Chy3G063040 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G063040
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Protein CutA
Location	chrH03: 16233874 .. 16237591 (-)
RNA-Seq Expression	Chy3G063040
Synteny	Chy3G063040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTCACTCTCAGCAGCAGAGCCGTGACACCATTGATATCGTCCTTTGCACTACGGCGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTGAGCTTCGGAATCTCCAATCTCTTCGTCTCTAAAACGGGTTCCGCTCTGTCTCTGCCTTTCGTTCCTCTCTTGAGGTACTTATTTTTGCTTTCTTCCTTTCTTTTTTCATCAATTTATTCGACGATTGTTTCTTTCTGTGAATTTTGTTTAGTCGTTGGTTAATTTGTTTAGTTTAGTTGTTTAATCCGTGCACTTGTTGGTTTGCTAATGGAAAACGTATGTCAGATCGAAGCTTGCTGGTCAAGGACCAGCTAGGAACGTCCATTTGATAAAAATGGAAGGGAGTAGTGCTGCGGTGCCTAGCATTGTTGTTTATGTTACTGTTCCTAACAGGGAAGCAGGTTCTCTTTGATCTCAATGCTTTAGAAATCTCGCGTGATTTGTGGTTCTGAATTCATTGATCATTCTTTGGTATTTTGTGTTATGGAGTATGGACCAACTGTAATTAGAATAGGATAGTTTTCGTAGCTGTTAGTCAATCAAGTGACCAACAAATCAGGCTCTTCTAGCGTATATAAGCTTTAGTTGATGATAACACAGTGGTATGTTAATCCAATAGCATGGGGAATTGGGAATTGACGATATAGTTAATACTTATTTTACTTGCTATGCTAGTCACATCTTCAGTGTAAGGAGAGTTTTTGGGGGCAAATTTTGCGGAAGAAATAAAAAAAAATCTTATGTTGGCTACTGATGATGTTGACTATTGAGTAGTGATATTGTTGATTATGAGTTGGATATACATACTTGGCGCATTGGGCAAATAATTATCAGACTCGATAAGCAAATGATGGATTATATTATAACTCAAGAAATGCTCTGATGTTATCATATTATATATACTATTGTTGAAAATGTAGGTCATGTGTTTCTATCAAAAAGGAGAAAAAGAACAAAATATGTGAAGCATATTTTGGCTTCTTCTGCGTTAAAGAATGCTTAGCATGCTCACTTGGATGATTAATGTTCTGAGATAGTAAGGGTCTCTTGGTATTCAATATGGATTATGTTTTATGTTTTCTAATTTACTAAGTTAAATAGATTCAATGAAGATTTGTTTGACATACATGTATATATGTTTAATTTGTTTTTGGATTTTGTGATCCAAATAGCGTAAATTCTAAAATCAACATCTTTATGCTTGTGTAATTCAGATTTTAAATTTGAAGTTTTAAAATGCAATTGATATTGAAAAAGAGAATAAAGGTTTAGATAAATATAGATTTTATGTTCTAAACTCATATAATTTTTTTTAAAAAAGTTAAATGGTGTATAACATAATATATTTTAATTTTATCTTATTGTAAAATAAAAGTTATCCAAAATTGTTAACATAAAACATATTCATAATTTAATTATTAATAATCTTGTTTTGAGCTAATGTTTAGTTAACTACCTGCAACTGTTTTTAGAATTATAAATATATTATCATACTAAGTCTGTACTAATTTTATAAATGAGATTGAATTGCTAAACTAAATACATATTAAAAAATATTGAGAGCATTTACAAACCTGTTTTTGATTGATTTTTTGTTTTTAGACTATGCACCATACACGCACTAGGAATTTGGAAAAGTCACCAGAGTACAAAGTTAATTTTAAATGCGTTTTCTACCCCTTCAAACAAAACAAAACAAAAAATGATGAATTTGTATGCATTTTTGGGGTGCATAAGTCCGTTTTCATTATTTTTGTGTTTTGTTATTTCATTCATGGGTTCAATCCATTTGTGTTTTGTTATTTCAGCCATGGATTCAATCCTTGGTGGCCATGTACCTAGAAATTAGTTTCCTACGTGTTTTCTTGGTACCCAAATGTTGTAGGATTAGACGGGTTGTCATGTGAAATTAGTCGAGGTGTGCGTAAGCTGGCCGAACACTCACGGATATAAAAAAAAAATTCAACTTCTTTGTTCCCCTTTTATCTACGCTAACAGAACTAGTCCAATCAAATGCTTGGTATTCAAATTGCATTGAGTTACCTTGTTTTCTCTGTTGTGTCCATGTACATCTATATATATTTCATATAGTAAATGACATATCTAACTATGTACTTACTAGCAAGCATTGGATTGATTTTGCCCAAGTAAATTGTATTGTATTTCTTAGGACCGAGCGTCGGATTTTGTACTATGTGATTTACTTCTCTTTATTGGTCGTATGGTTTTTTATTTTACTCATTCACACTATTTCTGCAGGTAAGAAACTAGCTGAAAGTATTGTCAAAGAAAAACTTGCTGCTTGTGTTAACATAGTACCCGGTATGTGCATCTTCTCAACCTCTGCTCTTCATCTCAAGTGACAGGCATTGCTCATGGTTTAGATAAAATATTATGTCAACAAGATATATTATCCCTGCTTGCCGAAAATCTGGTATTCTCCTTTAAGTTTTCCATGTATATCAATAAAGTTGCTTCTAACTTTTTGATATTTAAAATTGAAGCTTAGTGGATCTTCCCTGTAATATTTCAGTGGCATTTTTTAGTGTAGGAATCTTGTAGAAATAGTTTACTTGATCATGTTGTGAAACGAAATTTCTTTTCTTTTGATCTGTTGACTCTTTAGATCTTGTGATTTCATAAAGAGAAGTGATGCTTCAAGGTGTTCCACAGCCCTTTTTAATCTTTAAATTTTTTTCAGTTGCCGTCCATTTAGTTCTTATTCTTTTAGAGATTGCTTTTCATTTTGTTGCAACTGCTAATGTGAATATGAATTGTTAGACTTCTACTGAATACTTTATAAATGCAGGTATAGAATCTGTATACCAGTGGAAGGGAGAGGTAAGGTTCCGATTTTCAAATATTCATGTATGGTTATCAAGTAGATGATTTTTGTTTGTCTTTACGAACAAAAGGAACTCAACTGTGGCTTTCTGTTTCTGGTTGACACAGATTCAGTCAGATCCTGAGGAACTTCTGATTATTAAGACTAGACAATCACTTCTGGGAGCACTGACGGATCATGTTAAGGCAAATCACCCATACGAGTAAGCTTAACATTCTTTCTTTGTTTTTGTTTGGTTTTCTTTTCATCCTTCATGTTTGTTGGGTTTTGGGCTCGTGTGTGTTTGTTTTTTAAAATTATTTTCAATATTGGGGAACAATGAAGCGGACGGGAAAATAGAATCGTGAATTGTGAACTGCTTTGCTTATCAGCTAGACACTTGGGGTTTTATGGATAATATTTTTTATTTCGTTAACCACAACCATTTGCCTTTCTTTTTCCTATTTAGTCGTACATTTCAGAGATTTTGTTTTTATTTTAAGTTTATACCAATCTTAGCTAAAACTTGAAACCAGGAACAGAATAGTTTGACTTTATTTTTTATCATTGAAATTAGACTAAAGTTATAGTATCATTAACGAGTGAGAAACCGAAAGAAGAGATGGGCATAAGTAGCAGAAAATCAAAGAAAAAAAAAAAAAGAACTAACAAGAAATTCTCATCTCAGTTATCGTTTTTTCAAAGGGGAGTTGGGAAGATGTTTTAAAAAGCCAAATTTCATCCCCTTCAAGGATTTACCTTCATTTTTGAAACAGGGTGCCTGAAGTTATTGCTTTGCCAATCAATGGTGGCAGCCTAGAGTACCTAGAATGGATCAAGAGCAGCACAAAGGACTGA

