Chy3G056440 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G056440
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Ankyrin repeat-containing protein ITN1-like
Location	chrH03: 9240597 .. 9241453 (+)
RNA-Seq Expression	Chy3G056440
Synteny	Chy3G056440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGTAGGGTTGAGGAAGATCAAGAAACTGCCACCATAGCAGCTGAAAATCAAACCTCATCAGAGAAGACCTGGCAGAAGGCAGACATAGAGCTTCTGATGGTAATCATAACATTCATTGGAACCATTTCTTTCCAAGCTGGAACAAACCCTCCTGGTGGCGTTTGGCAAGAAGGGTCGGTATACTTGAAACTACCATGCTTAAAATATCATTTCGACTTCTTATATTATTCATTATTTTTGAAAGTTTTGTTCAATTTTAAAGTTTTTTTTTTTCTAAATTGAAGTTGGTTGGATCATAATAGTCCTTTTTTATACTGAGAATGAGATGACAATATATTATTCTCAAATTTATAAACAACTGATCAATAGAGACATTTTTTTAAAAACGATAATAAGTGACCAAACCTATACTGCAATATTAACCATTTTAAAAATTTATTGAAATGAATGGTTTCGGATAAAAGGGAATTTGATGTATGTTTGGGGTTTGAAGGCCTGAAGCAGGGAAATCGATAATGGCCTCAAAAAACCCATCTCAGTTTGTTGTTTTCATCGTCGGAGTAACAGTAGCGATGGTATTATCTGCGGCGCAACTTCTGACGCTGATGAATGAGTTGCCTTACAACAAACTCTCGGATTCAAGGAACTTCATCTACTGTTCTTTGGGCATCACAATCACTGGATTGGGTTTCGCTTATTGGTCGTCGTTAACAGCTTTGACGCCGTCCTCCATGATACTCGAGGTCAGAATTGCGCTCATCACTGAACTTGCCATTGGTGTTGTCATAATGGCCATTATAATCTACGTACAGAAGAAAGACGTCTGCTCCAAGCTGAAATGTAACAAGTAG

mRNA sequence

ATGGCAAGTAGGGTTGAGGAAGATCAAGAAACTGCCACCATAGCAGCTGAAAATCAAACCTCATCAGAGAAGACCTGGCAGAAGGCAGACATAGAGCTTCTGATGGTAATCATAACATTCATTGGAACCATTTCTTTCCAAGCTGGAACAAACCCTCCTGGTGGCGTTTGGCAAGAAGGGCCTGAAGCAGGGAAATCGATAATGGCCTCAAAAAACCCATCTCAGTTTGTTGTTTTCATCGTCGGAGTAACAGTAGCGATGGTATTATCTGCGGCGCAACTTCTGACGCTGATGAATGAGTTGCCTTACAACAAACTCTCGGATTCAAGGAACTTCATCTACTGTTCTTTGGGCATCACAATCACTGGATTGGGTTTCGCTTATTGGTCGTCGTTAACAGCTTTGACGCCGTCCTCCATGATACTCGAGGTCAGAATTGCGCTCATCACTGAACTTGCCATTGGTGTTGTCATAATGGCCATTATAATCTACGTACAGAAGAAAGACGTCTGCTCCAAGCTGAAATGTAACAAGTAG

Coding sequence (CDS)

ATGGCAAGTAGGGTTGAGGAAGATCAAGAAACTGCCACCATAGCAGCTGAAAATCAAACCTCATCAGAGAAGACCTGGCAGAAGGCAGACATAGAGCTTCTGATGGTAATCATAACATTCATTGGAACCATTTCTTTCCAAGCTGGAACAAACCCTCCTGGTGGCGTTTGGCAAGAAGGGCCTGAAGCAGGGAAATCGATAATGGCCTCAAAAAACCCATCTCAGTTTGTTGTTTTCATCGTCGGAGTAACAGTAGCGATGGTATTATCTGCGGCGCAACTTCTGACGCTGATGAATGAGTTGCCTTACAACAAACTCTCGGATTCAAGGAACTTCATCTACTGTTCTTTGGGCATCACAATCACTGGATTGGGTTTCGCTTATTGGTCGTCGTTAACAGCTTTGACGCCGTCCTCCATGATACTCGAGGTCAGAATTGCGCTCATCACTGAACTTGCCATTGGTGTTGTCATAATGGCCATTATAATCTACGTACAGAAGAAAGACGTCTGCTCCAAGCTGAAATGTAACAAGTAG

