Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAAGAACAACTTGAAATATCATGCGGCGGCGCCAATGGCTAGATCCTCCAACCCCGGCCGCTGTAGAGCCGGCGTCGGCGGCGCCAGCTCTCATTGCCGGAAACACCCAAAACACAAACAATCACCTGGGGTTTGCTCTGTTTGTCTAAGAGAAAAGCTCTGTAATTTGACCATTACTAAAACACCCTCTTCCTCTTCCTCTTCGAAAATATTACCTTCTTTTTCATCTTCTTCCTTGTCATCTTTATCCTCTTATTACTCATCTTCATCTCCTTCTTCTTCTTCTTCACCCTATTCTTCAACAAAAAAACCTTCAGTTTCTTCCATGTCCAGCTTGTTATTCAAGAGAAGATGGTCATCCTCCTCGTCCTCATCAACAACAGCAACAACAAACACTAATTTCTTTACAGCCGCTGATGCTGATCATCATCGTATAAACAACAAATCCCATGATGGGTTTTGGTCTAAATTGATGATGAATCGAAGAGGAAAAGAAATTATTGTTGAAGAAATTACTTTGAGGTGCTCTTCAACTTCTACAACAACAGATCATCAAACAATTACTACTACTACCTAG
mRNA sequence
ATGCCAAAGAACAACTTGAAATATCATGCGGCGGCGCCAATGGCTAGATCCTCCAACCCCGGCCGCTGTAGAGCCGGCGTCGGCGGCGCCAGCTCTCATTGCCGGAAACACCCAAAACACAAACAATCACCTGGGGTTTGCTCTGTTTGTCTAAGAGAAAAGCTCTGTAATTTGACCATTACTAAAACACCCTCTTCCTCTTCCTCTTCGAAAATATTACCTTCTTTTTCATCTTCTTCCTTGTCATCTTTATCCTCTTATTACTCATCTTCATCTCCTTCTTCTTCTTCTTCACCCTATTCTTCAACAAAAAAACCTTCAGTTTCTTCCATGTCCAGCTTGTTATTCAAGAGAAGATGGTCATCCTCCTCGTCCTCATCAACAACAGCAACAACAAACACTAATTTCTTTACAGCCGCTGATGCTGATCATCATCGTATAAACAACAAATCCCATGATGGGTTTTGGTCTAAATTGATGATGAATCGAAGAGGAAAAGAAATTATTGTTGAAGAAATTACTTTGAGGTGCTCTTCAACTTCTACAACAACAGATCATCAAACAATTACTACTACTACCTAG
Coding sequence (CDS)
ATGCCAAAGAACAACTTGAAATATCATGCGGCGGCGCCAATGGCTAGATCCTCCAACCCCGGCCGCTGTAGAGCCGGCGTCGGCGGCGCCAGCTCTCATTGCCGGAAACACCCAAAACACAAACAATCACCTGGGGTTTGCTCTGTTTGTCTAAGAGAAAAGCTCTGTAATTTGACCATTACTAAAACACCCTCTTCCTCTTCCTCTTCGAAAATATTACCTTCTTTTTCATCTTCTTCCTTGTCATCTTTATCCTCTTATTACTCATCTTCATCTCCTTCTTCTTCTTCTTCACCCTATTCTTCAACAAAAAAACCTTCAGTTTCTTCCATGTCCAGCTTGTTATTCAAGAGAAGATGGTCATCCTCCTCGTCCTCATCAACAACAGCAACAACAAACACTAATTTCTTTACAGCCGCTGATGCTGATCATCATCGTATAAACAACAAATCCCATGATGGGTTTTGGTCTAAATTGATGATGAATCGAAGAGGAAAAGAAATTATTGTTGAAGAAATTACTTTGAGGTGCTCTTCAACTTCTACAACAACAGATCATCAAACAATTACTACTACTACCTAG
Protein sequence
MPKNNLKYHAAAPMARSSNPGRCRAGVGGASSHCRKHPKHKQSPGVCSVCLREKLCNLTITKTPSSSSSSKILPSFSSSSLSSLSSYYSSSSPSSSSSPYSSTKKPSVSSMSSLLFKRRWSSSSSSSTTATTNTNFFTAADADHHRINNKSHDGFWSKLMMNRRGKEIIVEEITLRCSSTSTTTDHQTITTTT*
Homology
BLAST of Chy3G063280 vs. ExPASy TrEMBL
Match:
A0A0A0LPJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369140 PE=4 SV=1)
