
Chy3G060780 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTTGAAGGACGAGTGGTTTTCTGCCGCCATGGCCGATGACACCGTCGTCGTCGAGTTACTCGTTCGTCTCAAGCAGTCTCAAGCCTCCTCCTCCATTAAATCTCCCGTTATTCCTCCCAGATGGGGTCTCAGGCAACGCCGTTCCAGGATTCTTTCCCCTTTCCGTTTCGATGCCGTTGCTCACAAGAATAAGGACTCTACCTCCACCAGATGCAGCCCCACCACACCTCTCTCTTGGAGTGGCGATACATCTCCCTCTGCTACCGCCGATGGATTCGAAGAGTCCAGTCATCCATCCGAATTCTCCCTCTCCTCCAGATCCAAGGTTCTTTCTCGATTCTACTTTTTTTCTATTTCTCTCAATCTTCATTTCAGTTTTTTTTTTCTTTTTTGTTTCTCCCTCTCTCTCTTGTTTTGGGTTAAATACAGAGCCCTCGATCTTCATCATGGCAGTTTCCTTTCCCCTGTATTTGCCGAATTTATCCGCCGACAAACGAGTATTTCTCTCCTCGTGGCTGACTCTGTCACCCCACAAGATGAATTGCTCGTATTTTGTCAAAGACGTATTCGAAACAAGAACCCCACAATTTCGTTTTGGACGATGGCGCCCTTTTCCTCTGTTTTTCGTTCTTATTAGCGGCGTTAAGTGAAGAGTAATGAAGTCCAGAACTGAAAGTTTCTGAACGGAAGGAGCCGATATGCACGGAATAGTGGTGGGGATCAGAATCATCAGATCGATATTCTCGTCATCTGAGAACGGCGTTAGAGATAGGATGCGTTTGGTTTTCGCAAAGTCATCGAACAAAGTATGTTTGTTTATCCTCTGTTCTCGAGAGCAGAGTAGTTAGTTTATGCGCGTATGTCCCACGTACAACTCTCCCAATAATCAGACGGCTTGGAAATGAACAATCTCGAAATGTTTGTTTAGCCATTATTATTTAATCCTTTGGATTCTCAGATCTGAAGGTCAATGATCTTCTTTTTCATCTTTTTCCCTTCCTTGTTGGCAATTGTTTTTCATTTTGAAGAGCCATGAAATTGAAAGAAGAGAGGCACGTGAAGGGTCACGCGAGTAATTGAAAGTAAGATTCTGAAGAAGAAATTGGGGTTTAGACTATAGTTAGATTGATGAGCCTCCATGTGGGTTTGATGATGTGGCCTTTAATTACTGGTTTATCAAAGTTTAAAAAAGAAAAAATATATATAAAACAGGGCCCCCCTTTTTTAAAAATTTTTCTGAATGTAATTGTGGACTTTTGTGTTTCTTTTTTTTCTTTGTAGTTTCTGTATAAAGAAACTGAAATCTGATGGGTTGACCTTTTGTGCAGGGTTGTGGTATTAATGAATTCACTTCTAGCACTGCCATGGCCAAGAGGTTAAAAAGAAGGAAGGTAAAAATTCCCATCTTGTGTTCAGTGTTCCAATTCTTGTAATCTCATTTGGTCGTTGGTGATTAATTATTAGTCTTTTTTCTTATCTTACTTTATTATTCTGAATTACCCATAACTTTTTCAGGCATTGACTGATCTGAGAGTGGAGGAGTCTTTACTTTTGAAGGAAAGGGTACATCTCAAAAAGGTGTGTTTGCTGTTCTAAAGCAAAGAAGATTCCTGAATTGGAGAGAATTAGTGTAGTTGTTACTGAATGAATACTAGTTTGTGTGTTTTAGAATTATTTTTGCAACATTTCTAAAGTGTATGTTTTTGACTGATTTAATCACGGTATTCTGCCTTTGCTAACTTTTTCTTTGGGGGGAGTGAGTTTGTGTTTTGAGTTTAAACTTCTTAGATCTATGATCTATCCTTATTCCTTACTGCTACAGCTCTTTAATTTTGAAAAGTGCTTTTGGAAAAAGTTGTCATTAGCATTTATTTGAAAATAAAAAAACTTCACAAGTTTTCAATCAAAGCCATCCTTTTGTTTTTTTTCCTAATGTAAGTCGATTGGTTTTGAACAGGAGTTGGAAAGCTTACATGCGACATTCAAGGAACAGACGACTAACAATGAAAAGTTGAAGAAAATGAAGGTGATTAAAAAAATTTCCCTCAGAACCCAGGTGAAAATAGTATCTTAAAATATTAAGAAATGTGAGACATTGATGTTGATCTTTTGGTAATGTATGAACACTAAACGTCTATGTGTATTATATATAATAATATGTGAGCCTACCTTGCGATCTTTGCTGTTGGCTCTTCTGATTTGAACTTCTTACGTTTTTCAGCTCAATATGAATTTCAATACATCATCAGATCATCTTCGGGACATGTCGAAGCCAGTAGCTTCCAATCTACAGTGCCAAAGGGCGGATCCTACAACTGAAAGCGTTCCTGCAACTTTACCGATACAAACCGTACCTGGAAACAGTTCACAATCAGAATCAAACAAGAGACAGGAAATAAATTCAATGGAATGTGGTGGTTTCTTTCTACCTGATCTTAATATGATCCCAGCTGAGGACTGTCTCTGA ATGGTGTTGAAGGACGAGTGGTTTTCTGCCGCCATGGCCGATGACACCGTCGTCGTCGAGTTACTCGTTCGTCTCAAGCAGTCTCAAGCCTCCTCCTCCATTAAATCTCCCGTTATTCCTCCCAGATGGGGTCTCAGGCAACGCCGTTCCAGGATTCTTTCCCCTTTCCGTTTCGATGCCGTTGCTCACAAGAATAAGGACTCTACCTCCACCAGATGCAGCCCCACCACACCTCTCTCTTGGAGTGGCGATACATCTCCCTCTGCTACCGCCGATGGATTCGAAGAGTCCAGTCATCCATCCGAATTCTCCCTCTCCTCCAGATCCAAGGTTCTTTCTCGATTCTACTTTTTTTCTATTTCTCTCAATCTTCATTTCAGTTTTTTTTTTCTTTTTTGTTTCTCCCTCTCTCTCTTGTTTTGGGTTAAATACAGAGCCCTCGATCTTCATCATGGCAGTTTCCTTTCCCCTGTATTTGCCGAATTTATCCGCCGACAAACGAGTATTTCTCTCCTCGTGGCTGACTCTGTCACCCCACAAGATGAATTGCTCGTATTTTGTCAAAGACGAGCCGATATGCACGGAATAGTGGTGGGGATCAGAATCATCAGATCGATATTCTCGTCATCTGAGAACGGCGTTAGAGATAGGATGCGTTTGGTTTTCGCAAAGTCATCGAACAAAGGTTGTGGTATTAATGAATTCACTTCTAGCACTGCCATGGCCAAGAGGTTAAAAAGAAGGAAGGCATTGACTGATCTGAGAGTGGAGGAGTCTTTACTTTTGAAGGAAAGGGTACATCTCAAAAAGGAGTTGGAAAGCTTACATGCGACATTCAAGGAACAGACGACTAACAATGAAAAGTTGAAGAAAATGAAGCTCAATATGAATTTCAATACATCATCAGATCATCTTCGGGACATGTCGAAGCCAGTAGCTTCCAATCTACAGTGCCAAAGGGCGGATCCTACAACTGAAAGCGTTCCTGCAACTTTACCGATACAAACCGTACCTGGAAACAGTTCACAATCAGAATCAAACAAGAGACAGGAAATAAATTCAATGGAATGTGGTGGTTTCTTTCTACCTGATCTTAATATGATCCCAGCTGAGGACTGTCTCTGA ATGGTGTTGAAGGACGAGTGGTTTTCTGCCGCCATGGCCGATGACACCGTCGTCGTCGAGTTACTCGTTCGTCTCAAGCAGTCTCAAGCCTCCTCCTCCATTAAATCTCCCGTTATTCCTCCCAGATGGGGTCTCAGGCAACGCCGTTCCAGGATTCTTTCCCCTTTCCGTTTCGATGCCGTTGCTCACAAGAATAAGGACTCTACCTCCACCAGATGCAGCCCCACCACACCTCTCTCTTGGAGTGGCGATACATCTCCCTCTGCTACCGCCGATGGATTCGAAGAGTCCAGTCATCCATCCGAATTCTCCCTCTCCTCCAGATCCAAGGTTCTTTCTCGATTCTACTTTTTTTCTATTTCTCTCAATCTTCATTTCAGTTTTTTTTTTCTTTTTTGTTTCTCCCTCTCTCTCTTGTTTTGGGTTAAATACAGAGCCCTCGATCTTCATCATGGCAGTTTCCTTTCCCCTGTATTTGCCGAATTTATCCGCCGACAAACGAGTATTTCTCTCCTCGTGGCTGACTCTGTCACCCCACAAGATGAATTGCTCGTATTTTGTCAAAGACGAGCCGATATGCACGGAATAGTGGTGGGGATCAGAATCATCAGATCGATATTCTCGTCATCTGAGAACGGCGTTAGAGATAGGATGCGTTTGGTTTTCGCAAAGTCATCGAACAAAGGTTGTGGTATTAATGAATTCACTTCTAGCACTGCCATGGCCAAGAGGTTAAAAAGAAGGAAGGCATTGACTGATCTGAGAGTGGAGGAGTCTTTACTTTTGAAGGAAAGGGTACATCTCAAAAAGGAGTTGGAAAGCTTACATGCGACATTCAAGGAACAGACGACTAACAATGAAAAGTTGAAGAAAATGAAGCTCAATATGAATTTCAATACATCATCAGATCATCTTCGGGACATGTCGAAGCCAGTAGCTTCCAATCTACAGTGCCAAAGGGCGGATCCTACAACTGAAAGCGTTCCTGCAACTTTACCGATACAAACCGTACCTGGAAACAGTTCACAATCAGAATCAAACAAGAGACAGGAAATAAATTCAATGGAATGTGGTGGTTTCTTTCTACCTGATCTTAATATGATCCCAGCTGAGGACTGTCTCTGA MVLKDEWFSAAMADDTVVVELLVRLKQSQASSSIKSPVIPPRWGLRQRRSRILSPFRFDAVAHKNKDSTSTRCSPTTPLSWSGDTSPSATADGFEESSHPSEFSLSSRSKVLSRFYFFSISLNLHFSFFFLFCFSLSLLFWVKYRALDLHHGSFLSPVFAEFIRRQTSISLLVADSVTPQDELLVFCQRRADMHGIVVGIRIIRSIFSSSENGVRDRMRLVFAKSSNKGCGINEFTSSTAMAKRLKRRKALTDLRVEESLLLKERVHLKKELESLHATFKEQTTNNEKLKKMKLNMNFNTSSDHLRDMSKPVASNLQCQRADPTTESVPATLPIQTVPGNSSQSESNKRQEINSMECGGFFLPDLNMIPAEDCL* Homology
BLAST of Chy3G060780 vs. ExPASy TrEMBL
Match: A0A0A0LQC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382500 PE=4 SV=1) HSP 1 Score: 417.2 bits (1071), Expect = 7.5e-113 Identity = 246/375 (65.60%), Postives = 249/375 (66.40%), Query Frame = 0
BLAST of Chy3G060780 vs. ExPASy TrEMBL
Match: A0A5A7V9R4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002200 PE=4 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 1.0e-109 Identity = 217/245 (88.57%), Postives = 221/245 (90.20%), Query Frame = 0
BLAST of Chy3G060780 vs. ExPASy TrEMBL
Match: A0A6J1HCA4 (uncharacterized protein LOC111462771 OS=Cucurbita moschata OX=3662 GN=LOC111462771 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 1.9e-87 Identity = 208/379 (54.88%), Postives = 227/379 (59.89%), Query Frame = 0
BLAST of Chy3G060780 vs. ExPASy TrEMBL
Match: A0A6J1BQL2 (uncharacterized protein LOC111004554 OS=Momordica charantia OX=3673 GN=LOC111004554 PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 1.2e-86 Identity = 207/378 (54.76%), Postives = 218/378 (57.67%), Query Frame = 0
BLAST of Chy3G060780 vs. ExPASy TrEMBL
Match: A0A6J1KBK0 (uncharacterized protein LOC111491811 OS=Cucurbita maxima OX=3661 GN=LOC111491811 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 1.2e-83 Identity = 205/379 (54.09%), Postives = 223/379 (58.84%), Query Frame = 0
BLAST of Chy3G060780 vs. NCBI nr
Match: XP_004138712.1 (uncharacterized protein LOC101213579 [Cucumis sativus] >KGN62977.1 hypothetical protein Csa_022542 [Cucumis sativus]) HSP 1 Score: 415 bits (1066), Expect = 1.48e-142 Identity = 246/375 (65.60%), Postives = 249/375 (66.40%), Query Frame = 0
BLAST of Chy3G060780 vs. NCBI nr
Match: KAA0064903.1 (uncharacterized protein E6C27_scaffold82G002200 [Cucumis melo var. makuwa]) HSP 1 Score: 403 bits (1036), Expect = 1.04e-136 Identity = 217/245 (88.57%), Postives = 221/245 (90.20%), Query Frame = 0
BLAST of Chy3G060780 vs. NCBI nr
Match: XP_038886620.1 (uncharacterized protein LOC120076783 isoform X1 [Benincasa hispida]) HSP 1 Score: 382 bits (982), Expect = 9.25e-130 Identity = 228/377 (60.48%), Postives = 239/377 (63.40%), Query Frame = 0
BLAST of Chy3G060780 vs. NCBI nr
Match: KAG7029492.1 (hypothetical protein SDJN02_07831 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 342 bits (876), Expect = 3.91e-113 Identity = 217/379 (57.26%), Postives = 246/379 (64.91%), Query Frame = 0
BLAST of Chy3G060780 vs. NCBI nr
Match: XP_022962277.1 (uncharacterized protein LOC111462771 [Cucurbita moschata]) HSP 1 Score: 330 bits (845), Expect = 4.93e-109 Identity = 208/379 (54.88%), Postives = 227/379 (59.89%), Query Frame = 0
BLAST of Chy3G060780 vs. TAIR 10
Match: AT4G32030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 63 Blast hits to 59 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 89.0 bits (219), Expect = 9.0e-18 Identity = 109/381 (28.61%), Postives = 150/381 (39.37%), Query Frame = 0
BLAST of Chy3G060780 vs. TAIR 10
Match: AT4G32030.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 74.7 bits (182), Expect = 1.8e-13 Identity = 53/117 (45.30%), Postives = 67/117 (57.26%), Query Frame = 0
BLAST of Chy3G060780 vs. TAIR 10
Match: AT5G25210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 69.7 bits (169), Expect = 5.6e-12 Identity = 51/119 (42.86%), Postives = 69/119 (57.98%), Query Frame = 0
BLAST of Chy3G060780 vs. TAIR 10
Match: AT1G80610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 73 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 55; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). ) HSP 1 Score: 62.0 bits (149), Expect = 1.2e-09 Identity = 43/119 (36.13%), Postives = 59/119 (49.58%), Query Frame = 0
HSP 2 Score: 41.6 bits (96), Expect = 1.6e-03 Identity = 24/58 (41.38%), Postives = 37/58 (63.79%), Query Frame = 0
BLAST of Chy3G060780 vs. TAIR 10
Match: AT1G15800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 56 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 2.2e-08 Identity = 43/117 (36.75%), Postives = 60/117 (51.28%), Query Frame = 0
HSP 2 Score: 44.7 bits (104), Expect = 1.9e-04 Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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