Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGGATCCAAATCCCAGTCTGAGTGCTGCATGTGTGGAGATTTTGGTTTCTCTTTTGAGCTTTTTCACTGCAAAATTTGCCAATTCAGATCCCAACACAGGCAAAACTTTCTTCCATTTCTTTAACCCTCCCCCCCCCCCCCCCCCCCCCCCGTTCTTCTCTTTTCAATTTCAATTTCTTTTTCTTCCTCTTAATTCTCAGGTACTGTAGCAATTTGTATCCCAAAGCCGATTGTTACCGAATTTGCAATTGGTGCCTAACTCTAAACCAAGAATCAAACCCCAAATCCCCAAATTCTTCTTCCTCCATCATCAACAACAACGATCGATTCCCCAATTTTCGATCTCAACTCAACAAACCCATCAAAAAACAAACCTCCTCCTCTCTAGTAACTTTGCCTCCTCCTCCTCCTCCTCCTCTTCCGCCTCGCCGGAGACTCATTTCCGTGGATGAAAAACTCCGGCGGACTAGATCGGAGGAGATTTCCCACCGGAATGGGATCAAGCGGCCCGTCATCTTTAGGAATAAGGTCAGAAGGTACAAACTTCTGGACGAGGTTTCCAGCTGA
mRNA sequence
ATGACAGGATCCAAATCCCAGTCTGAGTGCTGCATGTGTGGAGATTTTGGTTTCTCTTTTGAGCTTTTTCACTGCAAAATTTGCCAATTCAGATCCCAACACAGGTACTGTAGCAATTTGTATCCCAAAGCCGATTGTTACCGAATTTGCAATTGGTGCCTAACTCTAAACCAAGAATCAAACCCCAAATCCCCAAATTCTTCTTCCTCCATCATCAACAACAACGATCGATTCCCCAATTTTCGATCTCAACTCAACAAACCCATCAAAAAACAAACCTCCTCCTCTCTAGTAACTTTGCCTCCTCCTCCTCCTCCTCCTCTTCCGCCTCGCCGGAGACTCATTTCCGTGGATGAAAAACTCCGGCGGACTAGATCGGAGGAGATTTCCCACCGGAATGGGATCAAGCGGCCCGTCATCTTTAGGAATAAGGTCAGAAGGTACAAACTTCTGGACGAGGTTTCCAGCTGA
Coding sequence (CDS)
ATGACAGGATCCAAATCCCAGTCTGAGTGCTGCATGTGTGGAGATTTTGGTTTCTCTTTTGAGCTTTTTCACTGCAAAATTTGCCAATTCAGATCCCAACACAGGTACTGTAGCAATTTGTATCCCAAAGCCGATTGTTACCGAATTTGCAATTGGTGCCTAACTCTAAACCAAGAATCAAACCCCAAATCCCCAAATTCTTCTTCCTCCATCATCAACAACAACGATCGATTCCCCAATTTTCGATCTCAACTCAACAAACCCATCAAAAAACAAACCTCCTCCTCTCTAGTAACTTTGCCTCCTCCTCCTCCTCCTCCTCTTCCGCCTCGCCGGAGACTCATTTCCGTGGATGAAAAACTCCGGCGGACTAGATCGGAGGAGATTTCCCACCGGAATGGGATCAAGCGGCCCGTCATCTTTAGGAATAAGGTCAGAAGGTACAAACTTCTGGACGAGGTTTCCAGCTGA
Protein sequence
MTGSKSQSECCMCGDFGFSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTLNQESNPKSPNSSSSIINNNDRFPNFRSQLNKPIKKQTSSSLVTLPPPPPPPLPPRRRLISVDEKLRRTRSEEISHRNGIKRPVIFRNKVRRYKLLDEVSS*
Homology
BLAST of Chy3G063080 vs. ExPASy TrEMBL
Match:
A0A0A0LLR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369840 PE=4 SV=1)
HSP 1 Score: 308.5 bits (789), Expect = 1.6e-80
Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 0
Query: 1 MTGSKSQSECCMCGDFGFSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTLNQES 60
MTGSKSQSECCMCGDFGFSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTLNQES
Sbjct: 1 MTGSKSQSECCMCGDFGFSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTLNQES 60
Query: 61 NPKSPNSSSSIINNNDRFPNFRSQLNKPIKKQTSSSLVTLPPPPPPPLPPRRRLISVDEK 120
NPKSPNSSSSIINNND+FPNFRSQLNKPIKKQ+SSSLV LPPPPPPP PPRRRLISVDEK
Sbjct: 61 NPKSPNSSSSIINNNDQFPNFRSQLNKPIKKQSSSSLVILPPPPPPP-PPRRRLISVDEK 120
Query: 121 LRRTRSEEISHRNGIKRPVIFRNKVRRYKLLDEVSS 157
LRRTRSEEISHR GIKRPVIFRNKVRRYKLLDEVSS
Sbjct: 121 LRRTRSEEISHRTGIKRPVIFRNKVRRYKLLDEVSS 155
BLAST of Chy3G063080 vs. ExPASy TrEMBL
Match:
A0A1S3BCA2 (uncharacterized protein LOC103488103 OS=Cucumis melo OX=3656 GN=LOC103488103 PE=4 SV=1)
HSP 1 Score: 297.7 bits (761), Expect = 2.8e-77
Identity = 146/157 (92.99%), Postives = 150/157 (95.54%), Query Frame = 0
Query: 1 MTGSKSQSECCMCGDFGFSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTLNQES 60
MTGSKSQSECC CGDFG SFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLT NQES
Sbjct: 1 MTGSKSQSECCTCGDFGLSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTQNQES 60
Query: 61 NPKSPNSSSS-IINNNDRFPNFRSQLNKPIKKQTSSSLVTLPPPPPPPLPPRRRLISVDE 120
NPKSPNSSSS IINNND+FPNFRS+LNKPIKKQ+SSSLV LPPPPPPP PPRRRLISVD+
Sbjct: 61 NPKSPNSSSSPIINNNDQFPNFRSRLNKPIKKQSSSSLVILPPPPPPPPPPRRRLISVDD 120
Query: 121 KLRRTRSEEISHRNGIKRPVIFRNKVRRYKLLDEVSS 157
KLRRTRSEEISHR GIKRPVIFRNKVRRYKLLDEVSS
Sbjct: 121 KLRRTRSEEISHRTGIKRPVIFRNKVRRYKLLDEVSS 157
BLAST of Chy3G063080 vs. ExPASy TrEMBL
Match:
A0A6J1KQ08 (uncharacterized protein LOC111496564 OS=Cucurbita maxima OX=3661 GN=LOC111496564 PE=4 SV=1)
HSP 1 Score: 220.3 bits (560), Expect = 5.6e-54
Identity = 113/166 (68.07%), Postives = 127/166 (76.51%), Query Frame = 0
Query: 4 SKSQSECCMCGDFGFSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTLNQESNPK 63
S S++ECCMCGDFGFS ELF CKICQFRSQHRYCSNLYPKADCYRICNWCLT +ES K
Sbjct: 10 SPSEAECCMCGDFGFSDELFRCKICQFRSQHRYCSNLYPKADCYRICNWCLTQKEESKAK 69
Query: 64 SPNSS-SSIINNNDRFPNFRSQLNK------------PIKKQTSSSLVTLPPPPPPPLPP 123
SPNSS SS ++ D + + ++ NK PIKKQ S P PPPPP PP
Sbjct: 70 SPNSSNSSSLSTRDDYSSIKTPRNKDQIRTFLPLQTRPIKKQRSPEASERPQPPPPPPPP 129
Query: 124 RRRLISVDEKLRRTRSEEISHRNGIKRPVIFRNKVRRYKLLDEVSS 157
RR+ I+V+E LRRTRSEEISHR+GI+RPVIFRNKVRRYKLLDEVSS
Sbjct: 130 RRKPIAVEENLRRTRSEEISHRSGIQRPVIFRNKVRRYKLLDEVSS 175
BLAST of Chy3G063080 vs. ExPASy TrEMBL
Match:
A0A6J1BR47 (uncharacterized protein LOC111005007 OS=Momordica charantia OX=3673 GN=LOC111005007 PE=4 SV=1)
HSP 1 Score: 217.2 bits (552), Expect = 4.8e-53
Identity = 109/169 (64.50%), Postives = 125/169 (73.96%), Query Frame = 0
Query: 9 ECCMCGDFGFSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTLNQESNPKSPNSS 68
ECCMCGDFGFS+ELF CKICQ+RSQHRYCSNLYPKA+CYRICNWCL+ +ES KSPNSS
Sbjct: 18 ECCMCGDFGFSYELFQCKICQYRSQHRYCSNLYPKAECYRICNWCLSQKEESKAKSPNSS 77
Query: 69 SSII---------------------NNNDRFPNFRSQLNKPIKKQTSSSLVTLPPPPPPP 128
+S +N D+ F+SQ N+PIKKQ S ++ PPPPPPP
Sbjct: 78 NSSTSNKAQNSSGRDDYSSIKKPRNSNKDQIRTFQSQENRPIKKQRSPEVLPPPPPPPPP 137
Query: 129 LPPRRRLISVDEKLRRTRSEEISHRNGIKRPVIFRNKVRRYKLLDEVSS 157
RRR ++VD+ LRRTRSEEISHR GI+RPVIFRNKVRRYKLLDEVSS
Sbjct: 138 PQARRRPVAVDDTLRRTRSEEISHRTGIQRPVIFRNKVRRYKLLDEVSS 186
BLAST of Chy3G063080 vs. ExPASy TrEMBL
Match:
A0A6J1GHL7 (uncharacterized protein LOC111454013 OS=Cucurbita moschata OX=3662 GN=LOC111454013 PE=4 SV=1)
HSP 1 Score: 214.2 bits (544), Expect = 4.0e-52
Identity = 111/166 (66.87%), Postives = 123/166 (74.10%), Query Frame = 0
Query: 4 SKSQSECCMCGDFGFSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTLNQESNPK 63
S S++ECCMCGDFGFS ELF CKICQFRSQHRYCSNLYPKADCYRICNWCLT +ES K
Sbjct: 11 SPSEAECCMCGDFGFSDELFRCKICQFRSQHRYCSNLYPKADCYRICNWCLTQKEESKAK 70
Query: 64 SPNSSSS-------------IINNNDRFPNFRSQLNKPIKKQTSSSLVTLPPPPPPPLPP 123
SPNSS+S N D+ F +PIKKQ S P PPPPP PP
Sbjct: 71 SPNSSNSSSLTTRDDHSSIKTPRNKDQIRTFLPLQTRPIKKQRSPEASERPQPPPPP-PP 130
Query: 124 RRRLISVDEKLRRTRSEEISHRNGIKRPVIFRNKVRRYKLLDEVSS 157
RR+ I+V++ LRRTRSEEISHR+GI+RPVIFRNKVRRYKLLDEVSS
Sbjct: 131 RRKPIAVEDNLRRTRSEEISHRSGIQRPVIFRNKVRRYKLLDEVSS 175
BLAST of Chy3G063080 vs. NCBI nr
Match:
XP_004152611.1 (uncharacterized protein LOC101216451 [Cucumis sativus] >KGN62733.1 hypothetical protein Csa_022062 [Cucumis sativus])
HSP 1 Score: 306 bits (784), Expect = 7.41e-105
Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 0
Query: 1 MTGSKSQSECCMCGDFGFSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTLNQES 60
MTGSKSQSECCMCGDFGFSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTLNQES
Sbjct: 1 MTGSKSQSECCMCGDFGFSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTLNQES 60
Query: 61 NPKSPNSSSSIINNNDRFPNFRSQLNKPIKKQTSSSLVTLPPPPPPPLPPRRRLISVDEK 120
NPKSPNSSSSIINNND+FPNFRSQLNKPIKKQ+SSSLV LPPPPPPP PPRRRLISVDEK
Sbjct: 61 NPKSPNSSSSIINNNDQFPNFRSQLNKPIKKQSSSSLVILPPPPPPP-PPRRRLISVDEK 120
Query: 121 LRRTRSEEISHRNGIKRPVIFRNKVRRYKLLDEVSS 156
LRRTRSEEISHR GIKRPVIFRNKVRRYKLLDEVSS
Sbjct: 121 LRRTRSEEISHRTGIKRPVIFRNKVRRYKLLDEVSS 155
BLAST of Chy3G063080 vs. NCBI nr
Match:
XP_008444888.1 (PREDICTED: uncharacterized protein LOC103488103 [Cucumis melo])
HSP 1 Score: 295 bits (756), Expect = 1.48e-100
Identity = 146/157 (92.99%), Postives = 150/157 (95.54%), Query Frame = 0
Query: 1 MTGSKSQSECCMCGDFGFSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTLNQES 60
MTGSKSQSECC CGDFG SFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLT NQES
Sbjct: 1 MTGSKSQSECCTCGDFGLSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTQNQES 60
Query: 61 NPKSPNSSSS-IINNNDRFPNFRSQLNKPIKKQTSSSLVTLPPPPPPPLPPRRRLISVDE 120
NPKSPNSSSS IINNND+FPNFRS+LNKPIKKQ+SSSLV LPPPPPPP PPRRRLISVD+
Sbjct: 61 NPKSPNSSSSPIINNNDQFPNFRSRLNKPIKKQSSSSLVILPPPPPPPPPPRRRLISVDD 120
Query: 121 KLRRTRSEEISHRNGIKRPVIFRNKVRRYKLLDEVSS 156
KLRRTRSEEISHR GIKRPVIFRNKVRRYKLLDEVSS
Sbjct: 121 KLRRTRSEEISHRTGIKRPVIFRNKVRRYKLLDEVSS 157
BLAST of Chy3G063080 vs. NCBI nr
Match:
XP_038884359.1 (uncharacterized protein LOC120075221 [Benincasa hispida])
HSP 1 Score: 239 bits (610), Expect = 2.84e-78
Identity = 122/156 (78.21%), Postives = 133/156 (85.26%), Query Frame = 0
Query: 3 GSKSQSECCMCGDFGFSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTLNQESNP 62
GSKSQ+ECCMCGDFGFS+ELFHCKICQFRSQHRYCSNLYPKADCYRICNWCL +ESNP
Sbjct: 8 GSKSQAECCMCGDFGFSYELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLGQKEESNP 67
Query: 63 KSPNSSSSIINN--NDRFPNFRSQLNKPIKKQTSSSLVTLPPPPPPPLPPRRRLISVDEK 122
KSPNSSSS + P F+SQLNK IKKQ+S ++ LPPPPP PPRRR + +D+K
Sbjct: 68 KSPNSSSSNKPQITTHQIPTFQSQLNKLIKKQSSPEVI-LPPPPP---PPRRRPLPLDDK 127
Query: 123 LRRTRSEEISHRNGIKRPVIFRNKVRRYKLLDEVSS 156
LRRTRSEEISHR GIKRPVIFRNKVRRYKLLDEVSS
Sbjct: 128 LRRTRSEEISHRTGIKRPVIFRNKVRRYKLLDEVSS 159
BLAST of Chy3G063080 vs. NCBI nr
Match:
XP_023002810.1 (uncharacterized protein LOC111496564 [Cucurbita maxima])
HSP 1 Score: 218 bits (555), Expect = 1.14e-69
Identity = 113/166 (68.07%), Postives = 127/166 (76.51%), Query Frame = 0
Query: 4 SKSQSECCMCGDFGFSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTLNQESNPK 63
S S++ECCMCGDFGFS ELF CKICQFRSQHRYCSNLYPKADCYRICNWCLT +ES K
Sbjct: 10 SPSEAECCMCGDFGFSDELFRCKICQFRSQHRYCSNLYPKADCYRICNWCLTQKEESKAK 69
Query: 64 SPNSS-SSIINNNDRFPNFRSQLNK------------PIKKQTSSSLVTLPPPPPPPLPP 123
SPNSS SS ++ D + + ++ NK PIKKQ S P PPPPP PP
Sbjct: 70 SPNSSNSSSLSTRDDYSSIKTPRNKDQIRTFLPLQTRPIKKQRSPEASERPQPPPPPPPP 129
Query: 124 RRRLISVDEKLRRTRSEEISHRNGIKRPVIFRNKVRRYKLLDEVSS 156
RR+ I+V+E LRRTRSEEISHR+GI+RPVIFRNKVRRYKLLDEVSS
Sbjct: 130 RRKPIAVEENLRRTRSEEISHRSGIQRPVIFRNKVRRYKLLDEVSS 175
BLAST of Chy3G063080 vs. NCBI nr
Match:
XP_023537720.1 (uncharacterized protein LOC111798664 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 216 bits (550), Expect = 6.82e-69
Identity = 112/166 (67.47%), Postives = 122/166 (73.49%), Query Frame = 0
Query: 4 SKSQSECCMCGDFGFSFELFHCKICQFRSQHRYCSNLYPKADCYRICNWCLTLNQESNPK 63
S S+ ECCMCGDFGFS ELF CKICQFRSQHRYCSNLYPKADCYRICNWCLT +ES K
Sbjct: 11 SPSEPECCMCGDFGFSDELFRCKICQFRSQHRYCSNLYPKADCYRICNWCLTQKEESKAK 70
Query: 64 SPNSSSSII-------------NNNDRFPNFRSQLNKPIKKQTSSSLVTLPPPPPPPLPP 123
SPNSS+S N D+ F +PIKKQ S P PPPPP PP
Sbjct: 71 SPNSSNSSSLTTRDDHSSIKTPRNKDQIRTFLPLQTRPIKKQRSPEASERPQPPPPPPPP 130
Query: 124 RRRLISVDEKLRRTRSEEISHRNGIKRPVIFRNKVRRYKLLDEVSS 156
RR+ I+V+E LRRTRSEEISHR+GI+RPVIFRNKVRRYKLLDEVSS
Sbjct: 131 RRKPIAVEENLRRTRSEEISHRSGIQRPVIFRNKVRRYKLLDEVSS 176
BLAST of Chy3G063080 vs. TAIR 10
Match:
AT3G60520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02070.1); Has 107 Blast hits to 107 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 61.2 bits (147), Expect = 8.4e-10
Identity = 42/117 (35.90%), Postives = 57/117 (48.72%), Query Frame = 0
Query: 10 CCMCGDFGFSFELFHCKICQFRSQHRYCSNLY-PKADCYRICNWCLTLNQESNPKSPNSS 69
CCMCGD GF +LFHC C R QH YCS+ Y +AD +IC+WC + KS +
Sbjct: 9 CCMCGDVGFFDKLFHCSKCLNRFQHSYCSSYYKEQADPIKICDWC-----QCEAKSRTGA 68
Query: 70 SSIINNNDRFPNFRSQLNKP---IKKQTSSSLVTLPPPP---------PPPLPPRRR 114
+N ++RS+ + P IK+Q + + PP P P P RR
Sbjct: 69 KHGVNGGSSKRSYRSEYSSPHHQIKQQEINQTTSSSIPPAADKGKTGVPSPRPATRR 120
BLAST of Chy3G063080 vs. TAIR 10
Match:
AT1G02070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60520.1); Has 98 Blast hits to 98 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 58.2 bits (139), Expect = 7.1e-09
Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 0
Query: 10 CCMCGDFGFSFELFHCKICQFRSQHRYCSNLYPK-ADCYRICNWCLTLNQE--------- 69
CCMCGD GFS +LF C C+ R QH YCSN Y + A+ IC+WC + +++
Sbjct: 5 CCMCGDVGFSDKLFSCGHCRCRFQHSYCSNYYGQFAEPTEICDWCRSDDRKLSNVARHGG 64
Query: 70 SNPKSPNSS----SSIINNNDRFPNFRSQLN 87
S+ K P+SS + N ++ P R + N
Sbjct: 65 SSSKKPSSSVKYENDFSNRSEYSPGHRIKHN 95
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LLR8 | 1.6e-80 | 96.79 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369840 PE=4 SV=1 | [more] |
A0A1S3BCA2 | 2.8e-77 | 92.99 | uncharacterized protein LOC103488103 OS=Cucumis melo OX=3656 GN=LOC103488103 PE=... | [more] |
A0A6J1KQ08 | 5.6e-54 | 68.07 | uncharacterized protein LOC111496564 OS=Cucurbita maxima OX=3661 GN=LOC111496564... | [more] |
A0A6J1BR47 | 4.8e-53 | 64.50 | uncharacterized protein LOC111005007 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A6J1GHL7 | 4.0e-52 | 66.87 | uncharacterized protein LOC111454013 OS=Cucurbita moschata OX=3662 GN=LOC1114540... | [more] |
Match Name | E-value | Identity | Description | |
XP_004152611.1 | 7.41e-105 | 96.79 | uncharacterized protein LOC101216451 [Cucumis sativus] >KGN62733.1 hypothetical ... | [more] |
XP_008444888.1 | 1.48e-100 | 92.99 | PREDICTED: uncharacterized protein LOC103488103 [Cucumis melo] | [more] |
XP_038884359.1 | 2.84e-78 | 78.21 | uncharacterized protein LOC120075221 [Benincasa hispida] | [more] |
XP_023002810.1 | 1.14e-69 | 68.07 | uncharacterized protein LOC111496564 [Cucurbita maxima] | [more] |
XP_023537720.1 | 6.82e-69 | 67.47 | uncharacterized protein LOC111798664 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
AT3G60520.1 | 8.4e-10 | 35.90 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT1G02070.1 | 7.1e-09 | 38.46 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |