Chy3G056970 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G056970
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Protein SPIRAL1-like 1
Location	chrH03: 9653070 .. 9653805 (+)
RNA-Seq Expression	Chy3G056970
Synteny	Chy3G056970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGGTCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGTGATGGAGATGCTCCTAATGCAGGTGCACCAAAAGGTGGCCGCCAAGCACCGCCGCCTTCAAATGAAGGGAAGACTGTATCCAAACCAGCAGTGTCTAAACCTGCTCCTACTGCTTCACCACCTGCAGATATTTCCAAGCAGATACCAGCTGGTATTCACAGTAGCTCATCAAACAACTATTTGAGGGCAGACGGTCAGAACACTGGCAATTTCATAACGGTATAGCTACCCTTTATGATTATTCTGCAATTTATTTGGTCTAATTTGACTGCTAGCATGTTGCCGATAATTGATACATATTTAATCTTGGATTAGGATCCATATTGCACCTATTTAGTTTAGCATACGATAAGGCAGTTACAGTTTGCTTGGATTAGATGTTTATTGCACCTATTTATCTAGTCTCGTCCTCCTCTTTCTACCTATCTTTGAATTGTACGATCCAAAAGCAGTAGCCAAACGGGCATGTGCTAAAAGAAGATTGTACTGTAACTGATCTTTTGCCAAAAATGGGAACCATGATATACCTTGATATGATATAATCAAAAAGGGGATTATAGTGATTGATTAGCTTTGTTTGTGGATGGTGCAGGATCGGCCTTCAACCAAGGTTCACGCCGCCCCGGGTGGGGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAGTGA

mRNA sequence

ATGGGGGGTCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGTGATGGAGATGCTCCTAATGCAGGTGCACCAAAAGGTGGCCGCCAAGCACCGCCGCCTTCAAATGAAGGGAAGACTGTATCCAAACCAGCAGTGTCTAAACCTGCTCCTACTGCTTCACCACCTGCAGATATTTCCAAGCAGATACCAGCTGGTATTCACAGTAGCTCATCAAACAACTATTTGAGGGCAGACGGTCAGAACACTGGCAATTTCATAACGGATCGGCCTTCAACCAAGGTTCACGCCGCCCCGGGTGGGGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAGTGA

Coding sequence (CDS)

ATGGGGGGTCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGTGATGGAGATGCTCCTAATGCAGGTGCACCAAAAGGTGGCCGCCAAGCACCGCCGCCTTCAAATGAAGGGAAGACTGTATCCAAACCAGCAGTGTCTAAACCTGCTCCTACTGCTTCACCACCTGCAGATATTTCCAAGCAGATACCAGCTGGTATTCACAGTAGCTCATCAAACAACTATTTGAGGGCAGACGGTCAGAACACTGGCAATTTCATAACGGATCGGCCTTCAACCAAGGTTCACGCCGCCCCGGGTGGGGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAGTGA

Protein sequence

MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK*

Homology

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BLAST of Chy3G056970 vs. ExPASy Swiss-Prot
Match: B3H4F1 (Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 8.5e-31
Identity = 76/116 (65.52%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASPPA 62
           GRGVS GGGQSSLGYLFG G+AP          AP PS+E   +S  A   P   A+   
Sbjct: 2   GRGVSVGGGQSSLGYLFGSGEAPKPAI----NNAPAPSSETLPIS--ADPSPKHVAAQTV 61

Query: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAG 119
           +++KQIPAGI+ SS+NNY+RADGQNTGNF+TDRPSTKVHAAPGGGSSLDYLFGG G
Sbjct: 62  NVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGG 111

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BLAST of Chy3G056970 vs. ExPASy Swiss-Prot
Match: Q2QQ99 (Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.0e-27
Identity = 73/115 (63.48%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPA-VSKPAPTASPP 62
           GRGVSSGGGQSSLGYLFG G+AP                  K+  KPA V KPAP++S  
Sbjct: 2   GRGVSSGGGQSSLGYLFGGGEAP------------------KSAEKPAPVQKPAPSSS-- 61

Query: 63  ADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
           A+  K+IPAGI SS +NNY+RA+GQN GNF+TDRPSTKV AAPGGGSSLDYLF G
Sbjct: 62  AEKLKEIPAGIQSSKANNYMRAEGQNCGNFLTDRPSTKVQAAPGGGSSLDYLFSG 96

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BLAST of Chy3G056970 vs. ExPASy Swiss-Prot
Match: Q9LE54 (Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.3e-27
Identity = 69/114 (60.53%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASPPA 62
           GRGVS+GGGQSSLGYLFG G+AP   A        P   E    + P  +     A+   
Sbjct: 2   GRGVSAGGGQSSLGYLFGSGEAPKLAAV----NKTPAETESSAHAPPTQA----AAANAV 61

Query: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
           D  KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+APGGGSSLDYLFGG
Sbjct: 62  DSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGG 107

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BLAST of Chy3G056970 vs. ExPASy Swiss-Prot
Match: Q7Y1L9 (Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-26
Identity = 74/115 (64.35%), Postives = 82/115 (71.30%), Query Frame = 0


Query: 4   RGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASP-PA 63
           RG S+GGGQSSLGYLFG  +AP   A      AP P+      +  AV+ PA   SP  A
Sbjct: 3   RGGSAGGGQSSLGYLFGGNEAPKPAAKPAPAAAPAPAPAPAPAA--AVAAPAEKPSPAKA 62

Query: 64  DISKQIPAGIHSS-SSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
           D +KQIPAGI  S S+NNY RADGQNTGNF+TDRPSTKVHAAPGGGSSL YLFGG
Sbjct: 63  DATKQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLGYLFGG 115

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BLAST of Chy3G056970 vs. ExPASy Swiss-Prot
Match: Q2R0W8 (Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0629400 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 9.1e-25
Identity = 69/116 (59.48%), Postives = 78/116 (67.24%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASPP- 62
           GRGVSSGGGQSSLGYLFG G+   A   K     P  + E +T   P        A+ P 
Sbjct: 4   GRGVSSGGGQSSLGYLFGGGETAPAAKAK-----PAAAAEKETTPAPVKKAAVAAAASPS 63

Query: 63  -ADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
            A+  K+IPAGI S+ +NNY RA GQN GNF+TDRPSTKVHAAPGGGSSL YLFGG
Sbjct: 64  AAEKMKEIPAGIQSTQANNYFRAQGQNCGNFLTDRPSTKVHAAPGGGSSLGYLFGG 114

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BLAST of Chy3G056970 vs. ExPASy TrEMBL
Match: A0A1S3BCR3 (protein SPIRAL1-like 1 OS=Cucumis melo OX=3656 GN=LOC103488465 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.6e-56
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPA TASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP 60

Query: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PADI+KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

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BLAST of Chy3G056970 vs. ExPASy TrEMBL
Match: A0A5A7VC71 (Protein SPIRAL1-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00750 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.6e-56
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPA TASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP 60

Query: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PADI+KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

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BLAST of Chy3G056970 vs. ExPASy TrEMBL
Match: A0A0A0KFN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G366520 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.9e-54
Identity = 115/120 (95.83%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KT+SKPAVSKPA TASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASP 60

Query: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

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BLAST of Chy3G056970 vs. ExPASy TrEMBL
Match: A0A6J1K972 (protein SPIRAL1-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111492241 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.7e-48
Identity = 107/118 (90.68%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASPPA 62
           GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PPSNEGK VSKPA SKPA TASPPA
Sbjct: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQ--APPSNEGKAVSKPAASKPAATASPPA 61

Query: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 121
           D +KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 62  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 117

[Close]

BLAST of Chy3G056970 vs. ExPASy TrEMBL
Match: A0A6J1HDG7 (protein SPIRAL1-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111462521 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.7e-48
Identity = 107/118 (90.68%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASPPA 62
           GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PPSNEGK VSKPA SKPA TASPPA
Sbjct: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQ--APPSNEGKAVSKPAASKPAATASPPA 61

Query: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 121
           D +KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 62  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 117

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BLAST of Chy3G056970 vs. NCBI nr
Match: XP_008445444.1 (PREDICTED: protein SPIRAL1-like 1 [Cucumis melo] >XP_008445446.1 PREDICTED: protein SPIRAL1-like 1 [Cucumis melo] >XP_008445447.1 PREDICTED: protein SPIRAL1-like 1 [Cucumis melo] >KAA0064770.1 protein SPIRAL1-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 228 bits (582), Expect = 3.35e-75
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPA TASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASP 60

Query: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PADI+KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

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BLAST of Chy3G056970 vs. NCBI nr
Match: XP_038886245.1 (protein SPIRAL1-like 1 [Benincasa hispida])

HSP 1 Score: 226 bits (575), Expect = 3.92e-74
Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP NEGKTVSKPAVSKPA TASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPLNEGKTVSKPAVSKPAATASP 60

Query: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PAD++KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADVTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of Chy3G056970 vs. NCBI nr
Match: XP_004144171.1 (protein SPIRAL1-like 1 [Cucumis sativus] >XP_004144172.1 protein SPIRAL1-like 1 [Cucumis sativus] >XP_031743708.1 protein SPIRAL1-like 1 [Cucumis sativus] >KGN47654.1 hypothetical protein Csa_018315 [Cucumis sativus])

HSP 1 Score: 223 bits (568), Expect = 4.58e-73
Identity = 115/120 (95.83%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASP 60
           MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KT+SKPAVSKPA TASP
Sbjct: 1   MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASP 60

Query: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 61  PADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of Chy3G056970 vs. NCBI nr
Match: XP_022961880.1 (protein SPIRAL1-like 2 [Cucurbita moschata] >XP_022997295.1 protein SPIRAL1-like 2 [Cucurbita maxima] >XP_023546068.1 protein SPIRAL1-like 2 [Cucurbita pepo subsp. pepo] >KAG6598640.1 Protein SPIRAL1-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029577.1 Protein SPIRAL1-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203 bits (516), Expect = 3.54e-65
Identity = 107/118 (90.68%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASPPA 62
           GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PPSNEGK VSKPA SKPA TASPPA
Sbjct: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQA--PPSNEGKAVSKPAASKPAATASPPA 61

Query: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120
           D +KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 62  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 117

[Close]

BLAST of Chy3G056970 vs. NCBI nr
Match: KAG6585249.1 (Protein SPIRAL1-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020170.1 Protein SPIRAL1-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194 bits (492), Expect = 2.38e-61
Identity = 107/129 (82.95%), Postives = 109/129 (84.50%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP-----------SNEGKTVSKPAV 62
           GRGVSSGGGQSSLGYLFG G++PNAGAPKGG QAP P           SNEGK VSKPA 
Sbjct: 2   GRGVSSGGGQSSLGYLFGSGESPNAGAPKGG-QAPAPAPAPAPAPAPRSNEGKPVSKPAA 61

Query: 63  SKPAPTASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120
           SKPA TASPP D  KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD
Sbjct: 62  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 121

[Close]

BLAST of Chy3G056970 vs. TAIR 10
Match: AT1G26355.1 (SPIRAL1-like1 )

HSP 1 Score: 134.4 bits (337), Expect = 6.0e-32
Identity = 76/116 (65.52%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASPPA 62
           GRGVS GGGQSSLGYLFG G+AP          AP PS+E   +S  A   P   A+   
Sbjct: 2   GRGVSVGGGQSSLGYLFGSGEAPKPAI----NNAPAPSSETLPIS--ADPSPKHVAAQTV 61

Query: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAG 119
           +++KQIPAGI+ SS+NNY+RADGQNTGNF+TDRPSTKVHAAPGGGSSLDYLFGG G
Sbjct: 62  NVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGG 111

[Close]

BLAST of Chy3G056970 vs. TAIR 10
Match: AT1G69230.1 (SPIRAL1-like2 )

HSP 1 Score: 122.1 bits (305), Expect = 3.1e-28
Identity = 69/114 (60.53%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASPPA 62
           GRGVS+GGGQSSLGYLFG G+AP   A        P   E    + P  +     A+   
Sbjct: 2   GRGVSAGGGQSSLGYLFGSGEAPKLAAV----NKTPAETESSAHAPPTQA----AAANAV 61

Query: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
           D  KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+APGGGSSLDYLFGG
Sbjct: 62  DSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGG 107

[Close]

BLAST of Chy3G056970 vs. TAIR 10
Match: AT1G69230.2 (SPIRAL1-like2 )

HSP 1 Score: 122.1 bits (305), Expect = 3.1e-28
Identity = 69/114 (60.53%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAPTASPPA 62
           GRGVS+GGGQSSLGYLFG G+AP   A        P   E    + P  +     A+   
Sbjct: 2   GRGVSAGGGQSSLGYLFGSGEAPKLAAV----NKTPAETESSAHAPPTQA----AAANAV 61

Query: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
           D  KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+APGGGSSLDYLFGG
Sbjct: 62  DSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGG 107

[Close]

BLAST of Chy3G056970 vs. TAIR 10
Match: AT2G03680.1 (spiral1 )

HSP 1 Score: 112.8 bits (281), Expect = 1.9e-25
Identity = 73/118 (61.86%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVS----KPAPTA 62
           GRG S GGGQSSL YLFG GDAP        R AP  SN G      AV+      A T+
Sbjct: 2   GRGNSCGGGQSSLDYLFG-GDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 61

Query: 63  SPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
             PA+++KQIPAGI  +  NNY RA+GQNTGNF+TDRPSTKVHAAPGGGSSLDYLF G
Sbjct: 62  VEPAELNKQIPAGI-KTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFTG 117

[Close]

BLAST of Chy3G056970 vs. TAIR 10
Match: AT2G03680.2 (spiral1 )

HSP 1 Score: 112.8 bits (281), Expect = 1.9e-25
Identity = 73/118 (61.86%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVS----KPAPTA 62
           GRG S GGGQSSL YLFG GDAP        R AP  SN G      AV+      A T+
Sbjct: 2   GRGNSCGGGQSSLDYLFG-GDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 61

Query: 63  SPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 117
             PA+++KQIPAGI  +  NNY RA+GQNTGNF+TDRPSTKVHAAPGGGSSLDYLF G
Sbjct: 62  VEPAELNKQIPAGI-KTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFTG 117

The following BLAST results are available for this feature:

BLAST of Chy3G056970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3H4F1	8.5e-31	65.52	Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1	[more]
Q2QQ99	2.0e-27	63.48	Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 ...	[more]
Q9LE54	4.3e-27	60.53	Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1	[more]
Q7Y1L9	2.2e-26	64.35	Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 ...	[more]
Q2R0W8	9.1e-25	59.48	Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0629400 ...	[more]

BLAST of Chy3G056970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BCR3	4.6e-56	98.33	protein SPIRAL1-like 1 OS=Cucumis melo OX=3656 GN=LOC103488465 PE=3 SV=1	[more]
A0A5A7VC71	4.6e-56	98.33	Protein SPIRAL1-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold8...	[more]
A0A0A0KFN2	1.9e-54	95.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G366520 PE=3 SV=1	[more]
A0A6J1K972	2.7e-48	90.68	protein SPIRAL1-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111492241 PE=3 SV=1	[more]
A0A6J1HDG7	2.7e-48	90.68	protein SPIRAL1-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111462521 PE=3 SV=1	[more]

BLAST of Chy3G056970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445444.1	3.35e-75	98.33	PREDICTED: protein SPIRAL1-like 1 [Cucumis melo] >XP_008445446.1 PREDICTED: prot...	[more]
XP_038886245.1	3.92e-74	96.67	protein SPIRAL1-like 1 [Benincasa hispida]	[more]
XP_004144171.1	4.58e-73	95.83	protein SPIRAL1-like 1 [Cucumis sativus] >XP_004144172.1 protein SPIRAL1-like 1 ...	[more]
XP_022961880.1	3.54e-65	90.68	protein SPIRAL1-like 2 [Cucurbita moschata] >XP_022997295.1 protein SPIRAL1-like...	[more]
KAG6585249.1	2.38e-61	82.95	Protein SPIRAL1-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020...	[more]

BLAST of Chy3G056970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26355.1	6.0e-32	65.52	SPIRAL1-like1	[more]
AT1G69230.1	3.1e-28	60.53	SPIRAL1-like2	[more]
AT1G69230.2	3.1e-28	60.53	SPIRAL1-like2	[more]
AT2G03680.1	1.9e-25	61.86	spiral1	[more]
AT2G03680.2	1.9e-25	61.86	spiral1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..95
None	No IPR available	PANTHER	PTHR33403:SF28	PROTEIN SPIRAL1-LIKE 2	coord: 3..118
IPR039613	Protein SPIRAL1-like	PANTHER	PTHR33403	SPR1	coord: 3..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G056970.1	Chy3G056970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043622	cortical microtubule organization
cellular_component	GO:0010005	cortical microtubule, transverse to long axis