Chy3G057400 (gene) Cucumber (hystrix) v1

Overview
NameChy3G057400
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionchloroplast processing peptidase-like
LocationchrH03: 10242100 .. 10244541 (-)
RNA-Seq ExpressionChy3G057400
SyntenyChy3G057400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCTTTTTGAGGCCCTTTCTGTTTTACTCTTCGCTGCGATGGATGCCTTTTCACAGTTGGGGTTTTCCCAGATGGCCTGGCTTTGACGCTTTCCTTAGATTTCTTGTCCTTTTGATCTTGTGGTCTATGCTTTTGGAGATTCATTCCATTCCTTCCTCATCAATGTATCCAACTCTTCGTGTTGGCGATCGAATTCTTGTCGAGACGGTAATATTTCAAGCTGGGTTTTGTATTTATCTGTCGAATTATGTGCTTAATTTTTTTTTTTTTAATTTCAGACTTCGATTAGGTTTTAGGGTATTTTTGTGCATGCGATGTGAAAATGGATTGAGATTTTAAGCGTGGTTATGATGAAGCTCGATCGATCGACTGAATCTTCAAAATTATGTGTCAGTTATATCATATTCGAAGAGTATAGATGAATCATGTGTATTAAAGTATTAACTATGCATTAGTTTACAAAAACGTTGGTAGTTTCTTGTTAGTTCTATTATTATATAAAGAAGAAATAATCAAACATATAGAAAACAGTATAAACATGAGCAAGACAACGGAATGTGATTTCTGTAATTTAAACAGAAATTATTGTCGTCTTTATAAGTTTTACAAGAGCCTGTCATTTTTTGACCGCGAAAACTCGTTTTTGAATAGTTTGGTCTAAGCTGAGGTAACATAGCTAGGTGAAAAAAGTAGAGGGACTTTTGGGGGGAATAAGTTTAAACTCTGTAGTATCGATGACCTATGACATTTTGTAACGTCTAAACATTGTCCAATGACATTAGTTGAGACACTCACAGATAACAAAGAAAAGAAAAAGGATGGTTAATGTGATTTAGCTTGACTGTTTTGAAAATTTCCATGTGATCTCTGCTCAAACTAATACCAATGTCCTGGTTGCATTTTCTTCAGGCCTCTTATCTTATCAGAAATCCTTCTATAAATGACATTATAACCTTCCGAGACCCGACACAGGTTAGTTGACAGATGACTAATCTGCATGTCTTTTACTTGAACAGTTTTTCCTAACAGGATCGTGTTGGACTTATGGTGTGCAATAGCAATCTGGACGCAGAGAAGAGAACATTGTTGTAAAGAGAGTTGTTGCCAAAGCCGGAGACACAGTTGAGGTATGGAAGATTGTCGTTATGTTTCTATCGAAAATAACTAGTGATATGAATGTCTAAGACATCAAATTATTATTTATATTTATTTTGATGTAATCTTTGTATTTTCCTATCTTATCCTTTTTATGTTCTATTATTAAGTAGGGGTATTTTTGTCATTTTACTATGATCAATGACGTGGCATTAGGATTTTCATTAGGCAATTGTGGCCTTTGTGCTTAGTTTAGCGCAGGGAGCTTCTTGAATTTGGTAAGTATTGAATTGCATGCCAAGAACATTCAAATGGCATTAATCGTCCTATCTTGTAGAGTGTTCAAAGCTTGAGCAGAACTTGTTCTTGTTCTTGTCTCAAGAGCTTTGATCTTAAGATAATCTGTATCTAACCCAATCCTTAGGGTTGAAATCATATAGATGGAGGGTTCTAATGTTTGAGAATTAGGAATTCTGATAGCAAGAGTTCCTAATTCTAAGTCACTAGTGTTTTCGTATCAATGGGAGTGACCACTTTTTGTGCACTAATAAATGTACAGTTATAGCTACCCTTAAATGGTGACTCTAGTAATAAGAAATTGGGTTTGTTGATGTATCTAAGGTCCAAGCTTTGCCTATACAGAAGATTGTTGCCCGAAATAATTTCGATGAGCTACGAACATAATGCAAGAAATGGGACTCCTCAACAGTCCAGTTATGAAAGAAAATGTATATTGGCAGTTTATGTTTAACTACTTTTCCATTTTATGAGTCACTGACTGCTAAAAACGCCATATCAATTAGCAGGAGAAGAACTTCTAGTGTTGAAGCCAAAGAAACTAACCATTCATGTGGTTTTTGTCCAACACTTTTCAGGTTTGTCAGGGGTGCCTCTATGTCAATGGGGTTGCTAAGGATGAAAGCTTCTTACAGGAGCGGCCAACGTACACCACAAAGCCAACTGTGAGTTTTGTTTGAAACTTGACTTTCGTTTTCATTTTTACTGCTTCCTCCTGCAATTTTCTATGAGAGAGACAAGGCTTTTAAAGCACGTCCTTAGAGATTTTATAGATGAACCGAAATCGTTAAGCCGTCAAGGTGATTTTATAATGCAAAACGAACCCATATTCTTTAGAAATCTTCTTCAGACTGTCATTGATTTTCACCACAGCTAAGTCATTGACATTTTGATCAGTTGTTGGAATCAGACTTGAATAATACTGGTTTCCTACGGAATGTGACTTGTAGTTTGAAGTTTGTAGTTAATTTCACTTGTTTGAAACTTGCAGCAAATTCCAGAAGGCCATGTTTACGTGTTGGGCGACAACCGCAACAACAGCTATGA

mRNA sequence

ATGACCTTTTTGAGGCCCTTTCTGTTTTACTCTTCGCTGCGATGGATGCCTTTTCACAGTTGGGGTTTTCCCAGATGGCCTGGCTTTGACGCTTTCCTTAGATTTCTTGTCCTTTTGATCTTGTGGTCTATGCTTTTGGAGATTCATTCCATTCCTTCCTCATCAATGTATCCAACTCTTCGTGTTGGCGATCGAATTCTTGTCGAGACGGCCTCTTATCTTATCAGAAATCCTTCTATAAATGACATTATAACCTTCCGAGACCCGACACAGCAATCTGGACGCAGAGAAGAGAACATTGTTGTAAAGAGAGTTGTTGCCAAAGCCGGAGACACAGTTGAGGTTTGTCAGGGGTGCCTCTATGTCAATGGGGTTGCTAAGGATGAAAGCTTCTTACAGGAGCGGCCAACGTACACCACAAAGCCAACTTTGTTGGAATCAGACTTGAATAATACTGGTTTCCTACGGAATGTGACTTGTAGTTTGAAGTTTGTAGTTAATTTCACTTGTTTGAAACTTGCAGCAAATTCCAGAAGGCCATGTTTACGTGTTGGGCGACAACCGCAACAACAGCTATGA

Coding sequence (CDS)

ATGACCTTTTTGAGGCCCTTTCTGTTTTACTCTTCGCTGCGATGGATGCCTTTTCACAGTTGGGGTTTTCCCAGATGGCCTGGCTTTGACGCTTTCCTTAGATTTCTTGTCCTTTTGATCTTGTGGTCTATGCTTTTGGAGATTCATTCCATTCCTTCCTCATCAATGTATCCAACTCTTCGTGTTGGCGATCGAATTCTTGTCGAGACGGCCTCTTATCTTATCAGAAATCCTTCTATAAATGACATTATAACCTTCCGAGACCCGACACAGCAATCTGGACGCAGAGAAGAGAACATTGTTGTAAAGAGAGTTGTTGCCAAAGCCGGAGACACAGTTGAGGTTTGTCAGGGGTGCCTCTATGTCAATGGGGTTGCTAAGGATGAAAGCTTCTTACAGGAGCGGCCAACGTACACCACAAAGCCAACTTTGTTGGAATCAGACTTGAATAATACTGGTTTCCTACGGAATGTGACTTGTAGTTTGAAGTTTGTAGTTAATTTCACTTGTTTGAAACTTGCAGCAAATTCCAGAAGGCCATGTTTACGTGTTGGGCGACAACCGCAACAACAGCTATGA

Protein sequence

MTFLRPFLFYSSLRWMPFHSWGFPRWPGFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDPTQQSGRREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLQERPTYTTKPTLLESDLNNTGFLRNVTCSLKFVVNFTCLKLAANSRRPCLRVGRQPQQQL*
Homology
[Close]
BLAST of Chy3G057400 vs. ExPASy Swiss-Prot
Match: Q8H0W1 (Chloroplast processing peptidase OS=Arabidopsis thaliana OX=3702 GN=PLSP1 PE=2 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 1.8e-19
Identity = 55/128 (42.97%), Postives = 71/128 (55.47%), Query Frame = 0 

Query: 23  FPRWPGFDA------FLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIR 82
           FP W  F +      F+   V L     + E   IPS SMYPT  VGDR++ E  SY  R
Sbjct: 104 FPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFR 163

Query: 83  NPSINDIITFRDP--TQQSGRREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLQE 142
            P  NDI+ F+ P   Q+ G  + ++ +KR+VAK GD VEV  G L VNGVA++E F+ E
Sbjct: 164 KPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILE 223

[Close]
BLAST of Chy3G057400 vs. ExPASy Swiss-Prot
Match: O04348 (Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TPP1 PE=2 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 5.0e-17
Identity = 47/117 (40.17%), Postives = 68/117 (58.12%), Query Frame = 0 

Query: 31  AFLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDPT 90
           AF    V ++  S L E  SIPS+SMYPTL  GDR++ E  SY  R P ++DI+ F+ P 
Sbjct: 160 AFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPP 219

Query: 91  -----QQSGRREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLQERPTYTTKP 143
                 + G    ++ +KR+VA  GD VEV  G L+VN + ++E F+ E  +Y  +P
Sbjct: 220 ILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEP 276

[Close]
BLAST of Chy3G057400 vs. ExPASy Swiss-Prot
Match: Q9M9Z2 (Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TPP2 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-16
Identity = 49/114 (42.98%), Postives = 65/114 (57.02%), Query Frame = 0 

Query: 31  AFLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDP- 90
           AF    V L+  S L E  SIPS+SM PTL VGDR++ E  SY  R P ++DI+ F+ P 
Sbjct: 190 AFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAPP 249

Query: 91  -TQQSGRREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLQERPTYTTKP 143
              + G    ++ +KR+VA  GD VEVC G L VN   + E F+ E   Y  +P
Sbjct: 250 ILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEP 303

[Close]
BLAST of Chy3G057400 vs. ExPASy Swiss-Prot
Match: P73157 (Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=lepB2 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 8.8e-14
Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = 0 

Query: 43  SMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDPTQQSGRREENIVV 102
           + + E   IPSSSM PTL++ DR+++E  SY +R+P   +I+ F        +   +  +
Sbjct: 40  TFVAEARYIPSSSMEPTLQINDRLIIEKISYRLRDPERGEIVVFNPTDALKAKNFHDAFI 99

Query: 103 KRVVAKAGDTVEVCQGCLYVNGVAKDESFLQERPTYTTKPTLLESD 149
           KR++   GD V V QG +YVNG   DE+++   P Y   P  +  D
Sbjct: 100 KRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPAYEYGPVKVPDD 145

[Close]
BLAST of Chy3G057400 vs. ExPASy Swiss-Prot
Match: P72660 (Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=lepB1 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-11
Identity = 42/105 (40.00%), Postives = 55/105 (52.38%), Query Frame = 0 

Query: 36  LVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDP--TQQS 95
           ++ L+L   + E   IPS SM PTL  GDR++VE  SY    P + DII F  P   Q  
Sbjct: 25  VLALLLRFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQ 84

Query: 96  GRREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLQERPTY 139
           G       +KRV+A  G TVEV  G +Y +G    E ++ E P Y
Sbjct: 85  GYDLGQAFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQY 129

[Close]
BLAST of Chy3G057400 vs. ExPASy TrEMBL
Match: A0A0A0KIU5 (Peptidase_S26 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G382350 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.1e-70
Identity = 136/143 (95.10%), Postives = 136/143 (95.10%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMPFHSWGFPRWPGFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           MTFLRPFLFYSSLRWM FHSWGFPRWP FDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL
Sbjct: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSGRREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVETASYLIRNPSINDIITFRDPTQQS  REENIVVKRVVAKAGDTVEVCQGCL
Sbjct: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120

Query: 121 YVNGVAKDESFLQERPTYTTKPT 144
           YVNGVAKDESFL ERP YTTK T
Sbjct: 121 YVNGVAKDESFLLERPMYTTKST 143

[Close]
BLAST of Chy3G057400 vs. ExPASy TrEMBL
Match: A0A1S3CRY6 (chloroplast processing peptidase-like OS=Cucumis melo OX=3656 GN=LOC103504090 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 130/143 (90.91%), Postives = 136/143 (95.10%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMPFHSWGFPRWPGFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           M+FLRPFLFYSSLRWM FHSWGFPRWPGFD FLRF+VLLILWSMLLEIHSIPSSSMYPTL
Sbjct: 1   MSFLRPFLFYSSLRWMIFHSWGFPRWPGFDGFLRFIVLLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSGRREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVE ASY IRNPSINDIITF+DPTQQSG REENIVVKRVVAKAGDTVEV QGCL
Sbjct: 61  RVGDRILVEKASYFIRNPSINDIITFQDPTQQSGCREENIVVKRVVAKAGDTVEVFQGCL 120

Query: 121 YVNGVAKDESFLQERPTYTTKPT 144
           YVNG+A+DESFL+ERPTYTTK T
Sbjct: 121 YVNGIAQDESFLRERPTYTTKST 143

[Close]
BLAST of Chy3G057400 vs. ExPASy TrEMBL
Match: A0A6J1JS29 (chloroplast processing peptidase-like OS=Cucurbita maxima OX=3661 GN=LOC111487833 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 5.8e-61
Identity = 117/143 (81.82%), Postives = 127/143 (88.81%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMPFHSWGFPRWPGFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           M+FLRPF+ YS+LRWM   SWGFPRWPGFD  LR LV+LILWSM LEIH IPSSSMYPTL
Sbjct: 1   MSFLRPFMLYSTLRWMTCSSWGFPRWPGFDGLLRCLVVLILWSMYLEIHFIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSGRREENIVVKRVVAKAGDTVEVCQGCL 120
           R+GDRILVE  SY IRNPSI+DIITFRDPTQQSGRREEN+VVKRVVAKAGD VEVC+GCL
Sbjct: 61  RIGDRILVEKVSYYIRNPSIDDIITFRDPTQQSGRREENLVVKRVVAKAGDMVEVCEGCL 120

Query: 121 YVNGVAKDESFLQERPTYTTKPT 144
           YVNG+A+DE FL ERPTYTTK T
Sbjct: 121 YVNGIAQDERFLAERPTYTTKST 143

[Close]
BLAST of Chy3G057400 vs. ExPASy TrEMBL
Match: A0A6J1GPV1 (chloroplast processing peptidase-like OS=Cucurbita moschata OX=3662 GN=LOC111456402 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 7.6e-61
Identity = 118/143 (82.52%), Postives = 127/143 (88.81%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMPFHSWGFPRWPGFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           M+FLRPF+ YS+LRWM   SWGFPRWPGFD  LR LV+LILWSM LEIH IPSSSMYPTL
Sbjct: 1   MSFLRPFMLYSTLRWMTCLSWGFPRWPGFDGLLRCLVVLILWSMYLEIHFIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSGRREENIVVKRVVAKAGDTVEVCQGCL 120
           R+GDRILVE  SY IRNPSI+DIITFRDPTQQSGRREEN+VVKRVVAKAGD VEVC+GCL
Sbjct: 61  RIGDRILVEKVSYYIRNPSIDDIITFRDPTQQSGRREENLVVKRVVAKAGDMVEVCEGCL 120

Query: 121 YVNGVAKDESFLQERPTYTTKPT 144
           YVNGVA+DE FL ERPTYTTK T
Sbjct: 121 YVNGVAQDERFLAERPTYTTKST 143

[Close]
BLAST of Chy3G057400 vs. ExPASy TrEMBL
Match: A0A6J1CIF2 (chloroplast processing peptidase-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011778 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 6.4e-60
Identity = 115/143 (80.42%), Postives = 127/143 (88.81%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMPFHSWGFPRWPGFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           + FLRPF+ YSSLRWM   SWGFPRWPGFD   RFLV+LILWSMLLEIH IPSSSMYPTL
Sbjct: 3   LLFLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTL 62

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSGRREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVE ASY IRNP+I+DIITFRDPTQQSGRREENIVVKRVVA +GD VEVC+GCL
Sbjct: 63  RVGDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCL 122

Query: 121 YVNGVAKDESFLQERPTYTTKPT 144
           YVNG+A+ E+FL ++PTYTTK T
Sbjct: 123 YVNGIAQKENFLADQPTYTTKST 145

[Close]
BLAST of Chy3G057400 vs. NCBI nr
Match: XP_004149428.1 (chloroplast processing peptidase [Cucumis sativus] >KGN47696.1 hypothetical protein Csa_018302 [Cucumis sativus])

HSP 1 Score: 274 bits (701), Expect = 4.36e-91
Identity = 136/143 (95.10%), Postives = 136/143 (95.10%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMPFHSWGFPRWPGFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           MTFLRPFLFYSSLRWM FHSWGFPRWP FDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL
Sbjct: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSGRREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVETASYLIRNPSINDIITFRDPTQQS  REENIVVKRVVAKAGDTVEVCQGCL
Sbjct: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120

Query: 121 YVNGVAKDESFLQERPTYTTKPT 143
           YVNGVAKDESFL ERP YTTK T
Sbjct: 121 YVNGVAKDESFLLERPMYTTKST 143

[Close]
BLAST of Chy3G057400 vs. NCBI nr
Match: XP_008466751.1 (PREDICTED: chloroplast processing peptidase-like [Cucumis melo])

HSP 1 Score: 266 bits (679), Expect = 9.74e-88
Identity = 130/143 (90.91%), Postives = 136/143 (95.10%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMPFHSWGFPRWPGFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           M+FLRPFLFYSSLRWM FHSWGFPRWPGFD FLRF+VLLILWSMLLEIHSIPSSSMYPTL
Sbjct: 1   MSFLRPFLFYSSLRWMIFHSWGFPRWPGFDGFLRFIVLLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSGRREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVE ASY IRNPSINDIITF+DPTQQSG REENIVVKRVVAKAGDTVEV QGCL
Sbjct: 61  RVGDRILVEKASYFIRNPSINDIITFQDPTQQSGCREENIVVKRVVAKAGDTVEVFQGCL 120

Query: 121 YVNGVAKDESFLQERPTYTTKPT 143
           YVNG+A+DESFL+ERPTYTTK T
Sbjct: 121 YVNGIAQDESFLRERPTYTTKST 143

[Close]
BLAST of Chy3G057400 vs. NCBI nr
Match: XP_038885468.1 (chloroplast processing peptidase-like [Benincasa hispida])

HSP 1 Score: 256 bits (653), Expect = 8.53e-84
Identity = 127/143 (88.81%), Postives = 132/143 (92.31%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMPFHSWGFPRWPGFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           M+FLRPFL YSSLRWM   SWGFPR PGFD  LRFLV+LILWSMLLEIHSIPSSSMYPTL
Sbjct: 1   MSFLRPFLLYSSLRWMNCQSWGFPRLPGFDGLLRFLVVLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSGRREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVE ASY IRNPSI+DIITFRDPTQQSGRREENIVVKRVVAKAGDTVEVCQGCL
Sbjct: 61  RVGDRILVEKASYYIRNPSIDDIITFRDPTQQSGRREENIVVKRVVAKAGDTVEVCQGCL 120

Query: 121 YVNGVAKDESFLQERPTYTTKPT 143
           YVNG+A+DESFL ERPTYTTK T
Sbjct: 121 YVNGIAQDESFLAERPTYTTKST 143

[Close]
BLAST of Chy3G057400 vs. NCBI nr
Match: XP_023542845.1 (chloroplast processing peptidase-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243 bits (620), Expect = 2.34e-79
Identity = 118/143 (82.52%), Postives = 127/143 (88.81%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMPFHSWGFPRWPGFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           M+FLRPF+ YS+LRWM   SWGFPRWPGFD  LR LV+LILWSM LEIH IPSSSMYPTL
Sbjct: 1   MSFLRPFMLYSTLRWMTCLSWGFPRWPGFDGLLRCLVVLILWSMYLEIHFIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSGRREENIVVKRVVAKAGDTVEVCQGCL 120
           R+GDRILVE  SY IRNPSI+DIITFRDPTQQSGRREEN+VVKRVVAKAGD VEVC+GCL
Sbjct: 61  RIGDRILVEKVSYYIRNPSIDDIITFRDPTQQSGRREENLVVKRVVAKAGDMVEVCEGCL 120

Query: 121 YVNGVAKDESFLQERPTYTTKPT 143
           YVNGVA+DE FL ERPTYTTK T
Sbjct: 121 YVNGVAQDERFLAERPTYTTKST 143

[Close]
BLAST of Chy3G057400 vs. NCBI nr
Match: XP_022991150.1 (chloroplast processing peptidase-like [Cucurbita maxima])

HSP 1 Score: 243 bits (621), Expect = 6.52e-79
Identity = 117/143 (81.82%), Postives = 127/143 (88.81%), Query Frame = 0 

Query: 1   MTFLRPFLFYSSLRWMPFHSWGFPRWPGFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           M+FLRPF+ YS+LRWM   SWGFPRWPGFD  LR LV+LILWSM LEIH IPSSSMYPTL
Sbjct: 1   MSFLRPFMLYSTLRWMTCSSWGFPRWPGFDGLLRCLVVLILWSMYLEIHFIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSGRREENIVVKRVVAKAGDTVEVCQGCL 120
           R+GDRILVE  SY IRNPSI+DIITFRDPTQQSGRREEN+VVKRVVAKAGD VEVC+GCL
Sbjct: 61  RIGDRILVEKVSYYIRNPSIDDIITFRDPTQQSGRREENLVVKRVVAKAGDMVEVCEGCL 120

Query: 121 YVNGVAKDESFLQERPTYTTKPT 143
           YVNG+A+DE FL ERPTYTTK T
Sbjct: 121 YVNGIAQDERFLAERPTYTTKST 143

[Close]
BLAST of Chy3G057400 vs. TAIR 10
Match: AT3G24590.1 (plastidic type i signal peptidase 1 )

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-20
Identity = 55/128 (42.97%), Postives = 71/128 (55.47%), Query Frame = 0 

Query: 23  FPRWPGFDA------FLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIR 82
           FP W  F +      F+   V L     + E   IPS SMYPT  VGDR++ E  SY  R
Sbjct: 104 FPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFR 163

Query: 83  NPSINDIITFRDP--TQQSGRREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLQE 142
            P  NDI+ F+ P   Q+ G  + ++ +KR+VAK GD VEV  G L VNGVA++E F+ E
Sbjct: 164 KPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILE 223

[Close]
BLAST of Chy3G057400 vs. TAIR 10
Match: AT2G30440.1 (thylakoid processing peptide )

HSP 1 Score: 89.4 bits (220), Expect = 3.5e-18
Identity = 47/117 (40.17%), Postives = 68/117 (58.12%), Query Frame = 0 

Query: 31  AFLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDPT 90
           AF    V ++  S L E  SIPS+SMYPTL  GDR++ E  SY  R P ++DI+ F+ P 
Sbjct: 160 AFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPP 219

Query: 91  -----QQSGRREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLQERPTYTTKP 143
                 + G    ++ +KR+VA  GD VEV  G L+VN + ++E F+ E  +Y  +P
Sbjct: 220 ILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEP 276

[Close]
BLAST of Chy3G057400 vs. TAIR 10
Match: AT1G06870.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 87.8 bits (216), Expect = 1.0e-17
Identity = 49/114 (42.98%), Postives = 65/114 (57.02%), Query Frame = 0 

Query: 31  AFLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDP- 90
           AF    V L+  S L E  SIPS+SM PTL VGDR++ E  SY  R P ++DI+ F+ P 
Sbjct: 190 AFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAPP 249

Query: 91  -TQQSGRREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLQERPTYTTKP 143
              + G    ++ +KR+VA  GD VEVC G L VN   + E F+ E   Y  +P
Sbjct: 250 ILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEP 303

The following BLAST results are available for this feature:
BLAST of Chy3G057400 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8H0W11.8e-1942.97Chloroplast processing peptidase OS=Arabidopsis thaliana OX=3702 GN=PLSP1 PE=2 S... [more]
O043485.0e-1740.17Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana OX=370... [more]
Q9M9Z21.4e-1642.98Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thalia... [more]
P731578.8e-1434.91Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX... [more]
P726601.4e-1140.00Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX... [more]
BLAST of Chy3G057400 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIU53.1e-7095.10Peptidase_S26 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G3823... [more]
A0A1S3CRY61.1e-6790.91chloroplast processing peptidase-like OS=Cucumis melo OX=3656 GN=LOC103504090 PE... [more]
A0A6J1JS295.8e-6181.82chloroplast processing peptidase-like OS=Cucurbita maxima OX=3661 GN=LOC11148783... [more]
A0A6J1GPV17.6e-6182.52chloroplast processing peptidase-like OS=Cucurbita moschata OX=3662 GN=LOC111456... [more]
A0A6J1CIF26.4e-6080.42chloroplast processing peptidase-like isoform X1 OS=Momordica charantia OX=3673 ... [more]
BLAST of Chy3G057400 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149428.14.36e-9195.10chloroplast processing peptidase [Cucumis sativus] >KGN47696.1 hypothetical prot... [more]
XP_008466751.19.74e-8890.91PREDICTED: chloroplast processing peptidase-like [Cucumis melo][more]
XP_038885468.18.53e-8488.81chloroplast processing peptidase-like [Benincasa hispida][more]
XP_023542845.12.34e-7982.52chloroplast processing peptidase-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022991150.16.52e-7981.82chloroplast processing peptidase-like [Cucurbita maxima][more]
BLAST of Chy3G057400 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G24590.11.3e-2042.97plastidic type i signal peptidase 1 [more]
AT2G30440.13.5e-1840.17thylakoid processing peptide [more]
AT1G06870.11.0e-1742.98Peptidase S24/S26A/S26B/S26C family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 101..113
score: 51.28
coord: 44..60
score: 43.98
IPR000223Peptidase S26A, signal peptidase ITIGRFAMTIGR02227TIGR02227coord: 34..141
e-value: 1.4E-22
score: 78.3
IPR000223Peptidase S26A, signal peptidase IPANTHERPTHR43390SIGNAL PEPTIDASE Icoord: 5..142
NoneNo IPR availableGENE3D2.10.109.10Umud Fragment, subunit Acoord: 41..147
e-value: 4.1E-17
score: 64.3
NoneNo IPR availablePANTHERPTHR43390:SF10CHLOROPLAST PROCESSING PEPTIDASE-LIKEcoord: 5..142
IPR019533Peptidase S26PFAMPF10502Peptidase_S26coord: 32..139
e-value: 6.4E-23
score: 81.5
IPR019533Peptidase S26CDDcd06530S26_SPase_Icoord: 51..107
e-value: 1.89069E-16
score: 68.7663
IPR019756Peptidase S26A, signal peptidase I, serine active sitePROSITEPS00501SPASE_I_1coord: 53..60
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 44..150

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G057400.1Chy3G057400.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006465 signal peptide processing
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006508 proteolysis
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005887 integral component of plasma membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0008236 serine-type peptidase activity