Chy3G061360 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G061360
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	V-type proton ATPase subunit c''1
Location	chrH03: 14787207 .. 14788271 (-)
RNA-Seq Expression	Chy3G061360
Synteny	Chy3G061360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACCGCCGCTGTCCTTGCGCGTTCTAGCTCCTGGGCTCGGGCTCTCATCAACATCTCTCCCTACACTTTCTCCGCCATCGGAATCGCCATCGCCATCGGCGTTTCCGTCCTCGGCGCCGCCTGGTATTCCATTACGTACACTTTGTATTTCTTTTTACGAATGTTTATTTTTTCGATTTTGTTTCCGAGTGATGAGAATTTGCGTTTTTTTTCTTTCGAATTTGGTAGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCGGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGGTGAAGCCCTGACTCTATTTGATGAATTGTTCATTTTGCTTTTGGTTGGATTCTTACTTCTATGGTAGGGTCCGGATATGTAATTAGGGATTATGCAATGTTTAATTCTTGGACTGATACAACTGAGAACGAAGAAAATCGTTAAAATTTCTTATCAGTTAGAACAGAATTGAGCGTGTGTCCAGTGTTTCTGAAAGAATATTGTTGAATGTAATATTGTACATTCCTTATTCTTGTTTCTGTCGCGATTAATTTGACTATAACAACTTGAATGTTGTGTTCTTTCAGTGTAATTTTCTGTGAAGCTGTTGCTATATACGGTGTCATTGTTGCCATTATCTTACAGACCAAGTTAGAGAGTGTGTCAGCATCTCAGATATATGCTCCCGAGTCTCTAAGAGCAGGATACGCAATTTTTGCTTCTGGAATCATAGTTGGCTTTGCAAACCTTGTCTGCGGGTTTGTTGCCTTTTCTCTTACTTTATTTTTTCAATCGAAATCCTTGAACTTCGTTCTTTTAAAGTTCGTTTACTTTTTAGTTTGATGGTTTATTCTGAATCTTTTCCGATGCTTTGTTTCAAGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAGAACTCCTCCCTTTTTGTGAAGATTCTTGTAATCGAGATCTTCGGCAGTGCACTTGGGTTGTTCGGAGTAATTGTTGGGATAATTATGTCAGCTCAAGCCTCTTGGCCTGCAAAGAGAGGTTAA

mRNA sequence

ATGTCAACCGCCGCTGTCCTTGCGCGTTCTAGCTCCTGGGCTCGGGCTCTCATCAACATCTCTCCCTACACTTTCTCCGCCATCGGAATCGCCATCGCCATCGGCGTTTCCGTCCTCGGCGCCGCCTGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCGGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGTGTAATTTTCTGTGAAGCTGTTGCTATATACGGTGTCATTGTTGCCATTATCTTACAGACCAAGTTAGAGAGTGTGTCAGCATCTCAGATATATGCTCCCGAGTCTCTAAGAGCAGGATACGCAATTTTTGCTTCTGGAATCATAGTTGGCTTTGCAAACCTTGTCTGCGGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAGAACTCCTCCCTTTTTGTGAAGATTCTTGTAATCGAGATCTTCGGCAGTGCACTTGGGTTGTTCGGAGTAATTGTTGGGATAATTATGTCAGCTCAAGCCTCTTGGCCTGCAAAGAGAGGTTAA

Coding sequence (CDS)

ATGTCAACCGCCGCTGTCCTTGCGCGTTCTAGCTCCTGGGCTCGGGCTCTCATCAACATCTCTCCCTACACTTTCTCCGCCATCGGAATCGCCATCGCCATCGGCGTTTCCGTCCTCGGCGCCGCCTGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCGGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGTGTAATTTTCTGTGAAGCTGTTGCTATATACGGTGTCATTGTTGCCATTATCTTACAGACCAAGTTAGAGAGTGTGTCAGCATCTCAGATATATGCTCCCGAGTCTCTAAGAGCAGGATACGCAATTTTTGCTTCTGGAATCATAGTTGGCTTTGCAAACCTTGTCTGCGGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAGAACTCCTCCCTTTTTGTGAAGATTCTTGTAATCGAGATCTTCGGCAGTGCACTTGGGTTGTTCGGAGTAATTGTTGGGATAATTATGTCAGCTCAAGCCTCTTGGCCTGCAAAGAGAGGTTAA

Protein sequence

MSTAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAKRG*

Homology

[Close]

BLAST of Chy3G061360 vs. ExPASy Swiss-Prot
Match: Q9SZY7 (V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.5e-76
Identity = 158/180 (87.78%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   MSTAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS    L  +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+AP
Sbjct: 1   MSGVVALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

[Close]

BLAST of Chy3G061360 vs. ExPASy Swiss-Prot
Match: Q9SLA2 (V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE=1 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.0e-75
Identity = 156/177 (88.14%), Postives = 166/177 (93.79%), Query Frame = 0


Query: 4   AAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRIT 63
           + V   +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+APRIT
Sbjct: 2   SGVAIHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRIT 61

Query: 64  SKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANL 123
           SKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGFANL
Sbjct: 62  SKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANL 121

Query: 124 VCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 181
           VCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 122 VCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 178

[Close]

BLAST of Chy3G061360 vs. ExPASy Swiss-Prot
Match: P23968 (V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VMA16 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.8e-46
Identity = 94/165 (56.97%), Postives = 135/165 (81.82%), Query Frame = 0


Query: 12  SWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVI 71
           ++ + L+  SPY ++ +GIA+ +G+SV+GAAWGI+ITGSS+IGA ++APRIT+KNLIS+I
Sbjct: 46  NFGKFLLRTSPYMWANLGIALCVGLSVVGAAWGIFITGSSMIGAGVRAPRITTKNLISII 105

Query: 72  FCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGI 131
           FCE VAIYG+I+AI+  +KL   +A  +Y+  +L  GY++F +GI VG +NL+CG+ VGI
Sbjct: 106 FCEVVAIYGLIIAIVFSSKLTVATAENMYSKSNLYTGYSLFWAGITVGASNLICGIAVGI 165

Query: 132 IGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQAS 177
            G++ A+SDA +S+LFVKILVIEIFGS LGL G+IVG++M+ +AS
Sbjct: 166 TGATAAISDAADSALFVKILVIEIFGSILGLLGLIVGLLMAGKAS 210

[Close]

BLAST of Chy3G061360 vs. ExPASy Swiss-Prot
Match: Q91V37 (V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6v0b PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.7e-44
Identity = 94/160 (58.75%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 17  LINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 76
           L   SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 77  AIYGVIVAIILQTKLESVSASQIYA--PESLRAGYAIFASGIIVGFANLVCGLCVGIIGS 136
           AIYG+I+AI++    E  SA++  A    +  AGY++F +G+ VG +NL CG+CVGI+GS
Sbjct: 101 AIYGIIMAIVISNMAEPFSATEPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS 160

Query: 137 SCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 175
             AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

[Close]

BLAST of Chy3G061360 vs. ExPASy Swiss-Prot
Match: Q2TA24 (V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.5e-44
Identity = 93/160 (58.13%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 17  LINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 76
           L   SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 77  AIYGVIVAIILQTKLESVSAS--QIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGS 136
           AIYG+I+AI++    E  SA+  +     +  AGY++F +G+ VG +NL CG+CVGI+GS
Sbjct: 101 AIYGIIMAIVISNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS 160

Query: 137 SCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 175
             AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

[Close]

BLAST of Chy3G061360 vs. ExPASy TrEMBL
Match: A0A5A7V9W8 (V-type proton ATPase subunit c''1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002840 PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.8e-86
Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSTAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSTAAVLARSSSWARAL+NISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVLARSSSWARALVNISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

[Close]

BLAST of Chy3G061360 vs. ExPASy TrEMBL
Match: A0A1S3BBZ9 (V-type proton ATPase subunit c''1 OS=Cucumis melo OX=3656 GN=LOC103488269 PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.8e-86
Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSTAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSTAAVLARSSSWARAL+NISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVLARSSSWARALVNISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

[Close]

BLAST of Chy3G061360 vs. ExPASy TrEMBL
Match: A0A0A0LQ28 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379870 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.5e-85
Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MSTAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSTA VL RSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAVVLTRSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

[Close]

BLAST of Chy3G061360 vs. ExPASy TrEMBL
Match: A0A6J1KLI7 (V-type proton ATPase subunit c''2 OS=Cucurbita maxima OX=3661 GN=LOC111496333 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.7e-84
Identity = 177/182 (97.25%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MSTAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSTAAV+A SSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
            G
Sbjct: 181 TG 182

[Close]

BLAST of Chy3G061360 vs. ExPASy TrEMBL
Match: A0A6J1GJZ5 (V-type proton ATPase subunit c''2 OS=Cucurbita moschata OX=3662 GN=LOC111454590 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.7e-84
Identity = 177/182 (97.25%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MSTAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSTAAV+A SSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
            G
Sbjct: 181 TG 182

[Close]

BLAST of Chy3G061360 vs. NCBI nr
Match: XP_008445147.1 (PREDICTED: V-type proton ATPase subunit c''1 [Cucumis melo] >KAA0064963.1 V-type proton ATPase subunit c''1 [Cucumis melo var. makuwa])

HSP 1 Score: 329 bits (843), Expect = 5.51e-113
Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSTAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSTAAVLARSSSWARAL+NISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVLARSSSWARALVNISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 182
           RG
Sbjct: 181 RG 182

[Close]

BLAST of Chy3G061360 vs. NCBI nr
Match: XP_038885623.1 (V-type proton ATPase subunit c''1 [Benincasa hispida])

HSP 1 Score: 326 bits (836), Expect = 6.43e-112
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MSTAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+A VLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 182
           RG
Sbjct: 181 RG 182

[Close]

BLAST of Chy3G061360 vs. NCBI nr
Match: XP_004138742.1 (V-type proton ATPase subunit c''1 [Cucumis sativus] >KGN62907.1 hypothetical protein Csa_021826 [Cucumis sativus])

HSP 1 Score: 326 bits (836), Expect = 6.43e-112
Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MSTAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSTA VL RSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAVVLTRSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 182
           RG
Sbjct: 181 RG 182

[Close]

BLAST of Chy3G061360 vs. NCBI nr
Match: XP_022951859.1 (V-type proton ATPase subunit c''2 [Cucurbita moschata] >XP_023002516.1 V-type proton ATPase subunit c''2 [Cucurbita maxima] >XP_023536708.1 V-type proton ATPase subunit c''2-like [Cucurbita pepo subsp. pepo] >KAG6585444.1 V-type proton ATPase subunit c''1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020363.1 V-type proton ATPase subunit c''1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323 bits (827), Expect = 1.51e-110
Identity = 177/182 (97.25%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MSTAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSTAAV+A SSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 182
            G
Sbjct: 181 TG 182

[Close]

BLAST of Chy3G061360 vs. NCBI nr
Match: XP_023547273.1 (V-type proton ATPase subunit c''1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320 bits (821), Expect = 1.24e-109
Identity = 175/182 (96.15%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MSTAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSTA ++ARSSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAVLVARSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVS+SQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSSSQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 182
            G
Sbjct: 181 TG 182

[Close]

BLAST of Chy3G061360 vs. TAIR 10
Match: AT4G32530.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 287.0 bits (733), Expect = 1.1e-77
Identity = 158/180 (87.78%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   MSTAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS    L  +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+AP
Sbjct: 1   MSGVVALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

[Close]

BLAST of Chy3G061360 vs. TAIR 10
Match: AT2G25610.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 284.3 bits (726), Expect = 7.1e-77
Identity = 156/177 (88.14%), Postives = 166/177 (93.79%), Query Frame = 0


Query: 4   AAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRIT 63
           + V   +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+APRIT
Sbjct: 2   SGVAIHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRIT 61

Query: 64  SKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANL 123
           SKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGFANL
Sbjct: 62  SKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANL 121

Query: 124 VCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 181
           VCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 122 VCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 178

[Close]

BLAST of Chy3G061360 vs. TAIR 10
Match: AT4G32530.2 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 271.2 bits (692), Expect = 6.2e-73
Identity = 158/210 (75.24%), Postives = 167/210 (79.52%), Query Frame = 0


Query: 1   MSTAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS    L  +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+AP
Sbjct: 1   MSGVVALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCG------------------------------LCVGIIGSSCALSDAQNSSLFVKI 180
           ANLVCG                              LCVGIIGSSCALSDAQNS+LFVKI
Sbjct: 121 ANLVCGSVSTLFSFLTVLVFGFHCQICNRGPHFSCRLCVGIIGSSCALSDAQNSTLFVKI 180

[Close]

BLAST of Chy3G061360 vs. TAIR 10
Match: AT1G75630.1 (vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 )

HSP 1 Score: 84.7 bits (208), Expect = 8.3e-17
Identity = 53/151 (35.10%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 25  FSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 84
           F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 15  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 74

Query: 85  IILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS 144
           +I+ T +   + S       L  GYA  +SG+  G A L  G+ +GI+G +   ++AQ  
Sbjct: 75  VIISTGINPKAKSYY-----LFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQP 134

Query: 145 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 135 KLFVGMILILIFAEALALYGLIVGIILSSRA 160

[Close]

BLAST of Chy3G061360 vs. TAIR 10
Match: AT1G19910.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 84.7 bits (208), Expect = 8.3e-17
Identity = 53/151 (35.10%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 25  FSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 84
           F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 14  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 73

Query: 85  IILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS 144
           +I+ T +   + S       L  GYA  +SG+  G A L  G+ +GI+G +   ++AQ  
Sbjct: 74  VIISTGINPKAKSYY-----LFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQP 133

Query: 145 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 134 KLFVGMILILIFAEALALYGLIVGIILSSRA 159

The following BLAST results are available for this feature:

BLAST of Chy3G061360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZY7	1.5e-76	87.78	V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE...	[more]
Q9SLA2	1.0e-75	88.14	V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE...	[more]
P23968	2.8e-46	56.97	V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508...	[more]
Q91V37	2.7e-44	58.75	V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6...	[more]
Q2TA24	4.5e-44	58.13	V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B...	[more]

BLAST of Chy3G061360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V9W8	3.8e-86	99.45	V-type proton ATPase subunit c''1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A1S3BBZ9	3.8e-86	99.45	V-type proton ATPase subunit c''1 OS=Cucumis melo OX=3656 GN=LOC103488269 PE=3 S...	[more]
A0A0A0LQ28	2.5e-85	98.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379870 PE=3 SV=1	[more]
A0A6J1KLI7	2.7e-84	97.25	V-type proton ATPase subunit c''2 OS=Cucurbita maxima OX=3661 GN=LOC111496333 PE...	[more]
A0A6J1GJZ5	2.7e-84	97.25	V-type proton ATPase subunit c''2 OS=Cucurbita moschata OX=3662 GN=LOC111454590 ...	[more]

BLAST of Chy3G061360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445147.1	5.51e-113	99.45	PREDICTED: V-type proton ATPase subunit c''1 [Cucumis melo] >KAA0064963.1 V-type...	[more]
XP_038885623.1	6.43e-112	98.90	V-type proton ATPase subunit c''1 [Benincasa hispida]	[more]
XP_004138742.1	6.43e-112	98.90	V-type proton ATPase subunit c''1 [Cucumis sativus] >KGN62907.1 hypothetical pro...	[more]
XP_022951859.1	1.51e-110	97.25	V-type proton ATPase subunit c''2 [Cucurbita moschata] >XP_023002516.1 V-type pr...	[more]
XP_023547273.1	1.24e-109	96.15	V-type proton ATPase subunit c''1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy3G061360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32530.1	1.1e-77	87.78	ATPase, F0/V0 complex, subunit C protein	[more]
AT2G25610.1	7.1e-77	88.14	ATPase, F0/V0 complex, subunit C protein	[more]
AT4G32530.2	6.2e-73	75.24	ATPase, F0/V0 complex, subunit C protein	[more]
AT1G75630.1	8.3e-17	35.10	vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4	[more]
AT1G19910.1	8.3e-17	35.10	ATPase, F0/V0 complex, subunit C protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000245	V-ATPase proteolipid subunit	PRINTS	PR00122	VACATPASE	coord: 67..91 score: 34.11 coord: 123..149 score: 35.96 coord: 41..65 score: 23.26 coord: 150..173 score: 47.15
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 28..87 e-value: 1.1E-14 score: 54.5 coord: 112..171 e-value: 8.8E-10 score: 38.8
None	No IPR available	GENE3D	1.20.120.610		coord: 23..177 e-value: 3.6E-52 score: 178.0
None	No IPR available	PANTHER	PTHR10263:SF56	V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT	coord: 4..179
None	No IPR available	PANTHER	PTHR10263	V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT	coord: 4..179
None	No IPR available	CDD	cd18177	ATP-synt_Vo_c_ATP6F_rpt1	coord: 25..87 e-value: 8.38139E-26 score: 91.9403
None	No IPR available	CDD	cd18178	ATP-synt_Vo_c_ATP6F_rpt2	coord: 107..171 e-value: 6.6144E-25 score: 89.8735
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 104..172
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 21..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G061360.1	Chy3G061360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
molecular_function	GO:0015078	proton transmembrane transporter activity