Chy3G060800 (gene) Cucumber (hystrix) v1

Overview
NameChy3G060800
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionStress induced protein
LocationchrH03: 14387757 .. 14388295 (-)
RNA-Seq ExpressionChy3G060800
SyntenyChy3G060800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCTCAATTTTTATTCTATCCTCTCTCTCTCTTAATCGCTCCATCCCAGGTTTTGCTTCTTCCACAATGCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCCCATTGATGGAGCCTTGCGATCCCAGGATGATCATCGGATCGAGGAGGGAGAAGATCTTCGTGATCAAGTAGGAGTTTCGTATTCTTCATGTGGATGTTTCTTCGGATTTGGATCCAGACTGTCTCGTGTTCGAGGCGGGTATTTACCGCTGCAATCGAATCGGAAGAGCGAAGAAGTGAAGCAGCAGCAGAGTTGGATGATGAAGAAGGTGAAGAGATTGAACGAGATTATAAAAGCTGTGGCAGGACGGAAGTGGAGAAGTTTGATTAATGGAATAATTAACAAGAGACGGAGTGTGAGGTTTCAGTACGATCCCAGGAGTTATGCTCTGAATTTTGATGAAGGGATCGAGGAAGAAGCACGCCATACTCTCCACCCGATCGGACTGGGGATTGGAATCGACAGAAACCAAATATGA

mRNA sequence

ATGGCCGCTCAATTTTTATTCTATCCTCTCTCTCTCTTAATCGCTCCATCCCAGGATGATCATCGGATCGAGGAGGGAGAAGATCTTCGTGATCAAGTAGGAGTTTCGTATTCTTCATGTGGATGTTTCTTCGGATTTGGATCCAGACTGTCTCGTGTTCGAGGCGGGTATTTACCGCTGCAATCGAATCGGAAGAGCGAAGAAGTGAAGCAGCAGCAGAGTTGGATGATGAAGAAGGTGAAGAGATTGAACGAGATTATAAAAGCTGTGGCAGGACGGAAGTGGAGAAGTTTGATTAATGGAATAATTAACAAGAGACGGAGTGTGAGGTTTCAGTACGATCCCAGGAGTTATGCTCTGAATTTTGATGAAGGGATCGAGGAAGAAGCACGCCATACTCTCCACCCGATCGGACTGGGGATTGGAATCGACAGAAACCAAATATGA

Coding sequence (CDS)

ATGGCCGCTCAATTTTTATTCTATCCTCTCTCTCTCTTAATCGCTCCATCCCAGGATGATCATCGGATCGAGGAGGGAGAAGATCTTCGTGATCAAGTAGGAGTTTCGTATTCTTCATGTGGATGTTTCTTCGGATTTGGATCCAGACTGTCTCGTGTTCGAGGCGGGTATTTACCGCTGCAATCGAATCGGAAGAGCGAAGAAGTGAAGCAGCAGCAGAGTTGGATGATGAAGAAGGTGAAGAGATTGAACGAGATTATAAAAGCTGTGGCAGGACGGAAGTGGAGAAGTTTGATTAATGGAATAATTAACAAGAGACGGAGTGTGAGGTTTCAGTACGATCCCAGGAGTTATGCTCTGAATTTTGATGAAGGGATCGAGGAAGAAGCACGCCATACTCTCCACCCGATCGGACTGGGGATTGGAATCGACAGAAACCAAATATGA

Protein sequence

MAAQFLFYPLSLLIAPSQDDHRIEEGEDLRDQVGVSYSSCGCFFGFGSRLSRVRGGYLPLQSNRKSEEVKQQQSWMMKKVKRLNEIIKAVAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGIEEEARHTLHPIGLGIGIDRNQI*
Homology
BLAST of Chy3G060800 vs. ExPASy TrEMBL
Match: A0A0A0LPP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382480 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.3e-62
Identity = 121/134 (90.30%), Postives = 125/134 (93.28%), Query Frame = 0

Query: 15  APSQDDHRIEEGEDLRDQVGVSYSSCGCFFGFGSRLSRVRGGYLPLQSNRKSEEVKQQQS 74
           +P     R EEGEDLRDQVGVSYSSCGCFFGF SRLSRVRGGYLPLQSNRK+EEVKQ QS
Sbjct: 12  SPIDGTLRSEEGEDLRDQVGVSYSSCGCFFGFRSRLSRVRGGYLPLQSNRKTEEVKQHQS 71

Query: 75  WMMKKVKRLNEIIKAVAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGIEEEARHTL 134
           WMM KVKRLNEIIKAVAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGIEEEARHTL
Sbjct: 72  WMMTKVKRLNEIIKAVAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGIEEEARHTL 131

Query: 135 HPIGLGIGIDRNQI 149
           HPIGLGIG++RNQI
Sbjct: 132 HPIGLGIGMNRNQI 145

BLAST of Chy3G060800 vs. ExPASy TrEMBL
Match: A0A5A7VG87 (Stress induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002220 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 5.2e-57
Identity = 115/132 (87.12%), Postives = 123/132 (93.18%), Query Frame = 0

Query: 19  DDHRIEEGEDLRDQV--GVSYSSCGCFFGFGSRLSRVRGGYLPLQSNRKSEEVKQQQSWM 78
           +D RIEEGEDLRD+   G SYSSCGCFFGFGSRLSRVRGGYLPLQSNRKSEEVK QQSWM
Sbjct: 21  EDDRIEEGEDLRDEEVGGFSYSSCGCFFGFGSRLSRVRGGYLPLQSNRKSEEVK-QQSWM 80

Query: 79  MKKVKRLNEIIKAVAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGIEEEARHTLHP 138
           M+KVKRLNEIIKA+AGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEG+EEE R +L P
Sbjct: 81  MRKVKRLNEIIKAMAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGMEEEGRRSLQP 140

Query: 139 IGLGIGIDRNQI 149
           IGLGIG++RNQI
Sbjct: 141 IGLGIGMNRNQI 151

BLAST of Chy3G060800 vs. ExPASy TrEMBL
Match: A0A1S3BC68 (uncharacterized protein LOC103488331 OS=Cucumis melo OX=3656 GN=LOC103488331 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 5.2e-57
Identity = 115/132 (87.12%), Postives = 123/132 (93.18%), Query Frame = 0

Query: 19  DDHRIEEGEDLRDQV--GVSYSSCGCFFGFGSRLSRVRGGYLPLQSNRKSEEVKQQQSWM 78
           +D RIEEGEDLRD+   G SYSSCGCFFGFGSRLSRVRGGYLPLQSNRKSEEVK QQSWM
Sbjct: 21  EDDRIEEGEDLRDEEVGGFSYSSCGCFFGFGSRLSRVRGGYLPLQSNRKSEEVK-QQSWM 80

Query: 79  MKKVKRLNEIIKAVAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGIEEEARHTLHP 138
           M+KVKRLNEIIKA+AGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEG+EEE R +L P
Sbjct: 81  MRKVKRLNEIIKAMAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGMEEEGRRSLQP 140

Query: 139 IGLGIGIDRNQI 149
           IGLGIG++RNQI
Sbjct: 141 IGLGIGMNRNQI 151

BLAST of Chy3G060800 vs. ExPASy TrEMBL
Match: A0A6J1K5B0 (uncharacterized protein LOC111492425 OS=Cucurbita maxima OX=3661 GN=LOC111492425 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.2e-34
Identity = 86/114 (75.44%), Postives = 93/114 (81.58%), Query Frame = 0

Query: 22  RIEEGEDL---RDQVGVSYSSCGCFFGFGSRLSR---VRGGYLPLQSNRKSEEVKQQQSW 81
           RIEEG D     D+VGVSYSSCGCFFGFGSRLSR   VR  YL L   R++EEVK  QSW
Sbjct: 22  RIEEGNDRDLDLDEVGVSYSSCGCFFGFGSRLSRSSSVRCRYLLL---RENEEVK--QSW 81

Query: 82  MMKKVKRLNEIIKAVAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGIEEE 130
           MMKKVKR  +IIKA+AGRKWRS INGI+NKRRSVRFQYDPRSYALNFDEG+ EE
Sbjct: 82  MMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDPRSYALNFDEGMGEE 130

BLAST of Chy3G060800 vs. ExPASy TrEMBL
Match: A0A6J1BV09 (uncharacterized protein LOC111004972 OS=Momordica charantia OX=3673 GN=LOC111004972 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.1e-34
Identity = 90/141 (63.83%), Postives = 105/141 (74.47%), Query Frame = 0

Query: 22  RIEEGEDLRDQVGV-SYSSCGCFFGFGSRLSR----VRGGYLPLQSNRKSEEVKQQQSWM 81
           RIEE +D   +VGV SYSSCGCFFGFGSR +R    VR  YLPLQ +    E + +QSWM
Sbjct: 21  RIEEDDD--REVGVSSYSSCGCFFGFGSRQARSSDGVRCRYLPLQPH----EDQVKQSWM 80

Query: 82  MKKVKRLNEIIKAVAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGIEEE----ARH 141
           MKKVKR  EIIKAVAGRKWRS I+GII+K+RSVRFQYDPRSYALNFDEG  E+     RH
Sbjct: 81  MKKVKRFKEIIKAVAGRKWRSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRH 140

Query: 142 -----TLHPIGLGIGIDRNQI 149
                +  PIGLGIG++R+Q+
Sbjct: 141 GFRAPSATPIGLGIGMNRSQV 155

BLAST of Chy3G060800 vs. NCBI nr
Match: XP_011649836.1 (uncharacterized protein LOC105434671 [Cucumis sativus] >KGN62974.1 hypothetical protein Csa_021917 [Cucumis sativus])

HSP 1 Score: 243 bits (621), Expect = 2.72e-80
Identity = 121/134 (90.30%), Postives = 125/134 (93.28%), Query Frame = 0

Query: 15  APSQDDHRIEEGEDLRDQVGVSYSSCGCFFGFGSRLSRVRGGYLPLQSNRKSEEVKQQQS 74
           +P     R EEGEDLRDQVGVSYSSCGCFFGF SRLSRVRGGYLPLQSNRK+EEVKQ QS
Sbjct: 12  SPIDGTLRSEEGEDLRDQVGVSYSSCGCFFGFRSRLSRVRGGYLPLQSNRKTEEVKQHQS 71

Query: 75  WMMKKVKRLNEIIKAVAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGIEEEARHTL 134
           WMM KVKRLNEIIKAVAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGIEEEARHTL
Sbjct: 72  WMMTKVKRLNEIIKAVAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGIEEEARHTL 131

Query: 135 HPIGLGIGIDRNQI 148
           HPIGLGIG++RNQI
Sbjct: 132 HPIGLGIGMNRNQI 145

BLAST of Chy3G060800 vs. NCBI nr
Match: XP_008445245.1 (PREDICTED: uncharacterized protein LOC103488331 [Cucumis melo] >KAA0064905.1 stress induced protein [Cucumis melo var. makuwa])

HSP 1 Score: 227 bits (579), Expect = 8.34e-74
Identity = 115/132 (87.12%), Postives = 123/132 (93.18%), Query Frame = 0

Query: 19  DDHRIEEGEDLRDQV--GVSYSSCGCFFGFGSRLSRVRGGYLPLQSNRKSEEVKQQQSWM 78
           +D RIEEGEDLRD+   G SYSSCGCFFGFGSRLSRVRGGYLPLQSNRKSEEVKQQ SWM
Sbjct: 21  EDDRIEEGEDLRDEEVGGFSYSSCGCFFGFGSRLSRVRGGYLPLQSNRKSEEVKQQ-SWM 80

Query: 79  MKKVKRLNEIIKAVAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGIEEEARHTLHP 138
           M+KVKRLNEIIKA+AGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEG+EEE R +L P
Sbjct: 81  MRKVKRLNEIIKAMAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGMEEEGRRSLQP 140

Query: 139 IGLGIGIDRNQI 148
           IGLGIG++RNQI
Sbjct: 141 IGLGIGMNRNQI 151

BLAST of Chy3G060800 vs. NCBI nr
Match: KAG7029494.1 (hypothetical protein SDJN02_07833, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166 bits (420), Expect = 1.75e-49
Identity = 98/144 (68.06%), Postives = 106/144 (73.61%), Query Frame = 0

Query: 22  RIEEGEDLR-----DQVGVSYSSCGCFFGFGSRLSR---VRGGYLPLQSNRKSEEVKQQQ 81
           RIEEG D       D+VGVSYSSCGCFFGFGSRLSR   VR  YL L+ N   EEVKQ  
Sbjct: 22  RIEEGNDRDRDLDLDEVGVSYSSCGCFFGFGSRLSRSSSVRCQYLLLREN---EEVKQ-- 81

Query: 82  SWMMKKVKRLNEIIKAVAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGI-EEEARH 141
           SWMMKKVKR  +IIKA+AGRKWRS INGI+NKRRSVRFQYDPRSYALNFDEGI EEE R 
Sbjct: 82  SWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDPRSYALNFDEGIGEEEGRG 141

Query: 142 TLH--------PIGLGIGIDRNQI 148
             H        PIGLG G++ +QI
Sbjct: 142 GRHGFRQPFASPIGLGTGMNTSQI 160

BLAST of Chy3G060800 vs. NCBI nr
Match: XP_022997532.1 (uncharacterized protein LOC111492425 [Cucurbita maxima])

HSP 1 Score: 154 bits (390), Expect = 4.34e-45
Identity = 91/132 (68.94%), Postives = 97/132 (73.48%), Query Frame = 0

Query: 22  RIEEGEDLR---DQVGVSYSSCGCFFGFGSRLSR---VRGGYLPLQSNRKSEEVKQQQSW 81
           RIEEG D     D+VGVSYSSCGCFFGFGSRLSR   VR  YL L+ N   EEVKQ  SW
Sbjct: 22  RIEEGNDRDLDLDEVGVSYSSCGCFFGFGSRLSRSSSVRCRYLLLREN---EEVKQ--SW 81

Query: 82  MMKKVKRLNEIIKAVAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGIEEE----AR 141
           MMKKVKR  +IIKA+AGRKWRS INGI+NKRRSVRFQYDPRSYALNFDEG+ EE     R
Sbjct: 82  MMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDPRSYALNFDEGMGEEEGGGGR 141

BLAST of Chy3G060800 vs. NCBI nr
Match: KAG6598556.1 (hypothetical protein SDJN03_08334, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 155 bits (391), Expect = 1.10e-44
Identity = 89/119 (74.79%), Postives = 94/119 (78.99%), Query Frame = 0

Query: 22  RIEEGEDLR-----DQVGVSYSSCGCFFGFGSRLSR---VRGGYLPLQSNRKSEEVKQQQ 81
           RIEEG D       D+VGVSYSSCGCFFGFGSRLSR   VR  YL L+ N   EEVKQ  
Sbjct: 22  RIEEGNDRDRDLDLDEVGVSYSSCGCFFGFGSRLSRSSSVRCQYLLLREN---EEVKQ-- 81

Query: 82  SWMMKKVKRLNEIIKAVAGRKWRSLINGIINKRRSVRFQYDPRSYALNFDEGI-EEEAR 131
           SWMMKKVKR  +IIKA+AGRKWRS INGI+NKRRSVRFQYDPRSYALNFDEGI EEE R
Sbjct: 82  SWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDPRSYALNFDEGIGEEEGR 135

BLAST of Chy3G060800 vs. TAIR 10
Match: AT5G25240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-07
Identity = 38/102 (37.25%), Postives = 52/102 (50.98%), Query Frame = 0

Query: 36  SYSSCGCFFGF-------GSRLSRVRGGYLP-LQSNRKSEEVKQQQSWMMKKVKRLNEII 95
           ++  CG F  F       G   SR RGG+   LQ  R+        +W  +K+K L EI 
Sbjct: 18  AFCGCGYFRSFSFTRWRRGDDESRSRGGWSGCLQEERRG-------NWGSEKLKGLKEIS 77

Query: 96  KAVAGRKW----RSLINGIINKRRSVRFQYDPRSYALNFDEG 126
           + +AG KW    RS  +G    RR V F YD ++Y+LNFD+G
Sbjct: 78  EKIAGPKWKNFIRSFSSGRKKMRRDVDFTYDLKNYSLNFDDG 112

BLAST of Chy3G060800 vs. TAIR 10
Match: AT5G62865.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48020.1). )

HSP 1 Score: 43.9 bits (102), Expect = 1.3e-04
Identity = 30/103 (29.13%), Postives = 46/103 (44.66%), Query Frame = 0

Query: 40  CGCFFGFGSRLSRVRGGY------LPLQSNRKSEEVKQQQSWMMKKVKRLNEIIKAVAGR 99
           C CF  F    S    GY        +  +  S +   +  W ++   ++ E  + VAG 
Sbjct: 20  CCCFPSFRRSRSSTAVGYSSWGRIRTVDDSNHSGDHGDEPRWWIRASLKIREWSEIVAGP 79

Query: 100 KWRSLINGIINKRR-------SVRFQYDPRSYALNFDEGIEEE 130
           +W++ I       R       S +FQYDP SY+LNFD+  EE+
Sbjct: 80  RWKTFIRRFNRDPRRGRDWDASEKFQYDPLSYSLNFDDDDEED 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LPP65.3e-6290.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382480 PE=4 SV=1[more]
A0A5A7VG875.2e-5787.12Stress induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold8... [more]
A0A1S3BC685.2e-5787.12uncharacterized protein LOC103488331 OS=Cucumis melo OX=3656 GN=LOC103488331 PE=... [more]
A0A6J1K5B01.2e-3475.44uncharacterized protein LOC111492425 OS=Cucurbita maxima OX=3661 GN=LOC111492425... [more]
A0A6J1BV092.1e-3463.83uncharacterized protein LOC111004972 OS=Momordica charantia OX=3673 GN=LOC111004... [more]
Match NameE-valueIdentityDescription
XP_011649836.12.72e-8090.30uncharacterized protein LOC105434671 [Cucumis sativus] >KGN62974.1 hypothetical ... [more]
XP_008445245.18.34e-7487.12PREDICTED: uncharacterized protein LOC103488331 [Cucumis melo] >KAA0064905.1 str... [more]
KAG7029494.11.75e-4968.06hypothetical protein SDJN02_07833, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022997532.14.34e-4568.94uncharacterized protein LOC111492425 [Cucurbita maxima][more]
KAG6598556.11.10e-4474.79hypothetical protein SDJN03_08334, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
AT5G25240.11.3e-0737.25unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G62865.11.3e-0429.13unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33168STRESS INDUCED PROTEIN-RELATEDcoord: 23..131
NoneNo IPR availablePANTHERPTHR33168:SF46NHL DOMAIN PROTEINcoord: 23..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G060800.1Chy3G060800.1mRNA