mRNA sequence

ATGGCTTTCACTCTCAGCAGCAGAGCCGTGACACCATTGATATCGTCCTTTGCACTACGGCGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTGAGCTTCGGAATCTCCAATCTCTTCGTCTCTAAAACGGGTTCCGCTCTGTCTCTGCCTTTCGTTCCTCTCTTGAGATCGAAGCTTGCTGGTCAAGGACCAGCTAGGAACGTCCATTTGATAAAAATGGAAGGGAGTAGTGCTGCGGTGCCTAGCATTGTTGTTTATGTTACTGTTCCTAACAGGGAAGCAGGTAAGAAACTAGCTGAAAGTATTGTCAAAGAAAAACTTGCTGCTTGTGTTAACATAGTACCCGGTATAGAATCTGTATACCAGTGGAAGGGAGAGATTCAGTCAGATCCTGAGGAACTTCTGATTATTAAGACTAGACAATCACTTCTGGGAGCACTGACGGATCATGTTAAGGCAAATCACCCATACGAGGTGCCTGAAGTTATTGCTTTGCCAATCAATGGTGGCAGCCTAGAGTACCTAGAATGGATCAAGAGCAGCACAAAGGACTGA

Coding sequence (CDS)

ATGGCTTTCACTCTCAGCAGCAGAGCCGTGACACCATTGATATCGTCCTTTGCACTACGGCGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTGAGCTTCGGAATCTCCAATCTCTTCGTCTCTAAAACGGGTTCCGCTCTGTCTCTGCCTTTCGTTCCTCTCTTGAGATCGAAGCTTGCTGGTCAAGGACCAGCTAGGAACGTCCATTTGATAAAAATGGAAGGGAGTAGTGCTGCGGTGCCTAGCATTGTTGTTTATGTTACTGTTCCTAACAGGGAAGCAGGTAAGAAACTAGCTGAAAGTATTGTCAAAGAAAAACTTGCTGCTTGTGTTAACATAGTACCCGGTATAGAATCTGTATACCAGTGGAAGGGAGAGATTCAGTCAGATCCTGAGGAACTTCTGATTATTAAGACTAGACAATCACTTCTGGGAGCACTGACGGATCATGTTAAGGCAAATCACCCATACGAGGTGCCTGAAGTTATTGCTTTGCCAATCAATGGTGGCAGCCTAGAGTACCTAGAATGGATCAAGAGCAGCACAAAGGACTGA

Protein sequence

MAFTLSSRAVTPLISSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKLAGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESVYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIKSSTKD*

Homology

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BLAST of Chy3G063040 vs. ExPASy Swiss-Prot
Match: P93009 (Protein CutA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CUTA PE=1 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.4e-55
Identity = 119/185 (64.32%), Postives = 142/185 (76.76%), Query Frame = 0


Query: 5   LSSRAVTPLISSFALRRRLPLVGAFCVLS-FGISNLFVS---KTGSALSLPFVPLLRSKL 64
           ++S   T L +    RR  P+VGAFCVLS   IS+L  S   K+G A S   VPLLRSK 
Sbjct: 1   MASSLTTRLSAVIGSRRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLLRSKF 60

Query: 65  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 124
           + +  + +   I+ME SS  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIVPGIES
Sbjct: 61  SSKAFSSS---IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVPGIES 120

Query: 125 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 184
           VY+W+G++QSD EELLIIKTRQSLL  LT+HV ANH Y+VPEVIALPI GGS +YLEW+K
Sbjct: 121 VYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYDVPEVIALPITGGSDKYLEWLK 180

Query: 185 SSTKD 186
           +ST++
Sbjct: 181 NSTRN 182

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BLAST of Chy3G063040 vs. ExPASy Swiss-Prot
Match: Q109R6 (Protein CutA 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CUTA1 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.3e-46
Identity = 99/172 (57.56%), Postives = 121/172 (70.35%), Query Frame = 0


Query: 14  ISSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKLAGQGPARNVHLIK 73
           +S   LRRR P+ GA   LS G      S + SA +                       +
Sbjct: 28  LSPLLLRRRAPIAGALLFLSLGAFAGVRSLSSSASA-----------------------R 87

Query: 74  MEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESVYQWKGEIQSDPE 133
           ME +S  VPSIVVYVTVPN+EAGK+LA SI+ EKLAACVNIVPGIESVY W+G++Q+D E
Sbjct: 88  MESTSTTVPSIVVYVTVPNKEAGKRLAGSIISEKLAACVNIVPGIESVYWWEGKVQTDAE 147

Query: 134 ELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIKSSTKD 186
           ELLIIKTR+SLL ALT+HVKANH Y+VPEVIALPI GG+L+YLEW+K+ST++
Sbjct: 148 ELLIIKTRESLLDALTEHVKANHEYDVPEVIALPIKGGNLKYLEWLKNSTRE 176

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BLAST of Chy3G063040 vs. ExPASy Swiss-Prot
Match: O60888 (Protein CutA OS=Homo sapiens OX=9606 GN=CUTA PE=1 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 6.7e-27
Identity = 63/161 (39.13%), Postives = 98/161 (60.87%), Query Frame = 0


Query: 31  VLSFGISNLFVSKTGSALSLP------FVPLLRSKLAGQGPARNVHLIKMEGSSAAVPSI 90
           VL  G+++L +S       LP       +P +   +A   P          GS     S+
Sbjct: 9   VLLGGVASLLLSFVWMPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSV 68

Query: 91  -VVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESVYQWKGEIQSDPEELLIIKTRQS 150
              +VT PN +  K++A ++V+++LAACVN++P I S+Y+WKG+I+ D E L++IKT+ S
Sbjct: 69  SAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSS 128

Query: 151 LLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIKSSTK 185
           L+ ALTD V++ HPYEV EVIALP+  G+  YL+W++  T+
Sbjct: 129 LVPALTDFVRSVHPYEVAEVIALPVEQGNFPYLQWVRQVTE 169

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BLAST of Chy3G063040 vs. ExPASy Swiss-Prot
Match: Q7SIA8 (Divalent-cation tolerance protein CutA OS=Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) OX=300852 GN=cutA PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-25
Identity = 50/99 (50.51%), Postives = 74/99 (74.75%), Query Frame = 0


Query: 85  VVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESVYQWKGEIQSDPEELLIIKTRQSL 144
           VV +TVP+ E  + +A+++V+E+LAACVNIVPG+ S+Y+W+GE+  D E LL++KT    
Sbjct: 4   VVLITVPSEEVARTIAKALVEERLAACVNIVPGLTSIYRWQGEVVEDQELLLLVKTTTHA 63

Query: 145 LGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIKSST 184
              L + VKA HPY VPE++ALPI  G+ EYL+W++ +T
Sbjct: 64  FPKLKERVKALHPYTVPEIVALPIAEGNREYLDWLRENT 102

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BLAST of Chy3G063040 vs. ExPASy Swiss-Prot
Match: P69678 (Protein CutA OS=Bos taurus OX=9913 GN=CUTA PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.1e-25
Identity = 60/131 (45.80%), Postives = 88/131 (67.18%), Query Frame = 0


Query: 56  LRSKLAGQGPARNVHLIKMEGSSAAVPSIV--VYVTVPNREAGKKLAESIVKEKLAACVN 115
           L S  +G  PA+          SA VP  V   +VT PN +  K++A ++V+++L ACVN
Sbjct: 41  LLSMASGSPPAQP----SSSSRSAYVPGSVSAAFVTCPNEKVAKEIARAVVEKRL-ACVN 100

Query: 116 IVPGIESVYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL 175
           +VP I S+Y+WKG+I+ D E L++IKT+ SL+ ALTD V++ HPYEV EVIALP+  G+ 
Sbjct: 101 LVPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPYEVAEVIALPVEQGNS 160

Query: 176 EYLEWIKSSTK 185
            YL+W++  T+
Sbjct: 161 PYLQWVRQVTE 166

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BLAST of Chy3G063040 vs. ExPASy TrEMBL
Match: A0A0A0LRU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370360 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.5e-95
Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MAFTLSSRAVTPLISSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60
           MAFTLSSRA TPLI+SFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL
Sbjct: 1   MAFTLSSRAATPLITSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of Chy3G063040 vs. ExPASy TrEMBL
Match: A0A1S3BBF3 (protein CutA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488107 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 3.9e-94
Identity = 180/185 (97.30%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MAFTLSSRAVTPLISSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60
           MAFTLSSRA TPLIS FALRRRLPLVGAFCVLSFGISNLFVSKTGSALS+PFVPLLRSKL
Sbjct: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           +YQWKGEIQ+DPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of Chy3G063040 vs. ExPASy TrEMBL
Match: A0A5A7VD29 (Protein CutA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004450 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 1.9e-93
Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MAFTLSSRAVTPLISSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60
           MAFTLSSRA TPLIS FALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL
Sbjct: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           +YQWKGEIQ+DPEELLIIKTRQSLLGALTDHVKA HPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKAIHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of Chy3G063040 vs. ExPASy TrEMBL
Match: A0A6J1K4I7 (protein CutA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492224 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.0e-86
Identity = 167/185 (90.27%), Postives = 172/185 (92.97%), Query Frame = 0


Query: 1   MAFTLSSRAVTPLISSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60
           MAFTL SR  TPL+S   LRRRLPLVGAFCVLSFG SNLFVS+TGSALSLPF PLLRS  
Sbjct: 1   MAFTLCSRVATPLLSPSVLRRRLPLVGAFCVLSFGFSNLFVSRTGSALSLPFAPLLRSTF 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
             QGPARNVHLIKMEG+SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           VYQWKGEIQ+D EELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS+EYLEWIK
Sbjct: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSVEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of Chy3G063040 vs. ExPASy TrEMBL
Match: A0A6J1BS17 (protein CutA, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005035 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.3e-85
Identity = 162/185 (87.57%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MAFTLSSRAVTPLISSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60
           MAFTL SR   PL+SS ALRRRLPLVGAFCVLSFGIS++F+S+TGSALSLPF PLLRSK 
Sbjct: 1   MAFTLCSRVSAPLLSSSALRRRLPLVGAFCVLSFGISHIFISRTGSALSLPFAPLLRSKF 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
            GQGPARNVH ++ME +SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  GGQGPARNVHFVRMEATSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           VYQWKGEIQ+DPEELLIIKTRQSLLG+LTDHVKANHPYEVPEVIAL I GGSLEYL+WIK
Sbjct: 121 VYQWKGEIQTDPEELLIIKTRQSLLGSLTDHVKANHPYEVPEVIALRITGGSLEYLDWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of Chy3G063040 vs. NCBI nr
Match: XP_004152609.1 (protein CutA, chloroplastic [Cucumis sativus] >KGN62736.1 hypothetical protein Csa_022362 [Cucumis sativus])

HSP 1 Score: 353 bits (906), Expect = 1.72e-122
Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MAFTLSSRAVTPLISSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60
           MAFTLSSRA TPLI+SFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL
Sbjct: 1   MAFTLSSRAATPLITSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 185
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of Chy3G063040 vs. NCBI nr
Match: XP_008444893.1 (PREDICTED: protein CutA, chloroplastic [Cucumis melo])

HSP 1 Score: 350 bits (897), Expect = 4.05e-121
Identity = 180/185 (97.30%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MAFTLSSRAVTPLISSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60
           MAFTLSSRA TPLIS FALRRRLPLVGAFCVLSFGISNLFVSKTGSALS+PFVPLLRSKL
Sbjct: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           +YQWKGEIQ+DPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 185
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of Chy3G063040 vs. NCBI nr
Match: KAA0065110.1 (protein CutA [Cucumis melo var. makuwa])

HSP 1 Score: 347 bits (891), Expect = 3.33e-120
Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MAFTLSSRAVTPLISSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60
           MAFTLSSRA TPLIS FALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL
Sbjct: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           +YQWKGEIQ+DPEELLIIKTRQSLLGALTDHVKA HPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKAIHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 185
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of Chy3G063040 vs. NCBI nr
Match: XP_038886215.1 (protein CutA, chloroplastic [Benincasa hispida] >XP_038886216.1 protein CutA, chloroplastic [Benincasa hispida])

HSP 1 Score: 340 bits (873), Expect = 1.85e-117
Identity = 176/185 (95.14%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 1   MAFTLSSRAVTPLISSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60
           MA T  SRA +PLISSF LRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSK 
Sbjct: 1   MALTFCSRATSPLISSFVLRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKF 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           A QGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  ASQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           VYQWKGEIQ+DPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 VYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 185
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of Chy3G063040 vs. NCBI nr
Match: XP_023545579.1 (protein CutA, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327 bits (837), Expect = 5.68e-112
Identity = 168/185 (90.81%), Postives = 172/185 (92.97%), Query Frame = 0


Query: 1   MAFTLSSRAVTPLISSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60
           MAFTL SR  TPL+S   LRRRLPLVGAFCVLSFG SNLFVSKTGSALSLPF PLLRS  
Sbjct: 1   MAFTLCSRVATPLLSPSVLRRRLPLVGAFCVLSFGFSNLFVSKTGSALSLPFAPLLRSTF 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
             QGPARNVHLIKMEG+SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           VYQWKGEIQ+D EELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS+EYLEWIK
Sbjct: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSMEYLEWIK 180

Query: 181 SSTKD 185
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of Chy3G063040 vs. TAIR 10
Match: AT2G33740.2 (Nitrogen regulatory PII-like, alpha/beta )

HSP 1 Score: 216.1 bits (549), Expect = 2.4e-56
Identity = 119/185 (64.32%), Postives = 142/185 (76.76%), Query Frame = 0


Query: 5   LSSRAVTPLISSFALRRRLPLVGAFCVLS-FGISNLFVS---KTGSALSLPFVPLLRSKL 64
           ++S   T L +    RR  P+VGAFCVLS   IS+L  S   K+G A S   VPLLRSK 
Sbjct: 1   MASSLTTRLSAVIGSRRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLLRSKF 60

Query: 65  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 124
           + +  + +   I+ME SS  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIVPGIES
Sbjct: 61  SSKAFSSS---IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVPGIES 120

Query: 125 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 184
           VY+W+G++QSD EELLIIKTRQSLL  LT+HV ANH Y+VPEVIALPI GGS +YLEW+K
Sbjct: 121 VYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYDVPEVIALPITGGSDKYLEWLK 180

Query: 185 SSTKD 186
           +ST++
Sbjct: 181 NSTRN 182

[Close]

BLAST of Chy3G063040 vs. TAIR 10
Match: AT2G33740.1 (Nitrogen regulatory PII-like, alpha/beta )

HSP 1 Score: 175.6 bits (444), Expect = 3.6e-44
Identity = 101/159 (63.52%), Postives = 118/159 (74.21%), Query Frame = 0


Query: 5   LSSRAVTPLISSFALRRRLPLVGAFCVLS-FGISNLFVS---KTGSALSLPFVPLLRSKL 64
           ++S   T L +    RR  P+VGAFCVLS   IS+L  S   K+G A S   VPLLRSK 
Sbjct: 1   MASSLTTRLSAVIGSRRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLLRSKF 60

Query: 65  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 124
           + +  + +   I+ME SS  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIVPGIES
Sbjct: 61  SSKAFSSS---IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVPGIES 120

Query: 125 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYE 160
           VY+W+G++QSD EELLIIKTRQSLL  LT+HV ANH YE
Sbjct: 121 VYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYE 156

The following BLAST results are available for this feature:

BLAST of Chy3G063040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93009	3.4e-55	64.32	Protein CutA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CUTA PE=1 SV=1	[more]
Q109R6	1.3e-46	57.56	Protein CutA 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CUTA1 ...	[more]
O60888	6.7e-27	39.13	Protein CutA OS=Homo sapiens OX=9606 GN=CUTA PE=1 SV=2	[more]
Q7SIA8	1.3e-25	50.51	Divalent-cation tolerance protein CutA OS=Thermus thermophilus (strain ATCC 2763...	[more]
P69678	2.1e-25	45.80	Protein CutA OS=Bos taurus OX=9913 GN=CUTA PE=1 SV=1	[more]

BLAST of Chy3G063040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRU0	3.5e-95	98.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370360 PE=3 SV=1	[more]
A0A1S3BBF3	3.9e-94	97.30	protein CutA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488107 PE=3 SV=1	[more]
A0A5A7VD29	1.9e-93	97.30	Protein CutA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004450 P...	[more]
A0A6J1K4I7	1.0e-86	90.27	protein CutA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492224 PE=3 SV=...	[more]
A0A6J1BS17	4.3e-85	87.57	protein CutA, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005035 PE=3 ...	[more]

BLAST of Chy3G063040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152609.1	1.72e-122	98.92	protein CutA, chloroplastic [Cucumis sativus] >KGN62736.1 hypothetical protein C...	[more]
XP_008444893.1	4.05e-121	97.30	PREDICTED: protein CutA, chloroplastic [Cucumis melo]	[more]
KAA0065110.1	3.33e-120	97.30	protein CutA [Cucumis melo var. makuwa]	[more]
XP_038886215.1	1.85e-117	95.14	protein CutA, chloroplastic [Benincasa hispida] >XP_038886216.1 protein CutA, ch...	[more]
XP_023545579.1	5.68e-112	90.81	protein CutA, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy3G063040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33740.2	2.4e-56	64.32	Nitrogen regulatory PII-like, alpha/beta	[more]
AT2G33740.1	3.6e-44	63.52	Nitrogen regulatory PII-like, alpha/beta	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015867	Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal	GENE3D	3.30.70.120		coord: 63..184 e-value: 2.8E-49 score: 167.6
IPR004323	Divalent ion tolerance protein, CutA	PFAM	PF03091	CutA1	coord: 84..181 e-value: 4.1E-38 score: 129.2
IPR004323	Divalent ion tolerance protein, CutA	PANTHER	PTHR23419	DIVALENT CATION TOLERANCE CUTA-RELATED	coord: 13..183
None	No IPR available	PANTHER	PTHR23419:SF8	FI09726P	coord: 13..183
IPR011322	Nitrogen regulatory PII-like, alpha/beta	SUPERFAMILY	54913	GlnB-like	coord: 83..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G063040.1	Chy3G063040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010038	response to metal ion
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005507	copper ion binding