Chy3G053580 (gene) Cucumber (hystrix) v1

Overview
NameChy3G053580
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Description40S ribosomal protein S15a-2-like
LocationchrH03: 5250721 .. 5254417 (+)
RNA-Seq ExpressionChy3G053580
SyntenyChy3G053580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGGAGGATTTTGAACGACGCATTAAGAGCTATTGTCAATGCTGAGAGGAGGGGAAACTCTATGGTGGAACTCAAACCCATTTCCACTGTCATGGCTTCTTTTCTTAAAGTCATGAAAGATCACGGTAAGACCTGTGTCTCTCTAGATTTTTGGGTGCTGAACTGACATGGTTTTTTACCTTTTCTTACGCCCTATTTATTTGCTTAGAATTTCTGCTCCGGTGTTTTACTTCATGCTGTCAAGTGATAGATTCATATTGGCATTTCCTTCATGTTGAGATCATTCGTGATTACTTCGTATATTTTTCTACGTCGTTGATCTTTTTTTTTTTTCCCCTGGATTTGGTTGTTTTTGTGAATATACTGTTAATGAGTAAACATTTCAAGTGCAAAATGATTTCCCTATCTCCTTTTGATATCCAAAAGGAGGAAAAAAGCTTAGTTGTTCAAGTTGCCTCCACTGGGTTTTACTGTGATTGTATTGCTATTTGTTGTTATGTAGTTGTTATTGACTAGTGCTGTAAACCAAATGAGAGAATTTTATTAATGTTTAAAAGTTGTCAATACAAGAAGACAAGCAAAAGCAAACTAATGCTAATCCTAATCCTAATTAATAAAAGAAACTTAATCTTAATCCTAAATAATAAAAGAAACTAATTCTAATCCTAATAAACTAAAGAAACTAATCCTAATCCTACTCCTCATCTTAACCCTAATAAATTAAGGATTTGACCATAATTCCTTATTCCTACTACATCATTTCTATCCCTCCCAAAGAAAAAAAAATTTGTCCTCGAGTTTTAAAATGGAAATGAAGGTAAAATAAAAATGTAAACCGGTTGAATGGAGGCATATCGAAACATCCAACATCAATAATATCCATTTAGTATGGTTGTGGACATTTAAAGTTAATTCAAAAAAAGGAAAATTGGTGAAAGAATCGTGAAAACATCCACTTCGTATTGCTACTTCTTTTTCTGTCATTGGTTCTTGCGTAAATTGCGATCCATTCAAGATTAGTATAGCCCTAAATTCATCTTCATCTCCGTAGAGAATTGTTTCTTCATGTTGCGTTCAAGTAAACAAAAGATACCATCGGTAGAGCTTTTGGTAGACCGCAAGCTTCAGGTCAATGTCTTCGCTGATAGAATGGTTGTTTGCTCCACCTCTTTGAAGGTTGTCAAGGGGTCACTGCCGGTAGGCCTTCTTCCCGCCATCAGGTCCAAGTTTCTTGGACTCTGATACCAATTTGAAAACCAAATTAGAGAATTTTATTAATGTTTAAAAGTTGTCAATACAAGAAGACAAGTTTTCTATTTATAGCAAAAGCAAACTAATCCTAATCCTAATTAATAAAAGAAACTTAATCCTAATCCCTAATAATAAAAGAAACTAATTATAACCCTAATAAACCAAAGAAACTAATCCTAGTCCTAATAAATTAAGGATTTGACCATAATACCCTATTCCTACTACATCGACTAGCCTAGAATGACTGGAAGTTAGAATTTTTGGAAAGCTTTGATTGTGGAGATATAAACCTTTTATACTCCATTTCACTATTTTTTGTCATAGCGGAAAAGTTGGAAACTACTATCATGAAATCAAATACAATGAACCTTCAATCAACTTCTGCTCATGAGGATTCTGAATTGTTTTTTTATTTTTATAAATTCCATTACTTTTTACTTGATTACACGTGTTTCTCCCTGGGCCTAATCGTAGATTTGTTGCTGCTGTGAAATTTGAGTGTTAAACCTCTTTTGTGATGTACAATATGCAGAAAATTGAAACAACCTTGGGCTTTACACTCTAGATTATAACTTCATCCAGCTCCTTATTAATTAGAATGCATCCTGGCATGATTTTACTTCTATGTTTACCATGACAGAGGCTATAATTGAAATGACCCTGCCTATATCCTTAATTCATTGAAAATTTTCCAGTGTGTATTAGCTTTGACAATATGGTAAATGAGTCCTTCCTGCTTCCAAGCTCAATGGATCATATTATTCTAGTTTTACTAGGATCTAACGCAGGGGGAAGGAAGTTTGTTGAATACGTTTAAATTGAAATTTATTTCTTCAATTTAACTAATCATCTCATATTGAATTGACCTTTTGTAGTCATAAAAAAATAGGATTGAATTGCAAGTCACTTGTAGTCCAAAAGTTTGATATCTGCCTATCCTAGGGTGCTATTACCGTTGGAAACCATTGTAATTCTAATGGAACAGGGAGGGGAAAATCCGAATATTAGCAATATTGGAAGTTATATAATGTGAACGCATTAGTTTGCTGGTTGGTATGTGTCTTTTCCATCAGAAAGTTTATGAAAATATAAATAGGTATACCACTTTCTTTTCCAGACTTTGCTTATTTGTTATTTTGATGTCATTGAGTTGTAAAATATCCATCTTCACCATTAATATTGATGGTTGTAATATTACAACCGTCAAGGTGAGACTAGTCGAGGTGCGCATAAACTGGCCCGGACATTCACGGATATTAAAAAAGAAAAAAACATTGACTTTTGTAATGCTACTGATATTTTCTTAAAAATTAACAATAAATGTATGCTGTTACTGTAAAGGGTTTCATATTAATGATCTACTCCGTAATTTCATCTCATTTATGGAGTCTTCAAATTTTATGTAAAGGGTATATCAAGGACTATCAAGTTCACAATCCGCAAAGAGTCGGAAGGATAACAGTTGAGCTGCAAGGTAGGATCAAGGATTGCAAGGCAATCACCTACAGGCAGGACATCAAGGCAAAGGATATTGAAGCTTACAGTTTACGAACACTTCCAACACGTCAGGTGTTTTAATTATTATATTTTGCTTTCAAATCTGAATGGATTCGTCAGTCAATCTTTATTATATCTAGTTGTCCTCTTTGGTCATTTGTCTACCTAGGTTGAATCAACTCAACCAATATGGTCAATATGCATGCCATTAAGTTAAGATTATAGTCTGGCAAAGACAAAATAGGATCATAATTCAAAATTTAGAGACAAATGATTAAGGCCCCGTTTGGTGACCAATTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTCTGTTTTTTAAAGTTAAGCCTATAAACATAACTTTCACCCAACTTTCTTCCTTTGTTATTTATGTTTTACCAATAGTTTAGAAAACCAAGCCAATTTTTTAAAACAAAAATAAAAAAGTAGTTTTAAAAAATTGTTTTTATTTTTGGAATTTGGCTAAGAATTCAACCATTGTACTTTGGGAATATGCAAATCATTTTAAGAAATGGAGAGGAATTGGACTTAATTTTCAAAAACTAAAAACAAAAAACAAAATAGTTTCCAAGGGCCTAATTTTTACTTTTTGAAGTTGAAAAGCTAAATGAACATAACCGTCAAAATTTTATGACCACACTCTTGTTGCTAAGAAACTTGGCCACGTAAGTCTTGTTTATTTAACCAATTTCTCACTCTCCAACCTCTCCGCTTTGTCTGCAGTGGGGCAATGTTATGATTTCTAATTAGCCTATTCTAAGGATAAATACTTGGAACTGGTTATTTTGTTTATATTAACCAAATATTTTACTTTCGTCTCTCCAGTGGGGTTATGTTGTGATTACTACTCCAGAAGGCATCTTGGATCATGAAGAGGCAATGAAAAGGAATGTTGGGGGTCAGGTTCTTGGATTTTTTCATTAG

mRNA sequence

ATGGGAAGGAGGATTTTGAACGACGCATTAAGAGCTATTGTCAATGCTGAGAGGAGGGGAAACTCTATGGTGGAACTCAAACCCATTTCCACTGTCATGGCTTCTTTTCTTAAAGTCATGAAAGATCACGGGTATATCAAGGACTATCAAGTTCACAATCCGCAAAGAGTCGGAAGGATAACAGTTGAGCTGCAAGGTAGGATCAAGGATTGCAAGGCAATCACCTACAGGCAGGACATCAAGGCAAAGGATATTGAAGCTTACAGTTTACGAACACTTCCAACACGTCAGTGGGGTTATGTTGTGATTACTACTCCAGAAGGCATCTTGGATCATGAAGAGGCAATGAAAAGGAATGTTGGGGGTCAGGTTCTTGGATTTTTTCATTAG

Coding sequence (CDS)

ATGGGAAGGAGGATTTTGAACGACGCATTAAGAGCTATTGTCAATGCTGAGAGGAGGGGAAACTCTATGGTGGAACTCAAACCCATTTCCACTGTCATGGCTTCTTTTCTTAAAGTCATGAAAGATCACGGGTATATCAAGGACTATCAAGTTCACAATCCGCAAAGAGTCGGAAGGATAACAGTTGAGCTGCAAGGTAGGATCAAGGATTGCAAGGCAATCACCTACAGGCAGGACATCAAGGCAAAGGATATTGAAGCTTACAGTTTACGAACACTTCCAACACGTCAGTGGGGTTATGTTGTGATTACTACTCCAGAAGGCATCTTGGATCATGAAGAGGCAATGAAAAGGAATGTTGGGGGTCAGGTTCTTGGATTTTTTCATTAG

Protein sequence

MGRRILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRITVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNVGGQVLGFFH*
Homology
[Close]
BLAST of Chy3G053580 vs. ExPASy Swiss-Prot
Match: O82205 (40S ribosomal protein S15a-2 OS=Arabidopsis thaliana OX=3702 GN=RPS15AB PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.9e-57
Identity = 101/129 (78.29%), Postives = 119/129 (92.25%), Query Frame = 0 

Query: 1   MGRRILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60
           MGRRILNDALR IVNAE+RG + VELKP+STVM+SFLK+MK+ GYIK++QVH+P RVGRI
Sbjct: 1   MGRRILNDALRTIVNAEKRGKASVELKPVSTVMSSFLKIMKEKGYIKNFQVHDPHRVGRI 60

Query: 61  TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV 120
           TV+LQGR+ DCKA+TYRQD+KA +I  Y+ RTLPTRQWGY+VITTP+GILDHEEA+KRNV
Sbjct: 61  TVDLQGRVNDCKALTYRQDVKANEIGQYTERTLPTRQWGYIVITTPDGILDHEEAIKRNV 120

Query: 121 GGQVLGFFH 130
           GGQVLGFFH
Sbjct: 121 GGQVLGFFH 129

[Close]
BLAST of Chy3G053580 vs. ExPASy Swiss-Prot
Match: Q9M0E0 (40S ribosomal protein S15a-5 OS=Arabidopsis thaliana OX=3702 GN=RPS15AE PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.5e-57
Identity = 102/129 (79.07%), Postives = 121/129 (93.80%), Query Frame = 0 

Query: 1   MGRRILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60
           MGRRILNDALR IVNAERRG + VELKPISTVM+SFL++MK+ GYIK++QV++P RVGRI
Sbjct: 1   MGRRILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRI 60

Query: 61  TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV 120
           TV+LQGR+ DCKA+TYRQD++AK+IE Y+ RTLPTRQWGYVVITTP+GILDHEEA+KRNV
Sbjct: 61  TVDLQGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNV 120

Query: 121 GGQVLGFFH 130
           GGQVLGFF+
Sbjct: 121 GGQVLGFFY 129

[Close]
BLAST of Chy3G053580 vs. ExPASy Swiss-Prot
Match: Q9AT34 (40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 142.1 bits (357), Expect = 4.4e-33
Identity = 63/125 (50.40%), Postives = 92/125 (73.60%), Query Frame = 0 

Query: 5   ILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRITVEL 64
           +LNDAL+++ NAE+RG   V ++P S V+  FL VM+ HGYI +++  +  R G+I VEL
Sbjct: 6   VLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGKIVVEL 65

Query: 65  QGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNVGGQV 124
            GR+  C  I+ R D+  K+IE ++ R LP+RQ+GY+V+TT  GI+DHEEA ++NVGG+V
Sbjct: 66  NGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 125

Query: 125 LGFFH 130
           LGFF+
Sbjct: 126 LGFFY 130

[Close]
BLAST of Chy3G053580 vs. ExPASy Swiss-Prot
Match: P42798 (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 5.7e-33
Identity = 63/125 (50.40%), Postives = 92/125 (73.60%), Query Frame = 0 

Query: 5   ILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRITVEL 64
           +LNDAL+++ NAE+RG   V ++P S V+  FL VM+ HGYI +++  +  R G+I VEL
Sbjct: 6   VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVEL 65

Query: 65  QGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNVGGQV 124
            GR+  C  I+ R D+  K+IE ++ R LP+RQ+GY+V+TT  GI+DHEEA ++NVGG+V
Sbjct: 66  NGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 125

Query: 125 LGFFH 130
           LGFF+
Sbjct: 126 LGFFY 130

[Close]
BLAST of Chy3G053580 vs. ExPASy Swiss-Prot
Match: Q00332 (40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 141.7 bits (356), Expect = 5.7e-33
Identity = 63/125 (50.40%), Postives = 92/125 (73.60%), Query Frame = 0 

Query: 5   ILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRITVEL 64
           +LNDAL+++ NAE+RG   V ++P S V+  FL VM+ HGYI +++  +  R G+I VEL
Sbjct: 6   VLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVEL 65

Query: 65  QGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNVGGQV 124
            GR+  C  I+ R D+  K+IE ++ R LP+RQ+GY+V+TT  GI+DHEEA ++NVGG+V
Sbjct: 66  NGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 125

Query: 125 LGFFH 130
           LGFF+
Sbjct: 126 LGFFY 130

[Close]
BLAST of Chy3G053580 vs. ExPASy TrEMBL
Match: A0A0A0KDZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G041710 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.8e-67
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0 

Query: 1   MGRRILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60
           MGRRILNDALR+IVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI
Sbjct: 1   MGRRILNDALRSIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60

Query: 61  TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV 120
           TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV
Sbjct: 61  TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV 120

Query: 121 GGQVLGFFH 130
           GGQVLGFFH
Sbjct: 121 GGQVLGFFH 129

[Close]
BLAST of Chy3G053580 vs. ExPASy TrEMBL
Match: A0A5D3D2U5 (40S ribosomal protein S15a-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00640 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.9e-65
Identity = 124/129 (96.12%), Postives = 126/129 (97.67%), Query Frame = 0 

Query: 1   MGRRILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60
           MGRRILNDALRAIVNAERRG SMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI
Sbjct: 1   MGRRILNDALRAIVNAERRGKSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60

Query: 61  TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV 120
           TV+LQGRIKDCKA+TYRQDIKAKDIEAY LRTLPT QWGYVVITTPEGILDHEEAMKRNV
Sbjct: 61  TVDLQGRIKDCKALTYRQDIKAKDIEAYRLRTLPTLQWGYVVITTPEGILDHEEAMKRNV 120

Query: 121 GGQVLGFFH 130
           GGQVLGFFH
Sbjct: 121 GGQVLGFFH 129

[Close]
BLAST of Chy3G053580 vs. ExPASy TrEMBL
Match: A0A1S3BDC0 (40S ribosomal protein S15a-2-like OS=Cucumis melo OX=3656 GN=LOC103488655 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.9e-65
Identity = 124/129 (96.12%), Postives = 126/129 (97.67%), Query Frame = 0 

Query: 1   MGRRILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60
           MGRRILNDALRAIVNAERRG SMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI
Sbjct: 1   MGRRILNDALRAIVNAERRGKSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60

Query: 61  TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV 120
           TV+LQGRIKDCKA+TYRQDIKAKDIEAY LRTLPT QWGYVVITTPEGILDHEEAMKRNV
Sbjct: 61  TVDLQGRIKDCKALTYRQDIKAKDIEAYRLRTLPTLQWGYVVITTPEGILDHEEAMKRNV 120

Query: 121 GGQVLGFFH 130
           GGQVLGFFH
Sbjct: 121 GGQVLGFFH 129

[Close]
BLAST of Chy3G053580 vs. ExPASy TrEMBL
Match: A0A6J1D967 (40S ribosomal protein S15a-5-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018536 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.1e-62
Identity = 118/129 (91.47%), Postives = 125/129 (96.90%), Query Frame = 0 

Query: 1   MGRRILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60
           MGRRILNDALR+IVNAERRG SMVELKPISTVM+SFLKVMKDHGYIKDYQV++P RVGRI
Sbjct: 1   MGRRILNDALRSIVNAERRGKSMVELKPISTVMSSFLKVMKDHGYIKDYQVYDPHRVGRI 60

Query: 61  TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV 120
           TVELQGRIKDCKAIT+RQDIKAKDIEAY LRTLPT QWGYVVITTPEGILDHEEAM+RNV
Sbjct: 61  TVELQGRIKDCKAITHRQDIKAKDIEAYRLRTLPTHQWGYVVITTPEGILDHEEAMRRNV 120

Query: 121 GGQVLGFFH 130
           GGQVLG+FH
Sbjct: 121 GGQVLGYFH 129

[Close]
BLAST of Chy3G053580 vs. ExPASy TrEMBL
Match: A0A6J1H6L4 (40S ribosomal protein S15a-2-like OS=Cucurbita moschata OX=3662 GN=LOC111460589 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 8.8e-61
Identity = 114/129 (88.37%), Postives = 125/129 (96.90%), Query Frame = 0 

Query: 1   MGRRILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60
           MGRRILNDALRAIVNAERRG + VELKPIS+VM++FLKVMKDHGYI D+QVH+PQRVGRI
Sbjct: 1   MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRI 60

Query: 61  TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV 120
           TVELQGRIKDCKA+TYRQDIKAK+IEAY +RTLPTRQWGYVVITTPEGILDHEEA+KRNV
Sbjct: 61  TVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGYVVITTPEGILDHEEAIKRNV 120

Query: 121 GGQVLGFFH 130
           GGQVLG+FH
Sbjct: 121 GGQVLGYFH 129

[Close]
BLAST of Chy3G053580 vs. NCBI nr
Match: XP_004140873.1 (40S ribosomal protein S15a-2 [Cucumis sativus] >KGN45986.1 hypothetical protein Csa_004829 [Cucumis sativus])

HSP 1 Score: 262 bits (669), Expect = 3.50e-88
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0 

Query: 1   MGRRILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60
           MGRRILNDALR+IVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI
Sbjct: 1   MGRRILNDALRSIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60

Query: 61  TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV 120
           TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV
Sbjct: 61  TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV 120

Query: 121 GGQVLGFFH 129
           GGQVLGFFH
Sbjct: 121 GGQVLGFFH 129

[Close]
BLAST of Chy3G053580 vs. NCBI nr
Match: XP_008445702.1 (PREDICTED: 40S ribosomal protein S15a-2-like [Cucumis melo] >KAA0033107.1 40S ribosomal protein S15a-2-like [Cucumis melo var. makuwa] >TYK17126.1 40S ribosomal protein S15a-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 254 bits (649), Expect = 3.94e-85
Identity = 124/129 (96.12%), Postives = 126/129 (97.67%), Query Frame = 0 

Query: 1   MGRRILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60
           MGRRILNDALRAIVNAERRG SMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI
Sbjct: 1   MGRRILNDALRAIVNAERRGKSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60

Query: 61  TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV 120
           TV+LQGRIKDCKA+TYRQDIKAKDIEAY LRTLPT QWGYVVITTPEGILDHEEAMKRNV
Sbjct: 61  TVDLQGRIKDCKALTYRQDIKAKDIEAYRLRTLPTLQWGYVVITTPEGILDHEEAMKRNV 120

Query: 121 GGQVLGFFH 129
           GGQVLGFFH
Sbjct: 121 GGQVLGFFH 129

[Close]
BLAST of Chy3G053580 vs. NCBI nr
Match: XP_038884441.1 (40S ribosomal protein S15a-5-like [Benincasa hispida])

HSP 1 Score: 250 bits (639), Expect = 1.32e-83
Identity = 122/129 (94.57%), Postives = 126/129 (97.67%), Query Frame = 0 

Query: 1   MGRRILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60
           MGRRILNDALRAIVNAERRG SMVELKPISTVM+SFLKVMKDHGYIKD+QVH+PQRVGRI
Sbjct: 1   MGRRILNDALRAIVNAERRGKSMVELKPISTVMSSFLKVMKDHGYIKDFQVHDPQRVGRI 60

Query: 61  TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV 120
           TVELQGRIKDCKAIT+RQDIKAKDIEAY LRTLPT QWGYVVITTPEGILDHEEAMKRNV
Sbjct: 61  TVELQGRIKDCKAITHRQDIKAKDIEAYRLRTLPTHQWGYVVITTPEGILDHEEAMKRNV 120

Query: 121 GGQVLGFFH 129
           GGQVLGFFH
Sbjct: 121 GGQVLGFFH 129

[Close]
BLAST of Chy3G053580 vs. NCBI nr
Match: XP_022150338.1 (40S ribosomal protein S15a-5-like isoform X2 [Momordica charantia])

HSP 1 Score: 244 bits (623), Expect = 3.64e-81
Identity = 118/129 (91.47%), Postives = 125/129 (96.90%), Query Frame = 0 

Query: 1   MGRRILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60
           MGRRILNDALR+IVNAERRG SMVELKPISTVM+SFLKVMKDHGYIKDYQV++P RVGRI
Sbjct: 1   MGRRILNDALRSIVNAERRGKSMVELKPISTVMSSFLKVMKDHGYIKDYQVYDPHRVGRI 60

Query: 61  TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV 120
           TVELQGRIKDCKAIT+RQDIKAKDIEAY LRTLPT QWGYVVITTPEGILDHEEAM+RNV
Sbjct: 61  TVELQGRIKDCKAITHRQDIKAKDIEAYRLRTLPTHQWGYVVITTPEGILDHEEAMRRNV 120

Query: 121 GGQVLGFFH 129
           GGQVLG+FH
Sbjct: 121 GGQVLGYFH 129

[Close]
BLAST of Chy3G053580 vs. NCBI nr
Match: KAG6592876.1 (40S ribosomal protein S15a-5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241 bits (616), Expect = 4.26e-80
Identity = 115/129 (89.15%), Postives = 125/129 (96.90%), Query Frame = 0 

Query: 1   MGRRILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60
           MGRRILNDALRAIVNAERRG + VELKPIS+VM+SFLKVMKDHGYI D+QVH+PQRVGRI
Sbjct: 1   MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRI 60

Query: 61  TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV 120
           TVELQGRIKDCKA+TYRQDIKAK+IEAY +RTLPTRQWGYVVITTPEGILDHEEA+KRNV
Sbjct: 61  TVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGYVVITTPEGILDHEEAIKRNV 120

Query: 121 GGQVLGFFH 129
           GGQVLG+FH
Sbjct: 121 GGQVLGYFH 129

[Close]
BLAST of Chy3G053580 vs. TAIR 10
Match: AT2G19720.1 (ribosomal protein S15A B )

HSP 1 Score: 223.0 bits (567), Expect = 1.4e-58
Identity = 101/129 (78.29%), Postives = 119/129 (92.25%), Query Frame = 0 

Query: 1   MGRRILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60
           MGRRILNDALR IVNAE+RG + VELKP+STVM+SFLK+MK+ GYIK++QVH+P RVGRI
Sbjct: 1   MGRRILNDALRTIVNAEKRGKASVELKPVSTVMSSFLKIMKEKGYIKNFQVHDPHRVGRI 60

Query: 61  TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV 120
           TV+LQGR+ DCKA+TYRQD+KA +I  Y+ RTLPTRQWGY+VITTP+GILDHEEA+KRNV
Sbjct: 61  TVDLQGRVNDCKALTYRQDVKANEIGQYTERTLPTRQWGYIVITTPDGILDHEEAIKRNV 120

Query: 121 GGQVLGFFH 130
           GGQVLGFFH
Sbjct: 121 GGQVLGFFH 129

[Close]
BLAST of Chy3G053580 vs. TAIR 10
Match: AT4G29430.1 (ribosomal protein S15A E )

HSP 1 Score: 222.6 bits (566), Expect = 1.8e-58
Identity = 102/129 (79.07%), Postives = 121/129 (93.80%), Query Frame = 0 

Query: 1   MGRRILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60
           MGRRILNDALR IVNAERRG + VELKPISTVM+SFL++MK+ GYIK++QV++P RVGRI
Sbjct: 1   MGRRILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRI 60

Query: 61  TVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNV 120
           TV+LQGR+ DCKA+TYRQD++AK+IE Y+ RTLPTRQWGYVVITTP+GILDHEEA+KRNV
Sbjct: 61  TVDLQGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNV 120

Query: 121 GGQVLGFFH 130
           GGQVLGFF+
Sbjct: 121 GGQVLGFFY 129

[Close]
BLAST of Chy3G053580 vs. TAIR 10
Match: AT1G07770.1 (ribosomal protein S15A )

HSP 1 Score: 141.7 bits (356), Expect = 4.0e-34
Identity = 63/125 (50.40%), Postives = 92/125 (73.60%), Query Frame = 0 

Query: 5   ILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRITVEL 64
           +LNDAL+++ NAE+RG   V ++P S V+  FL VM+ HGYI +++  +  R G+I VEL
Sbjct: 6   VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVEL 65

Query: 65  QGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNVGGQV 124
            GR+  C  I+ R D+  K+IE ++ R LP+RQ+GY+V+TT  GI+DHEEA ++NVGG+V
Sbjct: 66  NGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 125

Query: 125 LGFFH 130
           LGFF+
Sbjct: 126 LGFFY 130

[Close]
BLAST of Chy3G053580 vs. TAIR 10
Match: AT1G07770.2 (ribosomal protein S15A )

HSP 1 Score: 141.7 bits (356), Expect = 4.0e-34
Identity = 63/125 (50.40%), Postives = 92/125 (73.60%), Query Frame = 0 

Query: 5   ILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRITVEL 64
           +LNDAL+++ NAE+RG   V ++P S V+  FL VM+ HGYI +++  +  R G+I VEL
Sbjct: 6   VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVEL 65

Query: 65  QGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNVGGQV 124
            GR+  C  I+ R D+  K+IE ++ R LP+RQ+GY+V+TT  GI+DHEEA ++NVGG+V
Sbjct: 66  NGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 125

Query: 125 LGFFH 130
           LGFF+
Sbjct: 126 LGFFY 130

[Close]
BLAST of Chy3G053580 vs. TAIR 10
Match: AT5G59850.1 (Ribosomal protein S8 family protein )

HSP 1 Score: 141.7 bits (356), Expect = 4.0e-34
Identity = 63/125 (50.40%), Postives = 92/125 (73.60%), Query Frame = 0 

Query: 5   ILNDALRAIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRITVEL 64
           +LNDAL+++ NAE+RG   V ++P S V+  FL VM+ HGYI +++  +  R G+I VEL
Sbjct: 6   VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVEL 65

Query: 65  QGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNVGGQV 124
            GR+  C  I+ R D+  K+IE ++ R LP+RQ+GY+V+TT  GI+DHEEA ++NVGG+V
Sbjct: 66  NGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 125

Query: 125 LGFFH 130
           LGFF+
Sbjct: 126 LGFFY 130

The following BLAST results are available for this feature:
BLAST of Chy3G053580 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O822051.9e-5778.2940S ribosomal protein S15a-2 OS=Arabidopsis thaliana OX=3702 GN=RPS15AB PE=2 SV=... [more]
Q9M0E02.5e-5779.0740S ribosomal protein S15a-5 OS=Arabidopsis thaliana OX=3702 GN=RPS15AE PE=1 SV=... [more]
Q9AT344.4e-3350.4040S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3[more]
P427985.7e-3350.4040S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=... [more]
Q003325.7e-3350.4040S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3[more]
BLAST of Chy3G053580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDZ72.8e-6799.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G041710 PE=3 SV=1[more]
A0A5D3D2U55.9e-6596.1240S ribosomal protein S15a-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3BDC05.9e-6596.1240S ribosomal protein S15a-2-like OS=Cucumis melo OX=3656 GN=LOC103488655 PE=3 S... [more]
A0A6J1D9676.1e-6291.4740S ribosomal protein S15a-5-like isoform X2 OS=Momordica charantia OX=3673 GN=L... [more]
A0A6J1H6L48.8e-6188.3740S ribosomal protein S15a-2-like OS=Cucurbita moschata OX=3662 GN=LOC111460589 ... [more]
BLAST of Chy3G053580 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140873.13.50e-8899.2240S ribosomal protein S15a-2 [Cucumis sativus] >KGN45986.1 hypothetical protein ... [more]
XP_008445702.13.94e-8596.12PREDICTED: 40S ribosomal protein S15a-2-like [Cucumis melo] >KAA0033107.1 40S ri... [more]
XP_038884441.11.32e-8394.5740S ribosomal protein S15a-5-like [Benincasa hispida][more]
XP_022150338.13.64e-8191.4740S ribosomal protein S15a-5-like isoform X2 [Momordica charantia][more]
KAG6592876.14.26e-8089.1540S ribosomal protein S15a-5, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Chy3G053580 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G19720.11.4e-5878.29ribosomal protein S15A B [more]
AT4G29430.11.8e-5879.07ribosomal protein S15A E [more]
AT1G07770.14.0e-3450.40ribosomal protein S15A [more]
AT1G07770.24.0e-3450.40ribosomal protein S15A [more]
AT5G59850.14.0e-3450.40Ribosomal protein S8 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000630Ribosomal protein S8PFAMPF00410Ribosomal_S8coord: 6..127
e-value: 7.7E-22
score: 77.6
IPR000630Ribosomal protein S8PANTHERPTHR1175840S RIBOSOMAL PROTEIN S15Acoord: 1..129
NoneNo IPR availableGENE3D3.30.1490.10coord: 69..129
e-value: 7.0E-26
score: 91.7
NoneNo IPR availableGENE3D3.30.1370.30coord: 2..68
e-value: 8.5E-31
score: 107.6
NoneNo IPR availablePANTHERPTHR11758:SF2840S RIBOSOMAL PROTEIN S15A-2coord: 1..129
IPR035987Ribosomal protein S8 superfamilySUPERFAMILY56047Ribosomal protein S8coord: 3..128

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G053580.1Chy3G053580.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome