATATACATAAAAAATACCTAAATGATAAAGGTCGACCAACTGACACTTGTAGTGGTACGTGCGGTGCCCCAATGGGGAATCTATCATACGCCCATACTTGCAGCAACATCAATGGGCCGACAATTTCTAAAGATCGTGCATTACTTGCTCGACACAGTTCTCTGTATAACCATGCAAGACATGCAACACCCCAAGCATACGTACCAGCCTGGTCAAAATCGGTTAAGAGTGAAAGAAACATACAGTGGACCAGAGTGTTTGATTTATCAGCAAGCAGAAAACCCCCAATCAGCTCAATAATATATGCACAAGCATATCTCTGAACGCTTACATCATTAGCATCCGGTGGCAATGATGCGAACTGTTTCGCTAACCATGGAAGACTCAACCATAGACCTTTCATGTCAGGCGGTAAAACTTCCAAGTAATCCTCACAGAGTTCCTTACGCTTACTTCCACGTAATCTCCAGTTACAACCATTACTCCACTGTTTGCATCGAACATACCAAATATTTTGATTTGATTCGACTACAACAATTCCGTAATGTTGTGTCACACAATACTTCTTAACGGCCAACTGAAGATCTTTTTTGCAGTCAAATAACATTCCTTTCTCAATTAAACATGATGTGTCTACAGATACATTCCTATTTGCCAATGTAGACCCTTGTTCACAAATAGAATTCGCAATGTCCCAATCTATTTGTGTAAAGGTTTTTTTTTAAGGCATAATGCAACGAAATTAGGGTTTTATAGAGGGTAAGTCATGTATGGGGTACACGACTTTCTGTATGAAGGACAAGTGTCAGACTTTCACGTGAACGAAGTCGTGTACCGGGTACACGACTTCCCTGCTACGCGACAAAATTGTCAGTCCAAGCTACTGTTGACTGCAAACTGCATGCTAGAAGGTACAGATGTACTGGAGTCGCTTACCGGGTACACGACTTCGCTACCCTAATTTTGTCATTTGTTCCATGGGTACTCTATAAATGTCAATAATTTTTAAAAACACATTATTTAAAAAAAAATCCAGCTTTTGTTATTCCATTAATTTCTTAAATATAAAAAATAAGGAAAGAAAAACTTATCCCTTAAAATGTACGTAATGTATTATTAATATATATTTTATATGAAATGGGATATATATTATTAATTAAAAAGTAGATGGATAGAAATAATTGAGTGGTCAATACACATTACTTCAAATAATAGTTCACATAAACAATACTAAAGTTGAATGAATATAAGTGATTCGGTAATATATTACGGTAAATTTATTGTAAATAACAAAACTTTTCGAAATAAATTTAAAATATAGTCGAATTTTATATTTTTTGTTAATAAACTTTTGTGAATATTTTGATTATGCTATATTTAAAAATATTTCCAACATTAAAATTCATAAACACAGTTGTTCTTCAATTCAGTATGTGAATTAAAAATCACTTTTGTTTTCTAAACTTGCATAAAAGTAACAATTCAATCAGTAAACCTTGTATTTTTTATTTTGCAATGAATAACTAAAATTAAAGTACTAAAGTGTTGCAAAATTGAAAATACAAGAACTAAACATTACAAAAGAAAATTCAATGAACAAATTGTTATTTTTATGAAATTTTAGATACAGTTTTTAGCATTGGCCAAAAAAAAAATGTAACATTAACTAAAATGTTAGAGATTCAAACTTCCATTCTAGTAAATTGTTAAATTTAAAAGGTTATAATAAATCATTTAGCTCATTCCCATCTAAAAAAACCTTAATTTGTTATCTAAGTCTTTTCAATTACTTGAAAAACCAAGTTAGCTTTTCAAACCGAAACAAAAACAAACAAATAAAATGATTACCAAACGAGATATCAACCCAAATAAAATTATATAAGAATTATACTAAAATTAGTACAAGTTGGGAACCTAGGTAAGATGTTCACACAAAATTAAGACAAAATGTCAAGAAAAAGAGTTGTGTTCAATGGACCCAATTGAAACTTCCAGAAGGACCTACCAAAAATTTCCCCCCACATGAATGA

mRNA sequence

ATGTTTGAAAATGCCCTTACAGTGTACGACAAGGACTCGCCCGATCGGTGGCAAAAGCTGGCAAGAGCGGTCGGTGGGAAGACGGCGGACGAGGTGAAGAGACACTATGAGATGCTGGTTGAGGACGTTCATAATATTGAGACTGGCAAAAAAAAGAGTTGTGTTCAATGGACCCAATTGAAACTTCCAGAAGGACCTACCAAAAATTTCCCCCCACATGAATGA

Coding sequence (CDS)

ATGTTTGAAAATGCCCTTACAGTGTACGACAAGGACTCGCCCGATCGGTGGCAAAAGCTGGCAAGAGCGGTCGGTGGGAAGACGGCGGACGAGGTGAAGAGACACTATGAGATGCTGGTTGAGGACGTTCATAATATTGAGACTGGCAAAAAAAAGAGTTGTGTTCAATGGACCCAATTGAAACTTCCAGAAGGACCTACCAAAAATTTCCCCCCACATGAATGA

Protein sequence

MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGKKKSCVQWTQLKLPEGPTKNFPPHE*
Homology
[Close]
BLAST of Chy3G064430 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.1e-15
Identity = 36/50 (72.00%), Postives = 44/50 (88.00%), Query Frame = 0 

Query: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 51
          MFE AL VYDKD+PDRW  +A+AVGGKT +EVKRHY++LVED+ NIETG+
Sbjct: 19 MFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGR 68

[Close]
BLAST of Chy3G064430 vs. ExPASy Swiss-Prot
Match: Q1G3C4 (Protein RADIALIS-like 4 OS=Arabidopsis thaliana OX=3702 GN=RL4 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.4e-14
Identity = 33/49 (67.35%), Postives = 44/49 (89.80%), Query Frame = 0 

Query: 2  FENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 51
          FE AL  +DKD+PDRWQK+ARAVGGK+ +EVKRHYE+L+ DV++IE+G+
Sbjct: 19 FEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGR 67

[Close]
BLAST of Chy3G064430 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.4e-14
Identity = 34/47 (72.34%), Postives = 42/47 (89.36%), Query Frame = 0 

Query: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIE 48
          MFE AL VYDKD+PDRWQ +A+AVG K+A+EVKRHY++LVED+ NIE
Sbjct: 19 MFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIE 65

[Close]
BLAST of Chy3G064430 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 5.8e-14
Identity = 31/50 (62.00%), Postives = 44/50 (88.00%), Query Frame = 0 

Query: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 51
          +FE AL  YD+D+PDRW  +ARAVGGK+A+EV+RHYE+L+ DV++IE+G+
Sbjct: 19 LFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIESGR 68

[Close]
BLAST of Chy3G064430 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.2e-13
Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 0 

Query: 2  FENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 51
          FE AL VYDKD+PDRW  +ARAV G+T +EVK+HYE+LVED+  IE+GK
Sbjct: 19 FERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGK 67

[Close]
BLAST of Chy3G064430 vs. ExPASy TrEMBL
Match: A0A5A7VFX7 (Protein RADIALIS-like 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005770 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.5e-20
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 51
          MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK
Sbjct: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 50

[Close]
BLAST of Chy3G064430 vs. ExPASy TrEMBL
Match: A0A0A0LNL9 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G361640 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.5e-20
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 51
          MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK
Sbjct: 23 MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 72

[Close]
BLAST of Chy3G064430 vs. ExPASy TrEMBL
Match: A0A1S3BBR2 (protein RADIALIS-like 4 OS=Cucumis melo OX=3656 GN=LOC103487968 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.5e-20
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 51
          MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK
Sbjct: 23 MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 72

[Close]
BLAST of Chy3G064430 vs. ExPASy TrEMBL
Match: A0A6J1K580 (protein RADIALIS-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111492400 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 5.3e-18
Identity = 45/50 (90.00%), Postives = 49/50 (98.00%), Query Frame = 0 

Query: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 51
          +FENALTVYDKDSPDRWQKLA +VGGKTA+EVKRHYEMLVEDVHNIETG+
Sbjct: 20 VFENALTVYDKDSPDRWQKLASSVGGKTAEEVKRHYEMLVEDVHNIETGR 69

[Close]
BLAST of Chy3G064430 vs. ExPASy TrEMBL
Match: A0A6J1HEM1 (protein RADIALIS-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111462781 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 5.3e-18
Identity = 45/50 (90.00%), Postives = 49/50 (98.00%), Query Frame = 0 

Query: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 51
          +FENALTVYDKDSPDRWQKLA +VGGKTA+EVKRHYEMLVEDVHNIETG+
Sbjct: 19 VFENALTVYDKDSPDRWQKLASSVGGKTAEEVKRHYEMLVEDVHNIETGR 68

[Close]
BLAST of Chy3G064430 vs. NCBI nr
Match: KAA0065236.1 (protein RADIALIS-like 4 [Cucumis melo var. makuwa])

HSP 1 Score: 106 bits (264), Expect = 5.38e-28
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 50
          MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK
Sbjct: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 50

[Close]
BLAST of Chy3G064430 vs. NCBI nr
Match: XP_008444713.1 (PREDICTED: protein RADIALIS-like 4 [Cucumis melo])

HSP 1 Score: 106 bits (264), Expect = 8.26e-28
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 50
          MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK
Sbjct: 23 MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 72

[Close]
BLAST of Chy3G064430 vs. NCBI nr
Match: XP_031737271.1 (protein RADIALIS-like 4 [Cucumis sativus])

HSP 1 Score: 106 bits (264), Expect = 8.50e-28
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 50
          MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK
Sbjct: 23 MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 72

[Close]
BLAST of Chy3G064430 vs. NCBI nr
Match: XP_022962285.1 (protein RADIALIS-like 6 [Cucurbita moschata])

HSP 1 Score: 98.6 bits (244), Expect = 5.23e-25
Identity = 45/50 (90.00%), Postives = 49/50 (98.00%), Query Frame = 0 

Query: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 50
          +FENALTVYDKDSPDRWQKLA +VGGKTA+EVKRHYEMLVEDVHNIETG+
Sbjct: 19 VFENALTVYDKDSPDRWQKLASSVGGKTAEEVKRHYEMLVEDVHNIETGR 68

[Close]
BLAST of Chy3G064430 vs. NCBI nr
Match: KAG7029384.1 (Protein RADIALIS-like 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 98.6 bits (244), Expect = 7.32e-25
Identity = 45/50 (90.00%), Postives = 49/50 (98.00%), Query Frame = 0 

Query: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 50
          +FENALTVYDKDSPDRWQKLA +VGGKTA+EVKRHYEMLVEDVHNIETG+
Sbjct: 14 VFENALTVYDKDSPDRWQKLASSVGGKTAEEVKRHYEMLVEDVHNIETGR 63

[Close]
BLAST of Chy3G064430 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 83.6 bits (205), Expect = 7.5e-17
Identity = 36/50 (72.00%), Postives = 44/50 (88.00%), Query Frame = 0 

Query: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 51
          MFE AL VYDKD+PDRW  +A+AVGGKT +EVKRHY++LVED+ NIETG+
Sbjct: 19 MFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGR 68

[Close]
BLAST of Chy3G064430 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 83.6 bits (205), Expect = 7.5e-17
Identity = 36/50 (72.00%), Postives = 44/50 (88.00%), Query Frame = 0 

Query: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 51
          MFE AL VYDKD+PDRW  +A+AVGGKT +EVKRHY++LVED+ NIETG+
Sbjct: 19 MFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGR 68

[Close]
BLAST of Chy3G064430 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 78.6 bits (192), Expect = 2.4e-15
Identity = 34/47 (72.34%), Postives = 42/47 (89.36%), Query Frame = 0 

Query: 1  MFENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIE 48
          MFE AL VYDKD+PDRWQ +A+AVG K+A+EVKRHY++LVED+ NIE
Sbjct: 19 MFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIE 65

[Close]
BLAST of Chy3G064430 vs. TAIR 10
Match: AT2G18328.1 (RAD-like 4 )

HSP 1 Score: 78.6 bits (192), Expect = 2.4e-15
Identity = 33/49 (67.35%), Postives = 44/49 (89.80%), Query Frame = 0 

Query: 2  FENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETGK 51
          FE AL  +DKD+PDRWQK+ARAVGGK+ +EVKRHYE+L+ DV++IE+G+
Sbjct: 19 FEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGR 67

[Close]
BLAST of Chy3G064430 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 75.1 bits (183), Expect = 2.7e-14
Identity = 30/48 (62.50%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 2  FENALTVYDKDSPDRWQKLARAVGGKTADEVKRHYEMLVEDVHNIETG 50
          FE AL  YD+D+P+RWQ +A+ VGGKT +EVKRHYE+LV+D+++IE G
Sbjct: 22 FEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENG 69

The following BLAST results are available for this feature:
BLAST of Chy3G064430 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q1A1731.1e-1572.00Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1[more]
Q1G3C43.4e-1467.35Protein RADIALIS-like 4 OS=Arabidopsis thaliana OX=3702 GN=RL4 PE=2 SV=1[more]
Q8GW753.4e-1472.34Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1[more]
Q6NNN05.8e-1462.00Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1[more]
Q58FS32.2e-1367.35Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1[more]
BLAST of Chy3G064430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VFX72.5e-20100.00Protein RADIALIS-like 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LNL92.5e-20100.00SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G361640 PE=4 S... [more]
A0A1S3BBR22.5e-20100.00protein RADIALIS-like 4 OS=Cucumis melo OX=3656 GN=LOC103487968 PE=4 SV=1[more]
A0A6J1K5805.3e-1890.00protein RADIALIS-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111492400 PE=4 SV=1[more]
A0A6J1HEM15.3e-1890.00protein RADIALIS-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111462781 PE=4 SV=1[more]
BLAST of Chy3G064430 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0065236.15.38e-28100.00protein RADIALIS-like 4 [Cucumis melo var. makuwa][more]
XP_008444713.18.26e-28100.00PREDICTED: protein RADIALIS-like 4 [Cucumis melo][more]
XP_031737271.18.50e-28100.00protein RADIALIS-like 4 [Cucumis sativus][more]
XP_022962285.15.23e-2590.00protein RADIALIS-like 6 [Cucurbita moschata][more]
KAG7029384.17.32e-2590.00Protein RADIALIS-like 6, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Chy3G064430 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G75250.17.5e-1772.00RAD-like 6 [more]
AT1G75250.27.5e-1772.00RAD-like 6 [more]
AT1G19510.12.4e-1572.34RAD-like 5 [more]
AT2G18328.12.4e-1567.35RAD-like 4 [more]
AT4G39250.12.7e-1462.50RAD-like 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 1..44
e-value: 2.8E-16
score: 61.2
NoneNo IPR availablePANTHERPTHR43952:SF52MYB FAMILY TRANSCRIPTION FACTORcoord: 1..50
IPR044636Transcription factor RADIALIS-likePANTHERPTHR43952MYB FAMILY TRANSCRIPTION FACTOR-RELATEDcoord: 1..50
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 1..40
e-value: 0.00270806
score: 30.6214
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 1..47

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G064430.1Chy3G064430.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003700 DNA-binding transcription factor activity