Protein sequence

MASRVEEDQETATIAAENQTSSEKTWQKADIELLMVIITFIGTISFQAGTNPPGGVWQEGPEAGKSIMASKNPSQFVVFIVGVTVAMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGITITGLGFAYWSSLTALTPSSMILEVRIALITELAIGVVIMAIIIYVQKKDVCSKLKCNK*

Homology

[Close]

BLAST of Chy3G056440 vs. ExPASy TrEMBL
Match: A0A0A0KFJ5 (PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363010 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.0e-84
Identity = 170/178 (95.51%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 1   MASRVEEDQETATIAAENQTSSEKTWQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60
           MASRVEEDQETATIAAENQTSSEKT QKADIELLMVIITFIGTISFQAGTNPPGGVWQEG
Sbjct: 1   MASRVEEDQETATIAAENQTSSEKTLQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60

Query: 61  PEAGKSIMASKNPSQFVVFIVGVTVAMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT 120
           PEAGKSIMASKNPSQFVVFIVGVTV MVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT
Sbjct: 61  PEAGKSIMASKNPSQFVVFIVGVTVGMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT 120

Query: 121 ITGLGFAYWSSLTALTPSSMILEVRIALITELAIGVVIMAIIIYVQKKDVCSKLKCNK 179
           IT LGFAYWSSLTALTPSSMILEVRI LITEL+IGVVI+AII+Y+QKKDVCSKLKCNK
Sbjct: 121 ITALGFAYWSSLTALTPSSMILEVRIVLITELSIGVVIVAIIVYIQKKDVCSKLKCNK 178

[Close]

BLAST of Chy3G056440 vs. ExPASy TrEMBL
Match: A0A5A7VFP9 (Ankyrin repeat-containing protein ITN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00240 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.3e-72
Identity = 149/175 (85.14%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 1   MASRVEEDQETATIAAENQTSSEKTWQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60
           MASRVEED+ET TIAAENQTSSEK+WQK DIELLMVIITFIGTISFQAGTNPPGGVWQ+G
Sbjct: 1   MASRVEEDEET-TIAAENQTSSEKSWQKTDIELLMVIITFIGTISFQAGTNPPGGVWQDG 60

Query: 61  PEAGKSIMASKNPSQFVVFIVGVTVAMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT 120
            EAGKSIMASKNPSQF+VFIVGV+ AMVLSAAQL+TLMNELPYNKLSDSRNFIYCSLG  
Sbjct: 61  SEAGKSIMASKNPSQFLVFIVGVSTAMVLSAAQLMTLMNELPYNKLSDSRNFIYCSLGFI 120

Query: 121 ITGLGFAYWSSLTALTPSSMILEVRIALITELAIGVVIMAIIIYVQKKDVCSKLK 176
           IT LGFAY SS+TALTPSSMI EV+ AL+T LA+G V++AI+IY+QKKDVCSKLK
Sbjct: 121 ITALGFAYGSSVTALTPSSMIDEVKTALLTVLAVGAVVIAIVIYIQKKDVCSKLK 174

[Close]

BLAST of Chy3G056440 vs. ExPASy TrEMBL
Match: A0A1S4DVK4 (uncharacterized protein LOC103488514 OS=Cucumis melo OX=3656 GN=LOC103488514 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.5e-71
Identity = 148/175 (84.57%), Postives = 162/175 (92.57%), Query Frame = 0


Query: 1   MASRVEEDQETATIAAENQTSSEKTWQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60
           MASRV ED+ET TIAAENQTSSEK+WQK DIELLMVIITFIGTISFQAGTNPPGGVWQ+G
Sbjct: 1   MASRVGEDEET-TIAAENQTSSEKSWQKTDIELLMVIITFIGTISFQAGTNPPGGVWQDG 60

Query: 61  PEAGKSIMASKNPSQFVVFIVGVTVAMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT 120
            EAGKSIMASKNPSQF+VFIVGV+ AMVLSAAQL+TLMNELPYNKLSDSRNFIYCSLG  
Sbjct: 61  SEAGKSIMASKNPSQFLVFIVGVSTAMVLSAAQLMTLMNELPYNKLSDSRNFIYCSLGFI 120

Query: 121 ITGLGFAYWSSLTALTPSSMILEVRIALITELAIGVVIMAIIIYVQKKDVCSKLK 176
           IT LGFAY SS+TALTPSSMI EV+ AL+T LA+G V++AI+IY+QKKDVCSKLK
Sbjct: 121 ITALGFAYGSSVTALTPSSMIDEVKTALLTVLAVGAVVIAIVIYIQKKDVCSKLK 174

[Close]

BLAST of Chy3G056440 vs. ExPASy TrEMBL
Match: A0A6J1I8P6 (uncharacterized protein LOC111471995 OS=Cucurbita maxima OX=3661 GN=LOC111471995 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.5e-26
Identity = 73/172 (42.44%), Postives = 107/172 (62.21%), Query Frame = 0


Query: 1   MASRVEEDQETATIAAENQTSSEKTWQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60
           MASR+EE+            + E+TWQK D E L+V++TF+ T++FQAG +PPGGVWQ+ 
Sbjct: 1   MASRLEEEAPNQIGNGREDQNKEETWQKRDREYLLVVVTFMATVAFQAGVSPPGGVWQQD 60

Query: 61  PE-----AGKSIMASKNPSQFVVFIVGVTVAMVLSAAQLLTLMNELPYNKLSDSRNFIYC 120
            +     AG SIMA+K P++F  FIVGVTV M++S  Q + L+NELP +  S SR ++Y 
Sbjct: 61  DKNSSIVAGTSIMATKFPAEFTTFIVGVTVCMIVSMLQFIVLLNELPSDTPSLSRKYLYY 120

Query: 121 SLGITITGLGFAYWSSLTALTPSSMILEVRIALITELAIGVVIMAIIIYVQK 168
           +L   +  +  +Y SS+ A TP  MI      L+  +  GVV++ I ++ QK
Sbjct: 121 TLFFALGSMLSSYVSSVKAYTPEPMIPRAVTVLVFSIGSGVVLVGISLFKQK 172

[Close]

BLAST of Chy3G056440 vs. ExPASy TrEMBL
Match: A0A1S4DVA8 (uncharacterized protein LOC107990705 OS=Cucumis melo OX=3656 GN=LOC107990705 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.7e-25
Identity = 74/174 (42.53%), Postives = 107/174 (61.49%), Query Frame = 0


Query: 5   VEEDQETATIAAENQ-TSSEKTWQKADIELLMVIITFIGTISFQAGTNPPGGVWQE---- 64
           +E DQ       ENQ    +K  +  D + LMV  TFI  ++FQAGTNPPGGVWQ+    
Sbjct: 13  IETDQTINEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNSP 72

Query: 65  GPEAGKSIMASKNPSQFVVFIVGVTVAMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGI 124
             EAGKSIMA+K+PS F+ F+ GVTV    SA Q + L+ +      S S++FIY ++G 
Sbjct: 73  NYEAGKSIMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKSSEKSWSVSKSFIYFTMGS 132

Query: 125 TITGLGFAYWSSLTALTPSSMILEVRIALITELAIGVVIMAIIIYVQKKDVCSK 174
            I+ +  AYWS++ ALTP + +  V + L T L + VV++ I +Y++KK + S+
Sbjct: 133 GISAIVVAYWSAIKALTPEAQMSHVIVMLKTTLVLSVVVLPISMYIEKKRLASR 186

[Close]

BLAST of Chy3G056440 vs. NCBI nr
Match: KGN47594.1 (hypothetical protein Csa_019055 [Cucumis sativus])

HSP 1 Score: 321 bits (822), Expect = 6.48e-110
Identity = 170/178 (95.51%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 1   MASRVEEDQETATIAAENQTSSEKTWQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60
           MASRVEEDQETATIAAENQTSSEKT QKADIELLMVIITFIGTISFQAGTNPPGGVWQEG
Sbjct: 1   MASRVEEDQETATIAAENQTSSEKTLQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60

Query: 61  PEAGKSIMASKNPSQFVVFIVGVTVAMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT 120
           PEAGKSIMASKNPSQFVVFIVGVTV MVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT
Sbjct: 61  PEAGKSIMASKNPSQFVVFIVGVTVGMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT 120

Query: 121 ITGLGFAYWSSLTALTPSSMILEVRIALITELAIGVVIMAIIIYVQKKDVCSKLKCNK 178
           IT LGFAYWSSLTALTPSSMILEVRI LITEL+IGVVI+AII+Y+QKKDVCSKLKCNK
Sbjct: 121 ITALGFAYWSSLTALTPSSMILEVRIVLITELSIGVVIVAIIVYIQKKDVCSKLKCNK 178

[Close]

BLAST of Chy3G056440 vs. NCBI nr
Match: KAA0064715.1 (ankyrin repeat-containing protein ITN1-like [Cucumis melo var. makuwa] >TYK00734.1 ankyrin repeat-containing protein ITN1-like [Cucumis melo var. makuwa])

HSP 1 Score: 280 bits (717), Expect = 5.67e-94
Identity = 149/175 (85.14%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 1   MASRVEEDQETATIAAENQTSSEKTWQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60
           MASRVEED+ET TIAAENQTSSEK+WQK DIELLMVIITFIGTISFQAGTNPPGGVWQ+G
Sbjct: 1   MASRVEEDEET-TIAAENQTSSEKSWQKTDIELLMVIITFIGTISFQAGTNPPGGVWQDG 60

Query: 61  PEAGKSIMASKNPSQFVVFIVGVTVAMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT 120
            EAGKSIMASKNPSQF+VFIVGV+ AMVLSAAQL+TLMNELPYNKLSDSRNFIYCSLG  
Sbjct: 61  SEAGKSIMASKNPSQFLVFIVGVSTAMVLSAAQLMTLMNELPYNKLSDSRNFIYCSLGFI 120

Query: 121 ITGLGFAYWSSLTALTPSSMILEVRIALITELAIGVVIMAIIIYVQKKDVCSKLK 175
           IT LGFAY SS+TALTPSSMI EV+ AL+T LA+G V++AI+IY+QKKDVCSKLK
Sbjct: 121 ITALGFAYGSSVTALTPSSMIDEVKTALLTVLAVGAVVIAIVIYIQKKDVCSKLK 174

[Close]

BLAST of Chy3G056440 vs. NCBI nr
Match: XP_016900016.1 (PREDICTED: uncharacterized protein LOC103488514 [Cucumis melo])

HSP 1 Score: 278 bits (710), Expect = 6.61e-93
Identity = 148/175 (84.57%), Postives = 162/175 (92.57%), Query Frame = 0


Query: 1   MASRVEEDQETATIAAENQTSSEKTWQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60
           MASRV ED+ET TIAAENQTSSEK+WQK DIELLMVIITFIGTISFQAGTNPPGGVWQ+G
Sbjct: 1   MASRVGEDEET-TIAAENQTSSEKSWQKTDIELLMVIITFIGTISFQAGTNPPGGVWQDG 60

Query: 61  PEAGKSIMASKNPSQFVVFIVGVTVAMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT 120
            EAGKSIMASKNPSQF+VFIVGV+ AMVLSAAQL+TLMNELPYNKLSDSRNFIYCSLG  
Sbjct: 61  SEAGKSIMASKNPSQFLVFIVGVSTAMVLSAAQLMTLMNELPYNKLSDSRNFIYCSLGFI 120

Query: 121 ITGLGFAYWSSLTALTPSSMILEVRIALITELAIGVVIMAIIIYVQKKDVCSKLK 175
           IT LGFAY SS+TALTPSSMI EV+ AL+T LA+G V++AI+IY+QKKDVCSKLK
Sbjct: 121 ITALGFAYGSSVTALTPSSMIDEVKTALLTVLAVGAVVIAIVIYIQKKDVCSKLK 174

[Close]

BLAST of Chy3G056440 vs. NCBI nr
Match: XP_038884849.1 (uncharacterized protein LOC120075488 isoform X1 [Benincasa hispida])

HSP 1 Score: 144 bits (364), Expect = 2.64e-40
Identity = 87/167 (52.10%), Postives = 116/167 (69.46%), Query Frame = 0


Query: 1   MASRVEEDQETATIAAENQTSSEKTWQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60
           MASR+  D+E  + AAE+QTS EK+WQK+D E LM++ITF+ TI   AG   P    +  
Sbjct: 1   MASRL--DEEAPSPAAEDQTS-EKSWQKSDREFLMIMITFVATI---AGRTLPVVFGKTI 60

Query: 61  PEAGKSIMASKNPSQFVVFIVGVTVAMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT 120
           P AGKSIMASK+PSQFV FI GVT AMV+S  Q+  L+N LPYNK S SRNF+Y ++GI 
Sbjct: 61  PTAGKSIMASKHPSQFVAFIAGVTTAMVVSVMQIFVLINGLPYNKFSVSRNFLYFTMGIA 120

Query: 121 ITGLGFAYWSSLTALTPSSMILEVRIALITELAIGVVIMAIIIYVQK 167
           I+ +G AYW+S+T LT    + ++R  L+     GVV +AI++ +QK
Sbjct: 121 ISSMGTAYWTSVTPLTLPLQLPQIRTTLLINFVTGVVGLAILLCLQK 161

[Close]

BLAST of Chy3G056440 vs. NCBI nr
Match: XP_022973456.1 (uncharacterized protein LOC111471995 [Cucurbita maxima])

HSP 1 Score: 127 bits (320), Expect = 1.41e-33
Identity = 73/172 (42.44%), Postives = 107/172 (62.21%), Query Frame = 0


Query: 1   MASRVEEDQETATIAAENQTSSEKTWQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60
           MASR+EE+            + E+TWQK D E L+V++TF+ T++FQAG +PPGGVWQ+ 
Sbjct: 1   MASRLEEEAPNQIGNGREDQNKEETWQKRDREYLLVVVTFMATVAFQAGVSPPGGVWQQD 60

Query: 61  PE-----AGKSIMASKNPSQFVVFIVGVTVAMVLSAAQLLTLMNELPYNKLSDSRNFIYC 120
            +     AG SIMA+K P++F  FIVGVTV M++S  Q + L+NELP +  S SR ++Y 
Sbjct: 61  DKNSSIVAGTSIMATKFPAEFTTFIVGVTVCMIVSMLQFIVLLNELPSDTPSLSRKYLYY 120

Query: 121 SLGITITGLGFAYWSSLTALTPSSMILEVRIALITELAIGVVIMAIIIYVQK 167
           +L   +  +  +Y SS+ A TP  MI      L+  +  GVV++ I ++ QK
Sbjct: 121 TLFFALGSMLSSYVSSVKAYTPEPMIPRAVTVLVFSIGSGVVLVGISLFKQK 172

[Close]

BLAST of Chy3G056440 vs. TAIR 10
Match: AT1G34050.1 (Ankyrin repeat family protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-07
Identity = 31/107 (28.97%), Postives = 57/107 (53.27%), Query Frame = 0


Query: 34  LMVIITFIGTISFQAGTNPPGGVWQEGPEAGKSIMASKNPSQFVVFIVGVTVAMVLSAAQ 93
           + ++   I +++F  G NPPGGV+QEGP  GKS   +     F VF +   +A+  S   
Sbjct: 399 ITIVAVLIASVAFTCGINPPGGVYQEGPYKGKS--TAGRTLAFQVFSISNNIALFTSLCI 458

Query: 94  LLTLMNELPYNKLSDSRNFIYCS---LGITITGLGFAYWSSLTALTP 138
           ++ L++ +PY +    +NF+  +   L + +  +  AY S+ + + P
Sbjct: 459 VILLVSIIPY-RTRPLKNFLKLTHRILWVAVASMALAYVSAASIIIP 502

[Close]

BLAST of Chy3G056440 vs. TAIR 10
Match: AT2G24600.3 (Ankyrin repeat family protein )

HSP 1 Score: 52.8 bits (125), Expect = 3.4e-07
Identity = 24/72 (33.33%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 34  LMVIITFIGTISFQAGTNPPGGVWQEGPEAGKSIMASKNPSQFVVFIVGVTVAMVLSAAQ 93
           + ++   I ++S+  G NPPGGV+Q+GP  GKS++   N + F VF +   +A+  S   
Sbjct: 408 IAIVAVLIASVSYAGGINPPGGVYQDGPWKGKSLVG--NTAAFKVFAICNNIALFTSLCI 467

Query: 94  LLTLMNELPYNK 106
           ++ L++ +PY +
Sbjct: 468 VILLVSIIPYQR 477

[Close]

BLAST of Chy3G056440 vs. TAIR 10
Match: AT2G24600.4 (Ankyrin repeat family protein )

HSP 1 Score: 52.8 bits (125), Expect = 3.4e-07
Identity = 24/72 (33.33%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 34  LMVIITFIGTISFQAGTNPPGGVWQEGPEAGKSIMASKNPSQFVVFIVGVTVAMVLSAAQ 93
           + ++   I ++S+  G NPPGGV+Q+GP  GKS++   N + F VF +   +A+  S   
Sbjct: 408 IAIVAVLIASVSYAGGINPPGGVYQDGPWKGKSLVG--NTAAFKVFAICNNIALFTSLCI 467

Query: 94  LLTLMNELPYNK 106
           ++ L++ +PY +
Sbjct: 468 VILLVSIIPYQR 477

[Close]

BLAST of Chy3G056440 vs. TAIR 10
Match: AT1G10340.1 (Ankyrin repeat family protein )

HSP 1 Score: 51.2 bits (121), Expect = 9.9e-07
Identity = 28/105 (26.67%), Postives = 55/105 (52.38%), Query Frame = 0


Query: 34  LMVIITFIGTISFQAGTNPPGGVWQEGPEAGKSIMASKNPSQFVVFIVGVTVAMVLSAAQ 93
           + ++   I ++++  G NPPGGV+Q+GP  GKS++     + F VF +   +A+  S   
Sbjct: 408 IAIVAVLIASVAYAGGINPPGGVYQDGPWRGKSLVG--KTTAFKVFAICNNIALFTSLGI 467

Query: 94  LLTLMNELPYNK------LSDSRNFIYCSLGITITGLGFAYWSSL 133
           ++ L++ +PY +      L  +   ++ S+G   T    A W ++
Sbjct: 468 VILLVSIIPYKRKPLKRLLVATHRMMWVSVGFMATAYIAASWVTI 510

[Close]

BLAST of Chy3G056440 vs. TAIR 10
Match: AT1G10340.2 (Ankyrin repeat family protein )

HSP 1 Score: 51.2 bits (121), Expect = 9.9e-07
Identity = 28/105 (26.67%), Postives = 55/105 (52.38%), Query Frame = 0


Query: 34  LMVIITFIGTISFQAGTNPPGGVWQEGPEAGKSIMASKNPSQFVVFIVGVTVAMVLSAAQ 93
           + ++   I ++++  G NPPGGV+Q+GP  GKS++     + F VF +   +A+  S   
Sbjct: 404 IAIVAVLIASVAYAGGINPPGGVYQDGPWRGKSLVG--KTTAFKVFAICNNIALFTSLGI 463

Query: 94  LLTLMNELPYNK------LSDSRNFIYCSLGITITGLGFAYWSSL 133
           ++ L++ +PY +      L  +   ++ S+G   T    A W ++
Sbjct: 464 VILLVSIIPYKRKPLKRLLVATHRMMWVSVGFMATAYIAASWVTI 506

The following BLAST results are available for this feature:

BLAST of Chy3G056440 vs.


Match Name	E-value	Identity	Description

BLAST of Chy3G056440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFJ5	2.0e-84	95.51	PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363010 PE=4 SV...	[more]
A0A5A7VFP9	2.3e-72	85.14	Ankyrin repeat-containing protein ITN1-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DVK4	1.5e-71	84.57	uncharacterized protein LOC103488514 OS=Cucumis melo OX=3656 GN=LOC103488514 PE=...	[more]
A0A6J1I8P6	2.5e-26	42.44	uncharacterized protein LOC111471995 OS=Cucurbita maxima OX=3661 GN=LOC111471995...	[more]
A0A1S4DVA8	3.7e-25	42.53	uncharacterized protein LOC107990705 OS=Cucumis melo OX=3656 GN=LOC107990705 PE=...	[more]

BLAST of Chy3G056440 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47594.1	6.48e-110	95.51	hypothetical protein Csa_019055 [Cucumis sativus]	[more]
KAA0064715.1	5.67e-94	85.14	ankyrin repeat-containing protein ITN1-like [Cucumis melo var. makuwa] >TYK00734...	[more]
XP_016900016.1	6.61e-93	84.57	PREDICTED: uncharacterized protein LOC103488514 [Cucumis melo]	[more]
XP_038884849.1	2.64e-40	52.10	uncharacterized protein LOC120075488 isoform X1 [Benincasa hispida]	[more]
XP_022973456.1	1.41e-33	42.44	uncharacterized protein LOC111471995 [Cucurbita maxima]	[more]

BLAST of Chy3G056440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G34050.1	1.5e-07	28.97	Ankyrin repeat family protein	[more]
AT2G24600.3	3.4e-07	33.33	Ankyrin repeat family protein	[more]
AT2G24600.4	3.4e-07	33.33	Ankyrin repeat family protein	[more]
AT1G10340.1	9.9e-07	26.67	Ankyrin repeat family protein	[more]
AT1G10340.2	9.9e-07	26.67	Ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026961	PGG domain	PFAM	PF13962	PGG	coord: 25..133 e-value: 1.5E-19 score: 69.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G056440.1	Chy3G056440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane