Chy3G064400 (gene) Cucumber (hystrix) v1

Overview
NameChy3G064400
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH03: 17145911 .. 17146132 (-)
RNA-Seq ExpressionChy3G064400
SyntenyChy3G064400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCTTTGATTGCTCCGGTCCGGTTGGGGAACTTGAAGCATCTTCGAAGAAGGATTGTGGGTTTTCGCCACGTGTTGCTTTCAAGAGAGAGATTGTGGTTGACGATTACTGTTTGATGGGATGGCGCCGATCAGTTTCGCCGATGAAGATGGTGGACAATAGATGGCGAAGATTTAACCTCCTCATCGCTTTCGCAACGAGAAACTGTCTCAGTGCATAA

mRNA sequence

ATGTGCTTTGATTGCTCCGGTCCGGTTGGGGAACTTGAAGCATCTTCGAAGAAGGATTGTGGGTTTTCGCCACGTGTTGCTTTCAAGAGAGAGATTGTGGTTGACGATTACTGTTTGATGGGATGGCGCCGATCAGTTTCGCCGATGAAGATGGTGGACAATAGATGGCGAAGATTTAACCTCCTCATCGCTTTCGCAACGAGAAACTGTCTCAGTGCATAA

Coding sequence (CDS)

ATGTGCTTTGATTGCTCCGGTCCGGTTGGGGAACTTGAAGCATCTTCGAAGAAGGATTGTGGGTTTTCGCCACGTGTTGCTTTCAAGAGAGAGATTGTGGTTGACGATTACTGTTTGATGGGATGGCGCCGATCAGTTTCGCCGATGAAGATGGTGGACAATAGATGGCGAAGATTTAACCTCCTCATCGCTTTCGCAACGAGAAACTGTCTCAGTGCATAA

Protein sequence

MCFDCSGPVGELEASSKKDCGFSPRVAFKREIVVDDYCLMGWRRSVSPMKMVDNRWRRFNLLIAFATRNCLSA*
Homology
[Close]
BLAST of Chy3G064400 vs. NCBI nr
Match: KAG6585599.1 (hypothetical protein SDJN03_18332, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 56.6 bits (135), Expect = 5.80e-08
Identity = 30/53 (56.60%), Postives = 36/53 (67.92%), Query Frame = 0 

Query: 8  PVGELEASSKKDCGFSPRVAF-----KREIVVDDYCLMGWRRSVSPMKMVDNR 55
          P+GE EASSK++ GF+PR  +     KREIV DD CLMG RRS  PMK +  R
Sbjct: 3  PLGEFEASSKRNGGFAPRGNWLRERKKREIVDDDCCLMGRRRSAPPMKKLRQR 55

[Close]
BLAST of Chy3G064400 vs. NCBI nr
Match: KAG7020512.1 (hypothetical protein SDJN02_17197, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 56.6 bits (135), Expect = 2.27e-07
Identity = 30/53 (56.60%), Postives = 36/53 (67.92%), Query Frame = 0 

Query: 8  PVGELEASSKKDCGFSPRVAF-----KREIVVDDYCLMGWRRSVSPMKMVDNR 55
          P+GE EASSK++ GF+PR  +     KREIV DD CLMG RRS  PMK +  R
Sbjct: 3  PLGEFEASSKRNGGFAPRGNWLRERKKREIVDDDCCLMGRRRSAPPMKKLRQR 55

The following BLAST results are available for this feature:
BLAST of Chy3G064400 vs.
Match NameE-valueIdentityDescription
BLAST of Chy3G064400 vs.
Match NameE-valueIdentityDescription
BLAST of Chy3G064400 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6585599.15.80e-0856.60hypothetical protein SDJN03_18332, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7020512.12.27e-0756.60hypothetical protein SDJN02_17197, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Chy3G064400 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G064400.1Chy3G064400.1mRNA