Chy3G062550 (gene) Cucumber (hystrix) v1

Overview
NameChy3G062550
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionEpidermal patterning factor-like protein
LocationchrH03: 15765464 .. 15766023 (+)
RNA-Seq ExpressionChy3G062550
SyntenyChy3G062550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAGCTTTCAAATTTGGCACAGAAACAGAAACAAACATGTTTCAATTCTCTTGCTGTTCCTCTCTGTTTTCATTCTCATTCTTGTCACATCCATTGAAGGTAAGTCATTGTAAAAGTTGAGCTTTTTTTTTTTTTTTTTTTTTTTTATTTTATATAGAGAGAGATTGTTGAGCTTTTGAGTTGTAAGGATATTGTAGGTAGGGGAATTCAAGCAATGGAGGGAGAAAGGAAGTCGGCAGAGGCGGTGGAGGTAGCGACGGAGGAGGAGGAGAAGATGGGGATGATGATGAGGAATCAAATAGGGTCAAGACCACCAAGCTGTAGAAGGAGGTGTAGGGAATGTGGAGGACATTGTGAAGCAGTACAAGTACCAGTGGCATTACATGATTCAAATCAGAATCAAAGAAAAGGAAGAAGAAAAAGAAGAAGAAGAAGTAGTAGATATTTCTCTGTTAATTCAAAACATGATGTTGCTTTATCTAGTGAAGATGAGACCTCTAATTATAAGCCTATAAGCTGGAAATGCAAATGTGGGAACTTCATCTTCAACCCATGA

mRNA sequence

ATGGGCAGCTTTCAAATTTGGCACAGAAACAGAAACAAACATGTTTCAATTCTCTTGCTGTTCCTCTCTGTTTTCATTCTCATTCTTGTCACATCCATTGAAGGTAGGGGAATTCAAGCAATGGAGGGAGAAAGGAAGTCGGCAGAGGCGGTGGAGGTAGCGACGGAGGAGGAGGAGAAGATGGGGATGATGATGAGGAATCAAATAGGGTCAAGACCACCAAGCTGTAGAAGGAGGTGTAGGGAATGTGGAGGACATTGTGAAGCAGTACAAGTACCAGTGGCATTACATGATTCAAATCAGAATCAAAGAAAAGGAAGAAGAAAAAGAAGAAGAAGAAGTAGTAGATATTTCTCTGTTAATTCAAAACATGATGTTGCTTTATCTAGTGAAGATGAGACCTCTAATTATAAGCCTATAAGCTGGAAATGCAAATGTGGGAACTTCATCTTCAACCCATGA

Coding sequence (CDS)

ATGGGCAGCTTTCAAATTTGGCACAGAAACAGAAACAAACATGTTTCAATTCTCTTGCTGTTCCTCTCTGTTTTCATTCTCATTCTTGTCACATCCATTGAAGGTAGGGGAATTCAAGCAATGGAGGGAGAAAGGAAGTCGGCAGAGGCGGTGGAGGTAGCGACGGAGGAGGAGGAGAAGATGGGGATGATGATGAGGAATCAAATAGGGTCAAGACCACCAAGCTGTAGAAGGAGGTGTAGGGAATGTGGAGGACATTGTGAAGCAGTACAAGTACCAGTGGCATTACATGATTCAAATCAGAATCAAAGAAAAGGAAGAAGAAAAAGAAGAAGAAGAAGTAGTAGATATTTCTCTGTTAATTCAAAACATGATGTTGCTTTATCTAGTGAAGATGAGACCTCTAATTATAAGCCTATAAGCTGGAAATGCAAATGTGGGAACTTCATCTTCAACCCATGA

Protein sequence

MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAEAVEVATEEEEKMGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRRRSSRYFSVNSKHDVALSSEDETSNYKPISWKCKCGNFIFNP*
Homology
[Close]
BLAST of Chy3G062550 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.3e-15
Identity = 54/133 (40.60%), Postives = 72/133 (54.14%), Query Frame = 0 

Query: 22  LSVFILILVTSIEGRGIQAMEGERKSAEAVEVATEEEEKMGMMMRNQIGSRPPSCRR-RC 81
           +S F+LIL+  +       M   R   ++VE     ++ + MMMR  IGSRPP C R RC
Sbjct: 7   MSSFLLILLI-LNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCERVRC 66

Query: 82  RECGGHCEAVQVPVALHDSNQNQRKGRRKRRRRSSRYFSVNSKHDVALSSEDETSNYKPI 141
           R C GHCEA+QVP         Q K        SS   S +    +  +  D+++NYKP+
Sbjct: 67  RSC-GHCEAIQVP------TNPQTKLHSPLTTSSS---SSSETIHLDYTRGDDSTNYKPM 126

Query: 142 SWKCKCGNFIFNP 154
           SWKCKCGN I+NP
Sbjct: 127 SWKCKCGNSIYNP 128

[Close]
BLAST of Chy3G062550 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 7.8e-05
Identity = 39/136 (28.68%), Postives = 63/136 (46.32%), Query Frame = 0 

Query: 19  LLFLSVFILILVTSIEGRGIQAMEGERKSAEAVEVATEEEEKMGMMMRNQIGSRPPSCRR 78
           LL L + +++L+T      +Q ++       + +VA  E+       + ++GS PPSC  
Sbjct: 9   LLLLPLILILLITPQVSSFLQPIQ----PPISPQVALIED-------KARLGSTPPSCHN 68

Query: 79  RCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRRRSSRYFSVNSKHDVALSSE-DETSNY 138
           RC  C   C A+QVP              R R  R + +     +   +L++  D+ SNY
Sbjct: 69  RCNNC-HPCMAIQVPTL----------PTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNY 122

Query: 139 KPISWKCKCGNFIFNP 154
           KP+ WKC C    +NP
Sbjct: 129 KPMGWKCHCNGHFYNP 122

[Close]
BLAST of Chy3G062550 vs. ExPASy TrEMBL
Match: A0A0A0LPQ0 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G372820 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.3e-74
Identity = 146/153 (95.42%), Postives = 148/153 (96.73%), Query Frame = 0 

Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAEAVEVATEEEEK 60
           MGSFQIWHRNRNKH+SILLLFLSVFILILVTSIEGRGIQAMEGERKSA   EVATEEEEK
Sbjct: 1   MGSFQIWHRNRNKHISILLLFLSVFILILVTSIEGRGIQAMEGERKSA---EVATEEEEK 60

Query: 61  MGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRRRSSRYFSV 120
           MGMMMRNQIGSRPPSCRR+CRECGGHCEAVQVPVALHDSNQNQRKGRRK RR SSRYFSV
Sbjct: 61  MGMMMRNQIGSRPPSCRRKCRECGGHCEAVQVPVALHDSNQNQRKGRRK-RRSSSRYFSV 120

Query: 121 NSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154
           NSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 NSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 149

[Close]
BLAST of Chy3G062550 vs. ExPASy TrEMBL
Match: A0A1S3BBM2 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103488159 PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.4e-72
Identity = 143/154 (92.86%), Postives = 146/154 (94.81%), Query Frame = 0 

Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAEAVEVAT-EEEE 60
           MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAE V VAT EEEE
Sbjct: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEE 60

Query: 61  KMGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRRRSSRYFS 120
           KMGMMMRNQIGSRPPSCRR+C ECGGHCEAVQVPVALHDSNQNQ+KGRR RRR S RYFS
Sbjct: 61  KMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRR-RRRSSRRYFS 120

Query: 121 VNSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154
            +SKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 DHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 153

[Close]
BLAST of Chy3G062550 vs. ExPASy TrEMBL
Match: A0A5A7VH43 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003900 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.5e-72
Identity = 143/155 (92.26%), Postives = 146/155 (94.19%), Query Frame = 0 

Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAEAVEVAT--EEE 60
           MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAE V VAT  EEE
Sbjct: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEE 60

Query: 61  EKMGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRRRSSRYF 120
           EKMGMMMRNQIGSRPPSCRR+C ECGGHCEAVQVPVALHDSNQNQ+KGRR RRR S RYF
Sbjct: 61  EKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRR-RRRSSRRYF 120

Query: 121 SVNSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154
           S +SKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 SDHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154

[Close]
BLAST of Chy3G062550 vs. ExPASy TrEMBL
Match: A0A6J1BQW9 (Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC111004910 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 8.3e-42
Identity = 99/154 (64.29%), Postives = 113/154 (73.38%), Query Frame = 0 

Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSI-EGRGIQAMEGERKSAEAVEVATEEEE 60
           MGS Q WHRN+ +H+SI LL LSV I + V S+ EGRGI     E +  EA     E  E
Sbjct: 1   MGSLQNWHRNK-QHISISLLLLSVSIFVDVISMAEGRGIPTPLMEGRKVEAAGSWPELPE 60

Query: 61  KMGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRRRSSRYFS 120
           K+G M+R+QIGSRPPSCRRRCRECGGHCEA+QVPVALHDS QNQRK R      ++   +
Sbjct: 61  KVG-MIRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQNQRKKRSSHFPAAAATSA 120

Query: 121 VNSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154
             S  D+ALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 GASNKDMALSSEDETSNYKPISWKCKCGNFIFNP 152

[Close]
BLAST of Chy3G062550 vs. ExPASy TrEMBL
Match: A0A6J1KP85 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496352 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.8e-39
Identity = 101/159 (63.52%), Postives = 118/159 (74.21%), Query Frame = 0 

Query: 1   MGSFQIWHRNRNKHVSI-LLLFLSVFILILVTSI-EGRGIQA-MEGERKSAEAVEVATEE 60
           MGS QIWH  RNKH+SI  L FLSVF+ I +TSI EGRG Q  +  +RK  E    A   
Sbjct: 1   MGSLQIWH--RNKHLSIPFLFFLSVFLFIHLTSIAEGRGFQTPLMEDRKVEEQPSTA--- 60

Query: 61  EEKMGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRRRS--S 120
             ++  M R+QIGS+PPSCRRRCRECGG CEAVQVPVA+HDS+  +++ R +RR RS  S
Sbjct: 61  --ELVRMRRSQIGSQPPSCRRRCRECGGPCEAVQVPVAVHDSSHEKQRRRTRRRIRSHFS 120

Query: 121 RYFSVNSKHD-VALSSEDETSNYKPISWKCKCGNFIFNP 154
              S +SKH+ VALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 SEASSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP 152

[Close]
BLAST of Chy3G062550 vs. NCBI nr
Match: XP_004148430.2 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus] >KGN62787.1 hypothetical protein Csa_022255 [Cucumis sativus])

HSP 1 Score: 288 bits (737), Expect = 7.85e-98
Identity = 146/153 (95.42%), Postives = 148/153 (96.73%), Query Frame = 0 

Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAEAVEVATEEEEK 60
           MGSFQIWHRNRNKH+SILLLFLSVFILILVTSIEGRGIQAMEGERKSAE   VATEEEEK
Sbjct: 1   MGSFQIWHRNRNKHISILLLFLSVFILILVTSIEGRGIQAMEGERKSAE---VATEEEEK 60

Query: 61  MGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRRRSSRYFSV 120
           MGMMMRNQIGSRPPSCRR+CRECGGHCEAVQVPVALHDSNQNQRKGRRKRR  SSRYFSV
Sbjct: 61  MGMMMRNQIGSRPPSCRRKCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRS-SSRYFSV 120

Query: 121 NSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 153
           NSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 NSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 149

[Close]
BLAST of Chy3G062550 vs. NCBI nr
Match: XP_008444980.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo])

HSP 1 Score: 280 bits (716), Expect = 1.43e-94
Identity = 143/154 (92.86%), Postives = 146/154 (94.81%), Query Frame = 0 

Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAEAVEVATEEEE- 60
           MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAE V VATEEEE 
Sbjct: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEE 60

Query: 61  KMGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRRRSSRYFS 120
           KMGMMMRNQIGSRPPSCRR+C ECGGHCEAVQVPVALHDSNQNQ+KGRR RRR S RYFS
Sbjct: 61  KMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRR-RRRSSRRYFS 120

Query: 121 VNSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 153
            +SKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 DHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 153

[Close]
BLAST of Chy3G062550 vs. NCBI nr
Match: KAA0065061.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 280 bits (715), Expect = 2.11e-94
Identity = 143/155 (92.26%), Postives = 146/155 (94.19%), Query Frame = 0 

Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAEAVEVATEEEE- 60
           MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAE V VATEEEE 
Sbjct: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSIEGRGIQAMEGERKSAETVAVATEEEEE 60

Query: 61  -KMGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRRRSSRYF 120
            KMGMMMRNQIGSRPPSCRR+C ECGGHCEAVQVPVALHDSNQNQ+KGRR RRR S RYF
Sbjct: 61  EKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRR-RRRSSRRYF 120

Query: 121 SVNSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 153
           S +SKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 SDHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154

[Close]
BLAST of Chy3G062550 vs. NCBI nr
Match: XP_038886514.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Benincasa hispida])

HSP 1 Score: 209 bits (533), Expect = 9.04e-67
Identity = 123/155 (79.35%), Postives = 127/155 (81.94%), Query Frame = 0 

Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSI-EGRGIQAMEGERKSAEAVEVATEEEE 60
           MGSFQ WH  R KHVSI LLFLSV ILI VTSI EGRGIQ      +S E+ E A  EE 
Sbjct: 1   MGSFQNWH--RIKHVSISLLFLSVSILIHVTSIVEGRGIQGSLTTGRS-ESPETAAAEE- 60

Query: 61  KMGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHD-SNQNQRKGRRKRRRRSSRYF 120
           K GMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHD S+QNQRK   KR  RSS +F
Sbjct: 61  KAGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDLSHQNQRK---KRTSRSS-HF 120

Query: 121 SVNSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 153
           SVNSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 SVNSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 147

[Close]
BLAST of Chy3G062550 vs. NCBI nr
Match: XP_022131875.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Momordica charantia] >XP_022131876.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Momordica charantia])

HSP 1 Score: 179 bits (453), Expect = 1.59e-54
Identity = 99/154 (64.29%), Postives = 113/154 (73.38%), Query Frame = 0 

Query: 1   MGSFQIWHRNRNKHVSILLLFLSVFILILVTSI-EGRGIQAMEGERKSAEAVEVATEEEE 60
           MGS Q WHRN+ +H+SI LL LSV I + V S+ EGRGI     E +  EA     E  E
Sbjct: 1   MGSLQNWHRNK-QHISISLLLLSVSIFVDVISMAEGRGIPTPLMEGRKVEAAGSWPELPE 60

Query: 61  KMGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRRRSSRYFS 120
           K+GM+ R+QIGSRPPSCRRRCRECGGHCEA+QVPVALHDS QNQRK R      ++   +
Sbjct: 61  KVGMI-RSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQNQRKKRSSHFPAAAATSA 120

Query: 121 VNSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 153
             S  D+ALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 GASNKDMALSSEDETSNYKPISWKCKCGNFIFNP 152

[Close]
BLAST of Chy3G062550 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.0 bits (201), Expect = 4.5e-16
Identity = 54/133 (40.60%), Postives = 72/133 (54.14%), Query Frame = 0 

Query: 22  LSVFILILVTSIEGRGIQAMEGERKSAEAVEVATEEEEKMGMMMRNQIGSRPPSCRR-RC 81
           +S F+LIL+  +       M   R   ++VE     ++ + MMMR  IGSRPP C R RC
Sbjct: 7   MSSFLLILLI-LNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCERVRC 66

Query: 82  RECGGHCEAVQVPVALHDSNQNQRKGRRKRRRRSSRYFSVNSKHDVALSSEDETSNYKPI 141
           R C GHCEA+QVP         Q K        SS   S +    +  +  D+++NYKP+
Sbjct: 67  RSC-GHCEAIQVP------TNPQTKLHSPLTTSSS---SSSETIHLDYTRGDDSTNYKPM 126

Query: 142 SWKCKCGNFIFNP 154
           SWKCKCGN I+NP
Sbjct: 127 SWKCKCGNSIYNP 128

[Close]
BLAST of Chy3G062550 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 5.5e-06
Identity = 39/136 (28.68%), Postives = 63/136 (46.32%), Query Frame = 0 

Query: 19  LLFLSVFILILVTSIEGRGIQAMEGERKSAEAVEVATEEEEKMGMMMRNQIGSRPPSCRR 78
           LL L + +++L+T      +Q ++       + +VA  E+       + ++GS PPSC  
Sbjct: 9   LLLLPLILILLITPQVSSFLQPIQ----PPISPQVALIED-------KARLGSTPPSCHN 68

Query: 79  RCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRRRSSRYFSVNSKHDVALSSE-DETSNY 138
           RC  C   C A+QVP              R R  R + +     +   +L++  D+ SNY
Sbjct: 69  RCNNC-HPCMAIQVPTL----------PTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNY 122

Query: 139 KPISWKCKCGNFIFNP 154
           KP+ WKC C    +NP
Sbjct: 129 KPMGWKCHCNGHFYNP 122

The following BLAST results are available for this feature:
BLAST of Chy3G062550 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9T0686.3e-1540.60EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9LFT57.8e-0528.68EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
BLAST of Chy3G062550 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPQ01.3e-7495.42Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G372... [more]
A0A1S3BBM23.4e-7292.86Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103488159... [more]
A0A5A7VH434.5e-7292.26Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A6J1BQW98.3e-4264.29Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A6J1KP853.8e-3963.52Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
BLAST of Chy3G062550 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004148430.27.85e-9895.42EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus] >KGN62787.1 hypothe... [more]
XP_008444980.11.43e-9492.86PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo][more]
KAA0065061.12.11e-9492.26EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo var. makuwa][more]
XP_038886514.19.04e-6779.35EPIDERMAL PATTERNING FACTOR-like protein 2 [Benincasa hispida][more]
XP_022131875.11.59e-5464.29EPIDERMAL PATTERNING FACTOR-like protein 2 [Momordica charantia] >XP_022131876.1... [more]
BLAST of Chy3G062550 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G37810.14.5e-1640.60unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G10310.15.5e-0628.68unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 38..58
NoneNo IPR availablePFAMPF17181EPFcoord: 68..153
e-value: 1.7E-17
score: 63.1
NoneNo IPR availablePANTHERPTHR33109:SF68EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 2coord: 6..153
IPR039455EPIDERMAL PATTERNING FACTOR-like proteinPANTHERPTHR33109EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4coord: 6..153

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G062550.1Chy3G062550.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010052 guard cell differentiation
biological_process GO:0010374 stomatal complex development
cellular_component GO:0005576 extracellular region