Chy3G054560 (gene) Cucumber (hystrix) v1

Overview
NameChy3G054560
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionMRN complex-interacting protein isoform X2
LocationchrH03: 6644459 .. 6645626 (-)
RNA-Seq ExpressionChy3G054560
SyntenyChy3G054560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACGATCTTCATCGCAGTCCAGTGCTTTCAATGTTCCATCATGCAGGTACCGAACTCTCTGTCACTGTTTCTTAGTCCTTCAACGTCTCTCTCTACCTTCTGTAATGGCGATGGTTTCGATTTAGGTGAAGCAGCAGCGGAAGAGCGGGAACAAGTGGATCTGTGCAGTGTGTAACCAGAAGCAATCGGTGCAGAAGGTGTTTGCTCGAGCTCCTATTGCTAAAGACGTCCGTAAATTCGTACAAAGCTTCAATATGTCGCGGAAATATGCGAATGAACAGGCGAACGTCGACGAGCTAATTGATGGAGAAACTGTTGATGACGATAAGCTTGTTTGCAGTGGGAGGAGAAAGAGACGTAACGATTGGAGTGACTATCTCGATCCAGTGGAAGATCGGAGCCATAGTGGAAAAGAAAACGAAGGAGAATTAGGTCACTAAATTTTTAAATACATATTTACAATTCGTTTTAATCAACTTCGAAGAAAAATCTTTGTTAGATGATGATTTTTTTCCTGTATCAGAAAGTGATTTAAAGATCATGACGGAGCTTCCAGACATTAAAACCTGGAAATCTGGTTCAAGGAGCTGTTCAAGCTGGTCGGAAGAAGGAGAAGGCGATGGATTTTACAGACCACTTTTCTCTAAGAGAAAACATATAACCAATAATTTGAGCTCCCAAGGTAAAAATTGATGTTCATATAACTTCTTGCACTTCAAGAAAAAAAAAAGATAAAAAACGTCAATAAAATTGCAGATGAGATCCGAAACTGGGAGTCGCCGTCGGCAATTCACGCATCAAAATTGAGTAAAGGCGATGATGAGCAAACTTTCTCGACGGCCAAATACTTGAGTGCGCCTTTCCAGGACAAGAAGATGGGCAAAAACAGCCATAAAGTTGTGGATGAGATTCAAAACTGGGAGTTGCCATCAGAAATTGAAGCATCAAAGTGGAGTAAAGATGATGAAAATTCAAGGACGAAAAGTTGCATATTAGGTAAGGTAAGAGGAGCTTCATCAAAGTGGAGTGAATACATAACTGAAGAAGAAAGTTGTGGAGGCAGAAACGAAGAAAATATGGCGAGAGAACAGGGAATGGATGTCTTGAAGATGATGATAAATGAAGAAATTGTTGAAGATGATGTCCACCCGGATTTCAAATGA

mRNA sequence

ATGGCGACGATCTTCATCGCAGTCCAGTGCTTTCAATGTTCCATCATGCAGGTGAAGCAGCAGCGGAAGAGCGGGAACAAGTGGATCTGTGCAGTGTGTAACCAGAAGCAATCGGTGCAGAAGGTGTTTGCTCGAGCTCCTATTGCTAAAGACGTCCGTAAATTCGTACAAAGCTTCAATATGTCGCGGAAATATGCGAATGAACAGGCGAACGTCGACGAGCTAATTGATGGAGAAACTGTTGATGACGATAAGCTTGTTTGCAGTGGGAGGAGAAAGAGACGTAACGATTGGAGTGACTATCTCGATCCAGTGGAAGATCGGAGCCATAGTGGAAAAGAAAACGAAGGAGAATTAGAAAGTGATTTAAAGATCATGACGGAGCTTCCAGACATTAAAACCTGGAAATCTGGTTCAAGGAGCTGTTCAAGCTGGTCGGAAGAAGGAGAAGGCGATGGATTTTACAGACCACTTTTCTCTAAGAGAAAACATATAACCAATAATTTGAGCTCCCAAGATGAGATCCGAAACTGGGAGTCGCCGTCGGCAATTCACGCATCAAAATTGAGTAAAGGCGATGATGAGCAAACTTTCTCGACGGCCAAATACTTGAGTGCGCCTTTCCAGGACAAGAAGATGGGCAAAAACAGCCATAAAGTTGTGGATGAGATTCAAAACTGGGAGTTGCCATCAGAAATTGAAGCATCAAAGTGGAGTAAAGATGATGAAAATTCAAGGACGAAAAGTTGCATATTAGGTAAGGTAAGAGGAGCTTCATCAAAGTGGAGTGAATACATAACTGAAGAAGAAAGTTGTGGAGGCAGAAACGAAGAAAATATGGCGAGAGAACAGGGAATGGATGTCTTGAAGATGATGATAAATGAAGAAATTGTTGAAGATGATGTCCACCCGGATTTCAAATGA

Coding sequence (CDS)

ATGGCGACGATCTTCATCGCAGTCCAGTGCTTTCAATGTTCCATCATGCAGGTGAAGCAGCAGCGGAAGAGCGGGAACAAGTGGATCTGTGCAGTGTGTAACCAGAAGCAATCGGTGCAGAAGGTGTTTGCTCGAGCTCCTATTGCTAAAGACGTCCGTAAATTCGTACAAAGCTTCAATATGTCGCGGAAATATGCGAATGAACAGGCGAACGTCGACGAGCTAATTGATGGAGAAACTGTTGATGACGATAAGCTTGTTTGCAGTGGGAGGAGAAAGAGACGTAACGATTGGAGTGACTATCTCGATCCAGTGGAAGATCGGAGCCATAGTGGAAAAGAAAACGAAGGAGAATTAGAAAGTGATTTAAAGATCATGACGGAGCTTCCAGACATTAAAACCTGGAAATCTGGTTCAAGGAGCTGTTCAAGCTGGTCGGAAGAAGGAGAAGGCGATGGATTTTACAGACCACTTTTCTCTAAGAGAAAACATATAACCAATAATTTGAGCTCCCAAGATGAGATCCGAAACTGGGAGTCGCCGTCGGCAATTCACGCATCAAAATTGAGTAAAGGCGATGATGAGCAAACTTTCTCGACGGCCAAATACTTGAGTGCGCCTTTCCAGGACAAGAAGATGGGCAAAAACAGCCATAAAGTTGTGGATGAGATTCAAAACTGGGAGTTGCCATCAGAAATTGAAGCATCAAAGTGGAGTAAAGATGATGAAAATTCAAGGACGAAAAGTTGCATATTAGGTAAGGTAAGAGGAGCTTCATCAAAGTGGAGTGAATACATAACTGAAGAAGAAAGTTGTGGAGGCAGAAACGAAGAAAATATGGCGAGAGAACAGGGAATGGATGTCTTGAAGATGATGATAAATGAAGAAATTGTTGAAGATGATGTCCACCCGGATTTCAAATGA

Protein sequence

MATIFIAVQCFQCSIMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPIAKDVRKFVQSFNMSRKYANEQANVDELIDGETVDDDKLVCSGRRKRRNDWSDYLDPVEDRSHSGKENEGELESDLKIMTELPDIKTWKSGSRSCSSWSEEGEGDGFYRPLFSKRKHITNNLSSQDEIRNWESPSAIHASKLSKGDDEQTFSTAKYLSAPFQDKKMGKNSHKVVDEIQNWELPSEIEASKWSKDDENSRTKSCILGKVRGASSKWSEYITEEESCGGRNEENMAREQGMDVLKMMINEEIVEDDVHPDFK*
Homology
BLAST of Chy3G054560 vs. ExPASy Swiss-Prot
Match: Q32PP1 (MRN complex-interacting protein OS=Danio rerio OX=7955 GN=mrnip PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.0e-08
Identity = 75/301 (24.92%), Postives = 119/301 (39.53%), Query Frame = 0

Query: 1   MATIFIAVQCFQCSIMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPIAKDVRKFVQSFN 60
           M   F  ++CF C   QV QQ K   KW C VC +KQS+ K F R   A D R+ VQ  N
Sbjct: 1   MVQEFNVLRCFSCQTFQV-QQVKKAKKWTCKVCGEKQSLIKEFGRG-AAADCRRHVQKLN 60

Query: 61  MSRKYANEQANVDELI---DGETVDDDKLVCSGRRKRRND-----WSDYLDPVEDRSHSG 120
             R     Q N  +L+   D E  ++D       +  + +     WS Y D   +  +  
Sbjct: 61  ALRG-EQHQLNTQQLLAQGDEENENEDVYEVLDPKSEQEEAHVSRWSKYTDQTTEGPNEE 120

Query: 121 KENEGELESDLKIMTELPDIKTWKSGSR-----------SCSSWSEEGEGDGFYR----- 180
           K++E E   D  + TE P  +   +  R           +C ++ E   G   +R     
Sbjct: 121 KDDEDE---DENVYTERPQFRIQGTRKRKKMSSLEPFGGNCDNYEESRAGYSQFRKQAYL 180

Query: 181 PL-FSKRKHITNNLSSQDEIRNWESPSAIHASKLSK-GDDEQTF--------STAKYLSA 240
           PL   KR   + N  S  +  N + P  +  S  +K     QT         S+   +  
Sbjct: 181 PLQLEKRSSSSWNKGSVSKYSNCQRPDDVVPSARTKLPSSRQTVGHYPTACSSSTNTMEN 240

Query: 241 PFQDKKMGKNSHKVVDEIQNWELPSEIEASKWSKDDENSRTKSCILGKVRGASSKWSEYI 268
              +K+  K+S++      N  LP + E+   S   +   +       +    SKW++++
Sbjct: 241 SIGNKQQIKSSYRPPTADVNKHLPIQSESPSVSSHQKFGES------TIENKDSKWNKFL 289

BLAST of Chy3G054560 vs. ExPASy TrEMBL
Match: A0A0A0KCJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052770 PE=4 SV=1)

HSP 1 Score: 585.1 bits (1507), Expect = 1.7e-163
Identity = 289/307 (94.14%), Postives = 296/307 (96.42%), Query Frame = 0

Query: 1   MATIFIAVQCFQCSIMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPIAKDVRKFVQSFN 60
           MATIFIAVQCFQCS MQVKQQRKSGNKWICAVCNQKQSVQKVFARAP+AKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYANEQANVDELIDGETVDDDKLVCSGRRKRRNDWSDYLDPVEDRSHSGKENEGELE 120
           MSRKYANEQANVDELIDG  VDDDKLVCSGRRK R+DWSDYLDPVEDRSHSG+ENE ELE
Sbjct: 61  MSRKYANEQANVDELIDGGIVDDDKLVCSGRRKSRSDWSDYLDPVEDRSHSGRENEVELE 120

Query: 121 SDLKIMTELPDIKTWKSGSRSCSSWSEEGEGDGFYRPLFSKRKHITNNLSSQDEIRNWES 180
           SDLKI+TELPDIKTWKSGSRSCSSWSEEGEGDG YRPLFSKRKHI NNLSSQDEIRNWES
Sbjct: 121 SDLKIVTELPDIKTWKSGSRSCSSWSEEGEGDGLYRPLFSKRKHIANNLSSQDEIRNWES 180

Query: 181 PSAIHASKLSKGDDEQTFSTAKYLSAPFQDKKMGKNSHKVVDEIQNWELPSEIEASKWSK 240
           PSAIHASKLSKGDDEQT STAKYLSAPFQDKKMGKN HKV DEIQNWELPSEIEASKWSK
Sbjct: 181 PSAIHASKLSKGDDEQTLSTAKYLSAPFQDKKMGKNGHKVEDEIQNWELPSEIEASKWSK 240

Query: 241 DDENSRTKSCILGKVRGASSKWSEYITEEESCGGRNEENMAREQGMDVLKMMINEEIVED 300
           DDEN RTKSCILGKVRGASSKWSEYITEEE+CGGRNEENMARE+GMDVLKMMINEEIVED
Sbjct: 241 DDENLRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREEGMDVLKMMINEEIVED 300

Query: 301 DVHPDFK 308
           D+HPDFK
Sbjct: 301 DIHPDFK 307

BLAST of Chy3G054560 vs. ExPASy TrEMBL
Match: A0A5D3BXL1 (UPF0544 protein C5orf45-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00830 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.5e-156
Identity = 280/307 (91.21%), Postives = 291/307 (94.79%), Query Frame = 0

Query: 1   MATIFIAVQCFQCSIMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPIAKDVRKFVQSFN 60
           MATIFIAVQCFQCS MQVKQQRKSGNKWICAVCN+KQSVQKVFARAP+AKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYANEQANVDELIDGETVDDDKLVCSGRRKRRNDWSDYLDPVEDRSHSGKENEGELE 120
           MSRKYANEQANVD+LI G  VDDDKL CSGRRKRRNDWS+YLDP EDRSHSG+ENEGELE
Sbjct: 61  MSRKYANEQANVDDLIHGGIVDDDKLDCSGRRKRRNDWSEYLDPEEDRSHSGRENEGELE 120

Query: 121 SDLKIMTELPDIKTWKSGSRSCSSWSEEGEGDGFYRPLFSKRKHITNNLSSQDEIRNWES 180
           SDLKI TELPDIKTWKSGSRSCSSWS EGEGDG YRPLFSKRKHI  NLSSQDEI+NWES
Sbjct: 121 SDLKIATELPDIKTWKSGSRSCSSWS-EGEGDGLYRPLFSKRKHIAKNLSSQDEIQNWES 180

Query: 181 PSAIHASKLSKGDDEQTFSTAKYLSAPFQDKKMGKNSHKVVDEIQNWELPSEIEASKWSK 240
           PSAIH SKLSKGDDEQTFSTAKYLSAPFQDKKM KNSHKV  EIQNWELPSEIEASKW+K
Sbjct: 181 PSAIHTSKLSKGDDEQTFSTAKYLSAPFQDKKMSKNSHKVESEIQNWELPSEIEASKWTK 240

Query: 241 DDENSRTKSCILGKVRGASSKWSEYITEEESCGGRNEENMAREQGMDVLKMMINEEIVED 300
           DDENSRTKSCILGKVRGASSKWSEYITEEE+CGGRNEENMAREQGMD+LK MIN+EIVED
Sbjct: 241 DDENSRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREQGMDILK-MINDEIVED 300

Query: 301 DVHPDFK 308
           D+HPDFK
Sbjct: 301 DIHPDFK 305

BLAST of Chy3G054560 vs. ExPASy TrEMBL
Match: A0A1S3C3H7 (UPF0544 protein C5orf45 homolog OS=Cucumis melo OX=3656 GN=LOC103496578 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.5e-156
Identity = 280/307 (91.21%), Postives = 291/307 (94.79%), Query Frame = 0

Query: 1   MATIFIAVQCFQCSIMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPIAKDVRKFVQSFN 60
           MATIFIAVQCFQCS MQVKQQRKSGNKWICAVCN+KQSVQKVFARAP+AKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYANEQANVDELIDGETVDDDKLVCSGRRKRRNDWSDYLDPVEDRSHSGKENEGELE 120
           MSRKYANEQANVD+LI G  VDDDKL CSGRRKRRNDWS+YLDP EDRSHSG+ENEGELE
Sbjct: 61  MSRKYANEQANVDDLIHGGIVDDDKLDCSGRRKRRNDWSEYLDPEEDRSHSGRENEGELE 120

Query: 121 SDLKIMTELPDIKTWKSGSRSCSSWSEEGEGDGFYRPLFSKRKHITNNLSSQDEIRNWES 180
           SDLKI TELPDIKTWKSGSRSCSSWS EGEGDG YRPLFSKRKHI  NLSSQDEI+NWES
Sbjct: 121 SDLKIATELPDIKTWKSGSRSCSSWS-EGEGDGLYRPLFSKRKHIAKNLSSQDEIQNWES 180

Query: 181 PSAIHASKLSKGDDEQTFSTAKYLSAPFQDKKMGKNSHKVVDEIQNWELPSEIEASKWSK 240
           PSAIH SKLSKGDDEQTFSTAKYLSAPFQDKKM KNSHKV  EIQNWELPSEIEASKW+K
Sbjct: 181 PSAIHTSKLSKGDDEQTFSTAKYLSAPFQDKKMSKNSHKVESEIQNWELPSEIEASKWTK 240

Query: 241 DDENSRTKSCILGKVRGASSKWSEYITEEESCGGRNEENMAREQGMDVLKMMINEEIVED 300
           DDENSRTKSCILGKVRGASSKWSEYITEEE+CGGRNEENMAREQGMD+LK MIN+EIVED
Sbjct: 241 DDENSRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREQGMDILK-MINDEIVED 300

Query: 301 DVHPDFK 308
           D+HPDFK
Sbjct: 301 DIHPDFK 305

BLAST of Chy3G054560 vs. ExPASy TrEMBL
Match: A0A6J1FH51 (MRN complex-interacting protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445345 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 7.6e-87
Identity = 190/314 (60.51%), Postives = 220/314 (70.06%), Query Frame = 0

Query: 1   MATIFIAVQCFQCSIMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPIAKDVRKFVQSFN 60
           M+TIFIAVQCFQCS MQVKQQR+SGNKWICAVCN+KQSVQKVFARAP+AKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYANEQANVDELIDGETVDDDKLVCSGRRKRRNDWSDYLDPVEDRSHSGKENEGELE 120
           MSRKYA+EQ  VDE++D E VD+D+L  + +RKRR+DWS+YLD  EDRS +G+ENE EL 
Sbjct: 61  MSRKYADEQTKVDEILDEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDL---KIMTELPDIKTWKSGSRSCSSWSEEGEGDGFYRPLFSKRKHITNNLSSQDEIRN 180
           SD    K +TELP+ KT K  S SCSS  E  EG  FYRP+F KR HI  N         
Sbjct: 121 SDFADGKFVTELPEEKTRKHCSTSCSSRPEGVEGKRFYRPVFPKRTHIAKN--------- 180

Query: 181 WESPSAIHASKLSKG---DDEQTFSTAK-YLSAPFQDKKMGKNSHKVVDEIQNWELPSEI 240
               SAI ASK  KG   DDE+    AK +LS+               DEI+NWE PS  
Sbjct: 181 ----SAIQASKWRKGVREDDEKVSLKAKHHLSSK--------------DEIRNWESPS-- 240

Query: 241 EASKWSKDDENSRTKSCILGKVRGASSKWSEYITEEESCGGRNEENMAREQGMDVLKMMI 300
                SKDDE+    +CIL KV G SSKWSEYITE+++CGGR  ENM  EQ MD LKM+ 
Sbjct: 241 -----SKDDES----ACILAKVGGPSSKWSEYITEDDNCGGRKGENMGTEQDMDTLKMIT 276

Query: 301 NEEIVEDDVHPDFK 308
           N+EIVEDD+HPDFK
Sbjct: 301 NDEIVEDDIHPDFK 276

BLAST of Chy3G054560 vs. ExPASy TrEMBL
Match: A0A6J1JWE4 (MRN complex-interacting protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488952 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 7.8e-84
Identity = 187/314 (59.55%), Postives = 218/314 (69.43%), Query Frame = 0

Query: 1   MATIFIAVQCFQCSIMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPIAKDVRKFVQSFN 60
           M+TIFIAVQCFQCS MQVKQQR+SGNKWICAVCN+KQSVQKVFARAP+AKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYANEQANVDELIDGETVDDDKLVCSGRRKRRNDWSDYLDPVEDRSHSGKENEGELE 120
           MSRKYA+EQ  VDE+ D E VD+D+L  + +RKRR+DWS+YLD  EDRS +G+ENE EL 
Sbjct: 61  MSRKYADEQTKVDEIFDEEIVDEDQLDFNEKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDL---KIMTELPDIKTWKSGSRSCSSWSEEGEGDGFYRPLFSKRKHITNNLSSQDEIRN 180
           SD    KI+TELP+ KT K  S SCS+  E GEG  FYRP+F KR HI  N         
Sbjct: 121 SDFADGKIVTELPEEKTRKHCSTSCSNRPESGEGKIFYRPVFPKRTHIAKN--------- 180

Query: 181 WESPSAIHASKLSKG---DDEQTFSTAK-YLSAPFQDKKMGKNSHKVVDEIQNWELPSEI 240
               SAI ASK SKG   DDE+    AK +LS+               DEI+NWE     
Sbjct: 181 ----SAIQASKWSKGVREDDEKVSLKAKHHLSSK--------------DEIRNWE----- 240

Query: 241 EASKWSKDDENSRTKSCILGKVRGASSKWSEYITEEESCGGRNEENMAREQGMDVLKMMI 300
             S  +KDDEN+ +K        G  SKWSEYITE+++CGGR  ENM  EQ MD LKM+I
Sbjct: 241 --SLSTKDDENACSKV-------GGPSKWSEYITEDDNCGGRKGENMGTEQDMDTLKMII 273

Query: 301 NEEIVEDDVHPDFK 308
           N+EIVEDD+HPDFK
Sbjct: 301 NDEIVEDDIHPDFK 273

BLAST of Chy3G054560 vs. NCBI nr
Match: XP_004141004.1 (MRN complex-interacting protein [Cucumis sativus] >KGN46102.1 hypothetical protein Csa_005258 [Cucumis sativus])

HSP 1 Score: 589 bits (1518), Expect = 1.02e-211
Identity = 289/307 (94.14%), Postives = 296/307 (96.42%), Query Frame = 0

Query: 1   MATIFIAVQCFQCSIMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPIAKDVRKFVQSFN 60
           MATIFIAVQCFQCS MQVKQQRKSGNKWICAVCNQKQSVQKVFARAP+AKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYANEQANVDELIDGETVDDDKLVCSGRRKRRNDWSDYLDPVEDRSHSGKENEGELE 120
           MSRKYANEQANVDELIDG  VDDDKLVCSGRRK R+DWSDYLDPVEDRSHSG+ENE ELE
Sbjct: 61  MSRKYANEQANVDELIDGGIVDDDKLVCSGRRKSRSDWSDYLDPVEDRSHSGRENEVELE 120

Query: 121 SDLKIMTELPDIKTWKSGSRSCSSWSEEGEGDGFYRPLFSKRKHITNNLSSQDEIRNWES 180
           SDLKI+TELPDIKTWKSGSRSCSSWSEEGEGDG YRPLFSKRKHI NNLSSQDEIRNWES
Sbjct: 121 SDLKIVTELPDIKTWKSGSRSCSSWSEEGEGDGLYRPLFSKRKHIANNLSSQDEIRNWES 180

Query: 181 PSAIHASKLSKGDDEQTFSTAKYLSAPFQDKKMGKNSHKVVDEIQNWELPSEIEASKWSK 240
           PSAIHASKLSKGDDEQT STAKYLSAPFQDKKMGKN HKV DEIQNWELPSEIEASKWSK
Sbjct: 181 PSAIHASKLSKGDDEQTLSTAKYLSAPFQDKKMGKNGHKVEDEIQNWELPSEIEASKWSK 240

Query: 241 DDENSRTKSCILGKVRGASSKWSEYITEEESCGGRNEENMAREQGMDVLKMMINEEIVED 300
           DDEN RTKSCILGKVRGASSKWSEYITEEE+CGGRNEENMARE+GMDVLKMMINEEIVED
Sbjct: 241 DDENLRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREEGMDVLKMMINEEIVED 300

Query: 301 DVHPDFK 307
           D+HPDFK
Sbjct: 301 DIHPDFK 307

BLAST of Chy3G054560 vs. NCBI nr
Match: XP_008456719.1 (PREDICTED: UPF0544 protein C5orf45 homolog [Cucumis melo] >KAA0031637.1 UPF0544 protein C5orf45-like protein [Cucumis melo var. makuwa] >TYK04473.1 UPF0544 protein C5orf45-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 566 bits (1458), Expect = 1.33e-202
Identity = 280/307 (91.21%), Postives = 291/307 (94.79%), Query Frame = 0

Query: 1   MATIFIAVQCFQCSIMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPIAKDVRKFVQSFN 60
           MATIFIAVQCFQCS MQVKQQRKSGNKWICAVCN+KQSVQKVFARAP+AKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYANEQANVDELIDGETVDDDKLVCSGRRKRRNDWSDYLDPVEDRSHSGKENEGELE 120
           MSRKYANEQANVD+LI G  VDDDKL CSGRRKRRNDWS+YLDP EDRSHSG+ENEGELE
Sbjct: 61  MSRKYANEQANVDDLIHGGIVDDDKLDCSGRRKRRNDWSEYLDPEEDRSHSGRENEGELE 120

Query: 121 SDLKIMTELPDIKTWKSGSRSCSSWSEEGEGDGFYRPLFSKRKHITNNLSSQDEIRNWES 180
           SDLKI TELPDIKTWKSGSRSCSSWSE GEGDG YRPLFSKRKHI  NLSSQDEI+NWES
Sbjct: 121 SDLKIATELPDIKTWKSGSRSCSSWSE-GEGDGLYRPLFSKRKHIAKNLSSQDEIQNWES 180

Query: 181 PSAIHASKLSKGDDEQTFSTAKYLSAPFQDKKMGKNSHKVVDEIQNWELPSEIEASKWSK 240
           PSAIH SKLSKGDDEQTFSTAKYLSAPFQDKKM KNSHKV  EIQNWELPSEIEASKW+K
Sbjct: 181 PSAIHTSKLSKGDDEQTFSTAKYLSAPFQDKKMSKNSHKVESEIQNWELPSEIEASKWTK 240

Query: 241 DDENSRTKSCILGKVRGASSKWSEYITEEESCGGRNEENMAREQGMDVLKMMINEEIVED 300
           DDENSRTKSCILGKVRGASSKWSEYITEEE+CGGRNEENMAREQGMD+LKM IN+EIVED
Sbjct: 241 DDENSRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREQGMDILKM-INDEIVED 300

Query: 301 DVHPDFK 307
           D+HPDFK
Sbjct: 301 DIHPDFK 305

BLAST of Chy3G054560 vs. NCBI nr
Match: XP_038885326.1 (MRN complex-interacting protein [Benincasa hispida])

HSP 1 Score: 480 bits (1235), Expect = 1.66e-168
Identity = 241/314 (76.75%), Postives = 270/314 (85.99%), Query Frame = 0

Query: 1   MATIFIAVQCFQCSIMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPIAKDVRKFVQSFN 60
           MATIFIAVQCFQCS MQVKQQRKSGN+WICAVCN+KQS+QKVFARA +AKDVRKFVQ+FN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNRWICAVCNEKQSLQKVFARASMAKDVRKFVQNFN 60

Query: 61  MSRKYANEQANVDELIDGETVDDDKLVCSGRRKRRNDWSDYLDPVEDRSHSGKENEGELE 120
           MSRKYA+EQA  DEL+DG  VD+DKL CS RRKRRNDWS+YLDP EDRSH+G+ENEGELE
Sbjct: 61  MSRKYADEQAKADELLDGGIVDEDKLDCSARRKRRNDWSEYLDPEEDRSHNGRENEGELE 120

Query: 121 S---DLKIMTELPDIKTWKSGSRSCSSWSEEGEGDGFYRPLFSKRKHITNNLSSQDEIRN 180
           S   D KI+TE+P++KT KSGS SCS WSE GEGDGFYRP+FSKRKHI NNLSSQDE+RN
Sbjct: 121 SESTDEKIVTEIPEVKTRKSGSTSCSRWSE-GEGDGFYRPIFSKRKHIANNLSSQDEVRN 180

Query: 181 WESPSAIHASKLSKGDDEQTFSTAKYLSAPFQDKKMGKNSHKVVDEIQNWELPSEIEASK 240
           WES S I   K SKG+DEQ  S AK LSAPFQDKKM KNSHK+ DEIQNWEL SEIEASK
Sbjct: 181 WESTSTIQTMKWSKGNDEQIISKAKNLSAPFQDKKMSKNSHKIADEIQNWELQSEIEASK 240

Query: 241 ----WSKDDENSRTKSCILGKVRGASSKWSEYITEEESCGGRNEENMAREQGMDVLKMMI 300
                SKDDENSRTK+ IL KVRG SSKWSEYITEE++C GRN ENMA +Q +D+LK +I
Sbjct: 241 GSKDMSKDDENSRTKTSILAKVRGPSSKWSEYITEEDNCRGRNGENMATDQCIDILKKII 300

Query: 301 NEEIVEDDVHPDFK 307
           N+EIV+DD+HPDFK
Sbjct: 301 NDEIVDDDIHPDFK 313

BLAST of Chy3G054560 vs. NCBI nr
Match: XP_022939429.1 (MRN complex-interacting protein isoform X1 [Cucurbita moschata])

HSP 1 Score: 335 bits (858), Expect = 9.65e-112
Identity = 190/314 (60.51%), Postives = 220/314 (70.06%), Query Frame = 0

Query: 1   MATIFIAVQCFQCSIMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPIAKDVRKFVQSFN 60
           M+TIFIAVQCFQCS MQVKQQR+SGNKWICAVCN+KQSVQKVFARAP+AKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYANEQANVDELIDGETVDDDKLVCSGRRKRRNDWSDYLDPVEDRSHSGKENEGELE 120
           MSRKYA+EQ  VDE++D E VD+D+L  + +RKRR+DWS+YLD  EDRS +G+ENE EL 
Sbjct: 61  MSRKYADEQTKVDEILDEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDL---KIMTELPDIKTWKSGSRSCSSWSEEGEGDGFYRPLFSKRKHITNNLSSQDEIRN 180
           SD    K +TELP+ KT K  S SCSS  E  EG  FYRP+F KR HI  N         
Sbjct: 121 SDFADGKFVTELPEEKTRKHCSTSCSSRPEGVEGKRFYRPVFPKRTHIAKN--------- 180

Query: 181 WESPSAIHASKLSKG---DDEQTFSTAKY-LSAPFQDKKMGKNSHKVVDEIQNWELPSEI 240
               SAI ASK  KG   DDE+    AK+ LS+               DEI+NWE PS  
Sbjct: 181 ----SAIQASKWRKGVREDDEKVSLKAKHHLSSK--------------DEIRNWESPS-- 240

Query: 241 EASKWSKDDENSRTKSCILGKVRGASSKWSEYITEEESCGGRNEENMAREQGMDVLKMMI 300
                SKDDE++    CIL KV G SSKWSEYITE+++CGGR  ENM  EQ MD LKM+ 
Sbjct: 241 -----SKDDESA----CILAKVGGPSSKWSEYITEDDNCGGRKGENMGTEQDMDTLKMIT 276

Query: 301 NEEIVEDDVHPDFK 307
           N+EIVEDD+HPDFK
Sbjct: 301 NDEIVEDDIHPDFK 276

BLAST of Chy3G054560 vs. NCBI nr
Match: XP_023549686.1 (MRN complex-interacting protein isoform X2 [Cucurbita pepo subsp. pepo] >XP_023549687.1 MRN complex-interacting protein isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334 bits (857), Expect = 1.47e-111
Identity = 190/316 (60.13%), Postives = 220/316 (69.62%), Query Frame = 0

Query: 1   MATIFIAVQCFQCSIMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPIAKDVRKFVQSFN 60
           M+TIFIAVQCFQCS MQVKQQR+SGNKWICAVCN+KQSVQKVFARAP+AKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYANEQANVDELIDGETVDDDKLVCSGRRKRRNDWSDYLDPVEDRSHSGKENEGELE 120
           MSRKYA+EQ  VDE++D E VD+D+L  + +RKRR+DWS+YLD  EDRS +G+ENE EL 
Sbjct: 61  MSRKYADEQTKVDEILDEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDL---KIMTELPDIKTWKSGSRSCSSWSEEGEGDGFYRPLFSKRKHITNNLSSQDEIRN 180
           SD    KI+TELP+ KT K  S SCSS  E GEG  FYRP+F KR HI  N         
Sbjct: 121 SDFTDGKIVTELPEEKTRKHCSTSCSSRPEGGEGKRFYRPVFPKRTHIAKN--------- 180

Query: 181 WESPSAIHASKLSKG--DDEQTFSTAKYLSAPFQDKKMGKNSHKVVDEIQNWELPSEIEA 240
               SAI ASK  KG  +D++  S    LS+               DEI+NWE  S+IEA
Sbjct: 181 ----SAIQASKWRKGVREDDEKVSLKANLSSK--------------DEIRNWESQSDIEA 240

Query: 241 SKWSK----DDENSRTKSCILGKVRGASSKWSEYITEEESCGGRNEENMAREQGMDVLKM 300
           SKWSK    DDEN+    CIL KV G S KWSEY+TEE+        NM  EQ MD LKM
Sbjct: 241 SKWSKGMSKDDENA----CILAKVGGPSPKWSEYMTEEDK-------NMGTEQDMDTLKM 278

Query: 301 MINEEIVEDDVHPDFK 307
           +IN+EIVEDD+HPDFK
Sbjct: 301 IINDEIVEDDIHPDFK 278

BLAST of Chy3G054560 vs. TAIR 10
Match: AT1G71760.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 84 Blast hits to 84 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 131.7 bits (330), Expect = 9.9e-31
Identity = 109/330 (33.03%), Postives = 158/330 (47.88%), Query Frame = 0

Query: 2   ATIFIAVQCFQCSIMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPIAKDVRKFVQSFNM 61
           +T+FIA+QC++CS MQVKQ++KS NKW+C +CNQKQSV+KVFA+   AK++R FVQSFNM
Sbjct: 3   STLFIALQCYECSTMQVKQKKKSSNKWVCVICNQKQSVKKVFAQGYKAKELRFFVQSFNM 62

Query: 62  SRKYANEQANV------DELIDGETVDDDKLVCSGRRKRRNDWSDYL--DPVEDRSHSGK 121
           SRK A+E+A+       +  ++GE  ++         K+R+DWS YL  D V DR     
Sbjct: 63  SRKVADEEAHAVGDSFPEVYVEGEVNEE-----VNGTKKRSDWSQYLDFDSVNDRRRLAG 122

Query: 122 ENEGELESDLKIMTELPD--------IKTWKSGSRSCSSWSEEGEGDGFYRPLFSKRKHI 181
           E     E D+KI+TE+P          K   +G  S ++  E  + +  ++P FS+R   
Sbjct: 123 E-----EDDVKIVTEMPSNMFKRPKLNKESNAGGSSSNTGGENKDSNEIFKPSFSRR--- 182

Query: 182 TNNLSSQDEIRNWESPSAIHASKLSKGDDEQTFSTAKYLSAPFQDKKMGKNSHKVVDEIQ 241
                                  + K D    F + K  SA +       +S++VV    
Sbjct: 183 ----------------------SIKKPD----FRSGKRSSATYVGHISAFSSNEVVTR-- 242

Query: 242 NWELPSEIEASKWSKDDENSRTKSCILGKVRGASSKWSEYITEEES-------CGGRNEE 301
                         KD E    +S    +V   +SKW  Y+ ++E         G +   
Sbjct: 243 -------------KKDMEERNLES---ERVTKPASKWDAYLIDDEGEHQAPPRFGVKKAL 275

Query: 302 NMAREQGMDVLKMMINEE--IVEDDVHPDF 307
                 G D   M IN E  IV+D+VHPDF
Sbjct: 303 KDDEVGGWDRAVMEINTEYQIVDDEVHPDF 275

BLAST of Chy3G054560 vs. TAIR 10
Match: AT1G71760.1 (unknown protein; Has 92 Blast hits to 92 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-28
Identity = 97/268 (36.19%), Postives = 139/268 (51.87%), Query Frame = 0

Query: 2   ATIFIAVQCFQCSIMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPIAKDVRKFVQSFNM 61
           +T+FIA+QC++CS MQVKQ++KS NKW+C +CNQKQSV+KVFA+   AK++R FVQSFNM
Sbjct: 3   STLFIALQCYECSTMQVKQKKKSSNKWVCVICNQKQSVKKVFAQGYKAKELRFFVQSFNM 62

Query: 62  SRKYANEQANV------DELIDGETVDDDKLVCSGRRKRRNDWSDYL--DPVEDRSHSGK 121
           SRK A+E+A+       +  ++GE  ++         K+R+DWS YL  D V DR     
Sbjct: 63  SRKVADEEAHAVGDSFPEVYVEGEVNEE-----VNGTKKRSDWSQYLDFDSVNDRRRLAG 122

Query: 122 ENEGELESDLKIMTELPD--------IKTWKSGSRSCSSWSEEGEGDGFYRPLFSKRKHI 181
           E     E D+KI+TE+P          K   +G  S ++  E  + +  ++P FS+R   
Sbjct: 123 E-----EDDVKIVTEMPSNMFKRPKLNKESNAGGSSSNTGGENKDSNEIFKPSFSRRSIK 182

Query: 182 TNNLSSQD--------EIRNWESPSAIHASKLSKGDDEQTFSTAKYLSAP-FQDKKMGKN 241
             +  S +        E RN ES         SK D        ++ + P F  KK  K+
Sbjct: 183 KPDFRSDEVVTRKKDMEERNLESERV--TKPASKWDAYLIDDEGEHQAPPRFGVKKALKD 242

Query: 242 SHKVVDEIQNWE-LPSEIEASKWSKDDE 244
                DE+  W+    EI       DDE
Sbjct: 243 -----DEVGGWDRAVMEINTEYQIVDDE 253

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q32PP13.0e-0824.92MRN complex-interacting protein OS=Danio rerio OX=7955 GN=mrnip PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KCJ31.7e-16394.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052770 PE=4 SV=1[more]
A0A5D3BXL11.5e-15691.21UPF0544 protein C5orf45-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3C3H71.5e-15691.21UPF0544 protein C5orf45 homolog OS=Cucumis melo OX=3656 GN=LOC103496578 PE=4 SV=... [more]
A0A6J1FH517.6e-8760.51MRN complex-interacting protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1JWE47.8e-8459.55MRN complex-interacting protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
Match NameE-valueIdentityDescription
XP_004141004.11.02e-21194.14MRN complex-interacting protein [Cucumis sativus] >KGN46102.1 hypothetical prote... [more]
XP_008456719.11.33e-20291.21PREDICTED: UPF0544 protein C5orf45 homolog [Cucumis melo] >KAA0031637.1 UPF0544 ... [more]
XP_038885326.11.66e-16876.75MRN complex-interacting protein [Benincasa hispida][more]
XP_022939429.19.65e-11260.51MRN complex-interacting protein isoform X1 [Cucurbita moschata][more]
XP_023549686.11.47e-11160.13MRN complex-interacting protein isoform X2 [Cucurbita pepo subsp. pepo] >XP_0235... [more]
Match NameE-valueIdentityDescription
AT1G71760.29.9e-3133.03unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G71760.11.2e-2836.19unknown protein; Has 92 Blast hits to 92 proteins in 41 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032739MRN complex-interacting proteinPFAMPF15749MRNIPcoord: 8..146
e-value: 6.7E-17
score: 62.2
IPR032739MRN complex-interacting proteinPANTHERPTHR15863MRN COMPLEX-INTERACTING PROTEINcoord: 1..306

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G054560.1Chy3G054560.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007095 mitotic G2 DNA damage checkpoint signaling
cellular_component GO:0005634 nucleus
molecular_function GO:0003682 chromatin binding