Chy3G054910 (gene) Cucumber (hystrix) v1

Overview
NameChy3G054910
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH03: 7085608 .. 7086016 (+)
RNA-Seq ExpressionChy3G054910
SyntenyChy3G054910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGCATATGGATGCTGCAGCAAAGAGTGGCAAGGAAAATGTAACTTTGCACTGAACTATACTAATTCCTCTTCTTCCAACCTGTTAGTGTATAAACAGTAAACATGAATCCAAAACTGTCAACTTCAAGACCAAAAAGGCTCGACTAAATAAAGATATATCCATAAGAACATTTTCTTCATGAGAATATAAGAATACTAACAGTTGTTTCCTAAGCAATAATCCCTGGAGCGGGCGAGCCAACTCAAGCGCTTCAAGTAGCAGTATTCTATCAGATTTACAGATCGTCGAGATTTGCACAGATATGCTGGAAATAACATTGGATGATGAAGAAATGTGCTTGAAGGATCAGTATACACAAGAGGGAAAAACAACCTCCGAATCAGAGATGTTGCAACTTCTCTAA

mRNA sequence

ATGACTGCATATGGATGCTGCAGCAAAGAGTGGCAAGGAAAATGTAACTTTGCACTGAACTATACTAATTCCTCTTCTTCCAACCTTTGTTTCCTAAGCAATAATCCCTGGAGCGGGCGAGCCAACTCAAGCGCTTCAAGTAGCAGTATTCTATCAGATTTACAGATCGTCGAGATTTGCACAGATATGCTGGAAATAACATTGGATGATGAAGAAATGTGCTTGAAGGATCAGTATACACAAGAGGGAAAAACAACCTCCGAATCAGAGATGTTGCAACTTCTCTAA

Coding sequence (CDS)

ATGACTGCATATGGATGCTGCAGCAAAGAGTGGCAAGGAAAATGTAACTTTGCACTGAACTATACTAATTCCTCTTCTTCCAACCTTTGTTTCCTAAGCAATAATCCCTGGAGCGGGCGAGCCAACTCAAGCGCTTCAAGTAGCAGTATTCTATCAGATTTACAGATCGTCGAGATTTGCACAGATATGCTGGAAATAACATTGGATGATGAAGAAATGTGCTTGAAGGATCAGTATACACAAGAGGGAAAAACAACCTCCGAATCAGAGATGTTGCAACTTCTCTAA

Protein sequence

MTAYGCCSKEWQGKCNFALNYTNSSSSNLCFLSNNPWSGRANSSASSSSILSDLQIVEICTDMLEITLDDEEMCLKDQYTQEGKTTSESEMLQLL*
Homology
[Close]
BLAST of Chy3G054910 vs. ExPASy TrEMBL
Match: A0A0A0K9J1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G057090 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MTAYGCCSKEWQGKCNFALNYTNSSSSNLCFLSNNPWSGRANSSASSSSILSDLQIVEIC 60
          MTAYGCCSKEWQGKCNFALNYTNSSSSNLCFLSNNPWSGRANSSASSSSILS+LQIVEIC
Sbjct: 1  MTAYGCCSKEWQGKCNFALNYTNSSSSNLCFLSNNPWSGRANSSASSSSILSELQIVEIC 60

Query: 61 TDMLEITLDDEEMCLKDQYTQEGKTTSESEMLQLL 96
          TDMLEIT DDEEMCLKDQYTQEGKTTSESEMLQLL
Sbjct: 61 TDMLEITWDDEEMCLKDQYTQEGKTTSESEMLQLL 95

[Close]
BLAST of Chy3G054910 vs. NCBI nr
Match: KGN46143.1 (hypothetical protein Csa_005463 [Cucumis sativus])

HSP 1 Score: 183 bits (464), Expect = 5.38e-58
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MTAYGCCSKEWQGKCNFALNYTNSSSSNLCFLSNNPWSGRANSSASSSSILSDLQIVEIC 60
          MTAYGCCSKEWQGKCNFALNYTNSSSSNLCFLSNNPWSGRANSSASSSSILS+LQIVEIC
Sbjct: 1  MTAYGCCSKEWQGKCNFALNYTNSSSSNLCFLSNNPWSGRANSSASSSSILSELQIVEIC 60

Query: 61 TDMLEITLDDEEMCLKDQYTQEGKTTSESEMLQLL 95
          TDMLEIT DDEEMCLKDQYTQEGKTTSESEMLQLL
Sbjct: 61 TDMLEITWDDEEMCLKDQYTQEGKTTSESEMLQLL 95

The following BLAST results are available for this feature:
BLAST of Chy3G054910 vs.
Match NameE-valueIdentityDescription
BLAST of Chy3G054910 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9J11.2e-4397.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G057090 PE=4 SV=1[more]
BLAST of Chy3G054910 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46143.15.38e-5897.89hypothetical protein Csa_005463 [Cucumis sativus][more]
BLAST of Chy3G054910 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G054910.1Chy3G054910.1mRNA