Chy3G060020 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G060020
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	NDR1/HIN1-like protein 13
Location	chrH03: 13813357 .. 13814079 (-)
RNA-Seq Expression	Chy3G060020
Synteny	Chy3G060020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGCCGGAGCCGGAGCCGGTTCACCCTCCTCCTCCTCCGCCCGACTCTCTTTTCTTCTCTTCTGGTACCTACGTTGTCCAAATCCCTAAAGACCAAATCTACCGTATCCCTCCACCCGAAAATGCCCTCATCGTCGAACGTCATCGTAACCCATCTGTCGTCACCTCCTCTCGTCGCCGCTCATGTTGCTTTCGCATCTTCCTCCCTATCTTCATCCTTCTTCTCCTCATCATCATCCTAGCCCTCCTCCTCCCTCCTCTTCTCACCCTTCCCAAACCCCCTGTCATTGAGCTTAAGAAATTCAAACTCACTCCGTCCACACGCAATTTCCTTATCAACCTTGATATTCTTAACCCAAACTCCGTCGGCTCCATCTCCTTCAAATCTCCCTCACGTGTCTCCCTCTCCTTCCGAAAAAACCAACTTGCCACAACTAAATTCCCTCTCATTCGTCAACAACATGGCTCCGAGAAAAAGGTTGCATTGTCACTTCGCGCCAAATCGGCGTTCCCTAAGGAGTTGCAACGGCGGATGAAAAATAATAAGACTAAGCTCCACACTTCCTTGTCGTTAAAGATGAATCTTGCTGCCCAAACGATAGGACGACTGTCGAATCGTCGGAATGTCAAATTTGTTGTCACTTGTAGCTTCACTGTCAACACGTTGGGTAAAAATTCACGAATATTATCGCAAGATTGTGAAAGTGAACGGCAATGA

mRNA sequence

ATGGCGGAGCCGGAGCCGGAGCCGGTTCACCCTCCTCCTCCTCCGCCCGACTCTCTTTTCTTCTCTTCTGGTACCTACGTTGTCCAAATCCCTAAAGACCAAATCTACCGTATCCCTCCACCCGAAAATGCCCTCATCGTCGAACGTCATCGTAACCCATCTGTCGTCACCTCCTCTCGTCGCCGCTCATGTTGCTTTCGCATCTTCCTCCCTATCTTCATCCTTCTTCTCCTCATCATCATCCTAGCCCTCCTCCTCCCTCCTCTTCTCACCCTTCCCAAACCCCCTGTCATTGAGCTTAAGAAATTCAAACTCACTCCGTCCACACGCAATTTCCTTATCAACCTTGATATTCTTAACCCAAACTCCGTCGGCTCCATCTCCTTCAAATCTCCCTCACGTGTCTCCCTCTCCTTCCGAAAAAACCAACTTGCCACAACTAAATTCCCTCTCATTCGTCAACAACATGGCTCCGAGAAAAAGGTTGCATTGTCACTTCGCGCCAAATCGGCGTTCCCTAAGGAGTTGCAACGGCGGATGAAAAATAATAAGACTAAGCTCCACACTTCCTTGTCGTTAAAGATGAATCTTGCTGCCCAAACGATAGGACGACTGTCGAATCGTCGGAATGTCAAATTTGTTGTCACTTGTAGCTTCACTGTCAACACGTTGGGTAAAAATTCACGAATATTATCGCAAGATTGTGAAAGTGAACGGCAATGA

Coding sequence (CDS)

ATGGCGGAGCCGGAGCCGGAGCCGGTTCACCCTCCTCCTCCTCCGCCCGACTCTCTTTTCTTCTCTTCTGGTACCTACGTTGTCCAAATCCCTAAAGACCAAATCTACCGTATCCCTCCACCCGAAAATGCCCTCATCGTCGAACGTCATCGTAACCCATCTGTCGTCACCTCCTCTCGTCGCCGCTCATGTTGCTTTCGCATCTTCCTCCCTATCTTCATCCTTCTTCTCCTCATCATCATCCTAGCCCTCCTCCTCCCTCCTCTTCTCACCCTTCCCAAACCCCCTGTCATTGAGCTTAAGAAATTCAAACTCACTCCGTCCACACGCAATTTCCTTATCAACCTTGATATTCTTAACCCAAACTCCGTCGGCTCCATCTCCTTCAAATCTCCCTCACGTGTCTCCCTCTCCTTCCGAAAAAACCAACTTGCCACAACTAAATTCCCTCTCATTCGTCAACAACATGGCTCCGAGAAAAAGGTTGCATTGTCACTTCGCGCCAAATCGGCGTTCCCTAAGGAGTTGCAACGGCGGATGAAAAATAATAAGACTAAGCTCCACACTTCCTTGTCGTTAAAGATGAATCTTGCTGCCCAAACGATAGGACGACTGTCGAATCGTCGGAATGTCAAATTTGTTGTCACTTGTAGCTTCACTGTCAACACGTTGGGTAAAAATTCACGAATATTATCGCAAGATTGTGAAAGTGAACGGCAATGA

Protein sequence

MAEPEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSRRRSCCFRIFLPIFILLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDILNPNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFPKELQRRMKNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESERQ*

Homology

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BLAST of Chy3G060020 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.3e-08
Identity = 64/243 (26.34%), Postives = 106/243 (43.62%), Query Frame = 0


Query: 8   PVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSRRRS---C 67
           P  P PPP         TYV+Q+PKDQIYRIPPPENA     HR   +      RS   C
Sbjct: 27  PKKPAPPP--------STYVIQVPKDQIYRIPPPENA-----HRFEQLSRKKTNRSNCRC 86

Query: 68  CFRIFLPIFILLLLIIILALLLPPLLTLPKPPVIELKKFKL--------TPSTRNFLINL 127
           CF  FL    +L+++  ++  +  L+  P+ P   ++ F +        +P + +F + +
Sbjct: 87  CFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTV 146

Query: 128 DILNPNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLR-AKSAFPKE 187
              N N    + ++  S V + +    ++    P+  Q   +   V L L  +K      
Sbjct: 147 RSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSG 206

Query: 188 LQRRMKNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDC 239
           +++ M+N  +K      LK+    +          +   V C  TV+ L   SRI+S+ C
Sbjct: 207 MRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKC 256

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BLAST of Chy3G060020 vs. ExPASy TrEMBL
Match: A0A0A0LK43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G307330 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 8.7e-123
Identity = 238/240 (99.17%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MAEPEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSR 60
           MAEPEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSR
Sbjct: 1   MAEPEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSR 60

Query: 61  RRSCCFRIFLPIFILLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDILN 120
           RRSCCFRIFLPIF+LLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDILN
Sbjct: 61  RRSCCFRIFLPIFVLLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDILN 120

Query: 121 PNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFPKELQRRM 180
           PNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFPKEL+RRM
Sbjct: 121 PNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFPKELKRRM 180

Query: 181 KNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESERQ 240
           KNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESERQ
Sbjct: 181 KNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESERQ 240

[Close]

BLAST of Chy3G060020 vs. ExPASy TrEMBL
Match: A0A5A7VCB9 (NDR1/HIN1-like protein 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001420 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.2e-109
Identity = 216/240 (90.00%), Postives = 226/240 (94.17%), Query Frame = 0


Query: 1   MAEPEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSR 60
           MAE E EPVHPPPPPPD  FFSSGTYVVQIPKDQIYRIPPPENALIV+RHRNPSVVTSSR
Sbjct: 1   MAELELEPVHPPPPPPDPPFFSSGTYVVQIPKDQIYRIPPPENALIVQRHRNPSVVTSSR 60

Query: 61  RRSCCFRIFLPIFILLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDILN 120
           RRSCCFRIFLPIFI+LLLIIILALL+PPL+ LPKPPV +L KFKLTPSTRNF INLDILN
Sbjct: 61  RRSCCFRIFLPIFIVLLLIIILALLIPPLIALPKPPVFKLTKFKLTPSTRNFNINLDILN 120

Query: 121 PNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFPKELQRRM 180
           PNS GSISFKSPSRVSLSFRK+QLATTKFPLIRQ HGS+K VALSLRAKSAFPKELQRRM
Sbjct: 121 PNSAGSISFKSPSRVSLSFRKSQLATTKFPLIRQDHGSKKNVALSLRAKSAFPKELQRRM 180

Query: 181 KNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESERQ 240
           K++KTKLHTSLSLKMNL A+T GRLSNRRNVKFVVTCSFTVNTLGK SRILSQDCESERQ
Sbjct: 181 KSSKTKLHTSLSLKMNLLAETKGRLSNRRNVKFVVTCSFTVNTLGKTSRILSQDCESERQ 240

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BLAST of Chy3G060020 vs. ExPASy TrEMBL
Match: A0A1S3BD32 (uncharacterized protein LOC103488571 OS=Cucumis melo OX=3656 GN=LOC103488571 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.2e-109
Identity = 216/240 (90.00%), Postives = 226/240 (94.17%), Query Frame = 0


Query: 1   MAEPEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSR 60
           MAE E EPVHPPPPPPD  FFSSGTYVVQIPKDQIYRIPPPENALIV+RHRNPSVVTSSR
Sbjct: 1   MAELELEPVHPPPPPPDPPFFSSGTYVVQIPKDQIYRIPPPENALIVQRHRNPSVVTSSR 60

Query: 61  RRSCCFRIFLPIFILLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDILN 120
           RRSCCFRIFLPIFI+LLLIIILALL+PPL+ LPKPPV +L KFKLTPSTRNF INLDILN
Sbjct: 61  RRSCCFRIFLPIFIVLLLIIILALLIPPLIALPKPPVFKLTKFKLTPSTRNFNINLDILN 120

Query: 121 PNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFPKELQRRM 180
           PNS GSISFKSPSRVSLSFRK+QLATTKFPLIRQ HGS+K VALSLRAKSAFPKELQRRM
Sbjct: 121 PNSAGSISFKSPSRVSLSFRKSQLATTKFPLIRQDHGSKKNVALSLRAKSAFPKELQRRM 180

Query: 181 KNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESERQ 240
           K++KTKLHTSLSLKMNL A+T GRLSNRRNVKFVVTCSFTVNTLGK SRILSQDCESERQ
Sbjct: 181 KSSKTKLHTSLSLKMNLLAETKGRLSNRRNVKFVVTCSFTVNTLGKTSRILSQDCESERQ 240

[Close]

BLAST of Chy3G060020 vs. ExPASy TrEMBL
Match: A0A6J1KBM3 (NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111492422 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 2.0e-79
Identity = 170/246 (69.11%), Postives = 198/246 (80.49%), Query Frame = 0


Query: 1   MAEPEPE-----PVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSV 60
           MAEPE       PVHP         FS GTYV+QIPKDQIYRIPPPENA IVE HRNPSV
Sbjct: 1   MAEPERTHSNLLPVHPG--------FSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSV 60

Query: 61  VTSSRRRSCCFRIFLPIFILLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLIN 120
            TS+RRRSCCFRIF+PIFI+LL I+ILAL+LPPLLT PKPP+ +L KF+ TPSTRNF I+
Sbjct: 61  STSNRRRSCCFRIFVPIFIVLLFILILALVLPPLLTPPKPPIFKLTKFRFTPSTRNFHID 120

Query: 121 LDILNPNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAK-SAFPK 180
           L+ILNPN  G I FKSPS VSL FRK+++A  KFPLI+Q+HGS++ VAL+L  K S+FPK
Sbjct: 121 LNILNPNPSGFIEFKSPSHVSLFFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPK 180

Query: 181 ELQRRMKNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQD 240
           EL+RR+KNNK+KL TS+SL M+L A T GRLS RR+VKFVV CSFTVNT GK+S ILSQD
Sbjct: 181 ELERRIKNNKSKLKTSMSLMMDLPAHTKGRLSTRRDVKFVVICSFTVNTFGKHSHILSQD 238

[Close]

BLAST of Chy3G060020 vs. ExPASy TrEMBL
Match: A0A6J1KRQ0 (NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111496611 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 8.6e-78
Identity = 160/227 (70.48%), Postives = 185/227 (81.50%), Query Frame = 0


Query: 16  PDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSRRRSCCFRIFLPIFIL 75
           PD   FSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSV +S  RRSCC R FLPI  L
Sbjct: 13  PDPPIFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVESSQHRRSCCLRFFLPIAAL 72

Query: 76  LLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDILNPNSVGSISFKSPSRV 135
           LL+II+L +LLPPLL  PKPP+++L  FKL PS  +F I L+I NPNSVGS+SFKSPS  
Sbjct: 73  LLVIILLTVLLPPLLASPKPPIVKLTTFKLAPSGHDFHIKLNIHNPNSVGSMSFKSPSHA 132

Query: 136 SLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAK--SAFPKELQRRMKNNKTKLHTSLSL 195
            LSFRK++LAT KFPLI Q+HGSE+ V LS  AK  S+FPKE +RRM++ K+KLH ++SL
Sbjct: 133 FLSFRKHELATAKFPLIHQEHGSEEHVTLSFHAKSSSSFPKEFKRRMEDKKSKLHVAMSL 192

Query: 196 KMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESERQ 241
           KMNL  +TIGRLS  RNV+FVV CSFTVNTL KNS+ILS DCES+RQ
Sbjct: 193 KMNLPTETIGRLSMHRNVEFVVVCSFTVNTLEKNSKILSHDCESKRQ 239

[Close]

BLAST of Chy3G060020 vs. NCBI nr
Match: XP_004150661.1 (NDR1/HIN1-like protein 13 [Cucumis sativus] >KAE8652926.1 hypothetical protein Csa_017751 [Cucumis sativus])

HSP 1 Score: 451 bits (1159), Expect = 3.08e-159
Identity = 238/240 (99.17%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MAEPEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSR 60
           MAEPEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSR
Sbjct: 1   MAEPEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSR 60

Query: 61  RRSCCFRIFLPIFILLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDILN 120
           RRSCCFRIFLPIF+LLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDILN
Sbjct: 61  RRSCCFRIFLPIFVLLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDILN 120

Query: 121 PNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFPKELQRRM 180
           PNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFPKEL+RRM
Sbjct: 121 PNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFPKELKRRM 180

Query: 181 KNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESERQ 240
           KNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESERQ
Sbjct: 181 KNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESERQ 240

[Close]

BLAST of Chy3G060020 vs. NCBI nr
Match: XP_008445591.1 (PREDICTED: uncharacterized protein LOC103488571 [Cucumis melo] >KAA0064830.1 NDR1/HIN1-like protein 13 [Cucumis melo var. makuwa])

HSP 1 Score: 405 bits (1042), Expect = 2.09e-141
Identity = 216/240 (90.00%), Postives = 226/240 (94.17%), Query Frame = 0


Query: 1   MAEPEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSR 60
           MAE E EPVHPPPPPPD  FFSSGTYVVQIPKDQIYRIPPPENALIV+RHRNPSVVTSSR
Sbjct: 1   MAELELEPVHPPPPPPDPPFFSSGTYVVQIPKDQIYRIPPPENALIVQRHRNPSVVTSSR 60

Query: 61  RRSCCFRIFLPIFILLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDILN 120
           RRSCCFRIFLPIFI+LLLIIILALL+PPL+ LPKPPV +L KFKLTPSTRNF INLDILN
Sbjct: 61  RRSCCFRIFLPIFIVLLLIIILALLIPPLIALPKPPVFKLTKFKLTPSTRNFNINLDILN 120

Query: 121 PNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFPKELQRRM 180
           PNS GSISFKSPSRVSLSFRK+QLATTKFPLIRQ HGS+K VALSLRAKSAFPKELQRRM
Sbjct: 121 PNSAGSISFKSPSRVSLSFRKSQLATTKFPLIRQDHGSKKNVALSLRAKSAFPKELQRRM 180

Query: 181 KNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESERQ 240
           K++KTKLHTSLSLKMNL A+T GRLSNRRNVKFVVTCSFTVNTLGK SRILSQDCESERQ
Sbjct: 181 KSSKTKLHTSLSLKMNLLAETKGRLSNRRNVKFVVTCSFTVNTLGKTSRILSQDCESERQ 240

[Close]

BLAST of Chy3G060020 vs. NCBI nr
Match: XP_038885823.1 (NDR1/HIN1-like protein 13, partial [Benincasa hispida])

HSP 1 Score: 353 bits (906), Expect = 1.64e-120
Identity = 188/236 (79.66%), Postives = 206/236 (87.29%), Query Frame = 0


Query: 5   EPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSRRRSC 64
           EPE V+ PPPPPD   FS+GTYVVQIPKDQIYRIPPPENALIVERHRNPS+ TSSRRRSC
Sbjct: 18  EPERVYSPPPPPDPSLFSAGTYVVQIPKDQIYRIPPPENALIVERHRNPSITTSSRRRSC 77

Query: 65  CFRIFLPIFILLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDILNPNSV 124
           C RIFLPIF + +LI++LALLLPPLLT PKPPV +L KFKLTPST  F INLDILNPNS 
Sbjct: 78  CLRIFLPIFFVFVLILLLALLLPPLLTPPKPPVFDLIKFKLTPSTHKFHINLDILNPNSA 137

Query: 125 GSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFPKELQRRMKNNK 184
           GSISFKSPSR SLSFRK +LAT KFPLIR +HGS++ VALSL AKS+FPKELQRRMKN K
Sbjct: 138 GSISFKSPSRASLSFRKQKLATAKFPLIRTEHGSQRHVALSLHAKSSFPKELQRRMKN-K 197

Query: 185 TKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESERQ 240
           +KLH S+SLKM+L A+T  RLS RR VKFVV CSFTVNTLGKNSRILSQDC+SERQ
Sbjct: 198 SKLHISMSLKMDLPAETTSRLSTRREVKFVVVCSFTVNTLGKNSRILSQDCQSERQ 252

[Close]

BLAST of Chy3G060020 vs. NCBI nr
Match: KAG6598677.1 (NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 311 bits (796), Expect = 5.48e-104
Identity = 174/246 (70.73%), Postives = 197/246 (80.08%), Query Frame = 0


Query: 1   MAEPEPE-----PVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSV 60
           MAEPE       PVHP         FS GTYV+QIPKDQIYRIPPPENA IVE HRNPSV
Sbjct: 1   MAEPERIHSNLLPVHP--------GFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSV 60

Query: 61  VTSSRRRSCCFRIFLPIFILLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLIN 120
            TS RRRSCCFRIFLPIFI+LL I+ILAL+LPPLLT PKPPV +L KF+ TPSTR+F I 
Sbjct: 61  STSKRRRSCCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIV 120

Query: 121 LDILNPNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSA-FPK 180
           L+ILNPN  G I  KSPS  SLSFRK+++A  KFPLI+Q+HGS++ VAL+L  KS+ FPK
Sbjct: 121 LNILNPNPSGFIELKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPK 180

Query: 181 ELQRRMKNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQD 240
           EL+RR+KNNK+KL TS+SL M+L A T GRLS RRNVKFVV CSFTVNTLGKNS ILSQD
Sbjct: 181 ELERRIKNNKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQD 238

[Close]

BLAST of Chy3G060020 vs. NCBI nr
Match: KAG7029623.1 (NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310 bits (793), Expect = 1.57e-103
Identity = 173/246 (70.33%), Postives = 197/246 (80.08%), Query Frame = 0


Query: 1   MAEPEPE-----PVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSV 60
           MAEPE       PVHP         FS GTYV+QIPKDQIYRIPPPENA IVE HRNPSV
Sbjct: 1   MAEPERIHSNLLPVHP--------GFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSV 60

Query: 61  VTSSRRRSCCFRIFLPIFILLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLIN 120
            TS RRRSCCFRIFLPIFI+LL I+ILAL+LPPLLT PKPPV +L KF+ TPSTR+F I 
Sbjct: 61  STSKRRRSCCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIV 120

Query: 121 LDILNPNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSA-FPK 180
           L+ILNPN  G I  KSPS  SL+FRK+++A  KFPLI+Q+HGS++ VAL+L  KS+ FPK
Sbjct: 121 LNILNPNPYGFIELKSPSHASLTFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPK 180

Query: 181 ELQRRMKNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQD 240
           EL+RR+KNNK+KL TS+SL M+L A T GRLS RRNVKFVV CSFTVNTLGKNS ILSQD
Sbjct: 181 ELERRIKNNKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVICSFTVNTLGKNSHILSQD 238

[Close]

BLAST of Chy3G060020 vs. TAIR 10
Match: AT2G22180.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 76.3 bits (186), Expect = 3.9e-14
Identity = 84/247 (34.01%), Postives = 118/247 (47.77%), Query Frame = 0


Query: 4   PEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVE-RHRNPSVVTSSRRR 63
           P P    PP PPPDS+     TYVVQ+P+DQ+Y  PPPE+A  VE R +NP     ++++
Sbjct: 59  PLPTTSSPPLPPPDSI-PELETYVVQVPRDQVYWTPPPEHAKYVEKRSKNPE---KNKKK 118

Query: 64  SCC-----FRIFLPIFILLL--LIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLIN 123
            C      F I L IF  LL  +I+IL     P L     PV  +++  + PS  NF + 
Sbjct: 119 GCSKRLLWFFIILVIFGFLLGAIILILHFAFNPTL-----PVFAVERLTVNPS--NFEVT 178

Query: 124 LDILNPNSVGSISFKSPSR--VSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFP 183
           L   NP S   + +       VSL+++   L + KFP + Q      KV + L   S   
Sbjct: 179 LRAENPTSNMGVRYMMEKNGVVSLTYKNKSLGSGKFPGLSQAASGSDKVNVKLNG-STKN 238

Query: 184 KELQRRMKNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTL--GKNSRIL 239
             +Q R       L  ++ LK    A  +     +RN + VVTC   V  L   K   I+
Sbjct: 239 AVVQPRGSKQPVVLMLNMELKAEYEAGPV-----KRNKEVVVTCDVKVKGLLDAKKVEIV 288

[Close]

BLAST of Chy3G060020 vs. TAIR 10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-09
Identity = 64/243 (26.34%), Postives = 106/243 (43.62%), Query Frame = 0


Query: 8   PVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSRRRS---C 67
           P  P PPP         TYV+Q+PKDQIYRIPPPENA     HR   +      RS   C
Sbjct: 27  PKKPAPPP--------STYVIQVPKDQIYRIPPPENA-----HRFEQLSRKKTNRSNCRC 86

Query: 68  CFRIFLPIFILLLLIIILALLLPPLLTLPKPPVIELKKFKL--------TPSTRNFLINL 127
           CF  FL    +L+++  ++  +  L+  P+ P   ++ F +        +P + +F + +
Sbjct: 87  CFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTV 146

Query: 128 DILNPNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLR-AKSAFPKE 187
              N N    + ++  S V + +    ++    P+  Q   +   V L L  +K      
Sbjct: 147 RSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSG 206

Query: 188 LQRRMKNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDC 239
           +++ M+N  +K      LK+    +          +   V C  TV+ L   SRI+S+ C
Sbjct: 207 MRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKC 256

[Close]

BLAST of Chy3G060020 vs. TAIR 10
Match: AT2G27080.2 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-09
Identity = 64/243 (26.34%), Postives = 106/243 (43.62%), Query Frame = 0


Query: 8   PVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSRRRS---C 67
           P  P PPP         TYV+Q+PKDQIYRIPPPENA     HR   +      RS   C
Sbjct: 27  PKKPAPPP--------STYVIQVPKDQIYRIPPPENA-----HRFEQLSRKKTNRSNCRC 86

Query: 68  CFRIFLPIFILLLLIIILALLLPPLLTLPKPPVIELKKFKL--------TPSTRNFLINL 127
           CF  FL    +L+++  ++  +  L+  P+ P   ++ F +        +P + +F + +
Sbjct: 87  CFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTV 146

Query: 128 DILNPNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLR-AKSAFPKE 187
              N N    + ++  S V + +    ++    P+  Q   +   V L L  +K      
Sbjct: 147 RSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSG 206

Query: 188 LQRRMKNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDC 239
           +++ M+N  +K      LK+    +          +   V C  TV+ L   SRI+S+ C
Sbjct: 207 MRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKC 256

[Close]

BLAST of Chy3G060020 vs. TAIR 10
Match: AT5G21130.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 55.8 bits (133), Expect = 5.4e-08
Identity = 63/242 (26.03%), Postives = 105/242 (43.39%), Query Frame = 0


Query: 14  PPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSRRRSCCFRIFLPIF 73
           PPP       GTYV+++PKDQIYR+PPPENA     HR   +      +SCC R      
Sbjct: 53  PPP-------GTYVIKLPKDQIYRVPPPENA-----HRYEYLSRRKTNKSCCRRCLCYSL 112

Query: 74  ILLLLIIILALLLPPLLTL---PKPPVIELKKFKLT------PSTRNFLINLDILNPNSV 133
             LL+II+LA +      L   P  P   +    +T       S  + +I + + + N  
Sbjct: 113 SALLIIIVLAAIAFGFFYLVYQPHKPQFSVSGVSVTGINLTSSSPFSPVIRIKLRSQNVK 172

Query: 134 GSIS--FKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVAL-----SLRAKSAFPKELQ 193
           G +   ++  +   + F   +L   +F   +Q  G+   +       S++ KS+  KEL 
Sbjct: 173 GKLGLIYEKGNEADVFFNGTKLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKELT 232

Query: 194 RRMKNNKTK--LHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDC 238
              K  K    L     +K  + + T   ++        V C  TV+ L  ++ + +++C
Sbjct: 233 ESQKKGKVPFGLRIKAPVKFKVGSVTTWTMT------ITVDCKITVDKLTASATVKTENC 276

[Close]

BLAST of Chy3G060020 vs. TAIR 10
Match: AT4G39745.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 53.9 bits (128), Expect = 2.1e-07
Identity = 70/241 (29.05%), Postives = 96/241 (39.83%), Query Frame = 0


Query: 4   PEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSRRRS 63
           P   P  PPPP P        TYVV +P+DQ+Y IPPP+NA             SS+   
Sbjct: 64  PHVSPSSPPPPDP---IPEIETYVVHVPRDQVYWIPPPDNA------------GSSKDAG 123

Query: 64  CCFRIFLPIFILLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDILNPNS 123
              R                      +  P+PPV  +KK +    +R+F I L   NP S
Sbjct: 124 IAIR--------------------GEIIKPEPPVFNVKKLE---KSRHFEIMLTSKNPTS 183

Query: 124 VGSISFKSPSRVSLSFRKNQLATTKFP----LIRQQHGSEKKVALSLRAKSAFPKELQRR 183
              +++K    VSL+++   L    FP     +   H    K+  S+ A +  P E+   
Sbjct: 184 TMWVTYK--GLVSLTYKNKNLGQGNFPELSLAVSGSHTVNLKLDRSMNA-AVLPPEV--- 243

Query: 184 MKNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTL--GKNSRILSQDCES 239
                     SL L M L A   G    +R  +  VTC   VN L       I+S+ CES
Sbjct: 244 ---------VSLVLTMGLDA-GFGTGLVKRAKEVAVTCDIKVNGLLDAHKVEIVSESCES 250

The following BLAST results are available for this feature:

BLAST of Chy3G060020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVD2	5.3e-08	26.34	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]

BLAST of Chy3G060020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK43	8.7e-123	99.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G307330 PE=4 SV=1	[more]
A0A5A7VCB9	3.2e-109	90.00	NDR1/HIN1-like protein 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3BD32	3.2e-109	90.00	uncharacterized protein LOC103488571 OS=Cucumis melo OX=3656 GN=LOC103488571 PE=...	[more]
A0A6J1KBM3	2.0e-79	69.11	NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111492422 PE=4 SV=1	[more]
A0A6J1KRQ0	8.6e-78	70.48	NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111496611 PE=4 SV=1	[more]

BLAST of Chy3G060020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150661.1	3.08e-159	99.17	NDR1/HIN1-like protein 13 [Cucumis sativus] >KAE8652926.1 hypothetical protein C...	[more]
XP_008445591.1	2.09e-141	90.00	PREDICTED: uncharacterized protein LOC103488571 [Cucumis melo] >KAA0064830.1 NDR...	[more]
XP_038885823.1	1.64e-120	79.66	NDR1/HIN1-like protein 13, partial [Benincasa hispida]	[more]
KAG6598677.1	5.48e-104	70.73	NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7029623.1	1.57e-103	70.33	NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Chy3G060020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22180.1	3.9e-14	34.01	hydroxyproline-rich glycoprotein family protein	[more]
AT2G27080.1	3.7e-09	26.34	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G27080.2	3.7e-09	26.34	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G21130.1	5.4e-08	26.03	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G39745.1	2.1e-07	29.05	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 7..238
None	No IPR available	PANTHER	PTHR31852:SF159	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN	coord: 7..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G060020.1	Chy3G060020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane