Chy3G062950 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G062950
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	double-stranded RNA-binding protein 1-like
Location	chrH03: 16139147 .. 16141708 (-)
RNA-Seq Expression	Chy3G062950
Synteny	Chy3G062950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAGCCAAGGACAACTTTCAAGGTATTCCATTTTCCCTTTTCACTTTCCAACCGCTACTTTTCAAACTCGTTTCTGAATTGCAGTATTGATGTTCTTTCAGTTGGATTTCTCTAGAAACTCGGCAGTTTTTTTAGATTATTTTTAGAGAATTTTGATAATTTTACACGGGGGTGATTGATCCTCGATAAGAGAGTATACTGGGCAACTGGGGGGAGGGGTGGGGGAGGTAACTGATTGTGTGAGATGGGATGAGAAGTGAAGATCTTAATACAATTGTACTACTGTTTTCTTTTTAAAGAATGTGTTCTAAGTTAATTGATTCCTTTGTTTGATGTTTTTGATATTGTCGTGCCAGTTTTTTTTATTTTTTATTTTTTAATTCAATTTATTGGCTTGTTTCTTTTCATCTGTACTGTAACCTAGTTGTGAATATAGATTTCAGGTGAATGATGGGTTATTGTTATCATTACTATTTTTATTTTGATCTCTGATAAGTTTGTTGTTAGTGCTTATTTTTTCTCGTTCTTTGATGCATATCAGGTGTTTCAAATTGCTATGTTTTCAAAAGCCGACTGCAGGAATATGCACAAAAAGTGGGACTTCCCACACCTGTATACGAGACTATCAAAGAAGGTCCTTCACATGAGCCAACTTTTCATTCTACGGTGATTGTTAATGATGTTAGATATGATTCTCTACCGGGATTTTCTAATCGCAAGGCAGCAGAGCAGTCGGCTGCTGAAGTAGCTCTTATGGAACTGTCTAAATCCAGTGATCTTAATCCACATGTCTCTCAACCCGTGGTAAGATTTCATATCCTTCACCCCACATAACTTTTTGTTGTTGCTACTACTGTTTTTTTTTTTCTGAACGATCCTATGCAAAGCCCTCTTAATATCTAAATTTCAGAGTCCATTGTTTGGACTCATGACTATTTGTTGGATGGTTGTTTTATATTAAGTTTAACTGTCATAAATTGAGGGACAGTTTGGTATTTGACTTTGCATTTATTAAAAGCATTTTAGTATGCAACATATTCAAAATAACAGCGACTATGTGTGATTCAACCTAGATTGCTTTTTAGAACTTGAAGACACATTTGTACCGTAGAAAAGATCATGTTCAAGTATTAAACTTTTATTTCTTCCAAGTTATGGAGAGGGCCTTGGTTGAACTTCTCTGGACAAGAACTCTCTGCATCTGCTCGTCTTACCTAGACTCAATATCCATATCAAGCTTCTTGTTTATTTGTCCCCATTTAATTCTTATTTAGGGTGCAACATGGTTAATCTTTTGATAGCGTTCTTTTGGCTAAAAATTAGCCAACCCCTGTAGTCTACCGATCTTTAACTTCTTTTTGTATCTACTTTTAATGCTTTGAATCCTTTATCTACTTTTGTATCTACTTTCAAGATCTATTGTGCAAATAGTTTAGTATATCTTCTCTGCTGGATTATATATATAATGAAAATTTGGCTGGTCTTTGGCTGTGTTCTCTTACTATCAGGTTACAGCAGAATTGTATCCTTTTCTTTGGAGTCTCATTTGGCTGAAGTACTCTCTTTGATATCGATGAAAATATCCCTATTAATTTAATATTGAATAAATAATAAAGCTTCAACTTTTTTTTTATACTTCCCATACTCCCCCTAAATAAGGAATTAAGCCTCAATAGTCTCTATTTCCTCTTTTGCTATTGGGCCTTTACTAAACAGATTTCAACAGTCTATAGCTGTAATAGTAGAATTTCTGCTTTTATTTTATTTTATTTCTTCTTTGTCAACTTTGCCTTTTTCCAGCACGAAACAGGACTGTGCAAAAATCTGCTTCAGGAGTATGCACAGAAGATGAACTTTGCAATCCCAATTTATCAATGCCAAAAAGATGATGGTCCAGGCAGAGGATCCCTTTTCTCATGTACAGTAGAAATTGGAGGGATCCGCTACATTGGTGCTGTAGCAAAAACAAAGAAAGAAGCAGAAATTAAAGCTGCAAGAACTGCTTTGTTAGCAATCCAATCTTGCCCGAATTCATTGTCTGCAAAATCTGTCAATCAAGTTCAGCTCACTGTGATCCCATCATGCAAGCGAAAAGAAGCAGCAGATTGCTCAGTTAAACCAAAGTCCACTGCATCGCCCAGAGCAAAGAAAGGTCGATTTAAGAGAGGAGTGTTAAGTAAGAGAGGCTTCAGAAATGGATTAGTCGATTTGGACTTTGACAACATTGATAGATCAACCTTGGAACCTTTTACAACTGGGGCTGTCCAGTTGCCAGGGTATGTGGGACCAGTTGATTTAGCGAAAGATACTTTGCTGAATTCCGAGTGTAGAACGACTGATCTAAGCTCAAGTAACAATGACGTTTTGGTCTCCAACGTCCAAAGCAACATGCCTCCGCTCCTAAATGGTGATTCCGGAAATAGTTGTTCGGGTACTTTCAAATCCAATCAAGTAAACTGTGCAACTTCTAATGTTCTGAGTTCTCCTCTGACTGACGTTCAACCAACTTGTAGTGAAGTAGCGAATGTGGCTGCTGGAGTAACAGAAGAGCTTCAGTGA

mRNA sequence

ATGCCAGCCAAGGACAACTTTCAAGGTGTTTCAAATTGCTATGTTTTCAAAAGCCGACTGCAGGAATATGCACAAAAAGTGGGACTTCCCACACCTGTATACGAGACTATCAAAGAAGGTCCTTCACATGAGCCAACTTTTCATTCTACGGTGATTGTTAATGATGTTAGATATGATTCTCTACCGGGATTTTCTAATCGCAAGGCAGCAGAGCAGTCGGCTGCTGAAGTAGCTCTTATGGAACTGTCTAAATCCAGTGATCTTAATCCACATGTCTCTCAACCCGTGCACGAAACAGGACTGTGCAAAAATCTGCTTCAGGAGTATGCACAGAAGATGAACTTTGCAATCCCAATTTATCAATGCCAAAAAGATGATGGTCCAGGCAGAGGATCCCTTTTCTCATGTACAGTAGAAATTGGAGGGATCCGCTACATTGGTGCTGTAGCAAAAACAAAGAAAGAAGCAGAAATTAAAGCTGCAAGAACTGCTTTGTTAGCAATCCAATCTTGCCCGAATTCATTGTCTGCAAAATCTGTCAATCAAGTTCAGCTCACTGTGATCCCATCATGCAAGCGAAAAGAAGCAGCAGATTGCTCAGTTAAACCAAAGTCCACTGCATCGCCCAGAGCAAAGAAAGGTCGATTTAAGAGAGGAGTGTTAAGTAAGAGAGGCTTCAGAAATGGATTAGTCGATTTGGACTTTGACAACATTGATAGATCAACCTTGGAACCTTTTACAACTGGGGCTGTCCAGTTGCCAGGGTATGTGGGACCAGTTGATTTAGCGAAAGATACTTTGCTGAATTCCGAGTGTAGAACGACTGATCTAAGCTCAAGTAACAATGACGTTTTGGTCTCCAACGTCCAAAGCAACATGCCTCCGCTCCTAAATGGTGATTCCGGAAATAGTTGTTCGGGTACTTTCAAATCCAATCAAGTAAACTGTGCAACTTCTAATGTTCTGAGTTCTCCTCTGACTGACGTTCAACCAACTTGTAGTGAAGTAGCGAATGTGGCTGCTGGAGTAACAGAAGAGCTTCAGTGA

Coding sequence (CDS)

ATGCCAGCCAAGGACAACTTTCAAGGTGTTTCAAATTGCTATGTTTTCAAAAGCCGACTGCAGGAATATGCACAAAAAGTGGGACTTCCCACACCTGTATACGAGACTATCAAAGAAGGTCCTTCACATGAGCCAACTTTTCATTCTACGGTGATTGTTAATGATGTTAGATATGATTCTCTACCGGGATTTTCTAATCGCAAGGCAGCAGAGCAGTCGGCTGCTGAAGTAGCTCTTATGGAACTGTCTAAATCCAGTGATCTTAATCCACATGTCTCTCAACCCGTGCACGAAACAGGACTGTGCAAAAATCTGCTTCAGGAGTATGCACAGAAGATGAACTTTGCAATCCCAATTTATCAATGCCAAAAAGATGATGGTCCAGGCAGAGGATCCCTTTTCTCATGTACAGTAGAAATTGGAGGGATCCGCTACATTGGTGCTGTAGCAAAAACAAAGAAAGAAGCAGAAATTAAAGCTGCAAGAACTGCTTTGTTAGCAATCCAATCTTGCCCGAATTCATTGTCTGCAAAATCTGTCAATCAAGTTCAGCTCACTGTGATCCCATCATGCAAGCGAAAAGAAGCAGCAGATTGCTCAGTTAAACCAAAGTCCACTGCATCGCCCAGAGCAAAGAAAGGTCGATTTAAGAGAGGAGTGTTAAGTAAGAGAGGCTTCAGAAATGGATTAGTCGATTTGGACTTTGACAACATTGATAGATCAACCTTGGAACCTTTTACAACTGGGGCTGTCCAGTTGCCAGGGTATGTGGGACCAGTTGATTTAGCGAAAGATACTTTGCTGAATTCCGAGTGTAGAACGACTGATCTAAGCTCAAGTAACAATGACGTTTTGGTCTCCAACGTCCAAAGCAACATGCCTCCGCTCCTAAATGGTGATTCCGGAAATAGTTGTTCGGGTACTTTCAAATCCAATCAAGTAAACTGTGCAACTTCTAATGTTCTGAGTTCTCCTCTGACTGACGTTCAACCAACTTGTAGTGAAGTAGCGAATGTGGCTGCTGGAGTAACAGAAGAGCTTCAGTGA

Protein sequence

MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSVNQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRGVLSKRGFRNGLVDLDFDNIDRSTLEPFTTGAVQLPGYVGPVDLAKDTLLNSECRTTDLSSSNNDVLVSNVQSNMPPLLNGDSGNSCSGTFKSNQVNCATSNVLSSPLTDVQPTCSEVANVAAGVTEELQ*

Homology

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BLAST of Chy3G062950 vs. ExPASy Swiss-Prot
Match: O04492 (Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE=1 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 8.6e-68
Identity = 139/218 (63.76%), Postives = 167/218 (76.61%), Query Frame = 0


Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           M + D   GVSNCYVFKSRLQEYAQK  LPTPVYE +KEGPSH+  F STVI++ VRY+S
Sbjct: 1   MTSTDVSSGVSNCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIY 120
           LPGF NRKAAEQSAAEVAL EL+KSS+L+  VSQPVHETGLCKNLLQEYAQKMN+AIP+Y
Sbjct: 61  LPGFFNRKAAEQSAAEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSV 180
           QCQK +  GR + F+CTVEIGGI+Y GA  +TKK+AEI A RTALLAIQS   +  A   
Sbjct: 121 QCQKVETLGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDTKNNLAN-- 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKR 219
              QLTV+P C++K         ++  + +A+K +FK+
Sbjct: 181 YNTQLTVLP-CEKKTIQAAIPLKETVKTLKARKAQFKK 215

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BLAST of Chy3G062950 vs. ExPASy Swiss-Prot
Match: Q0DJA3 (Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB3 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 8.1e-58
Identity = 129/211 (61.14%), Postives = 149/211 (70.62%), Query Frame = 0


Query: 10  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKA 69
           V NCYVFKSRLQEYAQK GL TP Y T KEGPSHEP F STV++N+  Y SLPGFSNRKA
Sbjct: 30  VENCYVFKSRLQEYAQKAGLQTPEYHTSKEGPSHEPVFKSTVVINNTSYGSLPGFSNRKA 89

Query: 70  AEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIYQCQKDDGPG 129
           AEQSAAEVALME+ KS   N ++   V ETGLCKNLLQEYAQKMN+AIP Y C K   P 
Sbjct: 90  AEQSAAEVALMEIVKSIPANANI-PAVQETGLCKNLLQEYAQKMNYAIPSYICTK---PA 149

Query: 130 RG-SLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSVNQVQLTVI 189
            G + F CTVEIGGI+YIGA A+TKK+AEIKAARTALLAIQ         +    +  V+
Sbjct: 150 SGLAPFLCTVEIGGIQYIGAAARTKKDAEIKAARTALLAIQ---GQSEGSANGATKYIVV 209

Query: 190 PSCKRKEAADCSVKPKSTASP-RAKKGRFKR 219
           P   ++   +   +P  T  P +AKKG FK+
Sbjct: 210 PG--KRVGKEVEKRPIETPKPLKAKKGGFKK 231

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BLAST of Chy3G062950 vs. ExPASy Swiss-Prot
Match: Q0IQN6 (Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB8 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 5.2e-57
Identity = 126/210 (60.00%), Postives = 146/210 (69.52%), Query Frame = 0


Query: 10  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKA 69
           V NCYVFKSRLQEYAQK GL TP Y T KEGPSHEP F STV++N+  YDSLPGF NRKA
Sbjct: 28  VENCYVFKSRLQEYAQKTGLQTPEYHTFKEGPSHEPVFKSTVVINNTSYDSLPGFFNRKA 87

Query: 70  AEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIYQCQKDDGPG 129
           AEQSAAEVALME+ KS   N ++   V ETGLCKNLLQEYAQKMN+AIP Y C K     
Sbjct: 88  AEQSAAEVALMEIVKSIPANANI-PAVQETGLCKNLLQEYAQKMNYAIPSYICTK--SAS 147

Query: 130 RGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSVNQVQLTVIP 189
             + F CTVEIGGI+YIGA A+TKK+AEIKAARTALLAIQ         +    +  V+P
Sbjct: 148 GLAPFICTVEIGGIQYIGAAARTKKDAEIKAARTALLAIQ---GQSEGSANGATKYIVVP 207

Query: 190 SCKRKEAADCSVKPKSTASP-RAKKGRFKR 219
              ++   +   +P  T  P + KKG FK+
Sbjct: 208 G--KRVGKEVEKRPIETPKPLKVKKGGFKK 229

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BLAST of Chy3G062950 vs. ExPASy Swiss-Prot
Match: Q0IV63 (Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB7 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.5e-56
Identity = 126/210 (60.00%), Postives = 145/210 (69.05%), Query Frame = 0


Query: 10  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKA 69
           V NCYVFKSRLQEYAQK GL TP Y T KEGPSHEP F STV++N+  YDSLPGF NRKA
Sbjct: 28  VENCYVFKSRLQEYAQKAGLQTPEYHTFKEGPSHEPVFKSTVVINNTSYDSLPGFFNRKA 87

Query: 70  AEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIYQCQKDDGPG 129
           AEQSAAEVALME+ KS   N ++   V ETGLCKNLLQEYAQKMN+AIP Y C K     
Sbjct: 88  AEQSAAEVALMEIVKSIPANANI-PAVQETGLCKNLLQEYAQKMNYAIPSYICTK--SAS 147

Query: 130 RGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSVNQVQLTVIP 189
             + F CTVEIGGI+YIGA A+TKK+AEIKAARTALLAIQ         +    +  V+P
Sbjct: 148 GLAPFICTVEIGGIQYIGAAARTKKDAEIKAARTALLAIQ---GQSEGSANGATKYIVVP 207

Query: 190 SCKRKEAADCSVKPKSTASP-RAKKGRFKR 219
              ++   +    P  T  P + KKG FK+
Sbjct: 208 G--KRVGKEVEKMPIETPKPLKIKKGGFKK 229

[Close]

BLAST of Chy3G062950 vs. ExPASy Swiss-Prot
Match: Q0DKP4 (Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB2 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.4e-24
Identity = 63/158 (39.87%), Postives = 92/158 (58.23%), Query Frame = 0


Query: 15  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKAAEQSA 74
           ++K++LQE AQ+     P Y  I+EGP H P F +TV  N   ++S    S  + AE +A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAA 60

Query: 75  AEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIYQCQKDDGPGRGSLF 134
           AEVAL ELSK    +   ++ + ETG+ KNLLQE A +    +P+Y   +  GPG   +F
Sbjct: 61  AEVALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIR-SGPGHTPVF 120

Query: 135 SCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP 173
           +CTVE+ G+ + G   KTKK+A+  AA  A   ++  P
Sbjct: 121 TCTVELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLP 157

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BLAST of Chy3G062950 vs. ExPASy TrEMBL
Match: A0A0A0LRU8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370450 PE=4 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 3.2e-182
Identity = 331/351 (94.30%), Postives = 337/351 (96.01%), Query Frame = 0


Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS
Sbjct: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIY 120
           LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIP+Y
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSV 180
           QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLS KSV
Sbjct: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKG---RFKRGVLSKRGFRNGLVDLDFDN 240
           NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKG   RFKRGVL  R F NGLV+LDFDN
Sbjct: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN 240

Query: 241 IDRSTLEPFTTGAVQLPGYVGPVDLAKDTLLNSECRTTDLSSSNNDVLVSNVQSNMPPLL 300
            DRSTLEPFTTG VQLPGYVGPVDLAKDTLLNSECRTTDLSS+NNDVLVSNVQS+MP LL
Sbjct: 241 TDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLL 300

Query: 301 NGDSGNSCSGTFKSNQVNCATSNVLSSPLTDVQPTCSEVANVAAGVTEELQ 349
           NG+SGN CSGTF SNQVNCATSNV+SSPLTDVQPTCSEVANVAAGVT ELQ
Sbjct: 301 NGNSGNGCSGTFNSNQVNCATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ 351

[Close]

BLAST of Chy3G062950 vs. ExPASy TrEMBL
Match: A0A5A7VI00 (Double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004330 PE=4 SV=1)

HSP 1 Score: 636.3 bits (1640), Expect = 7.3e-179
Identity = 323/348 (92.82%), Postives = 332/348 (95.40%), Query Frame = 0


Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS
Sbjct: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIY 120
           LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIP+Y
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSV 180
           QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSV
Sbjct: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSV 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRGVLSKRGFRNGLVDLDFDNIDR 240
           NQVQLTVIPSCKRKEAADCSV PKSTA+PRAKKGRFKRGVL KRGFRNGLV+LDF+NIDR
Sbjct: 181 NQVQLTVIPSCKRKEAADCSVTPKSTAAPRAKKGRFKRGVLRKRGFRNGLVNLDFNNIDR 240

Query: 241 STLEPFTTGAVQLPGYVGPVDLAKDTLLNSECRTTDLSSSNNDVLVSNVQSNMPPLLNGD 300
           S LEPFTT AVQLPGY GPVDLAKDTL NSE RTTDLSSSNND LVSNVQS+MPP +N +
Sbjct: 241 SALEPFTTEAVQLPGYAGPVDLAKDTLPNSESRTTDLSSSNNDFLVSNVQSDMPPHVNSN 300

Query: 301 SGNSCSGTFKSNQVNCATSNVLSSPLTDVQPTCSEVANVAAGVTEELQ 349
            GN+CSGT  SNQVNCATSNV+S PLTDVQPTCSEV NVAAGVT ELQ
Sbjct: 301 FGNACSGTLNSNQVNCATSNVMSFPLTDVQPTCSEVGNVAAGVTGELQ 348

[Close]

BLAST of Chy3G062950 vs. ExPASy TrEMBL
Match: A0A1S3BBH0 (double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488118 PE=4 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 1.3e-175
Identity = 319/348 (91.67%), Postives = 330/348 (94.83%), Query Frame = 0


Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRY+S
Sbjct: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIY 120
           LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIP+Y
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSV 180
           QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKS+
Sbjct: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSI 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRGVLSKRGFRNGLVDLDFDNIDR 240
           N +QLTVIPSCKRKEAADCSV PKSTA+PRAKKGRFKRGV  KRGFRNGLV+LDF+NIDR
Sbjct: 181 N-LQLTVIPSCKRKEAADCSVTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDR 240

Query: 241 STLEPFTTGAVQLPGYVGPVDLAKDTLLNSECRTTDLSSSNNDVLVSNVQSNMPPLLNGD 300
           S LEPFTT AVQLPGY GPVDLAKDTL NSE RTTDLSSSNNDVLVSNVQS+MPP +N +
Sbjct: 241 SALEPFTTEAVQLPGYAGPVDLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSN 300

Query: 301 SGNSCSGTFKSNQVNCATSNVLSSPLTDVQPTCSEVANVAAGVTEELQ 349
            GN CSGT  SNQVNCATSNV+S PLTDVQPTCSEV NVAAGVT ELQ
Sbjct: 301 FGNGCSGTLNSNQVNCATSNVMSFPLTDVQPTCSEVGNVAAGVTGELQ 347

[Close]

BLAST of Chy3G062950 vs. ExPASy TrEMBL
Match: A0A1S3BBH3 (double-stranded RNA-binding protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488118 PE=4 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 8.1e-170
Identity = 310/341 (90.91%), Postives = 322/341 (94.43%), Query Frame = 0


Query: 8   QGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNR 67
           + VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRY+SLPGFSNR
Sbjct: 2   RSVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNR 61

Query: 68  KAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIYQCQKDDG 127
           KAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIP+YQCQKDDG
Sbjct: 62  KAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDG 121

Query: 128 PGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSVNQVQLTV 187
           PGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKS+N +QLTV
Sbjct: 122 PGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTV 181

Query: 188 IPSCKRKEAADCSVKPKSTASPRAKKGRFKRGVLSKRGFRNGLVDLDFDNIDRSTLEPFT 247
           IPSCKRKEAADCSV PKSTA+PRAKKGRFKRGV  KRGFRNGLV+LDF+NIDRS LEPFT
Sbjct: 182 IPSCKRKEAADCSVTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFT 241

Query: 248 TGAVQLPGYVGPVDLAKDTLLNSECRTTDLSSSNNDVLVSNVQSNMPPLLNGDSGNSCSG 307
           T AVQLPGY GPVDLAKDTL NSE RTTDLSSSNNDVLVSNVQS+MPP +N + GN CSG
Sbjct: 242 TEAVQLPGYAGPVDLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSG 301

Query: 308 TFKSNQVNCATSNVLSSPLTDVQPTCSEVANVAAGVTEELQ 349
           T  SNQVNCATSNV+S PLTDVQPTCSEV NVAAGVT ELQ
Sbjct: 302 TLNSNQVNCATSNVMSFPLTDVQPTCSEVGNVAAGVTGELQ 341

[Close]

BLAST of Chy3G062950 vs. ExPASy TrEMBL
Match: A0A6J1HEW7 (double-stranded RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111462846 PE=4 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 3.4e-144
Identity = 273/348 (78.45%), Postives = 296/348 (85.06%), Query Frame = 0


Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           MPAKD+FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTF+STVIV DVRYDS
Sbjct: 1   MPAKDSFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFYSTVIVKDVRYDS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIY 120
           LPGFSNRKAAEQSAAEVALMELSKS+DLNPHVS PVHETGLCKNLLQEYAQKMNFAIP+Y
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSNDLNPHVSLPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSV 180
           QC+KDD  GR  LFSCTVEIGGIRYIGA AKTKKEAEIKAARTALLAIQSCP SL   SV
Sbjct: 121 QCKKDDSSGRTPLFSCTVEIGGIRYIGAAAKTKKEAEIKAARTALLAIQSCPTSLPENSV 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRGVLSKRGFRNGLVDLDFDNIDR 240
           NQVQLTVIP CKRKEAADCSVKPK+  +PR KKGRFK+    K+G RNGL +L+F N DR
Sbjct: 181 NQVQLTVIP-CKRKEAADCSVKPKTAGAPRIKKGRFKKVASKKKGHRNGLPNLEF-NFDR 240

Query: 241 STLEPFTTGAVQ-LPGYVGPVDLAKDTLLNSECRTTDLSSSNNDVLVSNVQSNMPPLLNG 300
           S+ EP  T  V  +PG    V+LAKDT+LNSE +TTDLSSS NDVLVSN+QS+ P L NG
Sbjct: 241 SSFEPLETNGVDPVPGLGESVELAKDTVLNSEYKTTDLSSSGNDVLVSNIQSDTPQLPNG 300

Query: 301 DSGNSCSGTFKSNQVNCATSNVLSSPLTDVQPTCSEVANVAAGVTEEL 348
           + GN     F SNQ+NC+TS+V+S PL DVQ TC EVANVA GVT EL
Sbjct: 301 NFGNDRLDAFSSNQINCSTSDVMSFPLPDVQATCGEVANVATGVTGEL 346

[Close]

BLAST of Chy3G062950 vs. NCBI nr
Match: XP_011649689.1 (double-stranded RNA-binding protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 644 bits (1660), Expect = 6.25e-232
Identity = 331/351 (94.30%), Postives = 337/351 (96.01%), Query Frame = 0


Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS
Sbjct: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIY 120
           LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIP+Y
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSV 180
           QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLS KSV
Sbjct: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKR---GVLSKRGFRNGLVDLDFDN 240
           NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKR   GVL  R F NGLV+LDFDN
Sbjct: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN 240

Query: 241 IDRSTLEPFTTGAVQLPGYVGPVDLAKDTLLNSECRTTDLSSSNNDVLVSNVQSNMPPLL 300
            DRSTLEPFTTG VQLPGYVGPVDLAKDTLLNSECRTTDLSS+NNDVLVSNVQS+MP LL
Sbjct: 241 TDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLL 300

Query: 301 NGDSGNSCSGTFKSNQVNCATSNVLSSPLTDVQPTCSEVANVAAGVTEELQ 348
           NG+SGN CSGTF SNQVNCATSNV+SSPLTDVQPTCSEVANVAAGVT ELQ
Sbjct: 301 NGNSGNGCSGTFNSNQVNCATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ 351

[Close]

BLAST of Chy3G062950 vs. NCBI nr
Match: KAA0065099.1 (double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 632 bits (1631), Expect = 1.47e-227
Identity = 323/348 (92.82%), Postives = 332/348 (95.40%), Query Frame = 0


Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS
Sbjct: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIY 120
           LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIP+Y
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSV 180
           QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSV
Sbjct: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSV 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRGVLSKRGFRNGLVDLDFDNIDR 240
           NQVQLTVIPSCKRKEAADCSV PKSTA+PRAKKGRFKRGVL KRGFRNGLV+LDF+NIDR
Sbjct: 181 NQVQLTVIPSCKRKEAADCSVTPKSTAAPRAKKGRFKRGVLRKRGFRNGLVNLDFNNIDR 240

Query: 241 STLEPFTTGAVQLPGYVGPVDLAKDTLLNSECRTTDLSSSNNDVLVSNVQSNMPPLLNGD 300
           S LEPFTT AVQLPGY GPVDLAKDTL NSE RTTDLSSSNND LVSNVQS+MPP +N +
Sbjct: 241 SALEPFTTEAVQLPGYAGPVDLAKDTLPNSESRTTDLSSSNNDFLVSNVQSDMPPHVNSN 300

Query: 301 SGNSCSGTFKSNQVNCATSNVLSSPLTDVQPTCSEVANVAAGVTEELQ 348
            GN+CSGT  SNQVNCATSNV+S PLTDVQPTCSEV NVAAGVT ELQ
Sbjct: 301 FGNACSGTLNSNQVNCATSNVMSFPLTDVQPTCSEVGNVAAGVTGELQ 348

[Close]

BLAST of Chy3G062950 vs. NCBI nr
Match: XP_008444916.1 (PREDICTED: double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 622 bits (1603), Expect = 2.61e-223
Identity = 319/348 (91.67%), Postives = 330/348 (94.83%), Query Frame = 0


Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRY+S
Sbjct: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIY 120
           LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIP+Y
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSV 180
           QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKS+
Sbjct: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSI 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRGVLSKRGFRNGLVDLDFDNIDR 240
           N +QLTVIPSCKRKEAADCSV PKSTA+PRAKKGRFKRGV  KRGFRNGLV+LDF+NIDR
Sbjct: 181 N-LQLTVIPSCKRKEAADCSVTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDR 240

Query: 241 STLEPFTTGAVQLPGYVGPVDLAKDTLLNSECRTTDLSSSNNDVLVSNVQSNMPPLLNGD 300
           S LEPFTT AVQLPGY GPVDLAKDTL NSE RTTDLSSSNNDVLVSNVQS+MPP +N +
Sbjct: 241 SALEPFTTEAVQLPGYAGPVDLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSN 300

Query: 301 SGNSCSGTFKSNQVNCATSNVLSSPLTDVQPTCSEVANVAAGVTEELQ 348
            GN CSGT  SNQVNCATSNV+S PLTDVQPTCSEV NVAAGVT ELQ
Sbjct: 301 FGNGCSGTLNSNQVNCATSNVMSFPLTDVQPTCSEVGNVAAGVTGELQ 347

[Close]

BLAST of Chy3G062950 vs. NCBI nr
Match: XP_008444917.1 (PREDICTED: double-stranded RNA-binding protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 602 bits (1553), Expect = 8.67e-216
Identity = 310/341 (90.91%), Postives = 322/341 (94.43%), Query Frame = 0


Query: 8   QGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNR 67
           + VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRY+SLPGFSNR
Sbjct: 2   RSVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNR 61

Query: 68  KAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIYQCQKDDG 127
           KAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIP+YQCQKDDG
Sbjct: 62  KAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDG 121

Query: 128 PGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSVNQVQLTV 187
           PGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKS+N +QLTV
Sbjct: 122 PGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTV 181

Query: 188 IPSCKRKEAADCSVKPKSTASPRAKKGRFKRGVLSKRGFRNGLVDLDFDNIDRSTLEPFT 247
           IPSCKRKEAADCSV PKSTA+PRAKKGRFKRGV  KRGFRNGLV+LDF+NIDRS LEPFT
Sbjct: 182 IPSCKRKEAADCSVTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFT 241

Query: 248 TGAVQLPGYVGPVDLAKDTLLNSECRTTDLSSSNNDVLVSNVQSNMPPLLNGDSGNSCSG 307
           T AVQLPGY GPVDLAKDTL NSE RTTDLSSSNNDVLVSNVQS+MPP +N + GN CSG
Sbjct: 242 TEAVQLPGYAGPVDLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSG 301

Query: 308 TFKSNQVNCATSNVLSSPLTDVQPTCSEVANVAAGVTEELQ 348
           T  SNQVNCATSNV+S PLTDVQPTCSEV NVAAGVT ELQ
Sbjct: 302 TLNSNQVNCATSNVMSFPLTDVQPTCSEVGNVAAGVTGELQ 341

[Close]

BLAST of Chy3G062950 vs. NCBI nr
Match: XP_011649690.1 (double-stranded RNA-binding protein 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 558 bits (1437), Expect = 9.99e-199
Identity = 286/301 (95.02%), Postives = 290/301 (96.35%), Query Frame = 0


Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS
Sbjct: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIY 120
           LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIP+Y
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSV 180
           QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLS KSV
Sbjct: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKR---GVLSKRGFRNGLVDLDFDN 240
           NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKR   GVL  R F NGLV+LDFDN
Sbjct: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDN 240

Query: 241 IDRSTLEPFTTGAVQLPGYVGPVDLAKDTLLNSECRTTDLSSSNNDVLVSNVQSNMPPLL 298
            DRSTLEPFTTG VQLPGYVGPVDLAKDTLLNSECRTTDLSS+NNDVLVSNVQS+MP LL
Sbjct: 241 TDRSTLEPFTTGVVQLPGYVGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLL 300

[Close]

BLAST of Chy3G062950 vs. TAIR 10
Match: AT1G09700.1 (dsRNA-binding domain-like superfamily protein )

HSP 1 Score: 258.8 bits (660), Expect = 6.1e-69
Identity = 139/218 (63.76%), Postives = 167/218 (76.61%), Query Frame = 0


Query: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60
           M + D   GVSNCYVFKSRLQEYAQK  LPTPVYE +KEGPSH+  F STVI++ VRY+S
Sbjct: 1   MTSTDVSSGVSNCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNS 60

Query: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIY 120
           LPGF NRKAAEQSAAEVAL EL+KSS+L+  VSQPVHETGLCKNLLQEYAQKMN+AIP+Y
Sbjct: 61  LPGFFNRKAAEQSAAEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLY 120

Query: 121 QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSV 180
           QCQK +  GR + F+CTVEIGGI+Y GA  +TKK+AEI A RTALLAIQS   +  A   
Sbjct: 121 QCQKVETLGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDTKNNLAN-- 180

Query: 181 NQVQLTVIPSCKRKEAADCSVKPKSTASPRAKKGRFKR 219
              QLTV+P C++K         ++  + +A+K +FK+
Sbjct: 181 YNTQLTVLP-CEKKTIQAAIPLKETVKTLKARKAQFKK 215

[Close]

BLAST of Chy3G062950 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 110.2 bits (274), Expect = 3.5e-24
Identity = 63/158 (39.87%), Postives = 89/158 (56.33%), Query Frame = 0


Query: 15  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKAAEQSA 74
           ++K++LQE AQ+     P Y   +EGP H P F ++V  N   ++S    S  + AE SA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 75  AEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIYQCQKDDGPGRGSLF 134
           AEVAL  LS         ++ + ETG+ KNLLQE A +    +P+Y   +  GPG    F
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVR-SGPGHIPTF 120

Query: 135 SCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP 173
           SCTVE+ G+ + G  AKTKK+AE  AA  A  +++  P
Sbjct: 121 SCTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMP 157

[Close]

BLAST of Chy3G062950 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 )

HSP 1 Score: 110.2 bits (274), Expect = 3.5e-24
Identity = 63/158 (39.87%), Postives = 89/158 (56.33%), Query Frame = 0


Query: 15  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKAAEQSA 74
           ++K++LQE AQ+     P Y   +EGP H P F ++V  N   ++S    S  + AE SA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 75  AEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIYQCQKDDGPGRGSLF 134
           AEVAL  LS         ++ + ETG+ KNLLQE A +    +P+Y   +  GPG    F
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVR-SGPGHIPTF 120

Query: 135 SCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP 173
           SCTVE+ G+ + G  AKTKK+AE  AA  A  +++  P
Sbjct: 121 SCTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMP 157

[Close]

BLAST of Chy3G062950 vs. TAIR 10
Match: AT2G28380.1 (dsRNA-binding protein 2 )

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-21
Identity = 63/163 (38.65%), Postives = 91/163 (55.83%), Query Frame = 0


Query: 15  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKAAEQSA 74
           ++K++LQE AQ+     P Y  I+EGP H P F +TV  N   ++S    S  + AE SA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 75  AEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIYQCQKDDGPGRGSLF 134
           AEVAL  LS     +   ++ + ETG+ KNLLQE AQ++   +P Y   +  G G   +F
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFR-SGLGHQPVF 120

Query: 135 SCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSA 178
           + TVE+ GI + G  AK KK+AE  AA  A  +++      S+
Sbjct: 121 TGTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSS 162

[Close]

BLAST of Chy3G062950 vs. TAIR 10
Match: AT5G41070.1 (dsRNA-binding protein 5 )

HSP 1 Score: 96.3 bits (238), Expect = 5.2e-20
Identity = 64/176 (36.36%), Postives = 96/176 (54.55%), Query Frame = 0


Query: 15  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRKAAEQSA 74
           ++K++LQE AQ+     P Y  I+EGP H P F ++V  N   ++S    S  + AE +A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 75  AEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPIYQCQKDDG---PGRG 134
           AEV+L  LS         ++ + ETG+ KNLLQE A +    +P+Y   +      PG  
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPG-- 120

Query: 135 SLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSVNQVQLTV 188
             FSCTVE+ G+ + G  AKTKK+AE  AA  A  +++   +SL ++   + Q  V
Sbjct: 121 --FSCTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM-SSLDSQDEEKEQEAV 171

The following BLAST results are available for this feature:

BLAST of Chy3G062950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04492	8.6e-68	63.76	Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE...	[more]
Q0DJA3	8.1e-58	61.14	Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0IQN6	5.2e-57	60.00	Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0IV63	1.5e-56	60.00	Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0DKP4	3.4e-24	39.87	Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Chy3G062950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRU8	3.2e-182	94.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370450 PE=4 SV=1	[more]
A0A5A7VI00	7.3e-179	92.82	Double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BBH0	1.3e-175	91.67	double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S3BBH3	8.1e-170	90.91	double-stranded RNA-binding protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1HEW7	3.4e-144	78.45	double-stranded RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of Chy3G062950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649689.1	6.25e-232	94.30	double-stranded RNA-binding protein 1 isoform X1 [Cucumis sativus]	[more]
KAA0065099.1	1.47e-227	92.82	double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008444916.1	2.61e-223	91.67	PREDICTED: double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo]	[more]
XP_008444917.1	8.67e-216	90.91	PREDICTED: double-stranded RNA-binding protein 1 isoform X2 [Cucumis melo]	[more]
XP_011649690.1	9.99e-199	95.02	double-stranded RNA-binding protein 1 isoform X2 [Cucumis sativus]	[more]

BLAST of Chy3G062950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09700.1	6.1e-69	63.76	dsRNA-binding domain-like superfamily protein	[more]
AT3G26932.1	3.5e-24	39.87	dsRNA-binding protein 3	[more]
AT3G26932.2	3.5e-24	39.87	dsRNA-binding protein 3	[more]
AT2G28380.1	1.2e-21	38.65	dsRNA-binding protein 2	[more]
AT5G41070.1	5.2e-20	36.36	dsRNA-binding protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 102..169 e-value: 2.3E-18 score: 77.0 coord: 16..83 e-value: 1.8E-20 score: 84.0
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 103..166 e-value: 3.4E-15 score: 56.5 coord: 17..81 e-value: 8.8E-15 score: 55.2
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 15..84 score: 14.781431
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 101..170 score: 12.42663
None	No IPR available	GENE3D	3.30.160.20		coord: 98..170 e-value: 1.3E-23 score: 85.1
None	No IPR available	GENE3D	3.30.160.20		coord: 16..97 e-value: 7.2E-26 score: 92.1
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 16..86
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 103..175
IPR031147	Double-stranded RNA-binding protein	PANTHER	PTHR11207:SF1	DOUBLE-STRANDED RNA-BINDING PROTEIN 1	coord: 1..224
IPR011907	Ribonuclease III	PANTHER	PTHR11207	RIBONUCLEASE III	coord: 1..224
IPR044451	AtDRB-like, second double-stranded RNA binding domain, plant	CDD	cd19908	DSRM_AtDRB-like_rpt2	coord: 100..169 e-value: 7.76011E-31 score: 109.876
IPR044450	AtDRB-like, first double-stranded RNA binding domain, plant	CDD	cd19907	DSRM_AtDRB-like_rpt1	coord: 15..83 e-value: 3.5116E-32 score: 113.34

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G062950.1	Chy3G062950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010589	leaf proximal/distal pattern formation
biological_process	GO:0010305	leaf vascular tissue pattern formation
biological_process	GO:0035279	mRNA destabilization-mediated gene silencing by miRNA
biological_process	GO:0031054	pre-miRNA processing
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009733	response to auxin
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0016075	rRNA catabolic process
cellular_component	GO:0010445	nuclear dicing body
molecular_function	GO:0003725	double-stranded RNA binding
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0035198	miRNA binding
molecular_function	GO:0004525	ribonuclease III activity
molecular_function	GO:0003723	RNA binding