HSP 1 Score: 325.9 bits (834), Expect = 1.2e-85
Identity = 185/198 (93.43%), Postives = 187/198 (94.44%), Query Frame = 0
Query: 1 MPKNNLKYHAAAPMARSSNPGRCRAGV-----GGASSHCRKHPKHKQSPGVCSVCLREKL 60
MPKNNLKYHAAAPMARSSN GRCRAGV G SSHCRKHPKHKQSPGVCSVCLREKL
Sbjct: 1 MPKNNLKYHAAAPMARSSNHGRCRAGVGVVGGGNGSSHCRKHPKHKQSPGVCSVCLREKL 60
Query: 61 CNLTITKTPSSSSSSKILPSFSSSSLSSLSSYYSSSSPSSSSSPYSSTKKPSVSSMSSLL 120
CNLTIT+TPSSSSSSKILPSFSSSSLSSLSSYYSSSSPSSSSSPYSSTKKPSVSSMSSLL
Sbjct: 61 CNLTITRTPSSSSSSKILPSFSSSSLSSLSSYYSSSSPSSSSSPYSSTKKPSVSSMSSLL 120
Query: 121 FKRRWSSSSSSSTTATTNTNFFTAADADHHRINNKSHDGFWSKLMMNRRGKEIIVEEITL 180
FKRRWSSSSSSSTTATTNTNFFTAADA HHRINNKSH GFWSKLMMNRRGKEIIVE+ITL
Sbjct: 121 FKRRWSSSSSSSTTATTNTNFFTAADAHHHRINNKSHHGFWSKLMMNRRGKEIIVEQITL 180
Query: 181 RCSSTSTTTDHQTITTTT 194
RCSSTSTTTDHQTITT T
Sbjct: 181 RCSSTSTTTDHQTITTPT 198
BLAST of Chy3G063280 vs. ExPASy TrEMBL
Match:
A0A1S3BC83 (uncharacterized serine-rich protein C215.13-like OS=Cucumis melo OX=3656 GN=LOC103488084 PE=4 SV=1)
HSP 1 Score: 274.2 bits (700), Expect = 4.1e-70
Identity = 171/200 (85.50%), Postives = 173/200 (86.50%), Query Frame = 0
Query: 1 MPKNN------LKYHAAAPMARSSNPGRCRAGVGGASSHCRKHPKHKQSPGVCSVCLREK 60
MPKNN LKYHAAAPMARSSN G CR GG S CRKHPKHKQSPGVCSVCLREK
Sbjct: 1 MPKNNLMITSKLKYHAAAPMARSSNHGGCR---GGGVSQCRKHPKHKQSPGVCSVCLREK 60
Query: 61 LCNLTITKTP--SSSSSSKILPSFSSSSLSSLSSYYSSSSPSSSSSPYSSTKKPSVSSMS 120
LCNLTITKTP SSSSSSKILPSFSSSSLSSLSSYYSSSSPSSSSSPY STKKPS+SSMS
Sbjct: 61 LCNLTITKTPPSSSSSSSKILPSFSSSSLSSLSSYYSSSSPSSSSSPYFSTKKPSISSMS 120
Query: 121 SLLFKRRWSSSSSSSTTATTNTNFFTAADADHHRINNKS-HDGFWSKLMMNRRGKEIIVE 180
SLLFKRRWSSS SSS+TATTNTNFF HHR NNKS HDGFWSKLMMNRRGKE IVE
Sbjct: 121 SLLFKRRWSSSLSSSSTATTNTNFF-----GHHRNNNKSGHDGFWSKLMMNRRGKE-IVE 180
Query: 181 EITLRCSSTSTTTDHQTITT 192
EITLRCSSTSTTTDHQTITT
Sbjct: 181 EITLRCSSTSTTTDHQTITT 191
BLAST of Chy3G063280 vs. ExPASy TrEMBL
Match:
A0A6J1BSJ2 (uncharacterized protein LOC111004952 OS=Momordica charantia OX=3673 GN=LOC111004952 PE=4 SV=1)
HSP 1 Score: 90.1 bits (222), Expect = 1.1e-14
Identity = 92/190 (48.42%), Postives = 113/190 (59.47%), Query Frame = 0
Query: 1 MPKN--NLKYHAAAPMARSSNPGRCRAGVGGASSHCRKHPKHKQSPGVCSVCLREKLCNL 60
M KN LK HAAA MAR+ ++ +GG CRKHPKH+QSPGVCS+CLREKL L
Sbjct: 1 MAKNLRKLKDHAAAAMARAR-----KSSIGG-GGRCRKHPKHQQSPGVCSLCLREKLSQL 60
Query: 61 TITKTPSSSSSSKILPSFSSSSLSSLSSYYSSSSPSS--SSSPYSSTKKPSVSSMSSLLF 120
T S++ KI S SSSSLSS+SS YSS+S +S SS P +K S+S MSS LF
Sbjct: 61 LNTDY-HGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIRRKRSISGMSS-LF 120
Query: 121 KRRWSSSSSSSTTATTNTNFFTAADADHHRINNKSHDGFWSKLMMNRRGKEIIVEEITLR 180
KRR S+++ S++ + DG WSKL++NRRGK E TLR
Sbjct: 121 KRRSSANNLLSSSRSL-------------------ADGLWSKLVVNRRGK-----EQTLR 157
Query: 181 CSSTSTTTDH 187
S STTTDH
Sbjct: 181 -RSASTTTDH 157
BLAST of Chy3G063280 vs. ExPASy TrEMBL
Match:
F6H0X5 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g06400 PE=4 SV=1)
HSP 1 Score: 68.9 bits (167), Expect = 2.6e-08
Identity = 72/162 (44.44%), Postives = 91/162 (56.17%), Query Frame = 0
Query: 22 RCRAGVGGASSH---CRKHPKHKQSPGVCSVCLREKLCNLTITKTPSSSSSSKILPSFSS 81
R R +GG S CRKHPKH+QSPGVCS+CLRE+L L+ T S S+S+ + + SS
Sbjct: 6 RSRDQMGGRSKSEVLCRKHPKHRQSPGVCSICLRERLSQLS---TSSRSASTTVASASSS 65
Query: 82 SSLSSLSSYYSSSSPSSSSSPYSSTK--KPSVSSMSSLLFKRRWSSSSSSSTTATTNTNF 141
SSLSS SS+YSSS SS SSP + + S S LL + + S S T
Sbjct: 66 SSLSSYSSHYSSSEASSCSSPMQRYRFDSDAKGSFSFLLSGKNMLTKSRSVAFVTR---- 125
Query: 142 FTAADADHHRINNKSHDGFWSKLMMNR--RGKEIIVEEITLR 177
A DA N KS GFWSKL+ R R +E++V T+R
Sbjct: 126 MRAGDASQR--NKKS--GFWSKLLRPRAKRTEEVLVYSRTVR 156
BLAST of Chy3G063280 vs. ExPASy TrEMBL
Match:
A5AXC1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_004929 PE=4 SV=1)
HSP 1 Score: 67.8 bits (164), Expect = 5.8e-08
Identity = 70/162 (43.21%), Postives = 90/162 (55.56%), Query Frame = 0
Query: 22 RCRAGVGGASSH---CRKHPKHKQSPGVCSVCLREKLCNLTITKTPSSSSSSKILPSFSS 81
R R +GG S CRKHPKH+QSPGVCS+CLRE+L L+ T S S+S+ + + SS
Sbjct: 6 RSRDQMGGRSKSEVLCRKHPKHRQSPGVCSICLRERLSQLS---TSSRSASTTVASASSS 65
Query: 82 SSLSSLSSYYSSSSPSSSSSPYSSTK--KPSVSSMSSLLFKRRWSSSSSSSTTATTNTNF 141
SSLSS SS+YSSS SS SSP + + S S LL + + S S T
Sbjct: 66 SSLSSYSSHYSSSEASSCSSPMQRYRFDSDAKGSFSFLLSGKNMLTKSRSVAFVT----- 125
Query: 142 FTAADADHHRINNKSHDGFWSKLMMNR--RGKEIIVEEITLR 177
D + N KS GFWSKL+ R R +E++V T+R
Sbjct: 126 -RMRXGDAXQRNKKS--GFWSKLLRPRAKRTEEVLVYSRTVR 156
BLAST of Chy3G063280 vs. NCBI nr
Match:
XP_031736533.1 (uncharacterized serine-rich protein C215.13-like [Cucumis sativus] >KGN62712.1 hypothetical protein Csa_021850 [Cucumis sativus])
HSP 1 Score: 326 bits (836), Expect = 1.75e-111
Identity = 184/196 (93.88%), Postives = 186/196 (94.90%), Query Frame = 0
Query: 1 MPKNNLKYHAAAPMARSSNPGRCRAGVG-----GASSHCRKHPKHKQSPGVCSVCLREKL 60
MPKNNLKYHAAAPMARSSN GRCRAGVG SSHCRKHPKHKQSPGVCSVCLREKL
Sbjct: 1 MPKNNLKYHAAAPMARSSNHGRCRAGVGVVGGGNGSSHCRKHPKHKQSPGVCSVCLREKL 60
Query: 61 CNLTITKTPSSSSSSKILPSFSSSSLSSLSSYYSSSSPSSSSSPYSSTKKPSVSSMSSLL 120
CNLTIT+TPSSSSSSKILPSFSSSSLSSLSSYYSSSSPSSSSSPYSSTKKPSVSSMSSLL
Sbjct: 61 CNLTITRTPSSSSSSKILPSFSSSSLSSLSSYYSSSSPSSSSSPYSSTKKPSVSSMSSLL 120
Query: 121 FKRRWSSSSSSSTTATTNTNFFTAADADHHRINNKSHDGFWSKLMMNRRGKEIIVEEITL 180
FKRRWSSSSSSSTTATTNTNFFTAADA HHRINNKSH GFWSKLMMNRRGKEIIVE+ITL
Sbjct: 121 FKRRWSSSSSSSTTATTNTNFFTAADAHHHRINNKSHHGFWSKLMMNRRGKEIIVEQITL 180
Query: 181 RCSSTSTTTDHQTITT 191
RCSSTSTTTDHQTITT
Sbjct: 181 RCSSTSTTTDHQTITT 196
BLAST of Chy3G063280 vs. NCBI nr
Match:
XP_008444863.1 (PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo])
HSP 1 Score: 275 bits (702), Expect = 3.66e-91
Identity = 171/200 (85.50%), Postives = 173/200 (86.50%), Query Frame = 0
Query: 1 MPKNNL------KYHAAAPMARSSNPGRCRAGVGGASSHCRKHPKHKQSPGVCSVCLREK 60
MPKNNL KYHAAAPMARSSN G CR GG S CRKHPKHKQSPGVCSVCLREK
Sbjct: 1 MPKNNLMITSKLKYHAAAPMARSSNHGGCR---GGGVSQCRKHPKHKQSPGVCSVCLREK 60
Query: 61 LCNLTITKTP--SSSSSSKILPSFSSSSLSSLSSYYSSSSPSSSSSPYSSTKKPSVSSMS 120
LCNLTITKTP SSSSSSKILPSFSSSSLSSLSSYYSSSSPSSSSSPY STKKPS+SSMS
Sbjct: 61 LCNLTITKTPPSSSSSSSKILPSFSSSSLSSLSSYYSSSSPSSSSSPYFSTKKPSISSMS 120
Query: 121 SLLFKRRWSSSSSSSTTATTNTNFFTAADADHHRINNKS-HDGFWSKLMMNRRGKEIIVE 180
SLLFKRRWSSS SSS+TATTNTNFF HHR NNKS HDGFWSKLMMNRRGKEI VE
Sbjct: 121 SLLFKRRWSSSLSSSSTATTNTNFF-----GHHRNNNKSGHDGFWSKLMMNRRGKEI-VE 180
Query: 181 EITLRCSSTSTTTDHQTITT 191
EITLRCSSTSTTTDHQTITT
Sbjct: 181 EITLRCSSTSTTTDHQTITT 191
BLAST of Chy3G063280 vs. NCBI nr
Match:
KAG6598702.1 (hypothetical protein SDJN03_08480, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 108 bits (271), Expect = 2.30e-26
Identity = 87/171 (50.88%), Postives = 99/171 (57.89%), Query Frame = 0
Query: 1 MPKN--NLKYHAAAPMARSSNPGRCRAGVGGASSHCRKHPKHKQSPGVCSVCLREKLCNL 60
MPKN LK H AA A + SS CRKHPKHKQSPGVCS+CLREKL NL
Sbjct: 1 MPKNLSKLKRHTAAATAAAKGRNPNHGSDSSNSSRCRKHPKHKQSPGVCSLCLREKLSNL 60
Query: 61 TITKTPSSSSSSKILPSFSSSSLSSLSSYYSSSSPSSSSSPYSSTKKPSVSSMSSLLFKR 120
TITK ++ ++ S SSSSLSSLSSYYSSS PSSS+SPY K S+SS LFKR
Sbjct: 61 TITKPVMAAETAA---SVSSSSLSSLSSYYSSSFPSSSASPYFPRTKSSISS----LFKR 120
Query: 121 RWSSSSSSSTTATTNTNFFTAADADHHRINNKSHDGFWSKLMMNRRGKEII 169
R S+ T TN GFWSKLMMNRR K+++
Sbjct: 121 R------STPTQATN-------------------PGFWSKLMMNRRPKQLV 139
BLAST of Chy3G063280 vs. NCBI nr
Match:
KAG7029644.1 (hypothetical protein SDJN02_07984, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 107 bits (268), Expect = 6.47e-26
Identity = 87/171 (50.88%), Postives = 99/171 (57.89%), Query Frame = 0
Query: 1 MPKN--NLKYHAAAPMARSSNPGRCRAGVGGASSHCRKHPKHKQSPGVCSVCLREKLCNL 60
MPKN LK H AA A + SS CRKHPKHKQSPGVCS+CLREKL NL
Sbjct: 1 MPKNLRKLKGHTAAATAAAKGRKPNHGSGSSNSSRCRKHPKHKQSPGVCSLCLREKLSNL 60
Query: 61 TITKTPSSSSSSKILPSFSSSSLSSLSSYYSSSSPSSSSSPYSSTKKPSVSSMSSLLFKR 120
TITK ++ ++ S SSSSLSSLSSYYSSS PSSS+SPY K S+SS LFKR
Sbjct: 61 TITKPVMAAETAA---SVSSSSLSSLSSYYSSSFPSSSASPYFPRTKSSISS----LFKR 120
Query: 121 RWSSSSSSSTTATTNTNFFTAADADHHRINNKSHDGFWSKLMMNRRGKEII 169
R S+ T TN GFWSKLMMNRR K+++
Sbjct: 121 R------STPTQATN-------------------PGFWSKLMMNRRPKQLV 139
BLAST of Chy3G063280 vs. NCBI nr
Match:
XP_022131967.1 (uncharacterized protein LOC111004952 [Momordica charantia])
HSP 1 Score: 92.8 bits (229), Expect = 5.90e-20
Identity = 95/193 (49.22%), Postives = 114/193 (59.07%), Query Frame = 0
Query: 1 MPKN--NLKYHAAAPMARSSNPGRCRAGVGGASSHCRKHPKHKQSPGVCSVCLREKLCNL 60
M KN LK HAAA MAR+ ++ +GG CRKHPKH+QSPGVCS+CLREKL L
Sbjct: 1 MAKNLRKLKDHAAAAMARAR-----KSSIGG-GGRCRKHPKHQQSPGVCSLCLREKLSQL 60
Query: 61 TITKTPSSSSSSKILPSFSSSSLSSLSSYYSSSSPSSSSS--PYSSTKKPSVSSMSSLLF 120
T S++ KI S SSSSLSS+SS YSS+S +SS S P +K S+S MSSL F
Sbjct: 61 LNTDYHGSTAP-KIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIRRKRSISGMSSL-F 120
Query: 121 KRRWSSS---SSSSTTATTNTNFFTAADADHHRINNKSHDGFWSKLMMNRRGKEIIVEEI 180
KRR S++ SSS + A DG WSKL++NRRGKE
Sbjct: 121 KRRSSANNLLSSSRSLA----------------------DGLWSKLVVNRRGKEQ----- 157
Query: 181 TLRCSSTSTTTDH 186
TLR S+ STTTDH
Sbjct: 181 TLRRSA-STTTDH 157
BLAST of Chy3G063280 vs. TAIR 10
Match:
AT1G72240.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22470.1); Has 65 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 45.4 bits (106), Expect = 5.9e-05
Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 0
Query: 34 CRKHPKHKQSPGVCSVCLREKLCNLTI---TKTPSSSSSSKILPSFSSSSLSSLSSYYSS 93
C+KH KH+QSPG+CS+CL E+L L++ T + ++ S S+SS SS+SS YSS
Sbjct: 24 CKKHTKHRQSPGICSLCLTERLSKLSLEYYDYTKKAVETATYCGSTSTSSSSSVSSCYSS 83
Query: 94 SSPSSSSSP--YSSTKKPSVSSMSSLLFK 118
SS SS SSP Y +K S LF+
Sbjct: 84 SSVSSCSSPLQYRYREKKKDGKKQSFLFR 112
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LPJ0 | 1.2e-85 | 93.43 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369140 PE=4 SV=1 | [more] |
A0A1S3BC83 | 4.1e-70 | 85.50 | uncharacterized serine-rich protein C215.13-like OS=Cucumis melo OX=3656 GN=LOC1... | [more] |
A0A6J1BSJ2 | 1.1e-14 | 48.42 | uncharacterized protein LOC111004952 OS=Momordica charantia OX=3673 GN=LOC111004... | [more] |
F6H0X5 | 2.6e-08 | 44.44 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g06400 PE=4 SV=... | [more] |
A5AXC1 | 5.8e-08 | 43.21 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_004929 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_031736533.1 | 1.75e-111 | 93.88 | uncharacterized serine-rich protein C215.13-like [Cucumis sativus] >KGN62712.1 h... | [more] |
XP_008444863.1 | 3.66e-91 | 85.50 | PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo] | [more] |
KAG6598702.1 | 2.30e-26 | 50.88 | hypothetical protein SDJN03_08480, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7029644.1 | 6.47e-26 | 50.88 | hypothetical protein SDJN02_07984, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022131967.1 | 5.90e-20 | 49.22 | uncharacterized protein LOC111004952 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
AT1G72240.1 | 5.9e-05 | 44.94 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |