Chy3G056150 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGATTACGAGAACAAGAAGGTCGAGGAGGGAGTTCAAGAGGGTGGTGTCGAGGCCACGGATCGTGGGTTGTTTGATTTCTTGGGGAAGAAGAAAGAGGAAGAGCAGGCCGAGAAGCCCCCTGTTCATGAGGAGGAGGTGGTTGTAATTACTGAGCAGATGGAGAAAGTTGAAGTTTCTGAACCTTCTCATAAGGTTGAACAAGAAGAAGAGAAGAAGCCTAGTCTCTTGGAGAAACTCACCCGATCCGATAGCAGCTCTAGCTCTGTAAGTTTCATTTTTTCTTCATACTGACTCTGTTTAGAATCACTTTCTTATCATGCTTTTAACCATTTAAAAAGTCATTTCAAATAGTTTGTTTTTATATCGCCTGAATTCTTCGATTATTGTGAGCTAAGTAGCACAAAATTTGATGTTGAATTGTGCGAAAGATTTTATATTGATAATGCTGGATAATACTTGTCATCGTCGTGTAATTTAACAAAATTTTCATTTATTGTATCGAGTGGGAAAATATCTTTTATAACTCATTTTCTGAAATATTTTAATTTGCTTTTCGATTGTAAAGAGGGGCATGATCATAAAAATAGGGACTTAGACAATCTGAATAATTTGAACATCTTGATTCATCTCAGTATTGATTTATTTTTCATTTGTTTCTTAAATTTACTTTGCACAATCCAAGTAATTGGCAATTATCTAAAATTTATTGTGTCATATATATATTTGGGGTATGTGTGGAATGATAATTTCAAGTGTTTAAACTGACTTCGGGGTATGATTTAACAGTCAAGCGATGAGGAGGAAGGAGAAGACGGAGAGAAGAAAAAGAAGAAGAAGAAGGGATTGAAAGAGAAGTTGAAGGAGAAGCTAGGAGGAGGAGAAGAGGAAAAGAAGGAAGAAGAAGCAAAAAAGCACGAACACGAACACGAAGCAGTGCCCATCCCAGTGGAGAAGGTGGACGAGGCAGCACATCCAGAGGAAAAGAAAGGGTTCCTAGACAAGATCAAGGAGAAGCTTCCAGGCCACAGCAAGAAGCCAGAGGAAGCTCCAGAAGCGCCGGCCCCGTGCGTCACCGAGGCTGCAGCTCCTCCTCATCATCATGAAGAAGATCAAGGAAAAGAAAAGAAGGGATTTTTGGAGAAAATAAAGGAGAAACTCCCAGGGTATCACGCTAAGGAGGATCAAGAGAAGCACAAGGAGGAGGCAGCTTCTCATTGA ATGGCGGATTACGAGAACAAGAAGGTCGAGGAGGGAGTTCAAGAGGGTGGTGTCGAGGCCACGGATCGTGGGTTGTTTGATTTCTTGGGGAAGAAGAAAGAGGAAGAGCAGGCCGAGAAGCCCCCTGTTCATGAGGAGGAGGTGGTTGTAATTACTGAGCAGATGGAGAAAGTTGAAGTTTCTGAACCTTCTCATAAGGTTGAACAAGAAGAAGAGAAGAAGCCTAGTCTCTTGGAGAAACTCACCCGATCCGATAGCAGCTCTAGCTCTGTGGACGAGGCAGCACATCCAGAGGAAAAGAAAGGGTTCCTAGACAAGATCAAGGAGAAGCTTCCAGGCCACAGCAAGAAGCCAGAGGAAGCTCCAGAAGCGCCGGCCCCGTGCGTCACCGAGGCTGCAGCTCCTCCTCATCATCATGAAGAAGATCAAGGAAAAGAAAAGAAGGGATTTTTGGAGAAAATAAAGGAGAAACTCCCAGGGTATCACGCTAAGGAGGATCAAGAGAAGCACAAGGAGGAGGCAGCTTCTCATTGA ATGGCGGATTACGAGAACAAGAAGGTCGAGGAGGGAGTTCAAGAGGGTGGTGTCGAGGCCACGGATCGTGGGTTGTTTGATTTCTTGGGGAAGAAGAAAGAGGAAGAGCAGGCCGAGAAGCCCCCTGTTCATGAGGAGGAGGTGGTTGTAATTACTGAGCAGATGGAGAAAGTTGAAGTTTCTGAACCTTCTCATAAGGTTGAACAAGAAGAAGAGAAGAAGCCTAGTCTCTTGGAGAAACTCACCCGATCCGATAGCAGCTCTAGCTCTGTGGACGAGGCAGCACATCCAGAGGAAAAGAAAGGGTTCCTAGACAAGATCAAGGAGAAGCTTCCAGGCCACAGCAAGAAGCCAGAGGAAGCTCCAGAAGCGCCGGCCCCGTGCGTCACCGAGGCTGCAGCTCCTCCTCATCATCATGAAGAAGATCAAGGAAAAGAAAAGAAGGGATTTTTGGAGAAAATAAAGGAGAAACTCCCAGGGTATCACGCTAAGGAGGATCAAGAGAAGCACAAGGAGGAGGCAGCTTCTCATTGA MADYENKKVEEGVQEGGVEATDRGLFDFLGKKKEEEQAEKPPVHEEEVVVITEQMEKVEVSEPSHKVEQEEEKKPSLLEKLTRSDSSSSSVDEAAHPEEKKGFLDKIKEKLPGHSKKPEEAPEAPAPCVTEAAAPPHHHEEDQGKEKKGFLEKIKEKLPGYHAKEDQEKHKEEAASH* Homology
BLAST of Chy3G056150 vs. ExPASy Swiss-Prot
Match: P42763 (Dehydrin ERD14 OS=Arabidopsis thaliana OX=3702 GN=ERD14 PE=1 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 9.6e-23 Identity = 83/191 (43.46%), Postives = 103/191 (53.93%), Query Frame = 0
BLAST of Chy3G056150 vs. ExPASy Swiss-Prot
Match: Q9XJ56 (Phosphoprotein ECPP44 OS=Daucus carota OX=4039 GN=ECPP44 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.9e-19 Identity = 88/203 (43.35%), Postives = 106/203 (52.22%), Query Frame = 0
BLAST of Chy3G056150 vs. ExPASy Swiss-Prot
Match: P31168 (Dehydrin COR47 OS=Arabidopsis thaliana OX=3702 GN=COR47 PE=1 SV=2) HSP 1 Score: 89.7 bits (221), Expect = 3.5e-17 Identity = 74/182 (40.66%), Postives = 102/182 (56.04%), Query Frame = 0
BLAST of Chy3G056150 vs. ExPASy Swiss-Prot
Match: Q6ESR4 (Dehydrin DHN1 OS=Oryza sativa subsp. japonica OX=39947 GN=DHN1 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 5.1e-16 Identity = 96/231 (41.56%), Postives = 110/231 (47.62%), Query Frame = 0
BLAST of Chy3G056150 vs. ExPASy Swiss-Prot
Match: P46524 (Dehydrin COR410 OS=Triticum aestivum OX=4565 GN=COR410 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.6e-14 Identity = 80/188 (42.55%), Postives = 92/188 (48.94%), Query Frame = 0
BLAST of Chy3G056150 vs. ExPASy TrEMBL
Match: A0A5A7T8B9 (Phosphoprotein ECPP44-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold119G00330 PE=3 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 4.1e-77 Identity = 166/187 (88.77%), Postives = 172/187 (91.98%), Query Frame = 0
BLAST of Chy3G056150 vs. ExPASy TrEMBL
Match: A0A0A0KDH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358710 PE=3 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 9.1e-77 Identity = 172/236 (72.88%), Postives = 175/236 (74.15%), Query Frame = 0
BLAST of Chy3G056150 vs. ExPASy TrEMBL
Match: A0A1S3CML2 (phosphoprotein ECPP44-like OS=Cucumis melo OX=3656 GN=LOC103502642 PE=3 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 8.8e-72 Identity = 167/237 (70.46%), Postives = 172/237 (72.57%), Query Frame = 0
BLAST of Chy3G056150 vs. ExPASy TrEMBL
Match: A0A6J1KBQ2 (dehydrin ERD14-like OS=Cucurbita maxima OX=3661 GN=LOC111494016 PE=3 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 1.2e-47 Identity = 134/228 (58.77%), Postives = 145/228 (63.60%), Query Frame = 0
BLAST of Chy3G056150 vs. ExPASy TrEMBL
Match: A0A6J1G409 (dehydrin ERD14-like OS=Cucurbita moschata OX=3662 GN=LOC111450538 PE=3 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 1.3e-46 Identity = 133/228 (58.33%), Postives = 145/228 (63.60%), Query Frame = 0
BLAST of Chy3G056150 vs. NCBI nr
Match: KAA0038466.1 (phosphoprotein ECPP44-like [Cucumis melo var. makuwa]) HSP 1 Score: 297 bits (761), Expect = 1.69e-100 Identity = 166/187 (88.77%), Postives = 172/187 (91.98%), Query Frame = 0
BLAST of Chy3G056150 vs. NCBI nr
Match: XP_011657353.1 (dehydrin DHN1 [Cucumis sativus] >KGN47558.1 hypothetical protein Csa_018992 [Cucumis sativus]) HSP 1 Score: 296 bits (758), Expect = 2.60e-99 Identity = 172/236 (72.88%), Postives = 175/236 (74.15%), Query Frame = 0
BLAST of Chy3G056150 vs. NCBI nr
Match: XP_008464882.1 (PREDICTED: phosphoprotein ECPP44-like [Cucumis melo]) HSP 1 Score: 280 bits (715), Expect = 9.41e-93 Identity = 167/237 (70.46%), Postives = 172/237 (72.57%), Query Frame = 0
BLAST of Chy3G056150 vs. NCBI nr
Match: XP_038885501.1 (phosphoprotein ECPP44-like [Benincasa hispida]) HSP 1 Score: 229 bits (585), Expect = 4.18e-73 Identity = 148/236 (62.71%), Postives = 155/236 (65.68%), Query Frame = 0
BLAST of Chy3G056150 vs. NCBI nr
Match: XP_022999767.1 (dehydrin ERD14-like [Cucurbita maxima]) HSP 1 Score: 200 bits (509), Expect = 1.15e-61 Identity = 135/228 (59.21%), Postives = 146/228 (64.04%), Query Frame = 0
BLAST of Chy3G056150 vs. TAIR 10
Match: AT1G76180.1 (Dehydrin family protein ) HSP 1 Score: 108.2 bits (269), Expect = 6.8e-24 Identity = 83/191 (43.46%), Postives = 103/191 (53.93%), Query Frame = 0
BLAST of Chy3G056150 vs. TAIR 10
Match: AT1G76180.2 (Dehydrin family protein ) HSP 1 Score: 108.2 bits (269), Expect = 6.8e-24 Identity = 83/191 (43.46%), Postives = 103/191 (53.93%), Query Frame = 0
BLAST of Chy3G056150 vs. TAIR 10
Match: AT1G20440.1 (cold-regulated 47 ) HSP 1 Score: 89.7 bits (221), Expect = 2.5e-18 Identity = 74/182 (40.66%), Postives = 102/182 (56.04%), Query Frame = 0
BLAST of Chy3G056150 vs. TAIR 10
Match: AT1G20450.2 (Dehydrin family protein ) HSP 1 Score: 88.2 bits (217), Expect = 7.3e-18 Identity = 86/237 (36.29%), Postives = 105/237 (44.30%), Query Frame = 0
BLAST of Chy3G056150 vs. TAIR 10
Match: AT1G20450.1 (Dehydrin family protein ) HSP 1 Score: 73.2 bits (178), Expect = 2.4e-13 Identity = 59/147 (40.14%), Postives = 82/147 (55.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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