Chy3G064140 (gene) Cucumber (hystrix) v1

Overview
NameChy3G064140
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH03: 17010420 .. 17010827 (+)
RNA-Seq ExpressionChy3G064140
SyntenyChy3G064140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTTCGAAATGAGTCGCAGTCAACGGGAACTCAAAATGATTTTCTTATGGGATTTCAAAACAATATTGATCCCCATGCGATGGGAAGGAGATTCGGTTTGAAGTTTCAGCTTCCTCCTGAGGCAATTACAAGCTCACGCGCGCAGCTTTTGATTCCACCTTCGGTAAATTTGCAATTTGGGTATGTAATATAATCAATGATTTGTGGATTTGGATTATTACCCTCTTCTACTACTTCTTGTTCTACGTCTTTAGTCTCGCTTTCTAGATGGGTCCCGTTTTCTTGTGCTGACATTTTGTTTACACTGACGTCGATGGAGAAATATCTGGTGGATTTTATGAACATGTCCATAAAAGATATGGATAAAGCTCCCATTTTTACCTTCCCAATTCCATTTTACTAA

mRNA sequence

ATGGGGTTTCGAAATGAGTCGCAGTCAACGGGAACTCAAAATGATTTTCTTATGGGATTTCAAAACAATATTGATCCCCATGCGATGGGAAGGAGATTCGGTTTGAAGTTTCAGCTTCCTCCTGAGGCAATTACAAGCTCACGCGCGCAGCTTTTGATTCCACCTTCGGTAAATTTGCAATTTGGATGGGTCCCGTTTTCTTGTGCTGACATTTTGTTTACACTGACGTCGATGGAGAAATATCTGGTGGATTTTATGAACATGTCCATAAAAGATATGGATAAAGCTCCCATTTTTACCTTCCCAATTCCATTTTACTAA

Coding sequence (CDS)

ATGGGGTTTCGAAATGAGTCGCAGTCAACGGGAACTCAAAATGATTTTCTTATGGGATTTCAAAACAATATTGATCCCCATGCGATGGGAAGGAGATTCGGTTTGAAGTTTCAGCTTCCTCCTGAGGCAATTACAAGCTCACGCGCGCAGCTTTTGATTCCACCTTCGGTAAATTTGCAATTTGGATGGGTCCCGTTTTCTTGTGCTGACATTTTGTTTACACTGACGTCGATGGAGAAATATCTGGTGGATTTTATGAACATGTCCATAAAAGATATGGATAAAGCTCCCATTTTTACCTTCCCAATTCCATTTTACTAA

Protein sequence

MGFRNESQSTGTQNDFLMGFQNNIDPHAMGRRFGLKFQLPPEAITSSRAQLLIPPSVNLQFGWVPFSCADILFTLTSMEKYLVDFMNMSIKDMDKAPIFTFPIPFY*
Homology
[Close]
BLAST of Chy3G064140 vs. NCBI nr
Match: KAE8652112.1 (hypothetical protein Csa_022556 [Cucumis sativus])

HSP 1 Score: 210 bits (535), Expect = 1.77e-68
Identity = 101/106 (95.28%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MGFRNESQSTGTQNDFLMGFQNNIDPHAMGRRFGLKFQLPPEAITSSRAQLLIPPSVNLQ 60
           MG RNESQST TQNDFLMG QN IDPHAMGRRFGLKFQLPPEAITSSRAQLLIPPSVNLQ
Sbjct: 1   MGLRNESQSTRTQNDFLMGIQNKIDPHAMGRRFGLKFQLPPEAITSSRAQLLIPPSVNLQ 60

Query: 61  FGWVPFSCADILFTLTSMEKYLVDFMNMSIKDMDKAPIFTFPIPFY 106
           FGWVPFSCADILFTLTSMEKYLVDF+NMSIKDMDKAPIFTFPIPFY
Sbjct: 61  FGWVPFSCADILFTLTSMEKYLVDFVNMSIKDMDKAPIFTFPIPFY 106

The following BLAST results are available for this feature:
BLAST of Chy3G064140 vs.
Match NameE-valueIdentityDescription
BLAST of Chy3G064140 vs.
Match NameE-valueIdentityDescription
BLAST of Chy3G064140 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652112.11.77e-6895.28hypothetical protein Csa_022556 [Cucumis sativus][more]
BLAST of Chy3G064140 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G064140.1Chy3G064140.1mRNA