Chy3G062120 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G062120
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	la protein 1
Location	chrH03: 15420699 .. 15431450 (+)
RNA-Seq Expression	Chy3G062120
Synteny	Chy3G062120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAATACTTCTCTAGATCAAGAAATGGCTAAGAAAGTGCTTCGTCAGGTAAAATGGATTAATTTTGTTCTTCATTATGTTTAACTCAATCGTTTCTAATTGTTCATCGCTTTAATTTTGCAGGTCGAGTTCTACTTCAGTGACAGTAATCTTCCTAGAGATACTTTTCTTAGGAAAACCATCAGTGAAAGCCATGATGGAAGTATCCTTCACATTCTGATCATACTTGTTTTTAAACGATTTTCATCTGTTGTTCTGTTTAATTTGCTTTTAGTATTGATGGTCTATTGTATTTCGGGTTTTGTATTGTATTAATATCTAATTTGGATTAGGATTGTTGCCTTTTGTTGATCTTAACCGTGTAATTACAGTGGTCGATCTGTCTTTAATCTGTACGTTTTCTCGGATGAAAGGCCATCTTGAATTGAAACAAGATGTGACACCAGAAAACTTTCCAGAAGATACTATGAAGGCTGTCGCTGAAACTCTAAGAACTTCTTCATCACTTAAAGTGTCTGAAGATGGTTAGTTCTTTTGCATTCAAGTGATGTAATTCGTCATTTATCTGAATGCCAAGTAGTTGTGGAGTTTTTCTTTGTCATTATGTAGCATGAAATGCAGAGTTTGGAGTTATGGAAAAACAATCTCATGTTCTAGCCATTATCGCATGTAAGACTTGAACGATTACATTACACAATTTCATGAAAGAAGAAGAAACTTAGTTAGCAAAAGTGAAAGTTAGGGTTTCAATTTTGTGGAAAGGTTGGTCTAAATGTTGACATCATCTGTCTAATAAAATCATGCAAAATCAAGTGAATTCATTCTCTACCCATTGGTGCATCTTTATGACTATGTCTAATTGGATTACACAATTTCATGAAAGAAGAAGAAACCTATTTAGCAGGTGTAAAAGTTAATGTTTCAATTTTGTTGATAGGTTGGTCTAAATGTTGACATTGCCTGTCCCGAACAAATGGTAAAAAAATAAGAATGTTAAATGTTATAAATTCTCATGTTAACTGCTTATATTGGAGATGCAGAGCGATAGAGTCCTTAAAGTTTTAAATATTAAAGCACTTCATTTTTAGAATTTCAGATAAGCTCTTGCTCTACGATTAACTTTTGTATCTGATTCCAAATTAAGGATTGTTGTGGATTTTATTGTCATTATTTTGAATTTGTGTTTGGATGGTTTAGGGAAGAAGGTTGGTAGAGCTACTGAACTCCCAAAGCCTGAGGAGTTAATAGAACAATTGGATGATAGAACTGTAGCTGCATCACCATTTGAATATGATATCAAGCTTGAAGATGTAGAAGCTTTCTTTAATCAAGTTACAAAGGTACGTTTCTTTTTCATTTATGTTAATTTCTATATTTTATTCCTGATATCCTTGTTGGTGTCTACATGTGAATGTTTTTGTTTCATTATCGGCTTCAGAATGCCCTTAGTGTTAGCTAAGATTACCATGAAGCAGCTCAAGCAGCAGATTCTATTCTGGAATGTGCGACCTAAAAACTGCAAGTTTTTTTCCCTCTACTACCTACCGTGGCTAATGTGTAAGACCCCCAATCATTCACACATATAAAAGGAGGGGCAGAAAAGTAAATGGACAAATAACTAATGATGAAGGAATGATAGGAGGAGATCGTGAGTGTGGGGCCCAGACATAGAAATAGAAGGATCATGAGAGTAGGAATATAAATAGGTCTTTTAGGTTTAGGAGGAGGTAGGCTTTATTTTTATCCTTACATTGGCGGCTGCTTAGCCTGGGGAATTATCCAGCCATTCCAAGAGGAAGCTGGGTTTGTCTTTATTGTTCTTTTGTTTCCTTTTGAATCCTTATGACCAGTGTACTGATTTTGGCTATATATAAATAAAGATAACAGAGTGCTGCCTCTGTTTTGCCATTGTAAGGGAGAAATACTTAAGTATTCAAGTAGAAACCTTACACTTGGTATCAGAGCCACCACACTGGGGGTGGTCACGCGTCTGATGGCTCAGAGACAAATAGAGGAGCGGGTAGAAGGAACGGAAAAGGAAATTATGAGTTTGAAGGAGATGAAGAAATCGATGGATCGAATGACGGATGAGCTGAGAGAAAACCATAGCTTCAAAAGAAGAGAAGAGGCCGGAACTACTGAAGGTGCGATGTTGAAACTGAAGGAAAAGCTTGAAGATACAGAAACTACCGCGGAGTATGGAGGAGGCAACGTAGACCGAAGTAAGTACAAAAAATTAGAGATGCCAGTGTTTACAGGGGTGAACCCTGAATCTTGGGCCTACCGAGCGGAACATTTCTTTGAGATAAACAACTTGTCGGAAGCTGAAAAGGTCAAAGTAGCAGTCGTTAGTTTTGGACAGGAGGAAGTTGATTGGTTTAGGTGGAGTCATCATCGAAAGAGGGTGGAATCTTGGGAGGATTTGAAGGAGAGGATGTTCGACTTCTTTAATGATACGAGACAGCAGAGTTTGGGGCAAGACTAATCCGTATCAATCAAGAAGGGTCATATAGCGATTATGTTAAGAAATTTGTTACATATTCAGCTCCCCTCCCTGACATGGCCGAAAGTGTTCTGCAGGACGCGTTTCTGACGGGTCTGAAGCCAGCACTGCAAGTGGAAGTGATCAGTAGACACCCTCAAACTTTAGAGGAGTGCATGAAGGAAGCTCAATTGGTGAATGATAGGAATATAGCATTAAAGCTGGCAATGGAAGAGATGGATAAGGTTGAGCCCAAAAGAAGTGGGAAGGTAGAAACAAAGAAGACCGAGTTTGCTATGAAGCAGGTAACTGTTCCACTAAAAGGCGATTACCAAAAAAAAAGTCCCCCCCAATTAAAAGACTGTCGGACACGAAATTTAGAGCAAGGCTGGATAAAGGGCTTTGTTTCAAGTGTAATGAAAAGTACTCCCCTGGCCATAGATGTAAAGGCAGAGAAAAAAGAGAGTTGATGCTCCTTATACTAAATGAGGAAGAGGATAACGAAAGGGAAGTAAGTACAAAAGATGAGGCAGGCAAAGTAATAGAACTGAATCAATTGGAGTTGAATGAGGATACCCCTATTGAATTAAGGTTGATCACTGGTGTTACATCCAAGGGAACTATGAAATTGAAAGGACATGTGAATGGAAAGGAGGTAATCATCCTGATTGACAGTGGTGCTACCAATAACTTCATCAGTTAAGTGTTGGTAGATGAACTGCAACTGAGCATTGATCCGGGGACTCAATTTGGAGTTACCGTTGGGGACGGCACCCGATGTGAAGGAAGAGGAATTTGTAAGAGGGTAAAAGTGAAGTTGAAGGAGTTAACGATCGTAGGCGACTACCTGGCGGTAGAATTAGGAAAGGTAGACTTGGTGTTAGGAATGCAATGGTTGGATTCGACGGGAACCATGAAGGTACACTGGCCATCTCTAACCATGATGTTTTGGAAGAAGGGTAGAAGAATAATCCTAAAAGGGGACCCTTCTCTAACTAAGTCAGAATGTTCGTTGAGAACCATAGAGAAAACATGGAAATCTGGGGACCAAGGGTTTCTCTTAGAATTTCAAAATTATGAAGTGGATTGTGAAGGCGAATCAGAAACAGAAGCCGAAATGAAAGGAGAGGAGGAAGGGTTACCCATGGTTCAATGACTGCTCGAGCAATATGCAGACATCTTTAGGCTGCCTACAGGGTTACCTCCAAAGAGAACCATAGACCATCGTTTTTTGACTTTACCCGATCAGAAACCTATTAATGTTCGACCATATAAGTACGGGCATATACAAAAAGAAGAAATTGAAAAATTGGTGTTAGAGATGCTACAGGCAGGGGTTATTTGACCATGCCACAACCCATATTCGAGCCCGGTACTCTTGGTGAAGAAAAAAGATGGGGGTTGGAGATTTTGCGTAGACTACCGTAAGCTTAATCAAGTAACCGTGGCTGACAAATTTCCAATCCCAGTGATTGAAGAACTCTTAGATGAACTTCATGGGGCGACGGTTTTCTCGAAATTAGATCTTAAATCTGGGTACCATCAGATAAGAATGAGGGAGGAAGATGTGGAGAAGACAACTTTTGCGCACGAAGGACATTATAAGTTCTTGGTGATGCCCTTCGGTCTTACGAATGCCCCAGCCACCTTCCAATCTCTCATGAACGAGGTATTCAAACCATTCCTTAGGAGGTGTGTCCTGGTATTTTTTGATGACATTTTAGCTTATAGTGAGAATATTGATGAGCATATGAAACATCTAGGGATGGTATTCGCTATATTGAGGGATCATAAGTTGTTTGCAAATAGAACTAAATGTGTAATTGCTCATTCCCAAGTTCAATATTTGGGACATCTGATTTCCAGCAGAGGAGTGGAAGCTGACGAGGAAAAAATTCGTAGTATGATCAATTGGCCACGGCCGAAAGATAATAACGGGGCTAAGGGGATTCCTTGGACTGACTGGATACTATAGAAGATTTGTGAAAAGCTATGGAGAGATAGCCGCGCCCTTGACTAAACTACTTCAAAAGAATGCATTCAAGTGGAATGAGGAAGCCACGGCAGCTTTTGATCAATTGAAGTTAGCAATGACAACCATACCCGTGTTAGCATTGCCTGATTGGTCTCAGCCCTTCACGGTCGAAACTGATGCTTCAGGAGTAGGTTTAGGCGCGGTTCTATCACAAGATGGTCATCCAATCGCATTCTTCAGTCAGAAACTGTCCCTAAGGGTCCAGGTTAAGTCAATTTATGAAAGGGAATTGATGGCTGTTGTCCTTTCAGTGCAAAAATGGAGGCATTACCTCTTGGGCAGAAAGTTCACGATTATTTCAGATTAGAAGGCTCTGAAATTTCTGTTGGAACAGAGAGAAGTTCAGTCTCAATTCCAAAAGTGGCTAACAAAACTCTTGGGGTATGACTTTGAGATTCTGTATCAGCCGGGTCTGCAAAATAAGGCTGCGGATGCACTCTCAAGGAAGGACCAAACAGTTAAGTTAAACACAATGACGACCACGGGCATCGTTGATGTAGAGCTTATAGAGAAGGAAGTCGAGAGGGGATCAAGAACTTCAGAAAATTATTGCCGAACTTAAAAGAGGGGTGGATCAGGGAGGAAAATACCAGTGGAACAATGGCAGATTGTTATATAAAGGAAGGATAGTGTTGTCGCGTAATTCCTCCCTCATCCCGAGGCTTTTACACACGTTCCATGACTCTATACTAGGGGGGCCCTCGGGATTCTTGAGAACTTACAAAAGGATGAGTGGGGAATTATTTTGGAAGGGATTGAAGGCAGAGGTAAAGAGATATGTGAAAGAATATGACATATGTCAACGCAACAAATTTGAAGCTACCAAGCCTACTGGAGTTCTACAACCCATTCCTATTCCCGACAAGATATTGGAGGACTGGACCATGGACTTCATCGAAGGTCTGCCCTTAGCAGGAGGATACAATGTAATTATGGTAGTCGTCGATCGCTTAAGTAAGTACTCCTATTTTTTGACTCTTAAACACCCCTACACAGCCAAGCAAGTAGCTTCCATTTTTTTAGAAAAAGTGGTAAGCAAACATGGAATTCCCAAGTCCATTATTACCGACCGAGATAAGATCTTCCTTAGCAATTTCTGGAAGGAATTGTTCACCACCATGGCACAATTTTGAAGAGAAGCACGACATTCCATCCCCAAACTGATGGACAAACCGAGAGGGTAAACAGATGCCTAGAAACCTATTTGAGATGTTTTTGCAACGAGCAACCGAAGAAATGGGATAAACTAATCTCTTGGGCTGAATTATGGTATAACACAACCTTCCATGCGTCCACCAAAACTACCCCTGACCAATCAGTTTTTGGACGAATTCCCCCTCCATTGCTGTCGTATGGGTGGAAGAAATCTCCTAATAATGAGGTAGAAGTCATGTTGAAGGAGAGAGATTTGGCTATCAATGCCTTGAAAGAAAACCTATGCATAGCTCAGAACAAAATGAAGAAAATGGCAGACCGGAATCGCAGGGAACTCAAGTTCAAAATCGGGGATGAAGTGTATCTGAAACTACAACCCTATAGACAAAGATCATTAGCTAGAAAGAAATGTGAAAAGCTAACCCCGAAATTTTATGGACCATATGAGATTATTGAGGAGATAGGAGAGGTCGCATATCGGTTGAAACTACCGCCATAGGCTGCCATTCACAATGTTTTCCACATTTCTCAACTGAAACTGAAGTTGGGAAAACAACATGTAGTCCAGCAACAACAACCTATTCTAACCGAGGATTTTGAATTACAACTGTGGCCAGAAAACGTGCTAGGAATACGATGGAACAAGGAGTTAGGAGGAAATGAGTGGCTAGTCAAGTGGAAGAATCTACCAGATAGTGAAGCTACATGGGAATCAGTTTACCTATTGAACCAGCAGTTTCCTCACTTTCACCTTGAGGACAAGGCGAACTTAGAACCCCGGGGTATTGTAAGACCCCCAATCATTCACACATATAAAAGGAGGGGCAGAAAAGTAAATGGACAAATAACTAATGATGAAGGAATGATAGGAGGAGATTGTGCGTGTGGGGCCCAAGCACAGAAATAGAAGGATCATGAGGGGAGGAATATAAATAGGTCTTTTAGGTTTAGGGGGAGGTAGGCTTTATTTTTATCCTTACGTTGGCGGTTGCTTAGCCTGGGGAATTATCCAGCCATTCCAAGAGGAAGCTGGGTTTGTCTTTATTGTTCTTTTGTTTCCTTTTGAATCCTTATGACCAGTGTACTGATTTTGGCTATATATAAATAAAGATAACAGAGTGCTGCCTCTGTTTTGCCATTGTAAGGGAGAAATACTTAAGTATTCAAGTAGAAACCTTACATAATGCTCTTTTGAATAACTTTGGAGTAGTTTCCTCTACTGAACAATTTCGTAAATAATTGTTGAAATTTTGACTATTGAAATGCAATTCTTTGATTCGTTCCAAATTTTGGAAAATTTAAATTATGAAATGCTGTACTTTGATTCATGTCTAAATGGTTTAGGTCCCGTTTGGTAACTATTTCGTTCTTTTTTTTTTTGTTGGTTTTTGAAAATTATGCATATAAACATCCCTTCCACCTCTTAATATCTTGCTTTAATATCTAATTTTTACACATATTTTTAACAACTAAGTCAACATTTGAAAACTAAAAAGTAGCTTTTATAAATTTGTTTTTGGTTTTTGAATTAGTCTAAGAATGCAAATCTTTGACTTAGGATCGATACAAACCATGGTAAGAAAATGAAATAAAATAACCTTATTATTTTATTTTATCCTGTTCTGTTAGTCTTATATTGTATGGTTATTATCAGTATTGGATTGTATGAGTAAAAAAGGAATGGGGCTAAAAACGAGTTAACTTGTTCATCTGAATTGGAAATGAGTGTAATTGTGCCATTTAGAAGGTTGAATGGTAAAAATATTGTTAATTGCTACTTCCAATCCAAGAAACTGAAAAAAGAAGTTTAAAATAAAAAATACCATTGTCTGCGGTCAAGTGTAGAGGTACACGCTATAGAAGGAAATAAAGGAACTATGAAAAAAATTGTAAATTAAAATTAAAATTAATTAGGTGGCTTTTGTTTCTATTGTTCGTTTTCGAATGTTTTTTCCCCTCTCACAATGTATATCACATCATATTGGTTTAATAGTTTAAACTTCTTTTTAATGTTTTTTCCTACATATTTTAAAGTTATTTACTGTTTTTATCAAATTGAAACTTACCATACACTATGTTGCGATGCTTGATAAACGGACGTTTGATTTATACTCCTTCCATTTCCCATTGTCAAAGTATCTATTTTTCCCCCTATTTATATTGTCAACAAAATTTTAGAACTTTGCTATTGAATTTCAGGTTAATAGTGTGAGGCTGCCCCGTCATGTTGCAGATAAACGGGTATTCTGTGGAACTGCCTTGATAGAATTTGCTACTGAGGAAGATGCAGAAAAAGTTTTGAAGGAAAGCTTGGTTTATGCTGGCGCCAAGTTAGAATTGAAACCAAAGTATGTATGATTTGAAATACATCTACATTTTCTTCCAACTCTTTTGCTTCACAATCAAAGATCCTCCTGGTTTATCGGTCATAAACTCATTTTAAGTACGAAGCAATAGTCAAAACATGCATTTAAAATTGTAAGAATTATAATTGCAATTGCATAAATTGTTGCAATCTTAAATTTAACTTAGTTTAATGATTCTAAAACCATTCTAAATGTTGTAAACAATAATCAATTGAATTTGCATGTTCTTTGACTTCTTCTTCTGTCCTTTTTGAGAGGCTCATTGGTAAAACCATTATAGGCTGACTAAATGATAACTGCCAGATTCCATACTATGTTTAGGATGTATCGGTAAGTTTATTTCTGTATTATGTAAAATAGTTGGTTATTCAATATTTATTCTTTCAGCCATCGTTCATGTGTGTTTGAACTTTGATCCTTAATATCTTCTAGAAAGGTGGAAGCCTAATTTTCTTTTGTGAATTGTGATTATATTTTAAAAAAAATTACTTTTCTAATTGATATCTATTCGAAAGTGTATTGGTCACCAAGCTTCTTTGTAAATTTTAAGCATTCATAATATATTCCCTTTGACATATCAGTCAACTGCGTTTGTAAAGATTATTTCTATTTCAGGAGGGAATTTGATGAGGAGAGAGCAAAAGAGATGGAGAAGTTTGAAATTTCACGCTCAACCTCAGGTGCCAACCGCAGCAACAATAATAGTTCCCCAGAATCAAGGTATGTAGGACACTGGTAGTAATCTGTAGTATATTTAGCCGTACACTTCTCTTTCCACATCACATGATCGATCTTATGGATTTTCATTGCAGCTACCCTAAAGGCTTAATTGTTGCCTTTACATTGAAAAGCACGTCATCTGGAAGTTCTGCTGAGGGAAGTGAATCTCATGGTGTAGCTGCTGATAAGACTGAATGCAAAACAGATGAAGGGCTAGACTCCTCAAAGAATGACTCTGAGAAAACTGAGCAAATAGAGGAAACAAATTTGAGTAAAGATGAAGAAATTAAGGAAAGTGCTGATGATAAGAATGGAGAGGCTGTGGAGAAAAATGATTCCGGCAATGAAAAAAGTCTTGAAGTGGAAGAACAGTCTATGGACGATACCATAGATGAACATGAAGAGGCTGAAGAAAAACCCACAGCTTTTCAATCTAGGAACAATATGAATGTTGTTTCGCGTGAGGATTTGAAGGCTGTTTTTCGGAAGTTTGGAAATGTTAAGGTATCTCATAGTTTCTTCCTCGTACTATGCTCTATGGAATGTTTCAATATTATTTATTTTGAATTTTTTTTGTTCTCTACTTTATCTATTAGTTATTCTTCTCCTCTGTTTGTGCTTTACATCATGTCATGGGATCCTAGTTTTTCTTGCATTATTAATTTTTTATATTTCACTCATTCTACCCTAGAATTTTACCCTAATGATGTAAGGGGAGATCTCTTTTTTATTATTATGTTGTTTTTTTTTTTCAAATTATCACTTTGGCTAGATTCCTTACTTTGATTTGTGCTTTTCATGTTTTTTTCACTTTTCACTTTGTTTATTTCTTATTCACTCTGACGTGTTTTTCCTCTCGCATATTTGGTTGGAATTGTCAAGTTCATTGATTTTAAGATTGGAGACGAGTCGGGCTATATAAGGTTTGAGGAGCCTGAAGCTGCCCAGAAAGCTCGTGCGTCAGCAGTACTAGCTGAGCAAGGGGGACTGGCTGTGAAGAATTTTATAGCCACTTTAGAACCAGTGTCAGGTATAATACAAAATTTCACTGTTCTTTGAGCAATGAGTAAAGTAATGTCTGTAGGTGTTTTTCTATTGTCGGTCTTGATCGAAAAGATCTATTAGCAACATCAATTGGCATGGTGTATTTTAAAATTAGTTAAAATTGAACATAGTGATAGTAGCTCTATTTTGTTTCTCTTCTCTTGGTTAATAAACTTTTGGAATTTTACCAACTCCACTTTTTGGAATTTGTTGCATCTTTTTTTCTGTTTATCTGCAAATAACTTTGGAAATCGTTAATGCTGGTAAGTGACTTTTCGTAATTCCATGTTATTCCTTGTTCTTTCCCATAACTTTATATAATTGACTTGGGGAGAGGAAGCGTATTTCTGAAGTTATAATATTCATCATGTTTGTCAATGCTTTTGGATGACTTCATATTTGATGAAATTGAAGTTACTCCCGTTCTCCTTTTTACAATTTTGGTTGAAATCCTTTATTTCAGGTGAGGCTGAGAAGGAGTATTGGAGTCTACTCCGCAGCAACCAAGAGAAGCATCATCGCGACTTTAAGGGAAACCGTGGAAGGTTTGCTCACTACATAACTAAGTATTAGTGTCTATTGATAACCATTTTGTTTGTTGTATGTACCTTCCTCATAAACACACACATTTCAATTCTAATCTAAATTAAAAGCAAAATCAGGTTTTTAAAAAAGCAAACACAATTTTCAAAAACAAAAAACGGTTATCAAAACGAGAAGTGTTAAACAAAAAGGTTATCAAACGTAATCTAACCTAATAGTGTTATTTGTATATGTTACTACTCTCTCACTGGATCTTTCTCTTGGTCTCTTTCATAATCTTCCTATGGTTTTCTCCTGCTTGCTCTATCCATAGGGGTGGCAAATTCAATCGAGGTGGAAAGCACGGACGATCGAGGGGGCATGACAACCATCGAGGTCGCCCTAACAAAGCTCAAAAGGTTTAA

mRNA sequence

ATGGGGAATACTTCTCTAGATCAAGAAATGGCTAAGAAAGTGCTTCGTCAGGTCGAGTTCTACTTCAGTGACAGTAATCTTCCTAGAGATACTTTTCTTAGGAAAACCATCAGTGAAAGCCATGATGGAATGGTCGATCTGTCTTTAATCTGTACGTTTTCTCGGATGAAAGGCCATCTTGAATTGAAACAAGATGTGACACCAGAAAACTTTCCAGAAGATACTATGAAGGCTGTCGCTGAAACTCTAAGAACTTCTTCATCACTTAAAGTGTCTGAAGATGGGAAGAAGGTTGGTAGAGCTACTGAACTCCCAAAGCCTGAGGAGTTAATAGAACAATTGGATGATAGAACTGTAGCTGCATCACCATTTGAATATGATATCAAGCTTGAAGATGTAGAAGCTTTCTTTAATCAAGTTACAAAGGTTAATAGTGTGAGGCTGCCCCGTCATGTTGCAGATAAACGGGTATTCTGTGGAACTGCCTTGATAGAATTTGCTACTGAGGAAGATGCAGAAAAAGTTTTGAAGGAAAGCTTGGTTTATGCTGGCGCCAAGTTAGAATTGAAACCAAAGAGGGAATTTGATGAGGAGAGAGCAAAAGAGATGGAGAAGTTTGAAATTTCACGCTCAACCTCAGGTGCCAACCGCAGCAACAATAATAGTTCCCCAGAATCAAGCTACCCTAAAGGCTTAATTGTTGCCTTTACATTGAAAAGCACGTCATCTGGAAGTTCTGCTGAGGGAAGTGAATCTCATGGTGTAGCTGCTGATAAGACTGAATGCAAAACAGATGAAGGGCTAGACTCCTCAAAGAATGACTCTGAGAAAACTGAGCAAATAGAGGAAACAAATTTGAGTAAAGATGAAGAAATTAAGGAAAGTGCTGATGATAAGAATGGAGAGGCTGTGGAGAAAAATGATTCCGGCAATGAAAAAAGTCTTGAAGTGGAAGAACAGTCTATGGACGATACCATAGATGAACATGAAGAGGCTGAAGAAAAACCCACAGCTTTTCAATCTAGGAACAATATGAATGTTGTTTCGCGTGAGGATTTGAAGGCTGTTTTTCGGAAGTTTGGAAATGTTAAGTTCATTGATTTTAAGATTGGAGACGAGTCGGGCTATATAAGGTTTGAGGAGCCTGAAGCTGCCCAGAAAGCTCGTGCGTCAGCAGTACTAGCTGAGCAAGGGGGACTGGCTGTGAAGAATTTTATAGCCACTTTAGAACCAGTGTCAGGTGAGGCTGAGAAGGAGTATTGGAGTCTACTCCGCAGCAACCAAGAGAAGCATCATCGCGACTTTAAGGGAAACCGTGGAAGGGGTGGCAAATTCAATCGAGGTGGAAAGCACGGACGATCGAGGGGGCATGACAACCATCGAGGTCGCCCTAACAAAGCTCAAAAGGTTTAA

Coding sequence (CDS)

ATGGGGAATACTTCTCTAGATCAAGAAATGGCTAAGAAAGTGCTTCGTCAGGTCGAGTTCTACTTCAGTGACAGTAATCTTCCTAGAGATACTTTTCTTAGGAAAACCATCAGTGAAAGCCATGATGGAATGGTCGATCTGTCTTTAATCTGTACGTTTTCTCGGATGAAAGGCCATCTTGAATTGAAACAAGATGTGACACCAGAAAACTTTCCAGAAGATACTATGAAGGCTGTCGCTGAAACTCTAAGAACTTCTTCATCACTTAAAGTGTCTGAAGATGGGAAGAAGGTTGGTAGAGCTACTGAACTCCCAAAGCCTGAGGAGTTAATAGAACAATTGGATGATAGAACTGTAGCTGCATCACCATTTGAATATGATATCAAGCTTGAAGATGTAGAAGCTTTCTTTAATCAAGTTACAAAGGTTAATAGTGTGAGGCTGCCCCGTCATGTTGCAGATAAACGGGTATTCTGTGGAACTGCCTTGATAGAATTTGCTACTGAGGAAGATGCAGAAAAAGTTTTGAAGGAAAGCTTGGTTTATGCTGGCGCCAAGTTAGAATTGAAACCAAAGAGGGAATTTGATGAGGAGAGAGCAAAAGAGATGGAGAAGTTTGAAATTTCACGCTCAACCTCAGGTGCCAACCGCAGCAACAATAATAGTTCCCCAGAATCAAGCTACCCTAAAGGCTTAATTGTTGCCTTTACATTGAAAAGCACGTCATCTGGAAGTTCTGCTGAGGGAAGTGAATCTCATGGTGTAGCTGCTGATAAGACTGAATGCAAAACAGATGAAGGGCTAGACTCCTCAAAGAATGACTCTGAGAAAACTGAGCAAATAGAGGAAACAAATTTGAGTAAAGATGAAGAAATTAAGGAAAGTGCTGATGATAAGAATGGAGAGGCTGTGGAGAAAAATGATTCCGGCAATGAAAAAAGTCTTGAAGTGGAAGAACAGTCTATGGACGATACCATAGATGAACATGAAGAGGCTGAAGAAAAACCCACAGCTTTTCAATCTAGGAACAATATGAATGTTGTTTCGCGTGAGGATTTGAAGGCTGTTTTTCGGAAGTTTGGAAATGTTAAGTTCATTGATTTTAAGATTGGAGACGAGTCGGGCTATATAAGGTTTGAGGAGCCTGAAGCTGCCCAGAAAGCTCGTGCGTCAGCAGTACTAGCTGAGCAAGGGGGACTGGCTGTGAAGAATTTTATAGCCACTTTAGAACCAGTGTCAGGTGAGGCTGAGAAGGAGTATTGGAGTCTACTCCGCAGCAACCAAGAGAAGCATCATCGCGACTTTAAGGGAAACCGTGGAAGGGGTGGCAAATTCAATCGAGGTGGAAAGCACGGACGATCGAGGGGGCATGACAACCATCGAGGTCGCCCTAACAAAGCTCAAAAGGTTTAA

Protein sequence

MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHLELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVAASPFEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESLVYAGAKLELKPKREFDEERAKEMEKFEISRSTSGANRSNNNSSPESSYPKGLIVAFTLKSTSSGSSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTEQIEETNLSKDEEIKESADDKNGEAVEKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRKFGNVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKEYWSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV*

Homology

[Close]

BLAST of Chy3G062120 vs. ExPASy Swiss-Prot
Match: Q93ZV7 (La protein 1 OS=Arabidopsis thaliana OX=3702 GN=LA1 PE=1 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 9.3e-118
Identity = 255/471 (54.14%), Postives = 327/471 (69.43%), Query Frame = 0


Query: 6   LDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHLELKQD 65
           L +E AK VLRQVEFYFSDSNLP D FL+KT++ES DG+V L+LIC+FS+M+G+L+L  D
Sbjct: 6   LTEETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKL-GD 65

Query: 66  VTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVAASPFE 125
              ++ PEDT+KAVA+TLRTSS+LK+S+DGKKVGR+TEL K E+LIEQL+ RTVAASPF 
Sbjct: 66  SKGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAASPFS 125

Query: 126 YDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESLVYAGA 185
           YD+K EDVE+FF+Q  KVNSVR+PRHVA+ R+F G AL+EF TEEDA+ V+K++LV+AG 
Sbjct: 126 YDVKREDVESFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQNLVFAGQ 185

Query: 186 KLELKPKREFDEERAKEMEKFEISRSTSG-ANRSN-----NNSSPESSYPKGLIVAFTLK 245
           +LELKPK+EFD ER K+  KF   +   G AN+ N     NNS+ E  YPKGLI++FTLK
Sbjct: 186 ELELKPKKEFDNEREKDEVKFANYQPQKGSANQKNGSDHKNNSAYEPDYPKGLIISFTLK 245

Query: 246 STSSGSSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTEQIEETNLSKDEEIKESADDK 305
            ++                      +EG    K+  E T++  E + +K  +  ++  + 
Sbjct: 246 RSA----------------------EEGTTEQKSSEEPTDKTMEESETKPADTPDADKEN 305

Query: 306 NGEAVEKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRK 365
            GE                    +   DE +E EEK      ++N +VV REDLKAVF K
Sbjct: 306 TGEV-----------------QAEGAEDEDDEKEEKGALATHKDNKDVVLREDLKAVFGK 365

Query: 366 FGNVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKE 425
           FG+VKF+DFK+G E+GY+RF+EPEA+QKARA+AVLA +GGLAVKNFIA LEPV GEAEKE
Sbjct: 366 FGDVKFVDFKMGSETGYLRFDEPEASQKARAAAVLANEGGLAVKNFIAVLEPVIGEAEKE 425

Query: 426 YWSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV 471
           YW+LLRS   K   D  G  GRGG+  RGG+ GR RG D+  GR NK+QKV
Sbjct: 426 YWTLLRS---KDRFDKGGRGGRGGR--RGGRFGRKRGSDSPGGRWNKSQKV 431

[Close]

BLAST of Chy3G062120 vs. ExPASy Swiss-Prot
Match: Q0V7U7 (La protein 2 OS=Arabidopsis thaliana OX=3702 GN=LA2 PE=1 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 4.7e-69
Identity = 176/439 (40.09%), Postives = 256/439 (58.31%), Query Frame = 0


Query: 4   TSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHLELK 63
           +S ++E AKK+L QVEFYFSDSNLP D FL + +++S DG+V L L+C+FSRM+  L L 
Sbjct: 3   SSFNEETAKKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNLLGL- 62

Query: 64  QDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVAASP 123
            ++  E+ P   ++ VA  LRTS  LKVS +G+++GR T+L KPEE++EQ+  RT+AASP
Sbjct: 63  GNINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASP 122

Query: 124 FEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESLVYA 183
           FEY IK+EDV +FF+Q  KVNSVRLP ++ADKR FCGTAL+EF++E+D + +L++SLVYA
Sbjct: 123 FEYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSLVYA 182

Query: 184 GAKLELKPKREFDEERAKEMEKFEISRSTSGANRSNNNSSPESSYPKGLIVAFTLKSTSS 243
           GA L L PK +FD +R   +++        G + S+N       + +G IV F LK  +S
Sbjct: 183 GADLVLIPKSDFDCQRENMIKQL-------GKSESHN------EFRRGQIVKFALKWIAS 242

Query: 244 GSSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTEQIEETNLSKDEEIKESADDKNGEA 303
                                           EK    E+ +  K+ +IKE  D + G A
Sbjct: 243 -------------------------------EEKVTNKEKPSALKN-KIKEKEDKETGIA 302

Query: 304 VEKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRKFGNV 363
             + ++G+     + + + D  +                NN N VS E LK +F++FG+V
Sbjct: 303 DREKENGDNSCASLCKDNTDQLV------------VPPWNNSNSVSSEVLKDLFQRFGSV 362

Query: 364 KFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVK-NFIATLEPVSGEAEKEYWS 423
           + I++  G +SGY+ F + E A KARA+      GGL VK NF   LE ++GE E+E W 
Sbjct: 363 EHIEYSGGLDSGYVWFTDSETAMKARAAVEFV--GGLVVKNNFSVALEAINGEMERELWK 381

Query: 424 LLRSNQ----EKHHRDFKG 438
            L S +    ++ H+  KG
Sbjct: 423 RLSSAELEGGKEGHKKEKG 381

[Close]

BLAST of Chy3G062120 vs. ExPASy Swiss-Prot
Match: P33399 (La protein homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=LHP1 PE=1 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 2.0e-19
Identity = 94/276 (34.06%), Postives = 136/276 (49.28%), Query Frame = 0


Query: 9   EMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHLELKQDVTP 68
           E+  + L+QVEFYFS+ N P D FLR T +E +DG V +S I TF+RMK +  + +    
Sbjct: 28  EVLDRCLKQVEFYFSEFNFPYDRFLR-TTAEKNDGWVPISTIATFNRMKKYRPVDK---- 87

Query: 69  ENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATEL---PKPEELIEQLDDRTVAASPFE 128
                     V E LR+S  L+VS DG+ V R   L         IEQ + RT+A   F 
Sbjct: 88  ----------VIEALRSSEILEVSADGENVKRRVPLDLTAARNARIEQ-NQRTLAVMNFP 147

Query: 129 Y-DIKL-------EDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLK 188
           + D++        E++EAFF ++ ++N VRL R   +K+ F GT L+EF T  + E  LK
Sbjct: 148 HEDVEASQIPELQENLEAFFKKLGEINQVRLRRDHRNKK-FNGTVLVEFKTIPECEAFLK 207

Query: 189 ---------ESLVYAGAKLELKPKREFDEERAKEMEKFEISRSTSGANRSNN-NSSPESS 248
                    E L Y G KL +  K++FD +R       E S+S + + RS + N   + +
Sbjct: 208 SYSNDDESNEILSYEGKKLSVLTKKQFDLQR-------EASKSKNFSGRSRSFNGHKKKN 267

Query: 249 YPKGLIVAFTLKSTSSGSSAEGSESHGVAADKTECK 264
            PK     F      +G      +S  +A D  E K
Sbjct: 268 LPK-----FPKNKKKNGKEESKEDSSAIADDDEEHK 274

[Close]

BLAST of Chy3G062120 vs. ExPASy Swiss-Prot
Match: Q7ZWE3 (La-related protein 7 OS=Danio rerio OX=7955 GN=larp7 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 4.9e-10
Identity = 121/514 (23.54%), Postives = 213/514 (41.44%), Query Frame = 0


Query: 8   QEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHLELKQDVT 67
           +++   V +QVEF+F D NL +D F++  I +S DG +D++++ TF+RMK    L  DV 
Sbjct: 40  KQLLSDVKKQVEFWFGDVNLHKDRFMKSIIEQSRDGYIDIAVLTTFNRMK---NLTADV- 99

Query: 68  PENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVAASPFEYD 127
                    K +A  L+ S+ ++V+++G ++ R   L    E  + +D RTV        
Sbjct: 100 ---------KLIARALKNSTIVEVNDEGTRIRRKEPL---GETPKDVDSRTVYVELLPKT 159

Query: 128 IKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEK---VLKESLVYAG 187
           +    +E  F++   V  + +PR+    R   G A +EF T+E A+K   +L      A 
Sbjct: 160 VTHIWLERVFSKCGHVVYISIPRY-KSTRHSKGFAFVEFETQEQAQKAVEMLNNPPEDAP 219

Query: 188 AKLELKPK-------------REFDEERAKEMEKFEISRSTS---GANRSNNNSSPESSY 247
            K  + PK             ++ DE+  K  +K E+  STS   G+N  + +   ES+ 
Sbjct: 220 RKPGIFPKTCRKKAVPFDAVTQDNDEDGKK--KKTELKNSTSEETGSNNMDQDGMLESTV 279

Query: 248 PKGLIVAFTLKSTSSGSSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTEQIEETNLSK 307
                +A    + S  +  +   S    A   E + +      K + EK+E  + ++ +K
Sbjct: 280 TSEPNLATLTSTVSKKAKKKRLRSQSFEASSGEDQFEMSSKMRKVEEEKSELKDLSSENK 339

Query: 308 DEEIK--ESADDKNGEAVEKNDSGNEKSLEVEEQ-------SMDDTIDEHEE-------- 367
           DEE+   +  DD   +A  K     ++ L+V E+       S  + +D  +E        
Sbjct: 340 DEELNSLKKKDDSVLKAKRKRKKKLKERLKVGEEVIPLRVLSKKEWLDLKQEYLTLQKRC 399

Query: 368 ----------AEEKPTAF----------------------------------QSRNNMNV 427
                       +KPT +                                  +   N  +
Sbjct: 400 MAHLKQSVFQINQKPTNYHIVKLKEDDTNAFYKDTPKKELTSGPEFLSGVIVKISYNQPL 459

Query: 428 VSREDLKAVFRKFGNVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIA 441
            S+  +K +  +   V ++D   GD  G++RF+  E AQK   +    +      K +  
Sbjct: 460 PSKRCIKDMLSELSPVAYVDLLDGDTEGHVRFKSSEDAQKVIKARFEFQ------KKYNW 519

[Close]

BLAST of Chy3G062120 vs. ExPASy Swiss-Prot
Match: P40796 (La protein homolog OS=Drosophila melanogaster OX=7227 GN=La PE=1 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 1.6e-08
Identity = 83/312 (26.60%), Postives = 140/312 (44.87%), Query Frame = 0


Query: 12  KKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKG-HLELKQDVTPEN 71
           + ++RQVE+YF D+NL RD FLR+ I ++ DG V LS++ TF R+     +L + V   N
Sbjct: 52  RAIIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALN 111

Query: 72  FPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKP---EELIEQLDDRTVAASPFEYD 131
             E+ +            +++SED   + R  E P P   EE  +++ +RT  A  F  D
Sbjct: 112 KSEEGL------------VEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLD 171

Query: 132 IKLEDVEAFFNQVTKVNSVRLPRHVADKRV----FCGTALIEFATEEDAEKVL-KESLVY 191
            ++ ++  F     KV ++ + +H  DK      F G+  + F T++ A+  L +E +VY
Sbjct: 172 SQISELLDFAANYDKVVNLTMRKHY-DKPTKSYKFKGSIFLTFETKDQAKAFLEQEKIVY 231

Query: 192 AGAKLELKPKREFDEERAKEMEKFEISRSTSGANRSNNNSSPESSYPKGLIVAFTLKSTS 251
              +L     R++  +  KE ++    ++    N+      P    PK  IV F   +  
Sbjct: 232 KEREL----LRKWQVDYLKEKQEEYAQKNEKRKNKKEAKPEPAFELPKNAIVVFE-GAPE 291

Query: 252 SGSSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTE-QIEETNLSKDEEIKESADDKNG 311
           + S  E  E+     D      +     +K     TE    E  ++K EE K    D+  
Sbjct: 292 TSSREEIREAFEKIKDFEVAYIEFAKGETKGSVRLTEADAAEKYIAKVEEGKLKFKDEVS 345

Query: 312 EAVEKNDSGNEK 314
            ++ K     EK
Sbjct: 352 LSLRKATEEEEK 345

[Close]

BLAST of Chy3G062120 vs. ExPASy TrEMBL
Match: A0A0A0LP79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375250 PE=4 SV=1)

HSP 1 Score: 859.0 bits (2218), Expect = 9.3e-246
Identity = 459/470 (97.66%), Postives = 466/470 (99.15%), Query Frame = 0


Query: 1   MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHL 60
           MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISES DG+VDLSLICTFSRMKGHL
Sbjct: 1   MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESPDGLVDLSLICTFSRMKGHL 60

Query: 61  ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120
           ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA
Sbjct: 61  ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120

Query: 121 ASPFEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESL 180
           ASPFEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEF+TEEDAEKVLKESL
Sbjct: 121 ASPFEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFSTEEDAEKVLKESL 180

Query: 181 VYAGAKLELKPKREFDEERAKEMEKFEISRSTSGANRSNNNSSPESSYPKGLIVAFTLKS 240
           VYAGAKLELKPKREFDEERAKEMEKFE SRSTSGANRSNNNSSPE+SYPKGLIVAFTLKS
Sbjct: 181 VYAGAKLELKPKREFDEERAKEMEKFESSRSTSGANRSNNNSSPEASYPKGLIVAFTLKS 240

Query: 241 TSSGSSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTEQIEETNLSKDEEIKESADDKN 300
           TSSGS+AEG+ESHGV ADKTECKTDEGLDSSKNDSEKT QIEETNLSKDEEIKESADDKN
Sbjct: 241 TSSGSTAEGNESHGV-ADKTECKTDEGLDSSKNDSEKTVQIEETNLSKDEEIKESADDKN 300

Query: 301 GEAVEKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRKF 360
           GEAVEKNDSGNEKSLEVEEQSMDDT+DEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRKF
Sbjct: 301 GEAVEKNDSGNEKSLEVEEQSMDDTVDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRKF 360

Query: 361 GNVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKEY 420
           G+VKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKEY
Sbjct: 361 GSVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKEY 420

Query: 421 WSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV 471
           WSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV
Sbjct: 421 WSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV 469

[Close]

BLAST of Chy3G062120 vs. ExPASy TrEMBL
Match: A0A5A7VFC4 (La protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003520 PE=4 SV=1)

HSP 1 Score: 819.7 bits (2116), Expect = 6.3e-234
Identity = 440/471 (93.42%), Postives = 456/471 (96.82%), Query Frame = 0


Query: 1   MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHL 60
           M NTSLDQE AKKVLRQVEFYFSDSNLPRD FLRK+ISES DGMVDLSLICTF+RMKGHL
Sbjct: 1   MENTSLDQEKAKKVLRQVEFYFSDSNLPRDGFLRKSISESPDGMVDLSLICTFTRMKGHL 60

Query: 61  ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120
           ELKQDVTPE+FPEDT+KAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA
Sbjct: 61  ELKQDVTPEDFPEDTLKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120

Query: 121 ASPFEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESL 180
           ASPFEYDIKLEDVEAFF++VTKVNSVRLPRHVADKRVFCGTALIEF+TEEDAEKVLKESL
Sbjct: 121 ASPFEYDIKLEDVEAFFDRVTKVNSVRLPRHVADKRVFCGTALIEFSTEEDAEKVLKESL 180

Query: 181 VYAGAKLELKPKREFDEERAKEMEKFEISRSTSGANRSNNNSSPESSYPKGLIVAFTLKS 240
           VYAGAKLELKPKREFDEERAKEMEKFE SRST GANRSNNNSSPESSYPKGLIVAFTLKS
Sbjct: 181 VYAGAKLELKPKREFDEERAKEMEKFESSRSTLGANRSNNNSSPESSYPKGLIVAFTLKS 240

Query: 241 TSSGSSAEGSESHGVAADKTECKTDEGL-DSSKNDSEKTEQIEETNLSKDEEIKESADDK 300
           TSSG+SAE +ESHGVAADKTECKTDEGL DSSKND EKTEQIEETNLSKDEEIK+SADDK
Sbjct: 241 TSSGNSAEENESHGVAADKTECKTDEGLEDSSKNDPEKTEQIEETNLSKDEEIKKSADDK 300

Query: 301 NGEAVEKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRK 360
           NGEA EKND+GNE+SLEVEEQ MD T+DE EEAEEKPTA +SRNNMNVVSREDLKAVF+K
Sbjct: 301 NGEAEEKNDTGNERSLEVEEQCMDGTVDEQEEAEEKPTALKSRNNMNVVSREDLKAVFQK 360

Query: 361 FGNVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKE 420
           FG+VKFIDFKIGDESGYIRFEEPEAAQKARASAVL EQGGLAVKNFIATLEPVSGEAEKE
Sbjct: 361 FGSVKFIDFKIGDESGYIRFEEPEAAQKARASAVLTEQGGLAVKNFIATLEPVSGEAEKE 420

Query: 421 YWSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV 471
           YWSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV
Sbjct: 421 YWSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV 471

[Close]

BLAST of Chy3G062120 vs. ExPASy TrEMBL
Match: A0A1S3BCL6 (la protein 1 OS=Cucumis melo OX=3656 GN=LOC103488199 PE=4 SV=1)

HSP 1 Score: 819.7 bits (2116), Expect = 6.3e-234
Identity = 440/471 (93.42%), Postives = 456/471 (96.82%), Query Frame = 0


Query: 1   MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHL 60
           M NTSLDQE AKKVLRQVEFYFSDSNLPRD FLRK+ISES DGMVDLSLICTF+RMKGHL
Sbjct: 1   MENTSLDQEKAKKVLRQVEFYFSDSNLPRDGFLRKSISESPDGMVDLSLICTFTRMKGHL 60

Query: 61  ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120
           ELKQDVTPE+FPEDT+KAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA
Sbjct: 61  ELKQDVTPEDFPEDTLKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120

Query: 121 ASPFEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESL 180
           ASPFEYDIKLEDVEAFF++VTKVNSVRLPRHVADKRVFCGTALIEF+TEEDAEKVLKESL
Sbjct: 121 ASPFEYDIKLEDVEAFFDRVTKVNSVRLPRHVADKRVFCGTALIEFSTEEDAEKVLKESL 180

Query: 181 VYAGAKLELKPKREFDEERAKEMEKFEISRSTSGANRSNNNSSPESSYPKGLIVAFTLKS 240
           VYAGAKLELKPKREFDEERAKEMEKFE SRST GANRSNNNSSPESSYPKGLIVAFTLKS
Sbjct: 181 VYAGAKLELKPKREFDEERAKEMEKFESSRSTLGANRSNNNSSPESSYPKGLIVAFTLKS 240

Query: 241 TSSGSSAEGSESHGVAADKTECKTDEGL-DSSKNDSEKTEQIEETNLSKDEEIKESADDK 300
           TSSG+SAE +ESHGVAADKTECKTDEGL DSSKND EKTEQIEETNLSKDEEIK+SADDK
Sbjct: 241 TSSGNSAEENESHGVAADKTECKTDEGLEDSSKNDPEKTEQIEETNLSKDEEIKKSADDK 300

Query: 301 NGEAVEKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRK 360
           NGEA EKND+GNE+SLEVEEQ MD T+DE EEAEEKPTA +SRNNMNVVSREDLKAVF+K
Sbjct: 301 NGEAEEKNDTGNERSLEVEEQCMDGTVDEQEEAEEKPTALKSRNNMNVVSREDLKAVFQK 360

Query: 361 FGNVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKE 420
           FG+VKFIDFKIGDESGYIRFEEPEAAQKARASAVL EQGGLAVKNFIATLEPVSGEAEKE
Sbjct: 361 FGSVKFIDFKIGDESGYIRFEEPEAAQKARASAVLTEQGGLAVKNFIATLEPVSGEAEKE 420

Query: 421 YWSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV 471
           YWSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV
Sbjct: 421 YWSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV 471

[Close]

BLAST of Chy3G062120 vs. ExPASy TrEMBL
Match: A0A6J1K750 (la protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111492255 PE=4 SV=1)

HSP 1 Score: 726.5 bits (1874), Expect = 7.2e-206
Identity = 393/472 (83.26%), Postives = 430/472 (91.10%), Query Frame = 0


Query: 1   MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHL 60
           M N+SLDQE AKKVLRQVEFYFSDSNLPRD FL+KTIS   DGMVDLSLICTFSRMKGHL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTISGIPDGMVDLSLICTFSRMKGHL 60

Query: 61  ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120
           +LKQDV PE  PEDT+KAVAETLR+SS++KVSEDGKK+GR TELPKPEELIEQLDD+T+A
Sbjct: 61  KLKQDVKPEEIPEDTLKAVAETLRSSSTIKVSEDGKKIGRTTELPKPEELIEQLDDKTIA 120

Query: 121 ASPFEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESL 180
           ASPFEYD+KLEDVEAFFNQ+ KVNSVRLPRHVADKRVFCGTAL+EF+ EEDAEKVLKESL
Sbjct: 121 ASPFEYDVKLEDVEAFFNQIAKVNSVRLPRHVADKRVFCGTALVEFSNEEDAEKVLKESL 180

Query: 181 VYAGAKLELKPKREFDEERAKEMEKFEISRSTSGANRSNNNSSPESSYPKGLIVAFTLKS 240
           +YAGAKLELKPKR+FD+ERAKE E+FE SR+ S ANR NNN  PES+YPKGLIVAFTLKS
Sbjct: 181 LYAGAKLELKPKRDFDKERAKETEEFESSRANSSANRKNNN-PPESNYPKGLIVAFTLKS 240

Query: 241 TSSGSSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTEQI-EETNLSKDEEIKESADDK 300
            SSGSSAE + SH VAADKTECKTDE LDSSKNDSEKT+QI EE N+SKDEEIK SADD 
Sbjct: 241 VSSGSSAEENGSHCVAADKTECKTDERLDSSKNDSEKTKQIWEEANMSKDEEIK-SADDN 300

Query: 301 NGEAVEKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRK 360
           NGEA +KND GNE+  EVEE++ +DT+DEHEE EEKPTA + +NNMNVVSREDLK +F+K
Sbjct: 301 NGEADKKNDLGNEEKPEVEERTTNDTVDEHEEDEEKPTAAKFKNNMNVVSREDLKVIFQK 360

Query: 361 FGNVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKE 420
           FG+VKFIDFKIGDESGYIRFEEPEAAQKARA+AVLAEQGGLAVK+FIATLEPVSGEAEKE
Sbjct: 361 FGSVKFIDFKIGDESGYIRFEEPEAAQKARAAAVLAEQGGLAVKSFIATLEPVSGEAEKE 420

Query: 421 YWSLLRSNQEKHHRDFKGNRGRGGKFNR-GGKHGRSRGHDNHRGRPNKAQKV 471
           YW LLRSNQEKHHRDFKGNRGRGGKFNR GGKH RSRGH N +GRPNKAQKV
Sbjct: 421 YWRLLRSNQEKHHRDFKGNRGRGGKFNRGGGKHARSRGHGNDQGRPNKAQKV 470

[Close]

BLAST of Chy3G062120 vs. ExPASy TrEMBL
Match: A0A6J1HHB2 (la protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111462923 PE=4 SV=1)

HSP 1 Score: 721.1 bits (1860), Expect = 3.0e-204
Identity = 394/476 (82.77%), Postives = 428/476 (89.92%), Query Frame = 0


Query: 1   MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHL 60
           M N+SLDQE AKKVLRQVEFYFSDSNLPRD FL+KTIS   DGMVDLSLICTFSRMKGHL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTISGIADGMVDLSLICTFSRMKGHL 60

Query: 61  ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120
           +LKQDV PE  PEDT+KAVAETLR+SS++KVSEDGKK+GR TELPKPEELIEQLDD+T+A
Sbjct: 61  KLKQDVKPEEIPEDTLKAVAETLRSSSTIKVSEDGKKIGRTTELPKPEELIEQLDDKTIA 120

Query: 121 ASPFEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESL 180
           ASPFEYD+KLEDVEAFFNQ+ KVNSVRLPRHVADKRVFCGTAL+EF+TEEDAEKVLKESL
Sbjct: 121 ASPFEYDVKLEDVEAFFNQIAKVNSVRLPRHVADKRVFCGTALVEFSTEEDAEKVLKESL 180

Query: 181 VYAGAKLELKPKREFDEERAKEMEKFEISRSTSGANRSNNNSSPESSYPKGLIVAFTLKS 240
           +YAGAKLELKPKR+FD ERAKE E+FE SR+ S ANR NNN  PES+YPKGLIVAFTLKS
Sbjct: 181 LYAGAKLELKPKRDFDAERAKETEEFESSRANSSANRKNNN-PPESNYPKGLIVAFTLKS 240

Query: 241 TSSGSSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTEQI-EETNLSKDEEIKESADDK 300
            SSGSSAE + SHGVAADKTECK DE LDSSKNDSEKTE I EE N+SKDEEIK SADD 
Sbjct: 241 VSSGSSAEENGSHGVAADKTECKPDERLDSSKNDSEKTEIIGEEANMSKDEEIK-SADDN 300

Query: 301 NGEAVEKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRK 360
           NGEA +KND GNE+  EVEE++ +DT+DEHEE EEKPTA +S+NNMNVVSREDLK +F+K
Sbjct: 301 NGEADKKNDLGNEERPEVEERTTNDTVDEHEEDEEKPTAAKSKNNMNVVSREDLKVIFQK 360

Query: 361 FGNVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKE 420
           FG+VKFIDFKIGDESGYIRFEEPEAAQKARA+AVLAEQGGL VK+FIATLEPVSGEAEKE
Sbjct: 361 FGSVKFIDFKIGDESGYIRFEEPEAAQKARAAAVLAEQGGLVVKSFIATLEPVSGEAEKE 420

Query: 421 YWSLLRSNQEKHHRDFKGNRGRGGKFNR-GGKHGRSRGH----DNHRGRPNKAQKV 471
           YW LLRSNQEKHHRDFK NRGRGGKFNR GGKH RSRGH     N RGRPNKAQKV
Sbjct: 421 YWRLLRSNQEKHHRDFKSNRGRGGKFNRGGGKHARSRGHGHCNGNDRGRPNKAQKV 474

[Close]

BLAST of Chy3G062120 vs. NCBI nr
Match: XP_004150280.1 (la protein 1 [Cucumis sativus] >KGN62834.1 hypothetical protein Csa_022558 [Cucumis sativus])

HSP 1 Score: 856 bits (2212), Expect = 5.42e-312
Identity = 459/470 (97.66%), Postives = 466/470 (99.15%), Query Frame = 0


Query: 1   MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHL 60
           MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISES DG+VDLSLICTFSRMKGHL
Sbjct: 1   MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESPDGLVDLSLICTFSRMKGHL 60

Query: 61  ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120
           ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA
Sbjct: 61  ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120

Query: 121 ASPFEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESL 180
           ASPFEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEF+TEEDAEKVLKESL
Sbjct: 121 ASPFEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFSTEEDAEKVLKESL 180

Query: 181 VYAGAKLELKPKREFDEERAKEMEKFEISRSTSGANRSNNNSSPESSYPKGLIVAFTLKS 240
           VYAGAKLELKPKREFDEERAKEMEKFE SRSTSGANRSNNNSSPE+SYPKGLIVAFTLKS
Sbjct: 181 VYAGAKLELKPKREFDEERAKEMEKFESSRSTSGANRSNNNSSPEASYPKGLIVAFTLKS 240

Query: 241 TSSGSSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTEQIEETNLSKDEEIKESADDKN 300
           TSSGS+AEG+ESHGVA DKTECKTDEGLDSSKNDSEKT QIEETNLSKDEEIKESADDKN
Sbjct: 241 TSSGSTAEGNESHGVA-DKTECKTDEGLDSSKNDSEKTVQIEETNLSKDEEIKESADDKN 300

Query: 301 GEAVEKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRKF 360
           GEAVEKNDSGNEKSLEVEEQSMDDT+DEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRKF
Sbjct: 301 GEAVEKNDSGNEKSLEVEEQSMDDTVDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRKF 360

Query: 361 GNVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKEY 420
           G+VKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKEY
Sbjct: 361 GSVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKEY 420

Query: 421 WSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV 470
           WSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV
Sbjct: 421 WSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV 469

[Close]

BLAST of Chy3G062120 vs. NCBI nr
Match: XP_008445036.1 (PREDICTED: la protein 1 [Cucumis melo] >KAA0065026.1 la protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 817 bits (2111), Expect = 1.42e-296
Identity = 440/471 (93.42%), Postives = 456/471 (96.82%), Query Frame = 0


Query: 1   MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHL 60
           M NTSLDQE AKKVLRQVEFYFSDSNLPRD FLRK+ISES DGMVDLSLICTF+RMKGHL
Sbjct: 1   MENTSLDQEKAKKVLRQVEFYFSDSNLPRDGFLRKSISESPDGMVDLSLICTFTRMKGHL 60

Query: 61  ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120
           ELKQDVTPE+FPEDT+KAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA
Sbjct: 61  ELKQDVTPEDFPEDTLKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120

Query: 121 ASPFEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESL 180
           ASPFEYDIKLEDVEAFF++VTKVNSVRLPRHVADKRVFCGTALIEF+TEEDAEKVLKESL
Sbjct: 121 ASPFEYDIKLEDVEAFFDRVTKVNSVRLPRHVADKRVFCGTALIEFSTEEDAEKVLKESL 180

Query: 181 VYAGAKLELKPKREFDEERAKEMEKFEISRSTSGANRSNNNSSPESSYPKGLIVAFTLKS 240
           VYAGAKLELKPKREFDEERAKEMEKFE SRST GANRSNNNSSPESSYPKGLIVAFTLKS
Sbjct: 181 VYAGAKLELKPKREFDEERAKEMEKFESSRSTLGANRSNNNSSPESSYPKGLIVAFTLKS 240

Query: 241 TSSGSSAEGSESHGVAADKTECKTDEGL-DSSKNDSEKTEQIEETNLSKDEEIKESADDK 300
           TSSG+SAE +ESHGVAADKTECKTDEGL DSSKND EKTEQIEETNLSKDEEIK+SADDK
Sbjct: 241 TSSGNSAEENESHGVAADKTECKTDEGLEDSSKNDPEKTEQIEETNLSKDEEIKKSADDK 300

Query: 301 NGEAVEKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRK 360
           NGEA EKND+GNE+SLEVEEQ MD T+DE EEAEEKPTA +SRNNMNVVSREDLKAVF+K
Sbjct: 301 NGEAEEKNDTGNERSLEVEEQCMDGTVDEQEEAEEKPTALKSRNNMNVVSREDLKAVFQK 360

Query: 361 FGNVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKE 420
           FG+VKFIDFKIGDESGYIRFEEPEAAQKARASAVL EQGGLAVKNFIATLEPVSGEAEKE
Sbjct: 361 FGSVKFIDFKIGDESGYIRFEEPEAAQKARASAVLTEQGGLAVKNFIATLEPVSGEAEKE 420

Query: 421 YWSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV 470
           YWSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV
Sbjct: 421 YWSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV 471

[Close]

BLAST of Chy3G062120 vs. NCBI nr
Match: XP_022997306.1 (la protein 1 [Cucurbita maxima])

HSP 1 Score: 724 bits (1869), Expect = 9.66e-260
Identity = 393/472 (83.26%), Postives = 430/472 (91.10%), Query Frame = 0


Query: 1   MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHL 60
           M N+SLDQE AKKVLRQVEFYFSDSNLPRD FL+KTIS   DGMVDLSLICTFSRMKGHL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTISGIPDGMVDLSLICTFSRMKGHL 60

Query: 61  ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120
           +LKQDV PE  PEDT+KAVAETLR+SS++KVSEDGKK+GR TELPKPEELIEQLDD+T+A
Sbjct: 61  KLKQDVKPEEIPEDTLKAVAETLRSSSTIKVSEDGKKIGRTTELPKPEELIEQLDDKTIA 120

Query: 121 ASPFEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESL 180
           ASPFEYD+KLEDVEAFFNQ+ KVNSVRLPRHVADKRVFCGTAL+EF+ EEDAEKVLKESL
Sbjct: 121 ASPFEYDVKLEDVEAFFNQIAKVNSVRLPRHVADKRVFCGTALVEFSNEEDAEKVLKESL 180

Query: 181 VYAGAKLELKPKREFDEERAKEMEKFEISRSTSGANRSNNNSSPESSYPKGLIVAFTLKS 240
           +YAGAKLELKPKR+FD+ERAKE E+FE SR+ S ANR NNN  PES+YPKGLIVAFTLKS
Sbjct: 181 LYAGAKLELKPKRDFDKERAKETEEFESSRANSSANRKNNNP-PESNYPKGLIVAFTLKS 240

Query: 241 TSSGSSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTEQI-EETNLSKDEEIKESADDK 300
            SSGSSAE + SH VAADKTECKTDE LDSSKNDSEKT+QI EE N+SKDEEIK SADD 
Sbjct: 241 VSSGSSAEENGSHCVAADKTECKTDERLDSSKNDSEKTKQIWEEANMSKDEEIK-SADDN 300

Query: 301 NGEAVEKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRK 360
           NGEA +KND GNE+  EVEE++ +DT+DEHEE EEKPTA + +NNMNVVSREDLK +F+K
Sbjct: 301 NGEADKKNDLGNEEKPEVEERTTNDTVDEHEEDEEKPTAAKFKNNMNVVSREDLKVIFQK 360

Query: 361 FGNVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKE 420
           FG+VKFIDFKIGDESGYIRFEEPEAAQKARA+AVLAEQGGLAVK+FIATLEPVSGEAEKE
Sbjct: 361 FGSVKFIDFKIGDESGYIRFEEPEAAQKARAAAVLAEQGGLAVKSFIATLEPVSGEAEKE 420

Query: 421 YWSLLRSNQEKHHRDFKGNRGRGGKFNRGG-KHGRSRGHDNHRGRPNKAQKV 470
           YW LLRSNQEKHHRDFKGNRGRGGKFNRGG KH RSRGH N +GRPNKAQKV
Sbjct: 421 YWRLLRSNQEKHHRDFKGNRGRGGKFNRGGGKHARSRGHGNDQGRPNKAQKV 470

[Close]

BLAST of Chy3G062120 vs. NCBI nr
Match: KAG7029726.1 (La protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 719 bits (1855), Expect = 1.41e-257
Identity = 393/474 (82.91%), Postives = 428/474 (90.30%), Query Frame = 0


Query: 1   MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHL 60
           M N+SLDQE AKKVLRQVEFYFSDSNLPRD FL+KTIS   DGMVDLSLICTFSRMKGHL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTISGIADGMVDLSLICTFSRMKGHL 60

Query: 61  ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120
           +LKQDV PE  PEDT+KAVAETLR+SS++KVSEDGKK+GR TELPKPEELIEQLDD+T+A
Sbjct: 61  KLKQDVKPEEIPEDTLKAVAETLRSSSTIKVSEDGKKIGRTTELPKPEELIEQLDDKTIA 120

Query: 121 ASPFEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESL 180
           ASPFEYDIKLEDVEAFFN++ KVNSVRLPRHVADKRVFCGTAL+EF+TEEDAEKVLKESL
Sbjct: 121 ASPFEYDIKLEDVEAFFNEIAKVNSVRLPRHVADKRVFCGTALVEFSTEEDAEKVLKESL 180

Query: 181 VYAGAKLELKPKREFDEERAKEMEKFEISRSTSGANRSNNNSSPESSYPKGLIVAFTLKS 240
           +YAGAKLELKPKR+FD ERAKE E+FE SR+ S ANR NNN  PES+YPKGLIVAFTLKS
Sbjct: 181 LYAGAKLELKPKRDFDAERAKETEEFESSRANSSANRKNNNP-PESNYPKGLIVAFTLKS 240

Query: 241 TSSGSSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTEQI-EETNLSKDEEIKESADDK 300
            SSGSSAE + SHGVAADKTECK DE LDSSKNDSEKTEQI EE N+SKDEEI  SADD 
Sbjct: 241 VSSGSSAEENGSHGVAADKTECKPDERLDSSKNDSEKTEQIGEEANMSKDEEIN-SADDN 300

Query: 301 NGEAVEKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRK 360
           NGEA +KND GNE+  EVEE++ +DT+DEHEE EEKPTA +S+NNMNVVSREDLK +F+K
Sbjct: 301 NGEADKKNDLGNEERPEVEERTTNDTVDEHEEDEEKPTAAKSKNNMNVVSREDLKVIFQK 360

Query: 361 FGNVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKE 420
           +G+VKFIDFKIGDESGYIRFEEPEAAQKARA+AVLAEQGGL VK+FIATLEPVSGEAEKE
Sbjct: 361 YGSVKFIDFKIGDESGYIRFEEPEAAQKARAAAVLAEQGGLVVKSFIATLEPVSGEAEKE 420

Query: 421 YWSLLRSNQEKHHRDFKGNRGRGGKFNRGG-KHGRSRGHDN--HRGRPNKAQKV 470
           YW LLRSNQEKHHRDFK NRGRGGKFNRGG KH RSRGH N   RGRPNKAQKV
Sbjct: 421 YWRLLRSNQEKHHRDFKSNRGRGGKFNRGGGKHARSRGHGNGNDRGRPNKAQKV 472

[Close]

BLAST of Chy3G062120 vs. NCBI nr
Match: XP_022962519.1 (la protein 1 [Cucurbita moschata])

HSP 1 Score: 719 bits (1855), Expect = 1.51e-257
Identity = 394/476 (82.77%), Postives = 428/476 (89.92%), Query Frame = 0


Query: 1   MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHL 60
           M N+SLDQE AKKVLRQVEFYFSDSNLPRD FL+KTIS   DGMVDLSLICTFSRMKGHL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTISGIADGMVDLSLICTFSRMKGHL 60

Query: 61  ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120
           +LKQDV PE  PEDT+KAVAETLR+SS++KVSEDGKK+GR TELPKPEELIEQLDD+T+A
Sbjct: 61  KLKQDVKPEEIPEDTLKAVAETLRSSSTIKVSEDGKKIGRTTELPKPEELIEQLDDKTIA 120

Query: 121 ASPFEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESL 180
           ASPFEYD+KLEDVEAFFNQ+ KVNSVRLPRHVADKRVFCGTAL+EF+TEEDAEKVLKESL
Sbjct: 121 ASPFEYDVKLEDVEAFFNQIAKVNSVRLPRHVADKRVFCGTALVEFSTEEDAEKVLKESL 180

Query: 181 VYAGAKLELKPKREFDEERAKEMEKFEISRSTSGANRSNNNSSPESSYPKGLIVAFTLKS 240
           +YAGAKLELKPKR+FD ERAKE E+FE SR+ S ANR NNN  PES+YPKGLIVAFTLKS
Sbjct: 181 LYAGAKLELKPKRDFDAERAKETEEFESSRANSSANRKNNNP-PESNYPKGLIVAFTLKS 240

Query: 241 TSSGSSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTEQI-EETNLSKDEEIKESADDK 300
            SSGSSAE + SHGVAADKTECK DE LDSSKNDSEKTE I EE N+SKDEEIK SADD 
Sbjct: 241 VSSGSSAEENGSHGVAADKTECKPDERLDSSKNDSEKTEIIGEEANMSKDEEIK-SADDN 300

Query: 301 NGEAVEKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRK 360
           NGEA +KND GNE+  EVEE++ +DT+DEHEE EEKPTA +S+NNMNVVSREDLK +F+K
Sbjct: 301 NGEADKKNDLGNEERPEVEERTTNDTVDEHEEDEEKPTAAKSKNNMNVVSREDLKVIFQK 360

Query: 361 FGNVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKE 420
           FG+VKFIDFKIGDESGYIRFEEPEAAQKARA+AVLAEQGGL VK+FIATLEPVSGEAEKE
Sbjct: 361 FGSVKFIDFKIGDESGYIRFEEPEAAQKARAAAVLAEQGGLVVKSFIATLEPVSGEAEKE 420

Query: 421 YWSLLRSNQEKHHRDFKGNRGRGGKFNRGG-KHGRSRGHD----NHRGRPNKAQKV 470
           YW LLRSNQEKHHRDFK NRGRGGKFNRGG KH RSRGH     N RGRPNKAQKV
Sbjct: 421 YWRLLRSNQEKHHRDFKSNRGRGGKFNRGGGKHARSRGHGHCNGNDRGRPNKAQKV 474

[Close]

BLAST of Chy3G062120 vs. TAIR 10
Match: AT4G32720.1 (La protein 1 )

HSP 1 Score: 425.2 bits (1092), Expect = 6.6e-119
Identity = 255/471 (54.14%), Postives = 327/471 (69.43%), Query Frame = 0


Query: 6   LDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHLELKQD 65
           L +E AK VLRQVEFYFSDSNLP D FL+KT++ES DG+V L+LIC+FS+M+G+L+L  D
Sbjct: 6   LTEETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKL-GD 65

Query: 66  VTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVAASPFE 125
              ++ PEDT+KAVA+TLRTSS+LK+S+DGKKVGR+TEL K E+LIEQL+ RTVAASPF 
Sbjct: 66  SKGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAASPFS 125

Query: 126 YDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESLVYAGA 185
           YD+K EDVE+FF+Q  KVNSVR+PRHVA+ R+F G AL+EF TEEDA+ V+K++LV+AG 
Sbjct: 126 YDVKREDVESFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQNLVFAGQ 185

Query: 186 KLELKPKREFDEERAKEMEKFEISRSTSG-ANRSN-----NNSSPESSYPKGLIVAFTLK 245
           +LELKPK+EFD ER K+  KF   +   G AN+ N     NNS+ E  YPKGLI++FTLK
Sbjct: 186 ELELKPKKEFDNEREKDEVKFANYQPQKGSANQKNGSDHKNNSAYEPDYPKGLIISFTLK 245

Query: 246 STSSGSSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTEQIEETNLSKDEEIKESADDK 305
            ++                      +EG    K+  E T++  E + +K  +  ++  + 
Sbjct: 246 RSA----------------------EEGTTEQKSSEEPTDKTMEESETKPADTPDADKEN 305

Query: 306 NGEAVEKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRK 365
            GE                    +   DE +E EEK      ++N +VV REDLKAVF K
Sbjct: 306 TGEV-----------------QAEGAEDEDDEKEEKGALATHKDNKDVVLREDLKAVFGK 365

Query: 366 FGNVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKE 425
           FG+VKF+DFK+G E+GY+RF+EPEA+QKARA+AVLA +GGLAVKNFIA LEPV GEAEKE
Sbjct: 366 FGDVKFVDFKMGSETGYLRFDEPEASQKARAAAVLANEGGLAVKNFIAVLEPVIGEAEKE 425

Query: 426 YWSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGRSRGHDNHRGRPNKAQKV 471
           YW+LLRS   K   D  G  GRGG+  RGG+ GR RG D+  GR NK+QKV
Sbjct: 426 YWTLLRS---KDRFDKGGRGGRGGR--RGGRFGRKRGSDSPGGRWNKSQKV 431

[Close]

BLAST of Chy3G062120 vs. TAIR 10
Match: AT4G32720.2 (La protein 1 )

HSP 1 Score: 404.8 bits (1039), Expect = 9.3e-113
Identity = 238/454 (52.42%), Postives = 310/454 (68.28%), Query Frame = 0


Query: 6   LDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHLELKQD 65
           L +E AK VLRQVEFYFSDSNLP D FL+KT++ES DG+V L+LIC+FS+M+G+L+L  D
Sbjct: 6   LTEETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKL-GD 65

Query: 66  VTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVAASPFE 125
              ++ PEDT+KAVA+TLRTSS+LK+S+DGKKVGR+TEL K E+LIEQL+ RTVAASPF 
Sbjct: 66  SKGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAASPFS 125

Query: 126 YDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESLVYAGA 185
           YD+K EDVE+FF+Q  KVNSVR+PRHVA+ R+F G AL+EF TEEDA+ V+K++LV+AG 
Sbjct: 126 YDVKREDVESFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQNLVFAGQ 185

Query: 186 KLELKPKREFDEERAKEMEKFEISRSTSG-ANRSN-----NNSSPESSYPKGLIVAFTLK 245
           +LELKPK+EFD ER K+  KF   +   G AN+ N     NNS+ E  YPKGLI++FTLK
Sbjct: 186 ELELKPKKEFDNEREKDEVKFANYQPQKGSANQKNGSDHKNNSAYEPDYPKGLIISFTLK 245

Query: 246 STSSGSSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTEQIEETNLSKDEEIKESADDK 305
            ++                      +EG    K+  E T++  E + +K  +  ++  + 
Sbjct: 246 RSA----------------------EEGTTEQKSSEEPTDKTMEESETKPADTPDADKEN 305

Query: 306 NGEAVEKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRK 365
            GE                    +   DE +E EEK      ++N +VV REDLKAVF K
Sbjct: 306 TGEV-----------------QAEGAEDEDDEKEEKGALATHKDNKDVVLREDLKAVFGK 365

Query: 366 FGNVKFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVKNFIATLEPVSGEAEKE 425
           FG+VKF+DFK+G E+GY+RF+EPEA+QKARA+AVLA +GGLAVKNFIA LEPV GEAEKE
Sbjct: 366 FGDVKFVDFKMGSETGYLRFDEPEASQKARAAAVLANEGGLAVKNFIAVLEPVIGEAEKE 404

Query: 426 YWSLLRSNQEKHHRDFKGNRGRGGKFNRGGKHGR 454
           YW+LLRS                 +F++GG+ GR
Sbjct: 426 YWTLLRSKD---------------RFDKGGRGGR 404

[Close]

BLAST of Chy3G062120 vs. TAIR 10
Match: AT1G79880.1 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 263.5 bits (672), Expect = 3.3e-70
Identity = 176/439 (40.09%), Postives = 256/439 (58.31%), Query Frame = 0


Query: 4   TSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESHDGMVDLSLICTFSRMKGHLELK 63
           +S ++E AKK+L QVEFYFSDSNLP D FL + +++S DG+V L L+C+FSRM+  L L 
Sbjct: 3   SSFNEETAKKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNLLGL- 62

Query: 64  QDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVAASP 123
            ++  E+ P   ++ VA  LRTS  LKVS +G+++GR T+L KPEE++EQ+  RT+AASP
Sbjct: 63  GNINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASP 122

Query: 124 FEYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESLVYA 183
           FEY IK+EDV +FF+Q  KVNSVRLP ++ADKR FCGTAL+EF++E+D + +L++SLVYA
Sbjct: 123 FEYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSLVYA 182

Query: 184 GAKLELKPKREFDEERAKEMEKFEISRSTSGANRSNNNSSPESSYPKGLIVAFTLKSTSS 243
           GA L L PK +FD +R   +++        G + S+N       + +G IV F LK  +S
Sbjct: 183 GADLVLIPKSDFDCQRENMIKQL-------GKSESHN------EFRRGQIVKFALKWIAS 242

Query: 244 GSSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTEQIEETNLSKDEEIKESADDKNGEA 303
                                           EK    E+ +  K+ +IKE  D + G A
Sbjct: 243 -------------------------------EEKVTNKEKPSALKN-KIKEKEDKETGIA 302

Query: 304 VEKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRKFGNV 363
             + ++G+     + + + D  +                NN N VS E LK +F++FG+V
Sbjct: 303 DREKENGDNSCASLCKDNTDQLV------------VPPWNNSNSVSSEVLKDLFQRFGSV 362

Query: 364 KFIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVK-NFIATLEPVSGEAEKEYWS 423
           + I++  G +SGY+ F + E A KARA+      GGL VK NF   LE ++GE E+E W 
Sbjct: 363 EHIEYSGGLDSGYVWFTDSETAMKARAAVEFV--GGLVVKNNFSVALEAINGEMERELWK 381

Query: 424 LLRSNQ----EKHHRDFKG 438
            L S +    ++ H+  KG
Sbjct: 423 RLSSAELEGGKEGHKKEKG 381

[Close]

BLAST of Chy3G062120 vs. TAIR 10
Match: AT1G79880.3 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 200.3 bits (508), Expect = 3.5e-51
Identity = 142/375 (37.87%), Postives = 208/375 (55.47%), Query Frame = 0


Query: 65  DVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVAASPF 124
           ++  E+ P   ++ VA  LRTS  LKVS +G+++GR T+L KPEE++EQ+  RT+AASPF
Sbjct: 9   NINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASPF 68

Query: 125 EYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESLVYAG 184
           EY IK+EDV +FF+Q  KVNSVRLP ++ADKR FCGTAL+EF++E+D + +L++SLVYAG
Sbjct: 69  EYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSLVYAG 128

Query: 185 AKLELKPKREFDEERAKEMEKFEISRSTSGANRSNNNSSPESSYPKGLIVAFTLKSTSSG 244
           A L L PK +FD +R   +++        G + S+N       + +G IV F LK  +S 
Sbjct: 129 ADLVLIPKSDFDCQRENMIKQL-------GKSESHN------EFRRGQIVKFALKWIAS- 188

Query: 245 SSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTEQIEETNLSKDEEIKESADDKNGEAV 304
                                          EK    E+ +  K+ +IKE  D + G A 
Sbjct: 189 ------------------------------EEKVTNKEKPSALKN-KIKEKEDKETGIAD 248

Query: 305 EKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRKFGNVK 364
            + ++G+     + + + D  +                NN N VS E LK +F++FG+V+
Sbjct: 249 REKENGDNSCASLCKDNTDQLV------------VPPWNNSNSVSSEVLKDLFQRFGSVE 308

Query: 365 FIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVK-NFIATLEPVSGEAEKEYWSL 424
            I++  G +SGY+ F + E A KARA+      GGL VK NF   LE ++GE E+E W  
Sbjct: 309 HIEYSGGLDSGYVWFTDSETAMKARAAVEFV--GGLVVKNNFSVALEAINGEMERELWKR 324

Query: 425 LRSNQEKHHRDFKGN 439
           L S + +   D K N
Sbjct: 369 LSSAELEGGYDIKPN 324

[Close]

BLAST of Chy3G062120 vs. TAIR 10
Match: AT1G79880.2 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 198.4 bits (503), Expect = 1.3e-50
Identity = 142/378 (37.57%), Postives = 210/378 (55.56%), Query Frame = 0


Query: 65  DVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVAASPF 124
           ++  E+ P   ++ VA  LRTS  LKVS +G+++GR T+L KPEE++EQ+  RT+AASPF
Sbjct: 9   NINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASPF 68

Query: 125 EYDIKLEDVEAFFNQVTKVNSVRLPRHVADKRVFCGTALIEFATEEDAEKVLKESLVYAG 184
           EY IK+EDV +FF+Q  KVNSVRLP ++ADKR FCGTAL+EF++E+D + +L++SLVYAG
Sbjct: 69  EYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSLVYAG 128

Query: 185 AKLELKPKREFDEERAKEMEKFEISRSTSGANRSNNNSSPESSYPKGLIVAFTLKSTSSG 244
           A L L PK +FD +R   +++        G + S+N       + +G IV F LK  +S 
Sbjct: 129 ADLVLIPKSDFDCQRENMIKQL-------GKSESHN------EFRRGQIVKFALKWIAS- 188

Query: 245 SSAEGSESHGVAADKTECKTDEGLDSSKNDSEKTEQIEETNLSKDEEIKESADDKNGEAV 304
                                          EK    E+ +  K+ +IKE  D + G A 
Sbjct: 189 ------------------------------EEKVTNKEKPSALKN-KIKEKEDKETGIAD 248

Query: 305 EKNDSGNEKSLEVEEQSMDDTIDEHEEAEEKPTAFQSRNNMNVVSREDLKAVFRKFGNVK 364
            + ++G+     + + + D  +                NN N VS E LK +F++FG+V+
Sbjct: 249 REKENGDNSCASLCKDNTDQLV------------VPPWNNSNSVSSEVLKDLFQRFGSVE 308

Query: 365 FIDFKIGDESGYIRFEEPEAAQKARASAVLAEQGGLAVK-NFIATLEPVSGEAEKEYWSL 424
            I++  G +SGY+ F + E A KARA+      GGL VK NF   LE ++GE E+E W  
Sbjct: 309 HIEYSGGLDSGYVWFTDSETAMKARAAVEFV--GGLVVKNNFSVALEAINGEMERELWKR 327

Query: 425 LRSNQ----EKHHRDFKG 438
           L S +    ++ H+  KG
Sbjct: 369 LSSAELEGGKEGHKKEKG 327

The following BLAST results are available for this feature:

BLAST of Chy3G062120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZV7	9.3e-118	54.14	La protein 1 OS=Arabidopsis thaliana OX=3702 GN=LA1 PE=1 SV=1	[more]
Q0V7U7	4.7e-69	40.09	La protein 2 OS=Arabidopsis thaliana OX=3702 GN=LA2 PE=1 SV=1	[more]
P33399	2.0e-19	34.06	La protein homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=5...	[more]
Q7ZWE3	4.9e-10	23.54	La-related protein 7 OS=Danio rerio OX=7955 GN=larp7 PE=2 SV=1	[more]
P40796	1.6e-08	26.60	La protein homolog OS=Drosophila melanogaster OX=7227 GN=La PE=1 SV=2	[more]

BLAST of Chy3G062120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LP79	9.3e-246	97.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375250 PE=4 SV=1	[more]
A0A5A7VFC4	6.3e-234	93.42	La protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003520 P...	[more]
A0A1S3BCL6	6.3e-234	93.42	la protein 1 OS=Cucumis melo OX=3656 GN=LOC103488199 PE=4 SV=1	[more]
A0A6J1K750	7.2e-206	83.26	la protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111492255 PE=4 SV=1	[more]
A0A6J1HHB2	3.0e-204	82.77	la protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111462923 PE=4 SV=1	[more]

BLAST of Chy3G062120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150280.1	5.42e-312	97.66	la protein 1 [Cucumis sativus] >KGN62834.1 hypothetical protein Csa_022558 [Cucu...	[more]
XP_008445036.1	1.42e-296	93.42	PREDICTED: la protein 1 [Cucumis melo] >KAA0065026.1 la protein 1 [Cucumis melo ...	[more]
XP_022997306.1	9.66e-260	83.26	la protein 1 [Cucurbita maxima]	[more]
KAG7029726.1	1.41e-257	82.91	La protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022962519.1	1.51e-257	82.77	la protein 1 [Cucurbita moschata]	[more]

BLAST of Chy3G062120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32720.1	6.6e-119	54.14	La protein 1	[more]
AT4G32720.2	9.3e-113	52.42	La protein 1	[more]
AT1G79880.1	3.3e-70	40.09	RNA recognition motif (RRM)-containing protein	[more]
AT1G79880.3	3.5e-51	37.87	RNA recognition motif (RRM)-containing protein	[more]
AT1G79880.2	1.3e-50	37.57	RNA recognition motif (RRM)-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 315..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..320
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 427..441
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 427..470
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 443..460
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..228
None	No IPR available	PANTHER	PTHR22792:SF138	BNAANNG34180D PROTEIN	coord: 2..470
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 2..470
None	No IPR available	CDD	cd08030	LA_like_plant	coord: 11..100 e-value: 1.50687E-42 score: 143.684
None	No IPR available	CDD	cd12291	RRM1_La	coord: 118..190 e-value: 2.02678E-13 score: 63.3734
None	No IPR available	CDD	cd12292	RRM2_La_like	coord: 348..410 e-value: 4.24768E-20 score: 82.3523
IPR002344	Lupus La protein	PRINTS	PR00302	LUPUSLA	coord: 158..176 score: 35.41 coord: 43..58 score: 35.23 coord: 17..34 score: 67.68
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 337..410 e-value: 0.82 score: 7.3 coord: 118..190 e-value: 0.003 score: 26.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 125..177 e-value: 2.3E-6 score: 27.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 117..202 score: 9.882637
IPR006630	La-type HTH domain	SMART	SM00715	la	coord: 8..101 e-value: 7.7E-28 score: 108.5
IPR006630	La-type HTH domain	PFAM	PF05383	La	coord: 14..84 e-value: 1.2E-21 score: 76.5
IPR006630	La-type HTH domain	PROSITE	PS50961	HTH_LA	coord: 4..108 score: 24.195663
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 323..439 e-value: 6.9E-24 score: 85.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 110..208 e-value: 5.8E-14 score: 54.0
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 2..105 e-value: 7.6E-28 score: 98.3
IPR014886	La protein, xRRM domain	PFAM	PF08777	RRM_3	coord: 348..437 e-value: 2.7E-21 score: 75.5
IPR014886	La protein, xRRM domain	PROSITE	PS51939	XRRM	coord: 332..453 score: 21.812372
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 7..107
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 116..390

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G062120.1	Chy3G062120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008033	tRNA processing
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding