Chy3G053460 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G053460
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	ABC transporter C family member 2-like
Location	chrH03: 4997452 .. 4999019 (-)
RNA-Seq Expression	Chy3G053460
Synteny	Chy3G053460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCATCTTCGACTAACTCGTCGGCAACGCCTAAACACCATCTTATCACGGTATTTTCATTTTTTTTTTTTAAATCTTATTGATTATTGAATCGAAAAGTTGTGGTTCTTCAAGATTATATATCGCACGATACCTCTAATTTTCGATTCACATCTATGAGTGCTATTGTTTTGTTGGATATTATATGAAATTTACCCTGAGTCATCAACTTAAGCTTTTGGGTTGAATTGGTGATTTAACATGGTTTTCCATACTTTCATTTTGAATCCTACGATATGAATAATGTATCATACGATTTTAACAACATTGTCTGGGTGCACTCATTAATCAAGGATTAGTGTTGTCTCTTAATTGTACTACATTACCTTGTATTGTCTCATTTCATTATCTTAATGAAAGGACTTTTGTCCGTTTTCAAAAAAAAGAAAAAAAGTGTCTATGTGGTGTGTGTATATATATATTATGTTATTAGAAACCAAACTTCCATTGTGATAATATGAAAAAGTATGAAAGTCAACAAGAGCATATTAGAAATATAGTTATACATACGAAAGCTGTCCCAAAGTCAACTTTACAAGCAGGGGATCCAAGTCAAGGTAATTAGACCAAGAAGATTACTATAAATATTCTTAGAGACCGATGGTCAATCATACAATTACTTTTAGGTACACTTGTTATCTATAGAAACAACAAAACAAGAAAATGTTGTCAATTGTTTTATAGGCATGATGTAGTTTATTATCAAAGGAGAAAGAAACAAAGCAAACGAAGTCAGTTGAGCTACTTTCTTATCACACGTCTTTTTAAAATTTATATATTTAATATATTAATTGGGGTTTAACTACTTACATATCCCCGACGATCTCCATGAATTAAATTGTTGACAGCAACGATGGATAAGATGGCTCTCTTCCTCTACTACACTTCATAGTCTTGTTTTGTTATTTTTGAATATTCTTGGCGATGATTGTAATTTTTAAGTCTTTATTAAGTTATTTGTAAGTTCCTTTTTGGAGGTGATGATGGTGCTAAGGGGTGTCAACCTAGTTGAGATATTCGAGTAAACCTCCTGATATGTAGCTTTATGCTTGTTGTTTCCATTATACTTTGAGCATTAGTCTCATATCATTATCTTAACGAAGAGACTTGTTTCTTGCTCAACAAACATATCCCCAACAATCTTCTCTCAGTTGAGTTAGTAACCACATTGATAGAAGTTTGCCTACAGAATGGCTTAGTTCCAAGGAGATAGTTTTTATTGAATTGGGGATTCTTTTTTGGATAACAGTTTTTCATTTTGACATATTTTTCTTTATACTACTTTCTAATGGTTCAATTTTTCATTTGTGTTATTTTTTTAAACTAGGTCGAGAAACCCACGTTATCGAACATCAATTTGGACATACCGGTTGGTAGCTTAATCGCAATTGTTGGAAGTACAGGAGAAGGAAAGACATCACTCGTGTCAGCAATGCTTGGAGAAATTCCATCAGTTGCAGATTCTAATGTTGTTATTCGGGGAAGTGTTGCATATGTTCCACAAGTTGCGTGGATTTATAATGCTACA

mRNA sequence

TTTTCATCTTCGACTAACTCGTCGGCAACGCCTAAACACCATCTTATCACGGTCGAGAAACCCACGTTATCGAACATCAATTTGGACATACCGGTTGGTAGCTTAATCGCAATTGTTGGAAGTACAGGAGAAGGAAAGACATCACTCGTGTCAGCAATGCTTGGAGAAATTCCATCAGTTGCAGATTCTAATGTTGTTATTCGGGGAAGTGTTGCATATGTTCCACAAGTTGCGTGGATTTATAATGCTACA

Coding sequence (CDS)

TTTTCATCTTCGACTAACTCGTCGGCAACGCCTAAACACCATCTTATCACGGTCGAGAAACCCACGTTATCGAACATCAATTTGGACATACCGGTTGGTAGCTTAATCGCAATTGTTGGAAGTACAGGAGAAGGAAAGACATCACTCGTGTCAGCAATGCTTGGAGAAATTCCATCAGTTGCAGATTCTAATGTTGTTATTCGGGGAAGTGTTGCATATGTTCCACAAGTTGCGTGGATTTATAATGCTACA

Protein sequence

FSSSTNSSATPKHHLITVEKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVAWIYNAT

Homology

[Close]

BLAST of Chy3G053460 vs. ExPASy Swiss-Prot
Match: Q9C8G9 (ABC transporter C family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCC1 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.5e-23
Identity = 50/66 (75.76%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 19  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVA 78
           ++PTLSNINLDIP+GSL+A+VGSTGEGKTSL+SAMLGE+P+ +D+ V +RGSVAYVPQV+
Sbjct: 628 DRPTLSNINLDIPLGSLVAVVGSTGEGKTSLISAMLGELPARSDATVTLRGSVAYVPQVS 687

Query: 79  WIYNAT 85
           WI+NAT
Sbjct: 688 WIFNAT 693

[Close]

BLAST of Chy3G053460 vs. ExPASy Swiss-Prot
Match: Q42093 (ABC transporter C family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCC2 PE=1 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-22
Identity = 48/66 (72.73%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 19  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVA 78
           ++PTLSNINLD+P+GSL+A+VGSTGEGKTSL+SA+LGE+P+ +D+ V +RGSVAYVPQV+
Sbjct: 628 DRPTLSNINLDVPLGSLVAVVGSTGEGKTSLISAILGELPATSDAIVTLRGSVAYVPQVS 687

Query: 79  WIYNAT 85
           WI+NAT
Sbjct: 688 WIFNAT 693

[Close]

BLAST of Chy3G053460 vs. ExPASy Swiss-Prot
Match: Q9C8H0 (ABC transporter C family member 12 OS=Arabidopsis thaliana OX=3702 GN=ABCC12 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 9.4e-21
Identity = 49/65 (75.38%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 20  KPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVAW 79
           KPTLS+INL+IPVG+L+AIVG TGEGKTSL+SAMLGE+     ++VVIRGSVAYVPQV+W
Sbjct: 630 KPTLSDINLEIPVGTLVAIVGGTGEGKTSLISAMLGELSHAETTSVVIRGSVAYVPQVSW 689

Query: 80  IYNAT 85
           I+NAT
Sbjct: 690 IFNAT 694

[Close]

BLAST of Chy3G053460 vs. ExPASy Swiss-Prot
Match: Q9C8H1 (ABC transporter C family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCC11 PE=2 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-20
Identity = 50/65 (76.92%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 20  KPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVAW 79
           KPTLS+INL+IPVGSL+AIVG TGEGKTSL+SAMLGE+     S+V IRGSVAYVPQV+W
Sbjct: 630 KPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVDIRGSVAYVPQVSW 689

Query: 80  IYNAT 85
           I+NAT
Sbjct: 690 IFNAT 694

[Close]

BLAST of Chy3G053460 vs. ExPASy Swiss-Prot
Match: Q5F364 (Multidrug resistance-associated protein 1 OS=Gallus gallus OX=9031 GN=ABCC1 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 9.4e-13
Identity = 37/66 (56.06%), Postives = 51/66 (77.27%), Query Frame = 0


Query: 19  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVA 78
           + P+L++IN  +P GSLIA+VG  G GK+SL+SA+LGE+    +  VV++GS+AYVPQ A
Sbjct: 654 DPPSLNSINFTVPEGSLIAVVGQVGCGKSSLLSALLGEMDK-KEGYVVVKGSIAYVPQQA 713

Query: 79  WIYNAT 85
           WI NAT
Sbjct: 714 WIQNAT 718

[Close]

BLAST of Chy3G053460 vs. ExPASy TrEMBL
Match: A0A6J1IAT6 (ABC transporter C family member 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471790 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-24
Identity = 60/66 (90.91%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 19  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVA 78
           EKPTLSNINLDIPVGSL+AIVGSTGEGKTSL+SAMLGE+P VADS+V+IRGSVAYVPQVA
Sbjct: 629 EKPTLSNINLDIPVGSLVAIVGSTGEGKTSLISAMLGELPPVADSSVIIRGSVAYVPQVA 688

Query: 79  WIYNAT 85
           WIYNAT
Sbjct: 689 WIYNAT 694

[Close]

BLAST of Chy3G053460 vs. ExPASy TrEMBL
Match: A0A6J1ICF0 (ABC transporter C family member 2-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111471790 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-24
Identity = 60/66 (90.91%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 19  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVA 78
           EKPTLSNINLDIPVGSL+AIVGSTGEGKTSL+SAMLGE+P VADS+V+IRGSVAYVPQVA
Sbjct: 433 EKPTLSNINLDIPVGSLVAIVGSTGEGKTSLISAMLGELPPVADSSVIIRGSVAYVPQVA 492

Query: 79  WIYNAT 85
           WIYNAT
Sbjct: 493 WIYNAT 498

[Close]

BLAST of Chy3G053460 vs. ExPASy TrEMBL
Match: A0A6J1I6Y7 (ABC transporter C family member 2-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111471790 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-24
Identity = 60/66 (90.91%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 19  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVA 78
           EKPTLSNINLDIPVGSL+AIVGSTGEGKTSL+SAMLGE+P VADS+V+IRGSVAYVPQVA
Sbjct: 629 EKPTLSNINLDIPVGSLVAIVGSTGEGKTSLISAMLGELPPVADSSVIIRGSVAYVPQVA 688

Query: 79  WIYNAT 85
           WIYNAT
Sbjct: 689 WIYNAT 694

[Close]

BLAST of Chy3G053460 vs. ExPASy TrEMBL
Match: A0A6J1I830 (ABC transporter C family member 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471790 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-24
Identity = 60/66 (90.91%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 19  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVA 78
           EKPTLSNINLDIPVGSL+AIVGSTGEGKTSL+SAMLGE+P VADS+V+IRGSVAYVPQVA
Sbjct: 591 EKPTLSNINLDIPVGSLVAIVGSTGEGKTSLISAMLGELPPVADSSVIIRGSVAYVPQVA 650

Query: 79  WIYNAT 85
           WIYNAT
Sbjct: 651 WIYNAT 656

[Close]

BLAST of Chy3G053460 vs. ExPASy TrEMBL
Match: A0A6J1EYD7 (ABC transporter C family member 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439554 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.5e-24
Identity = 59/66 (89.39%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 19  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVA 78
           EKPTLSNINLDIPVGSL+AIVGSTGEGKTSL+SAMLGE+P VADS+V+IRGSVAYVPQ+A
Sbjct: 591 EKPTLSNINLDIPVGSLVAIVGSTGEGKTSLISAMLGELPPVADSSVIIRGSVAYVPQIA 650

Query: 79  WIYNAT 85
           WIYNAT
Sbjct: 651 WIYNAT 656

[Close]

BLAST of Chy3G053460 vs. NCBI nr
Match: XP_011656526.1 (ABC transporter C family member 2 [Cucumis sativus] >XP_031743698.1 ABC transporter C family member 2 [Cucumis sativus] >KAE8646615.1 hypothetical protein Csa_004851 [Cucumis sativus])

HSP 1 Score: 125 bits (315), Expect = 2.83e-31
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 16  ITVEKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVP 75
           +  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADS+VVIRGSVAYVP
Sbjct: 626 LKAEKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSSVVIRGSVAYVP 685

Query: 76  QVAWIYNAT 84
           QVAWIYNAT
Sbjct: 686 QVAWIYNAT 694

[Close]

BLAST of Chy3G053460 vs. NCBI nr
Match: XP_022973223.1 (ABC transporter C family member 2-like isoform X4 [Cucurbita maxima])

HSP 1 Score: 121 bits (304), Expect = 8.63e-30
Identity = 60/66 (90.91%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 19  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVA 78
           EKPTLSNINLDIPVGSL+AIVGSTGEGKTSL+SAMLGE+P VADS+V+IRGSVAYVPQVA
Sbjct: 433 EKPTLSNINLDIPVGSLVAIVGSTGEGKTSLISAMLGELPPVADSSVIIRGSVAYVPQVA 492

Query: 79  WIYNAT 84
           WIYNAT
Sbjct: 493 WIYNAT 498

[Close]

BLAST of Chy3G053460 vs. NCBI nr
Match: XP_022973222.1 (ABC transporter C family member 2-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 121 bits (304), Expect = 8.64e-30
Identity = 60/66 (90.91%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 19  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVA 78
           EKPTLSNINLDIPVGSL+AIVGSTGEGKTSL+SAMLGE+P VADS+V+IRGSVAYVPQVA
Sbjct: 629 EKPTLSNINLDIPVGSLVAIVGSTGEGKTSLISAMLGELPPVADSSVIIRGSVAYVPQVA 688

Query: 79  WIYNAT 84
           WIYNAT
Sbjct: 689 WIYNAT 694

[Close]

BLAST of Chy3G053460 vs. NCBI nr
Match: XP_022973221.1 (ABC transporter C family member 2-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 121 bits (304), Expect = 8.65e-30
Identity = 60/66 (90.91%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 19  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVA 78
           EKPTLSNINLDIPVGSL+AIVGSTGEGKTSL+SAMLGE+P VADS+V+IRGSVAYVPQVA
Sbjct: 591 EKPTLSNINLDIPVGSLVAIVGSTGEGKTSLISAMLGELPPVADSSVIIRGSVAYVPQVA 650

Query: 79  WIYNAT 84
           WIYNAT
Sbjct: 651 WIYNAT 656

[Close]

BLAST of Chy3G053460 vs. NCBI nr
Match: XP_022973219.1 (ABC transporter C family member 2-like isoform X1 [Cucurbita maxima] >XP_022973220.1 ABC transporter C family member 2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 121 bits (304), Expect = 8.65e-30
Identity = 60/66 (90.91%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 19  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVA 78
           EKPTLSNINLDIPVGSL+AIVGSTGEGKTSL+SAMLGE+P VADS+V+IRGSVAYVPQVA
Sbjct: 629 EKPTLSNINLDIPVGSLVAIVGSTGEGKTSLISAMLGELPPVADSSVIIRGSVAYVPQVA 688

Query: 79  WIYNAT 84
           WIYNAT
Sbjct: 689 WIYNAT 694

[Close]

BLAST of Chy3G053460 vs. TAIR 10
Match: AT1G30400.1 (multidrug resistance-associated protein 1 )

HSP 1 Score: 108.2 bits (269), Expect = 3.2e-24
Identity = 50/66 (75.76%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 19  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVA 78
           ++PTLSNINLDIP+GSL+A+VGSTGEGKTSL+SAMLGE+P+ +D+ V +RGSVAYVPQV+
Sbjct: 628 DRPTLSNINLDIPLGSLVAVVGSTGEGKTSLISAMLGELPARSDATVTLRGSVAYVPQVS 687

Query: 79  WIYNAT 85
           WI+NAT
Sbjct: 688 WIFNAT 693

[Close]

BLAST of Chy3G053460 vs. TAIR 10
Match: AT1G30400.2 (multidrug resistance-associated protein 1 )

HSP 1 Score: 108.2 bits (269), Expect = 3.2e-24
Identity = 50/66 (75.76%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 19  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVA 78
           ++PTLSNINLDIP+GSL+A+VGSTGEGKTSL+SAMLGE+P+ +D+ V +RGSVAYVPQV+
Sbjct: 628 DRPTLSNINLDIPLGSLVAVVGSTGEGKTSLISAMLGELPARSDATVTLRGSVAYVPQVS 687

Query: 79  WIYNAT 85
           WI+NAT
Sbjct: 688 WIFNAT 693

[Close]

BLAST of Chy3G053460 vs. TAIR 10
Match: AT2G34660.1 (multidrug resistance-associated protein 2 )

HSP 1 Score: 106.3 bits (264), Expect = 1.2e-23
Identity = 48/66 (72.73%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 19  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVA 78
           ++PTLSNINLD+P+GSL+A+VGSTGEGKTSL+SA+LGE+P+ +D+ V +RGSVAYVPQV+
Sbjct: 628 DRPTLSNINLDVPLGSLVAVVGSTGEGKTSLISAILGELPATSDAIVTLRGSVAYVPQVS 687

Query: 79  WIYNAT 85
           WI+NAT
Sbjct: 688 WIFNAT 693

[Close]

BLAST of Chy3G053460 vs. TAIR 10
Match: AT2G34660.2 (multidrug resistance-associated protein 2 )

HSP 1 Score: 106.3 bits (264), Expect = 1.2e-23
Identity = 48/66 (72.73%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 19  EKPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVA 78
           ++PTLSNINLD+P+GSL+A+VGSTGEGKTSL+SA+LGE+P+ +D+ V +RGSVAYVPQV+
Sbjct: 628 DRPTLSNINLDVPLGSLVAVVGSTGEGKTSLISAILGELPATSDAIVTLRGSVAYVPQVS 687

Query: 79  WIYNAT 85
           WI+NAT
Sbjct: 688 WIFNAT 693

[Close]

BLAST of Chy3G053460 vs. TAIR 10
Match: AT1G30410.1 (multidrug resistance-associated protein 13 )

HSP 1 Score: 100.5 bits (249), Expect = 6.7e-22
Identity = 49/65 (75.38%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 20  KPTLSNINLDIPVGSLIAIVGSTGEGKTSLVSAMLGEIPSVADSNVVIRGSVAYVPQVAW 79
           KPTLS+INL+IPVG+L+AIVG TGEGKTSL+SAMLGE+     ++VVIRGSVAYVPQV+W
Sbjct: 603 KPTLSDINLEIPVGTLVAIVGGTGEGKTSLISAMLGELSHAETTSVVIRGSVAYVPQVSW 662

Query: 80  IYNAT 85
           I+NAT
Sbjct: 663 IFNAT 667

The following BLAST results are available for this feature:

BLAST of Chy3G053460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8G9	4.5e-23	75.76	ABC transporter C family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCC1 PE=1 ...	[more]
Q42093	1.7e-22	72.73	ABC transporter C family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCC2 PE=1 ...	[more]
Q9C8H0	9.4e-21	75.38	ABC transporter C family member 12 OS=Arabidopsis thaliana OX=3702 GN=ABCC12 PE=...	[more]
Q9C8H1	1.2e-20	76.92	ABC transporter C family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCC11 PE=...	[more]
Q5F364	9.4e-13	56.06	Multidrug resistance-associated protein 1 OS=Gallus gallus OX=9031 GN=ABCC1 PE=2...	[more]

BLAST of Chy3G053460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IAT6	1.9e-24	90.91	ABC transporter C family member 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1ICF0	1.9e-24	90.91	ABC transporter C family member 2-like isoform X4 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1I6Y7	1.9e-24	90.91	ABC transporter C family member 2-like isoform X3 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1I830	1.9e-24	90.91	ABC transporter C family member 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1EYD7	2.5e-24	89.39	ABC transporter C family member 2-like isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of Chy3G053460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656526.1	2.83e-31	94.20	ABC transporter C family member 2 [Cucumis sativus] >XP_031743698.1 ABC transpor...	[more]
XP_022973223.1	8.63e-30	90.91	ABC transporter C family member 2-like isoform X4 [Cucurbita maxima]	[more]
XP_022973222.1	8.64e-30	90.91	ABC transporter C family member 2-like isoform X3 [Cucurbita maxima]	[more]
XP_022973221.1	8.65e-30	90.91	ABC transporter C family member 2-like isoform X2 [Cucurbita maxima]	[more]
XP_022973219.1	8.65e-30	90.91	ABC transporter C family member 2-like isoform X1 [Cucurbita maxima] >XP_0229732...	[more]

BLAST of Chy3G053460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30400.1	3.2e-24	75.76	multidrug resistance-associated protein 1	[more]
AT1G30400.2	3.2e-24	75.76	multidrug resistance-associated protein 1	[more]
AT2G34660.1	1.2e-23	72.73	multidrug resistance-associated protein 2	[more]
AT2G34660.2	1.2e-23	72.73	multidrug resistance-associated protein 2	[more]
AT1G30410.1	6.7e-22	75.38	multidrug resistance-associated protein 13	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003439	ABC transporter-like, ATP-binding domain	PFAM	PF00005	ABC_tran	coord: 23..59 e-value: 6.9E-7 score: 29.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 3..84 e-value: 1.2E-15 score: 59.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 18..82
None	No IPR available	PANTHER	PTHR24223	ATP-BINDING CASSETTE SUB-FAMILY C	coord: 18..84
None	No IPR available	PANTHER	PTHR24223:SF375	ABC TRANSPORTER C FAMILY MEMBER 11-RELATED	coord: 18..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G053460.1	Chy3G053460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding