Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGGGAAAGCAACAAACCCGATTCCCCTAATCCCAACCTTAAATGCTCACATATATCGACTAAGGTCTGCGAGCTAATTCCTTTCACTAGGAATATGTGTCCCTTAGAGTTGGGAGACGATGGAAATGGCTTCGGTGATATTAGCAATGACGAGTTTGATGTGTTTGATATAGACTTGGGAGTAGAACTCGGAGGTGATGATGAGAATCTTGGTCTTCATGGTGTTAGTATGTCTTAGGCAGATGTCCAAGTACATCATGAAGAATTACCACTTAAGGAATGTGTAGTGGAAAGTGACGACGAAGAATTTCCTCCAACAATTGGCAAGAAAAAGTGAAAGTGTGTTGAAAAGTTGTTGGAACGCACCATTTTTGTATCTGTCGAGTCATACCTCGAATACGTACAAGTCGGTTCTTTGTTTTTTAATAAGAAAGATTTGGTGAAGAAACTTGCGGTGTTTGCCATAATGCAAAACTTTTAGTTTCGTGTGCATAGAAACTAAGGGCTACGAAACTGAAAGATTCTGATCTGTTTAAGGTCTCTAAGTATGAAAGGACGCACACATGGAAAAAAGTCCTGAGGAAACAAGACCATAAGCAATCTAAGAGTTGGGTTATAGCCAAAAGAATCCAGTCGAAGTATGAAGATGTTAGTCGTGGTTATAGGCCCAAAGAAATAATTCAGAATTTCCTAAAGGAGTTTGACATTGATCTGTCGTAGGATAGGGCTGAGGGCTCGAGAGGCCACACTTTTGATGGTAAGGGGTTCCCCCAGAGAAATTTACGCTTTATTGGCTCGGTTTGGAGAAGCATTAAAGATTACCAATTCGGGAACTTAATATAATTTGAAGGTTGATCTAGATGGTCATTTTTGG
mRNA sequence
ATGGCGAGGGAAAGCAACAAACCCGATTCCCCTAATCCCAACCTTAAATGCTCACATATATCGACTAAGGTCTGCGAGCTAATTCCTTTCACTAGGAATATGTGTCCCTTAGAGTTGGGAGACGATGGAAATGGCTTCGATGTCCAAGTACATCATGAAGAATTACCACTTAAGGAATGTGTAGTGGAAAGTGACGACGAAGAATTTCCTCCAACAATTGGCAAGAAAAAGTGAAAGTGTGTTGAAAAGTTGTTGGAACGCACCATTTTTTTTCGTGTGCATAGAAACTAAGGGCTACGAAACTGAAAGATTCTGATCTGTTTAAGGTCTCTAAGTATGAAAGGACGCACACATGGAAAAAAGTCCTGAGGAAACAAGACCATAAGCAATCTAAGAGTTGGGTTATAGCCAAAAGAATCCAGTCGAAGTATGAAGATGTTAGTCGTGGTTATAGGCCCAAAGAAATAATTCAGAATTTCCTAAAGGAGTTTGACATTGATCTGTCGTAGGATAGGGCTGAGGGCTCGAGAGGCCACACTTTTGATGGTAAGGGGTTCCCCCAGAGAAATTTACGCTTTATTGGCTCGGTTTGGAGAAGCATTAAAGATTACCAATTCGGGAACTTAATATAATTTGAAGGTTGATCTAGATGGTCATTTTTGG
Coding sequence (CDS)
ATGGCGAGGGAAAGCAACAAACCCGATTCCCCTAATCCCAACCTTAAATGCTCACATATATCGACTAAGGTCTGCGAGCTAATTCCTTTCACTAGGAATATGTGTCCCTTAGAGTTGGGAGACGATGGAAATGGCTTCGATGTCCAAGTACATCATGAAGAATTACCACTTAAGGAATGTGTAGTGGAAAGTGACGACGAAGAATTTCCTCCAACAATTGGCAAGAAAAAGTGAAAGTGTGTTGAAAAGTTGTTGGAACGCACCATTTTTTTTCGTGTGCATAGAAACTAAGGGCTACGAAACTGAAAGATTCTGATCTGTTTAAGGTCTCTAAGTATGAAAGGACGCACACATGGAAAAAAGTCCTGAGGAAACAAGACCATAAGCAATCTAAGAGTTGGGTTATAGCCAAAAGAATCCAGTCGAAGTATGAAGATGTTAGTCGTGGTTATAGGCCCAAAGAAATAATTCAGAATTTCCTAAAGGAGTTTGACATTGATCTGTCGTAGGATAGGGCTGAGGGCTCGAGAGGCCACACTTTTGATGGTAAGGGGTTCCCCCAGAGAAATTTACGCTTTATTGGCTCGGTTTGGAGAAGCATTAAAGATTACCAATTCGGGAACTTAATATAATTTGAAGGTTGATCTAGATGGTCATTTTTGG
Protein sequence
MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGFDVQVHHEELPLKECVVESDDEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLRN*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMKMLVVVIGPKK*FRIS*RSLTLICRRIGLRAREATLLMVRGSPREIYALLARFGEALKITNSGT*YNLKVDLDGHFW
Homology
BLAST of Chy3G054980 vs. ExPASy TrEMBL
Match:
A0A0A0K9J4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G057140 PE=4 SV=1)
HSP 1 Score: 165.6 bits (418), Expect = 2.3e-37
Identity = 86/118 (72.88%), Postives = 95/118 (80.51%), Query Frame = 0
Query: 1 MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGFDVQVHHEELPLKEC 60
MARESNKPD+PNPNLKCSHI TKVCELI FT NMCPLELGD+ NGFDVQV HEE+PLKE
Sbjct: 1 MARESNKPDAPNPNLKCSHILTKVCELILFTTNMCPLELGDNENGFDVQVDHEEVPLKEG 60
Query: 61 VVESDDEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLRN*KILICLRS-LSMKGRT 118
VESDDEE PP+IGK+ K V+KLLERTIFFRVHR+ +N +L C S S K RT
Sbjct: 61 AVESDDEEVPPSIGKQMRKRVKKLLERTIFFRVHRS--NKNFYVLRCSNSAYSWKLRT 116
BLAST of Chy3G054980 vs. ExPASy TrEMBL
Match:
A0A5A7U446 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G001340 PE=4 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 1.6e-14
Identity = 77/255 (30.20%), Postives = 107/255 (41.96%), Query Frame = 0
Query: 1 MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGF-------------- 60
M +S K D P PNL CSH+S + L P RN+CPLELG+D G
Sbjct: 10 MVSKSKKLDFPTPNLNCSHVSNEDRNLRPLARNVCPLELGNDRGGLGSIDNEEFVDDGGH 69
Query: 61 --------------------DVQVHHE-ELPLKECVVESDDEEFPPTIGKKK*KCVEKLL 120
+ Q+H+E + + +++SD++E P I KKK K VEKL+
Sbjct: 70 ESDIEFKGDDDVHGLHMFDSNAQLHYEVNIDNEHEILKSDEDESPHLITKKKQKRVEKLM 129
Query: 121 ERTIFFRVHRN*GLRN*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMK 180
T+F L + +K ++ S +
Sbjct: 130 GCTVFLLAES-----------YLEDVQLK----------------------YEDVSHCYR 189
Query: 181 MLVVVIGPKK*FRIS*RSLTLICRRIGLRAREATLLMVRGSPREIYALLARFGEALKITN 221
++ K F I L +R+ RA+E M RG +E YALLAR EALKI N
Sbjct: 190 SKEIIQDFLKEFGID-----LSYKRV-WRAQEVIHSMTRGFLKESYALLARHKEALKIAN 225
BLAST of Chy3G054980 vs. ExPASy TrEMBL
Match:
A0A5D3C7U6 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001830 PE=4 SV=1)
HSP 1 Score: 77.4 bits (189), Expect = 8.3e-11
Identity = 71/243 (29.22%), Postives = 99/243 (40.74%), Query Frame = 0
Query: 1 MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGF-------------- 60
M +S K D P PNL CSH+S + L P RN+CPLELG+D G
Sbjct: 10 MVSKSKKLDFPTPNLNCSHVSNEDRNLRPLARNVCPLELGNDRGGLGSIDNEEFVDDGGH 69
Query: 61 --------------------DVQVHHE-ELPLKECVVESDDEEFPPTIGKKK*KCVEKLL 120
+ Q+H+E + + +++SD++E P I KKK K VEKL+
Sbjct: 70 ESDIEFKGDDDVHGLHMFDSNAQLHYEVNIDNEHEILKSDEDESPHLITKKKQKRVEKLM 129
Query: 121 ERTIFFRVHRN*GLRN*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMK 180
T+F L + +K ++ S +
Sbjct: 130 GCTVFLLAES-----------YLEDVQLK----------------------YEDVSHCYR 189
Query: 181 MLVVVIGPKK*FRIS*RSLTLICRRIGLRAREATLLMVRGSPREIYALLARFGEALKITN 209
++ K F I L +R+ RA+E M RG +E YALLAR EALKI N
Sbjct: 190 SKEIIQDFLKEFGID-----LSYKRV-WRAQEVIHSMTRGFLKESYALLARHKEALKIAN 213
BLAST of Chy3G054980 vs. ExPASy TrEMBL
Match:
A0A0A0K393 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G206960 PE=4 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 1.1e-10
Identity = 48/119 (40.34%), Postives = 58/119 (48.74%), Query Frame = 0
Query: 1 MARESNKPDSPNPNLKCSHISTKVCELIPFTRNM-------------------------- 60
MA E+ KP+SPNPNLKCSH+ST+V EL T N
Sbjct: 1 MASETKKPNSPNPNLKCSHVSTEVHELSLLTANWQCIDNYELVNNFGHDSGIEHRGDDEN 60
Query: 61 ------CPLELGDDGNGFDV----------QVHHEELPLKECVVESDDEEFPPTIGKKK 78
+ELG D D+ QVHHEELPL+E VESDDE+ P++GKKK
Sbjct: 61 IGLHMDLEVELGGDYKNLDLRGVDMSEADAQVHHEELPLEEGAVESDDEKVLPSVGKKK 119
BLAST of Chy3G054980 vs. ExPASy TrEMBL
Match:
A0A5D3E646 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2376G00090 PE=4 SV=1)
HSP 1 Score: 75.5 bits (184), Expect = 3.1e-10
Identity = 70/220 (31.82%), Postives = 84/220 (38.18%), Query Frame = 0
Query: 1 MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGFDVQVHHEELPLKEC 60
MA ES K D N NLKCSH+S +V LIP NMCPL++GD+ +G
Sbjct: 10 MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDG--------------- 69
Query: 61 VVESDDEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLRN*KILICLRSLSMKGRTHGK 120
+ +EEF G E I F V
Sbjct: 70 LYSIGNEEFVDDGGH----------ESDIEFEV--------------------------- 129
Query: 121 KS*GNKTISNLRVGL*PKESSRSMKMLVVVIGPKK*FRIS*RSLTLICRRIGLRAREATL 180
M M K F I + RA++A L
Sbjct: 130 -----------------------MMMF-------KEFDID------LSYERAWRAQKAAL 141
Query: 181 LMVRGSPREIYALLARFGEALKITNSGT*YNLKVDLDGHF 221
MVR S RE Y LLAR+GEALKI N T YNL+V+ DGHF
Sbjct: 190 SMVRKSLRESYGLLARYGEALKIVNHRTHYNLEVEPDGHF 141
BLAST of Chy3G054980 vs. NCBI nr
Match:
KAE8652907.1 (hypothetical protein Csa_022657 [Cucumis sativus])
HSP 1 Score: 168 bits (426), Expect = 3.03e-48
Identity = 106/241 (43.98%), Postives = 133/241 (55.19%), Query Frame = 0
Query: 1 MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGFDVQVHHEELPLKEC 60
MARESNKPD+PNPNLKCSHI TKVCELI FT NMCPLELGD+ NGFDVQV HEE+PLKE
Sbjct: 1 MARESNKPDAPNPNLKCSHILTKVCELILFTTNMCPLELGDNENGFDVQVDHEEVPLKEG 60
Query: 61 VVESDDEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLRN*KILIC--------LRSLS 120
VESDDEE PP+IGK+ K V+KLLERTIFFRVHR+ +N +L C LR+
Sbjct: 61 AVESDDEEVPPSIGKQMRKRVKKLLERTIFFRVHRS--NKNFYVLRCSNSAYSWKLRTTK 120
Query: 121 MKGRTHGKKS*GNKTISNLRVGL*PKESSRSMKMLVVV-------------IGPKK*FRI 180
+K K S +T + +V ++ + K V+ PK+ +
Sbjct: 121 LKDFDLFKVSKYERTHTCQKVQ--SRQDHKQAKSWVIAKPIQSKYEDVSRGYMPKEIIQN 180
Query: 181 S*RSLTLICRRIGLRAREATLLMVRGSPREIYALLARFGEALKITNSGT*YNLKVDLDGH 220
+ + + G + + LKI NS T YN +VD +GH
Sbjct: 181 FPKEFDIDLSYDRTEGSRGHIFYGNGVLQRNLLFIGLVWRTLKIANSETQYNFEVDPNGH 237
BLAST of Chy3G054980 vs. NCBI nr
Match:
KAA0048219.1 (MuDRA-like transposase [Cucumis melo var. makuwa])
HSP 1 Score: 89.4 bits (220), Expect = 2.91e-17
Identity = 79/255 (30.98%), Postives = 108/255 (42.35%), Query Frame = 0
Query: 1 MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNG--------------- 60
M +S K D P PNL CSH+S + L P RN+CPLELG+D G
Sbjct: 10 MVSKSKKLDFPTPNLNCSHVSNEDRNLRPLARNVCPLELGNDRGGLGSIDNEEFVDDGGH 69
Query: 61 -----------------FD--VQVHHE-ELPLKECVVESDDEEFPPTIGKKK*KCVEKLL 120
FD Q+H+E + + +++SD++E P I KKK K VEKL+
Sbjct: 70 ESDIEFKGDDDVHGLHMFDSNAQLHYEVNIDNEHEILKSDEDESPHLITKKKQKRVEKLM 129
Query: 121 ERTIFFRVHRN*GLRN*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMK 180
T+F L + +K ++ S +
Sbjct: 130 GCTVFLLAESY-----------LEDVQLKY----------------------EDVSHCYR 189
Query: 181 MLVVVIGPKK*FRIS*RSLTLICRRIGLRAREATLLMVRGSPREIYALLARFGEALKITN 220
++ K F I L +R+ RA+E M RG +E YALLAR EALKI N
Sbjct: 190 SKEIIQDFLKEFGID-----LSYKRVW-RAQEVIHSMTRGFLKESYALLARHKEALKIAN 225
BLAST of Chy3G054980 vs. NCBI nr
Match:
KAA0051701.1 (MuDRA-like transposase [Cucumis melo var. makuwa] >TYK31607.1 MuDRA-like transposase [Cucumis melo var. makuwa])
HSP 1 Score: 75.1 bits (183), Expect = 4.98e-13
Identity = 70/220 (31.82%), Postives = 84/220 (38.18%), Query Frame = 0
Query: 1 MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGFDVQVHHEELPLKEC 60
MA ES K D N NLKCSH+S +V LIP NMCPL++GD+ +G
Sbjct: 10 MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDG--------------- 69
Query: 61 VVESDDEEFPPTIGKKK*KCVEKLLERTIFFRVHRN*GLRN*KILICLRSLSMKGRTHGK 120
+ +EEF G E I F V
Sbjct: 70 LYSIGNEEFVDDGGH----------ESDIEFEV--------------------------- 129
Query: 121 KS*GNKTISNLRVGL*PKESSRSMKMLVVVIGPKK*FRIS*RSLTLICRRIGLRAREATL 180
M M K F I + RA++A L
Sbjct: 130 -----------------------MMMF-------KEFDID------LSYERAWRAQKAAL 141
Query: 181 LMVRGSPREIYALLARFGEALKITNSGT*YNLKVDLDGHF 220
MVR S RE Y LLAR+GEALKI N T YNL+V+ DGHF
Sbjct: 190 SMVRKSLRESYGLLARYGEALKIVNHRTHYNLEVEPDGHF 141
BLAST of Chy3G054980 vs. NCBI nr
Match:
TYK08037.1 (MuDRA-like transposase [Cucumis melo var. makuwa])
HSP 1 Score: 77.4 bits (189), Expect = 1.05e-12
Identity = 73/243 (30.04%), Postives = 100/243 (41.15%), Query Frame = 0
Query: 1 MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNG--------------- 60
M +S K D P PNL CSH+S + L P RN+CPLELG+D G
Sbjct: 10 MVSKSKKLDFPTPNLNCSHVSNEDRNLRPLARNVCPLELGNDRGGLGSIDNEEFVDDGGH 69
Query: 61 -----------------FD--VQVHHE-ELPLKECVVESDDEEFPPTIGKKK*KCVEKLL 120
FD Q+H+E + + +++SD++E P I KKK K VEKL+
Sbjct: 70 ESDIEFKGDDDVHGLHMFDSNAQLHYEVNIDNEHEILKSDEDESPHLITKKKQKRVEKLM 129
Query: 121 ERTIFFRVHRN*GLRN*KILICLRSLSMKGRTHGKKS*GNKTISNLRVGL*PKESSRSMK 180
T+F L + +K ++ S +
Sbjct: 130 GCTVFLLAESY-----------LEDVQLKY----------------------EDVSHCYR 189
Query: 181 MLVVVIGPKK*FRIS*RSLTLICRRIGLRAREATLLMVRGSPREIYALLARFGEALKITN 208
++ K F I L +R+ RA+E M RG +E YALLAR EALKI N
Sbjct: 190 SKEIIQDFLKEFGID-----LSYKRVW-RAQEVIHSMTRGFLKESYALLARHKEALKIAN 213
BLAST of Chy3G054980 vs. NCBI nr
Match:
TYK16337.1 (hypothetical protein E5676_scaffold21G001190 [Cucumis melo var. makuwa])
HSP 1 Score: 65.9 bits (159), Expect = 3.97e-10
Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = 0
Query: 1 MARESNKPDSPNPNLKCSHISTKVCELIPFTRNMCPLELGDDGNGF 46
MA ES KP SPNPN K SH+S ++ EL P T NMCPLEL D+G GF
Sbjct: 1 MASESKKPHSPNPNPKHSHVSNEIRELSPLTTNMCPLELEDNGYGF 46
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K9J4 | 2.3e-37 | 72.88 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G057140 PE=4 SV=1 | [more] |
A0A5A7U446 | 1.6e-14 | 30.20 | MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6... | [more] |
A0A5D3C7U6 | 8.3e-11 | 29.22 | MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... | [more] |
A0A0A0K393 | 1.1e-10 | 40.34 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G206960 PE=4 SV=1 | [more] |
A0A5D3E646 | 3.1e-10 | 31.82 | MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... | [more] |
Match Name | E-value | Identity | Description | |
KAE8652907.1 | 3.03e-48 | 43.98 | hypothetical protein Csa_022657 [Cucumis sativus] | [more] |
KAA0048219.1 | 2.91e-17 | 30.98 | MuDRA-like transposase [Cucumis melo var. makuwa] | [more] |
KAA0051701.1 | 4.98e-13 | 31.82 | MuDRA-like transposase [Cucumis melo var. makuwa] >TYK31607.1 MuDRA-like transpo... | [more] |
TYK08037.1 | 1.05e-12 | 30.04 | MuDRA-like transposase [Cucumis melo var. makuwa] | [more] |
TYK16337.1 | 3.97e-10 | 65.22 | hypothetical protein E5676_scaffold21G001190 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |