Chy3G052960 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAAAGTCAACAGTTCATTATGAAGTTAAATGTGGGATGTTGCAGGTGTCAAGTATGGGATGTTGAGGAAATTTCATGTGCATATGCGCTTGCTATTCTACGAATGCTTAATTTAGATACATATTCATATGTATTTGAGTTTTATTATACAGAAATGATATTAGAAACATACAGTGGTTGCATTCATCTTGTTGGCACTCATTTGTATTGGAGAGTTGAAGATGCTGTTCAGAAAGCATTACATCCAGTCTTTAAATTATGTCAAGCTAGAAAACCAAGAAAACAAAGAATTTCATATGTAGGCGAAAGTAATAGTTCATTAAGATGTTTCAACTGTAATCATAAAGGACACAATAGTAGGACTTGCAAAGTTTAA ATGGATGAAAGTCAACAGTTCATTATGAAGTTAAATGTGGGATGTTGCAGGTGTCAAGTATGGGATGTTGAGGAAATTTCATGTGCATATGCGCTTGCTATTCTACGAATGCTTAATTTAGATACATATTCATATGTATTTGAGTTTTATTATACAGAAATGATATTAGAAACATACAGTGGTTGCATTCATCTTGTTGGCACTCATTTGTATTGGAGAGTTGAAGATGCTGTTCAGAAAGCATTACATCCAGTCTTTAAATTATGTCAAGCTAGAAAACCAAGAAAACAAAGAATTTCATATGTAGGCGAAAGTAATAGTTCATTAAGATGTTTCAACTGTAATCATAAAGGACACAATAGTAGGACTTGCAAAGTTTAA ATGGATGAAAGTCAACAGTTCATTATGAAGTTAAATGTGGGATGTTGCAGGTGTCAAGTATGGGATGTTGAGGAAATTTCATGTGCATATGCGCTTGCTATTCTACGAATGCTTAATTTAGATACATATTCATATGTATTTGAGTTTTATTATACAGAAATGATATTAGAAACATACAGTGGTTGCATTCATCTTGTTGGCACTCATTTGTATTGGAGAGTTGAAGATGCTGTTCAGAAAGCATTACATCCAGTCTTTAAATTATGTCAAGCTAGAAAACCAAGAAAACAAAGAATTTCATATGTAGGCGAAAGTAATAGTTCATTAAGATGTTTCAACTGTAATCATAAAGGACACAATAGTAGGACTTGCAAAGTTTAA MDESQQFIMKLNVGCCRCQVWDVEEISCAYALAILRMLNLDTYSYVFEFYYTEMILETYSGCIHLVGTHLYWRVEDAVQKALHPVFKLCQARKPRKQRISYVGESNSSLRCFNCNHKGHNSRTCKV* Homology
BLAST of Chy3G052960 vs. ExPASy TrEMBL
Match: A0A5D3C7L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00780 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.9e-39 Identity = 84/122 (68.85%), Postives = 95/122 (77.87%), Query Frame = 0
BLAST of Chy3G052960 vs. ExPASy TrEMBL
Match: A0A5D3CZ48 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1327G00160 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 5.4e-23 Identity = 53/125 (42.40%), Postives = 78/125 (62.40%), Query Frame = 0
BLAST of Chy3G052960 vs. ExPASy TrEMBL
Match: A0A5A7V6N4 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001490 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 9.2e-23 Identity = 52/124 (41.94%), Postives = 76/124 (61.29%), Query Frame = 0
BLAST of Chy3G052960 vs. ExPASy TrEMBL
Match: A0A5D3BVP4 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00470 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.6e-22 Identity = 52/125 (41.60%), Postives = 77/125 (61.60%), Query Frame = 0
BLAST of Chy3G052960 vs. ExPASy TrEMBL
Match: A0A5A7SVB1 (ZnF_PMZ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00530 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 3.5e-22 Identity = 52/124 (41.94%), Postives = 75/124 (60.48%), Query Frame = 0
BLAST of Chy3G052960 vs. NCBI nr
Match: TYK07957.1 (hypothetical protein E5676_scaffold265G00780 [Cucumis melo var. makuwa]) HSP 1 Score: 173 bits (439), Expect = 1.27e-50 Identity = 84/122 (68.85%), Postives = 95/122 (77.87%), Query Frame = 0
BLAST of Chy3G052960 vs. NCBI nr
Match: XP_038904248.1 (uncharacterized protein LOC120090597 [Benincasa hispida]) HSP 1 Score: 140 bits (354), Expect = 1.16e-37 Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = 0
BLAST of Chy3G052960 vs. NCBI nr
Match: XP_038896605.1 (uncharacterized protein LOC120084863 [Benincasa hispida]) HSP 1 Score: 141 bits (356), Expect = 3.38e-36 Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = 0
BLAST of Chy3G052960 vs. NCBI nr
Match: XP_011654398.1 (uncharacterized protein LOC105435382 [Cucumis sativus]) HSP 1 Score: 123 bits (308), Expect = 6.85e-32 Identity = 59/124 (47.58%), Postives = 85/124 (68.55%), Query Frame = 0
BLAST of Chy3G052960 vs. NCBI nr
Match: TYK15459.1 (uncharacterized protein E5676_scaffold477G00290 [Cucumis melo var. makuwa] >TYK17070.1 uncharacterized protein E5676_scaffold1327G00160 [Cucumis melo var. makuwa] >TYK19773.1 uncharacterized protein E5676_scaffold1676G00100 [Cucumis melo var. makuwa]) HSP 1 Score: 118 bits (296), Expect = 1.80e-30 Identity = 53/125 (42.40%), Postives = 78/125 (62.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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