Chy3G055140 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCAAACTGTGTTATATCAGTCCAACCATAACTTACCCCACCAACCTATCACATGTCTGCCTAAACCTTTGTGCACTTGCTCTTACAGAAAATTATTAAACTATTCTCAACTTGACTCATTGTTAATAAATTGAATTATAGGTCCTCTCCAAGTTCCTTCTTTACATTATCCTTGGAATTTCAAAGAGGAATATGGGGTTTGAAACATTGGCCTCCTATCTTTTCTCCCTTCTCATTGCATATTTCTTTTTAAATCTCCCCTCCAAATTGACTGCACATTACATTCACCAATCTTCATCCACCAACCTTTATGAATACGGACCTCCTCCGCTGCCGCTGTCACCGCCACCTCCGATATGCAGACAAGGCGCACCACCACCAGCCAAGAAACAAAACAAATTGAAGCCGCTGCCATCGTTGTCGCCACCACCACCCAAGTTCAAATGGCCACGAAGATTTACCCCTAAATCACCTCCGCCTCCTTTCTAA ATGGCTCAAACTGTCCTCTCCAAGTTCCTTCTTTACATTATCCTTGGAATTTCAAAGAGGAATATGGGGTTTGAAACATTGGCCTCCTATCTTTTCTCCCTTCTCATTGCATATTTCTTTTTAAATCTCCCCTCCAAATTGACTGCACATTACATTCACCAATCTTCATCCACCAACCTTTATGAATACGGACCTCCTCCGCTGCCGCTGTCACCGCCACCTCCGATATGCAGACAAGGCGCACCACCACCAGCCAAGAAACAAAACAAATTGAAGCCGCTGCCATCGTTGTCGCCACCACCACCCAAGTTCAAATGGCCACGAAGATTTACCCCTAAATCACCTCCGCCTCCTTTCTAA ATGGCTCAAACTGTCCTCTCCAAGTTCCTTCTTTACATTATCCTTGGAATTTCAAAGAGGAATATGGGGTTTGAAACATTGGCCTCCTATCTTTTCTCCCTTCTCATTGCATATTTCTTTTTAAATCTCCCCTCCAAATTGACTGCACATTACATTCACCAATCTTCATCCACCAACCTTTATGAATACGGACCTCCTCCGCTGCCGCTGTCACCGCCACCTCCGATATGCAGACAAGGCGCACCACCACCAGCCAAGAAACAAAACAAATTGAAGCCGCTGCCATCGTTGTCGCCACCACCACCCAAGTTCAAATGGCCACGAAGATTTACCCCTAAATCACCTCCGCCTCCTTTCTAA MAQTVLSKFLLYIILGISKRNMGFETLASYLFSLLIAYFFLNLPSKLTAHYIHQSSSTNLYEYGPPPLPLSPPPPICRQGAPPPAKKQNKLKPLPSLSPPPPKFKWPRRFTPKSPPPPF* Homology
BLAST of Chy3G055140 vs. ExPASy TrEMBL
Match: A0A0A0KI69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G336260 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.6e-45 Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0
BLAST of Chy3G055140 vs. ExPASy TrEMBL
Match: A0A5A7UW72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold874G00250 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.9e-41 Identity = 90/98 (91.84%), Postives = 93/98 (94.90%), Query Frame = 0
BLAST of Chy3G055140 vs. ExPASy TrEMBL
Match: A0A5D3E2A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold63236G00010 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 9.4e-17 Identity = 67/140 (47.86%), Postives = 76/140 (54.29%), Query Frame = 0
BLAST of Chy3G055140 vs. ExPASy TrEMBL
Match: A0A6J1JSJ5 (extensin-like OS=Cucurbita maxima OX=3661 GN=LOC111489394 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 5.9e-11 Identity = 56/105 (53.33%), Postives = 63/105 (60.00%), Query Frame = 0
BLAST of Chy3G055140 vs. ExPASy TrEMBL
Match: A0A6J1FFZ9 (extensin-like OS=Cucurbita moschata OX=3662 GN=LOC111445143 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.9e-09 Identity = 54/110 (49.09%), Postives = 63/110 (57.27%), Query Frame = 0
BLAST of Chy3G055140 vs. NCBI nr
Match: KAA0058957.1 (hypothetical protein E6C27_scaffold98G001420 [Cucumis melo var. makuwa] >TYK10990.1 hypothetical protein E5676_scaffold874G00250 [Cucumis melo var. makuwa]) HSP 1 Score: 175 bits (444), Expect = 1.77e-54 Identity = 90/98 (91.84%), Postives = 93/98 (94.90%), Query Frame = 0
BLAST of Chy3G055140 vs. NCBI nr
Match: TYK29731.1 (hypothetical protein E5676_scaffold63236G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 93.6 bits (231), Expect = 1.45e-21 Identity = 67/140 (47.86%), Postives = 76/140 (54.29%), Query Frame = 0
BLAST of Chy3G055140 vs. NCBI nr
Match: XP_022993352.1 (extensin-like [Cucurbita maxima]) HSP 1 Score: 74.7 bits (182), Expect = 1.26e-14 Identity = 56/105 (53.33%), Postives = 63/105 (60.00%), Query Frame = 0
BLAST of Chy3G055140 vs. NCBI nr
Match: XP_023551507.1 (extensin-3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 72.8 bits (177), Expect = 7.93e-14 Identity = 51/100 (51.00%), Postives = 59/100 (59.00%), Query Frame = 0
BLAST of Chy3G055140 vs. NCBI nr
Match: XP_022939147.1 (extensin-like [Cucurbita moschata]) HSP 1 Score: 69.7 bits (169), Expect = 1.34e-12 Identity = 54/110 (49.09%), Postives = 63/110 (57.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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